Csor.00g114780 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g114780
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	DNA-directed RNA polymerase subunit beta
Location	Csor_Chr07: 1163844 .. 1164609 (+)
RNA-Seq Expression	Csor.00g114780
Synteny	Csor.00g114780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATTATTTGTAACAAGCAATTAGATTGTTGTCTTTTTATTCTGTATCATAATTCTGAGAAGGATCTTGCCGAGCTTAGGGAGTGTCCATATGACCAGGGAGGATATTTTATCATCAATGAGAGTGAGAAGGTTCTTATTGCACAAGAGAAAATGTGCATAAAATATGTTTCCAAAAAAGGACAGCCAAACAAGTACGCCTTTGTGGAAGACGTCTGGTCTATGGCTGAGTCACAAAATAGACCACCTAATACCATGTTTGCACACAAATGCTTTCTTGAACTAGTGCCAAGGGGGTAATGTACTTATCTTCGTCTTCTGAAGATTTAGAAGTTCTTCCTCGTTGAAGTAAAAGCTATTCTAACCTATTCTTTTTGCAATTCGTCAATGTTCTTTCAGGTCTTCAGGACAATACATACATGCCACTCTGCCTGAAACCCGAACTGAGATTATGATTATTGTTGTGTTTCGTGCTCGAGGATTTGTTCCTGATAAAGATCTTCTAGAGCATGTATGTTATGAATTCTTTGATACTCAAATGATGGAGTTGCTTCAGTCTTCTCTGGAAGAGGCTTTTGTTATACCAAATCAGCAGGTCACCCATTTCTTTGATACTTGTCTATCATCCTGTTCTTTCTCTCTCTCTCATGCTCACACCAACAATGTTTCTTGACTGTAGGTTGCACTAGGCCATATTGGGAAGAGAGGATCAACAGTTGGTGTGACCAAGGAAAAGAGGATTAAGTATGCATTATCTCAATAA

mRNA sequence

ATGGAAATTATTTGTAACAAGCAATTAGATTGTTGTCTTTTTATTCTGTATCATAATTCTGAGAAGGATCTTGCCGAGCTTAGGGAGTGTCCATATGACCAGGGAGGATATTTTATCATCAATGAGAGTGAGAAGGTTCTTATTGCACAAGAGAAAATGTGCATAAAATATGTTTCCAAAAAAGGACAGCCAAACAAGTACGCCTTTGTGGAAGACGTCTGGTCTATGGCTGAGTCACAAAATAGACCACCTAATACCATGTTTGCACACAAATGCTTTCTTGAACTAGTGCCAAGGGGGTCTTCAGGACAATACATACATGCCACTCTGCCTGAAACCCGAACTGAGATTATGATTATTGTTGTGTTTCGTGCTCGAGGATTTGTTCCTGATAAAGATCTTCTAGAGCATGTATGTTATGAATTCTTTGATACTCAAATGATGGAGTTGCTTCAGTCTTCTCTGGAAGAGGCTTTTGTTATACCAAATCAGCAGGTTGCACTAGGCCATATTGGGAAGAGAGGATCAACAGTTGGTGTGACCAAGGAAAAGAGGATTAAGTATGCATTATCTCAATAA

Coding sequence (CDS)

ATGGAAATTATTTGTAACAAGCAATTAGATTGTTGTCTTTTTATTCTGTATCATAATTCTGAGAAGGATCTTGCCGAGCTTAGGGAGTGTCCATATGACCAGGGAGGATATTTTATCATCAATGAGAGTGAGAAGGTTCTTATTGCACAAGAGAAAATGTGCATAAAATATGTTTCCAAAAAAGGACAGCCAAACAAGTACGCCTTTGTGGAAGACGTCTGGTCTATGGCTGAGTCACAAAATAGACCACCTAATACCATGTTTGCACACAAATGCTTTCTTGAACTAGTGCCAAGGGGGTCTTCAGGACAATACATACATGCCACTCTGCCTGAAACCCGAACTGAGATTATGATTATTGTTGTGTTTCGTGCTCGAGGATTTGTTCCTGATAAAGATCTTCTAGAGCATGTATGTTATGAATTCTTTGATACTCAAATGATGGAGTTGCTTCAGTCTTCTCTGGAAGAGGCTTTTGTTATACCAAATCAGCAGGTTGCACTAGGCCATATTGGGAAGAGAGGATCAACAGTTGGTGTGACCAAGGAAAAGAGGATTAAGTATGCATTATCTCAATAA

Protein sequence

MEIICNKQLDCCLFILYHNSEKDLAELRECPYDQGGYFIINESEKVLIAQEKMCIKYVSKKGQPNKYAFVEDVWSMAESQNRPPNTMFAHKCFLELVPRGSSGQYIHATLPETRTEIMIIVVFRARGFVPDKDLLEHVCYEFFDTQMMELLQSSLEEAFVIPNQQVALGHIGKRGSTVGVTKEKRIKYALSQ

Homology

[Close]

BLAST of Csor.00g114780 vs. ExPASy Swiss-Prot
Match: Q42877 (DNA-directed RNA polymerase II subunit RPB2 OS=Solanum lycopersicum OX=4081 GN=RPB2 PE=2 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.7e-65
Identity = 129/176 (73.30%), Postives = 141/176 (80.11%), Query Frame = 0


Query: 16  LYHNSEKDLAELRECPYDQGGYFIINESEKVLIAQEKMCIK--YVSKKGQPNKYAFVEDV 75
           LY NSEKDL EL ECP DQGGYFIIN SEKVLIAQEKM     YV KK QPNKYAFV +V
Sbjct: 168 LYQNSEKDLTELGECPLDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEV 227

Query: 76  WSMAESQNRPPNTMFAHKCFLELVPRGSSGQYIHATLPETRTEIMIIVVFRARGFVPDKD 135
            SMA++QNRPP+TMF           GSSGQYI ATLP  RTEI II+VFRA GFV DKD
Sbjct: 228 RSMADTQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKD 287

Query: 136 LLEHVCYEFFDTQMMELLQSSLEEAFVIPNQQVALGHIGKRGSTVGVTKEKRIKYA 190
           +LEH+CY+F DTQMMELL+ SLEEAFVI NQQVAL +IGKRG+TVGVT+EKRIKYA
Sbjct: 288 ILEHICYDFNDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYA 343

[Close]

BLAST of Csor.00g114780 vs. ExPASy Swiss-Prot
Match: P38420 (DNA-directed RNA polymerase II subunit 2 OS=Arabidopsis thaliana OX=3702 GN=NRPB2 PE=1 SV=2)

HSP 1 Score: 248.8 bits (634), Expect = 4.9e-65
Identity = 128/176 (72.73%), Postives = 140/176 (79.55%), Query Frame = 0


Query: 16  LYHNSEKDLAELRECPYDQGGYFIINESEKVLIAQEKMCIK--YVSKKGQPNKYAFVEDV 75
           L+ NSEKDL EL ECPYDQGGYFIIN SEKVLIAQEKM     YV KK QPNKYA+V +V
Sbjct: 169 LFQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEV 228

Query: 76  WSMAESQNRPPNTMFAHKCFLELVPRGSSGQYIHATLPETRTEIMIIVVFRARGFVPDKD 135
            SMAE+QNRPP+TMF           GSSGQYI  TLP  RTEI II+VFRA GFV DKD
Sbjct: 229 RSMAENQNRPPSTMFVRMLARASAKGGSSGQYIRCTLPYIRTEIPIIIVFRALGFVADKD 288

Query: 136 LLEHVCYEFFDTQMMELLQSSLEEAFVIPNQQVALGHIGKRGSTVGVTKEKRIKYA 190
           +LEH+CY+F DTQMMELL+ SLEEAFVI NQ VAL +IGKRG+TVGVTKEKRIKYA
Sbjct: 289 ILEHICYDFADTQMMELLRPSLEEAFVIQNQLVALDYIGKRGATVGVTKEKRIKYA 344

[Close]

BLAST of Csor.00g114780 vs. ExPASy Swiss-Prot
Match: Q54J75 (DNA-directed RNA polymerase II subunit rpb2 OS=Dictyostelium discoideum OX=44689 GN=polr2b PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 4.0e-43
Identity = 92/177 (51.98%), Postives = 128/177 (72.32%), Query Frame = 0


Query: 15  ILYHNSEKDLAELRECPYDQGGYFIINESEKVLIAQEKMCIK--YVSKKGQPNKYAFVED 74
           +L    ++DL  + EC +DQGGYFIIN SEKVLIAQEKM     YV KK  P+KY++V +
Sbjct: 166 MLNEADDRDLTTMGECSFDQGGYFIINGSEKVLIAQEKMNNNHVYVFKKSPPSKYSYVAE 225

Query: 75  VWSMAESQNRPPNTMFAHKCFLELVPRGSSGQYIHATLPETRTEIMIIVVFRARGFVPDK 134
           + S  E+ +RP +TM+     L    +G  G  I AT+P  + ++ +I+VFRA GFV DK
Sbjct: 226 IRSCQETGSRPTSTMYLK--MLHNTNKGPVG--IKATVPYIKQDVPVIIVFRALGFVADK 285

Query: 135 DLLEHVCYEFFDTQMMELLQSSLEEAFVIPNQQVALGHIGKRGSTVGVTKEKRIKYA 190
           D+LEH+CY+F D QMM+L++ SLEE+FVI +Q+VAL ++GKRGST+G T+E+RIK+A
Sbjct: 286 DILEHICYDFKDAQMMDLMRPSLEESFVIQSQEVALDYLGKRGSTMG-TREQRIKFA 337

[Close]

BLAST of Csor.00g114780 vs. ExPASy Swiss-Prot
Match: Q02061 (DNA-directed RNA polymerase II subunit RPB2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpb2 PE=1 SV=2)

HSP 1 Score: 171.0 bits (432), Expect = 1.3e-41
Identity = 91/179 (50.84%), Postives = 127/179 (70.95%), Query Frame = 0


Query: 15  ILYHNSEKDLAELRECPYDQGGYFIINESEKVLIAQEKMC--IKYVSKKGQPNKYAFVED 74
           IL   S+ +L +L ECPYDQGGYFIIN SEKV+IAQE+    I  V KK  P+  A+V +
Sbjct: 165 ILNGVSDSELYDLNECPYDQGGYFIINGSEKVIIAQERSAANIVQVFKKAAPSPIAYVAE 224

Query: 75  VWSMAESQNRPPNTMFAHKCFLELVPRG--SSGQYIHATLPETRTEIMIIVVFRARGFVP 134
           + S  E  +R  ++M      ++L+ R   +SGQ I ATLP  R++I I++VFRA G VP
Sbjct: 225 IRSALERGSRLISSM-----QIKLMARNTENSGQTIRATLPYIRSDIPIVIVFRALGVVP 284

Query: 135 DKDLLEHVCYEFFDTQMMELLQSSLEEAFVIPNQQVALGHIGKRGSTVGVTKEKRIKYA 190
           D+D+LEH+CY+  D QM+E+++  +EEAFVI ++ +AL +IGKRGST GVT+EKR++YA
Sbjct: 285 DRDILEHICYDPNDFQMLEMMKPCIEEAFVIQDKDIALDYIGKRGSTTGVTREKRLRYA 338

[Close]

BLAST of Csor.00g114780 vs. ExPASy Swiss-Prot
Match: P30876 (DNA-directed RNA polymerase II subunit RPB2 OS=Homo sapiens OX=9606 GN=POLR2B PE=1 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 8.4e-41
Identity = 93/179 (51.96%), Postives = 121/179 (67.60%), Query Frame = 0


Query: 20  SEKDLAELRECPYDQGGYFIINESEKVLIAQEKMCIK--YVSKKGQPNKYAFVEDVWSMA 79
           +++DL EL ECP D GGYFIIN SEKVLIAQEKM     YV  K + +KYA+  +  S  
Sbjct: 167 TDRDLCELNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFAK-KDSKYAYTGECRSCL 226

Query: 80  ESQNRPPNTMFAHKCFLELVPRGSS-------GQYIHATLPETRTEIMIIVVFRARGFVP 139
           E+ +RP +T+     ++ ++ RG         GQ I ATLP  + E+ II+VFRA GFV 
Sbjct: 227 ENSSRPTSTI-----WVSMLARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVS 286

Query: 140 DKDLLEHVCYEFFDTQMMELLQSSLEEAFVIPNQQVALGHIGKRGSTVGVTKEKRIKYA 190
           D+D+LEH+ Y+F D +MME+++ SL+EAFVI  Q VAL  IG RG+  GVTKEKRIKYA
Sbjct: 287 DRDILEHIIYDFEDPEMMEMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYA 339

[Close]

BLAST of Csor.00g114780 vs. NCBI nr
Match: KAG6594604.1 (DNA-directed RNA polymerase II subunit RPB2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 394 bits (1013), Expect = 1.36e-138
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MEIICNKQLDCCLFILYHNSEKDLAELRECPYDQGGYFIINESEKVLIAQEKMCIKYVSK 60
           MEIICNKQLDCCLFILYHNSEKDLAELRECPYDQGGYFIINESEKVLIAQEKMCIKYVSK
Sbjct: 1   MEIICNKQLDCCLFILYHNSEKDLAELRECPYDQGGYFIINESEKVLIAQEKMCIKYVSK 60

Query: 61  KGQPNKYAFVEDVWSMAESQNRPPNTMFAHKCFLELVPRGSSGQYIHATLPETRTEIMII 120
           KGQPNKYAFVEDVWSMAESQNRPPNTMFAHKCFLELVPRGSSGQYIHATLPETRTEIMII
Sbjct: 61  KGQPNKYAFVEDVWSMAESQNRPPNTMFAHKCFLELVPRGSSGQYIHATLPETRTEIMII 120

Query: 121 VVFRARGFVPDKDLLEHVCYEFFDTQMMELLQSSLEEAFVIPNQQVALGHIGKRGSTVGV 180
           VVFRARGFVPDKDLLEHVCYEFFDTQMMELLQSSLEEAFVIPNQQVALGHIGKRGSTVGV
Sbjct: 121 VVFRARGFVPDKDLLEHVCYEFFDTQMMELLQSSLEEAFVIPNQQVALGHIGKRGSTVGV 180

Query: 181 TKEKRIKYALSQ 192
           TKEKRIKYALSQ
Sbjct: 181 TKEKRIKYALSQ 192

[Close]

BLAST of Csor.00g114780 vs. NCBI nr
Match: KAG7026573.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 335 bits (858), Expect = 4.39e-107
Identity = 163/167 (97.60%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 22  KDLAELRECPYDQGGYFIINESEKVLIAQEKMCIKYVSKKGQPNKYAFVEDVWSMAESQN 81
           +DLAELRECPYDQGGYFIINESEKVLIAQEKMCIKYVSKKGQPNKY FVEDVWSMAESQN
Sbjct: 607 QDLAELRECPYDQGGYFIINESEKVLIAQEKMCIKYVSKKGQPNKYGFVEDVWSMAESQN 666

Query: 82  RPPNTMFAHKCFLELVPRGSSGQYIHATLPETRTEIMIIVVFRARGFVPDKDLLEHVCYE 141
           RPPNTMFAHKCFLELVPRGSSGQYIHATLPETRTEIMIIVVFRAR FVPDKDLLEHVCYE
Sbjct: 667 RPPNTMFAHKCFLELVPRGSSGQYIHATLPETRTEIMIIVVFRAREFVPDKDLLEHVCYE 726

Query: 142 FFDTQMMELLQSSLEEAFVIPNQQVALGHIGKRGSTVGVTKEKRIKY 188
           FFDTQMMELLQSSLEEAFVIPNQQVALGHIGKRGSTVGVTKEKRIK+
Sbjct: 727 FFDTQMMELLQSSLEEAFVIPNQQVALGHIGKRGSTVGVTKEKRIKF 773

[Close]

BLAST of Csor.00g114780 vs. NCBI nr
Match: ADV72346.1 (RNA polymerase II second largest subunit, partial [Rhododendron asperulum])

HSP 1 Score: 248 bits (633), Expect = 8.20e-81
Identity = 130/173 (75.14%), Postives = 139/173 (80.35%), Query Frame = 0


Query: 16  LYHNSEKDLAELRECPYDQGGYFIINESEKVLIAQEKMCIK--YVSKKGQPNKYAFVEDV 75
           LY NSEKDL EL ECPYDQGGYFIIN SEKVLIAQEKM     YV KK QPNKYA+V +V
Sbjct: 12  LYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEV 71

Query: 76  WSMAESQNRPPNTMFAHKCFLELVPRGSSGQYIHATLPETRTEIMIIVVFRARGFVPDKD 135
            SMAESQNRPP+TMF           GSSGQYI ATLP  RTEI IIVVFRA GFV DKD
Sbjct: 72  RSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIVVFRALGFVADKD 131

Query: 136 LLEHVCYEFFDTQMMELLQSSLEEAFVIPNQQVALGHIGKRGSTVGVTKEKRI 186
           +LEH+CY+F DTQMMELL+ SLEEAFVI NQQVAL +IGKRG+TVGVTKEKRI
Sbjct: 132 ILEHICYDFADTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRI 184

[Close]

BLAST of Csor.00g114780 vs. NCBI nr
Match: ADV72310.1 (RNA polymerase II second largest subunit, partial [Rhododendron superbum])

HSP 1 Score: 248 bits (632), Expect = 1.16e-80
Identity = 129/173 (74.57%), Postives = 139/173 (80.35%), Query Frame = 0


Query: 16  LYHNSEKDLAELRECPYDQGGYFIINESEKVLIAQEKMCIK--YVSKKGQPNKYAFVEDV 75
           LY NSEKDL EL ECPYDQGGYFIIN SEKVLIAQEKM     YV KK QPNKYA+V +V
Sbjct: 12  LYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEV 71

Query: 76  WSMAESQNRPPNTMFAHKCFLELVPRGSSGQYIHATLPETRTEIMIIVVFRARGFVPDKD 135
            SMAESQNRPP+TMF           GSSGQYI ATLP  RTEI II+VFRA GFV DKD
Sbjct: 72  RSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKD 131

Query: 136 LLEHVCYEFFDTQMMELLQSSLEEAFVIPNQQVALGHIGKRGSTVGVTKEKRI 186
           +LEH+CY+F DTQMMELL+ SLEEAFVI NQQVAL +IGKRG+TVGVTKEKRI
Sbjct: 132 ILEHICYDFADTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRI 184

[Close]

BLAST of Csor.00g114780 vs. NCBI nr
Match: ADV72299.1 (RNA polymerase II second largest subunit, partial [Rhododendron rarum] >ADV72300.1 RNA polymerase II second largest subunit, partial [Rhododendron zoelleri] >ADV72301.1 RNA polymerase II second largest subunit, partial [Rhododendron inundatum] >ADV72302.1 RNA polymerase II second largest subunit, partial [Rhododendron solitarium] >ADV72303.1 RNA polymerase II second largest subunit, partial [Rhododendron gracilentum] >ADV72304.1 RNA polymerase II second largest subunit, partial [Rhododendron dielsianum] >ADV72305.1 RNA polymerase II second largest subunit, partial [Rhododendron herzogii] >ADV72306.1 RNA polymerase II second largest subunit, partial [Rhododendron luraluense] >ADV72307.1 RNA polymerase II second largest subunit, partial [Rhododendron inconspicuum] >ADV72308.1 RNA polymerase II second largest subunit, partial [Rhododendron yelliottii] >ADV72309.1 RNA polymerase II second largest subunit, partial [Rhododendron konori] >ADV72311.1 RNA polymerase II second largest subunit, partial [Rhododendron carringtoniae] >ADV72312.1 RNA polymerase II second largest subunit, partial [Rhododendron lochiae] >ADV72313.1 RNA polymerase II second largest subunit, partial [Rhododendron leucogigas] >ADV72314.1 RNA polymerase II second largest subunit, partial [Rhododendron buxifolium] >ADV72315.1 RNA polymerase II second largest subunit, partial [Rhododendron pauciflorum] >ADV72316.1 RNA polymerase II second largest subunit, partial [Rhododendron sumatranum] >ADV72317.1 RNA polymerase II second largest subunit, partial [Rhododendron album] >ADV72318.1 RNA polymerase II second largest subunit, partial [Rhododendron citrinum] >ADV72319.1 RNA polymerase II second largest subunit, partial [Rhododendron aequabile] >ADV72320.1 RNA polymerase II second largest subunit, partial [Rhododendron edanoi] >ADV72321.1 RNA polymerase II second largest subunit, partial [Rhododendron maxwellii] >ADV72322.1 RNA polymerase II second largest subunit, partial [Rhododendron rugosum] >ADV72323.1 RNA polymerase II second largest subunit, partial [Rhododendron alborugosum] >ADV72324.1 RNA polymerase II second largest subunit, partial [Rhododendron praetervisum] >ADV72325.1 RNA polymerase II second largest subunit, partial [Rhododendron ruttenii] >ADV72326.1 RNA polymerase II second largest subunit, partial [Rhododendron radians] >ADV72327.1 RNA polymerase II second largest subunit, partial [Rhododendron jasminiflorum] >ADV72328.1 RNA polymerase II second largest subunit, partial [Rhododendron suaveolens] >ADV72329.1 RNA polymerase II second largest subunit, partial [Rhododendron arenicola] >ADV72330.1 RNA polymerase II second largest subunit, partial [Rhododendron zollingeri] >ADV72331.1 RNA polymerase II second largest subunit, partial [Rhododendron pudorinum] >ADV72332.1 RNA polymerase II second largest subunit, partial [Rhododendron alternans] >ADV72333.1 RNA polymerase II second largest subunit, partial [Rhododendron renschianum] >ADV72334.1 RNA polymerase II second largest subunit, partial [Rhododendron rhodopus] >ADV72335.1 RNA polymerase II second largest subunit, partial [Rhododendron javanicum] >ADV72336.1 RNA polymerase II second largest subunit, partial [Rhododendron rarilepidotum] >ADV72337.1 RNA polymerase II second largest subunit, partial [Rhododendron brookeanum] >ADV72338.1 RNA polymerase II second largest subunit, partial [Rhododendron crassifolium] >ADV72339.1 RNA polymerase II second largest subunit, partial [Rhododendron apoanum] >ADV72340.1 RNA polymerase II second largest subunit, partial [Rhododendron fallacinum] >ADV72341.1 RNA polymerase II second largest subunit, partial [Rhododendron malayanum] >ADV72342.1 RNA polymerase II second largest subunit, partial [Rhododendron himantodes] >ADV72343.1 RNA polymerase II second largest subunit, partial [Rhododendron robinsonii] >ADV72344.1 RNA polymerase II second largest subunit, partial [Rhododendron kawakamii] >ADV72345.1 RNA polymerase II second largest subunit, partial [Rhododendron rushforthii] >ADV72347.1 RNA polymerase II second largest subunit, partial [Rhododendron emarginatum] >ADV72348.1 RNA polymerase II second largest subunit, partial [Rhododendron perakense] >ADV72349.1 RNA polymerase II second largest subunit, partial [Rhododendron meliphagidum] >ADV72350.1 RNA polymerase II second largest subunit, partial [Rhododendron quadrasianum] >ADV72351.1 RNA polymerase II second largest subunit, partial [Rhododendron gaultheriifolium] >ADV72352.1 RNA polymerase II second largest subunit, partial [Rhododendron ericoides] >ADV72353.1 RNA polymerase II second largest subunit, partial [Rhododendron retusum] >ADV72354.1 RNA polymerase II second largest subunit, partial [Rhododendron adinophyllum] >ADV72355.1 RNA polymerase II second largest subunit, partial [Rhododendron vaccinioides] >ADV72356.1 RNA polymerase II second largest subunit, partial [Rhododendron vanderbiltianum] >ADV72357.1 RNA polymerase II second largest subunit, partial [Rhododendron sulfureum] >ADV72358.1 RNA polymerase II second largest subunit, partial [Rhododendron excellens] >ADV72359.1 RNA polymerase II second largest subunit, partial [Rhododendron pendulum] >ADV72360.1 RNA polymerase II second largest subunit, partial [Rhododendron mucronulatum] >ADV72362.1 RNA polymerase II second largest subunit, partial [Rhododendron edgeworthii] >ADV72363.1 RNA polymerase II second largest subunit, partial [Rhododendron xanthostephanum] >ADV72364.1 RNA polymerase II second largest subunit, partial [Rhododendron hypoleucum] >ADV72365.1 RNA polymerase II second largest subunit, partial [Rhododendron tomentosum] >ADV72366.1 RNA polymerase II second largest subunit, partial [Rhododendron minus] >ADV72367.1 RNA polymerase II second largest subunit, partial [Rhododendron macabeanum] >ADV72369.1 RNA polymerase II second largest subunit, partial [Rhododendron triflorum] >ADV72370.1 RNA polymerase II second largest subunit, partial [Rhododendron afghanicum] >ADV72371.1 RNA polymerase II second largest subunit, partial [Rhododendron spinuliferum] >ADV72372.1 RNA polymerase II second largest subunit, partial [Rhododendron virgatum] >ADV72373.1 RNA polymerase II second largest subunit, partial [Rhododendron santapaui] >ADV72374.1 RNA polymerase II second largest subunit, partial [Rhododendron ferrugineum] >ADV72375.1 RNA polymerase II second largest subunit, partial [Rhododendron micranthum] >ADV72376.1 RNA polymerase II second largest subunit, partial [Rhododendron dauricum] >ADV72378.1 RNA polymerase II second largest subunit, partial [Rhododendron moulmainense] >ADV72379.1 RNA polymerase II second largest subunit, partial [Rhododendron camtschaticum])

HSP 1 Score: 248 bits (632), Expect = 1.16e-80
Identity = 129/173 (74.57%), Postives = 139/173 (80.35%), Query Frame = 0


Query: 16  LYHNSEKDLAELRECPYDQGGYFIINESEKVLIAQEKMCIK--YVSKKGQPNKYAFVEDV 75
           LY NSEKDL EL ECPYDQGGYFIIN SEKVLIAQEKM     YV KK QPNKYA+V +V
Sbjct: 12  LYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEV 71

Query: 76  WSMAESQNRPPNTMFAHKCFLELVPRGSSGQYIHATLPETRTEIMIIVVFRARGFVPDKD 135
            SMAESQNRPP+TMF           GSSGQYI ATLP  RTEI II+VFRA GFV DKD
Sbjct: 72  RSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKD 131

Query: 136 LLEHVCYEFFDTQMMELLQSSLEEAFVIPNQQVALGHIGKRGSTVGVTKEKRI 186
           +LEH+CY+F DTQMMELL+ SLEEAFVI NQQVAL +IGKRG+TVGVTKEKRI
Sbjct: 132 ILEHICYDFADTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRI 184

[Close]

BLAST of Csor.00g114780 vs. ExPASy TrEMBL
Match: G0T9Z1 (DNA-directed RNA polymerase (Fragment) OS=Rhododendron asperulum OX=313318 GN=RPB2D PE=3 SV=1)

HSP 1 Score: 248 bits (633), Expect = 3.97e-81
Identity = 130/173 (75.14%), Postives = 139/173 (80.35%), Query Frame = 0


Query: 16  LYHNSEKDLAELRECPYDQGGYFIINESEKVLIAQEKMCIK--YVSKKGQPNKYAFVEDV 75
           LY NSEKDL EL ECPYDQGGYFIIN SEKVLIAQEKM     YV KK QPNKYA+V +V
Sbjct: 12  LYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEV 71

Query: 76  WSMAESQNRPPNTMFAHKCFLELVPRGSSGQYIHATLPETRTEIMIIVVFRARGFVPDKD 135
            SMAESQNRPP+TMF           GSSGQYI ATLP  RTEI IIVVFRA GFV DKD
Sbjct: 72  RSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIVVFRALGFVADKD 131

Query: 136 LLEHVCYEFFDTQMMELLQSSLEEAFVIPNQQVALGHIGKRGSTVGVTKEKRI 186
           +LEH+CY+F DTQMMELL+ SLEEAFVI NQQVAL +IGKRG+TVGVTKEKRI
Sbjct: 132 ILEHICYDFADTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRI 184

[Close]

BLAST of Csor.00g114780 vs. ExPASy TrEMBL
Match: G0TA01 (DNA-directed RNA polymerase (Fragment) OS=Rhododendron vanderbiltianum OX=940889 GN=RPB2D PE=3 SV=1)

HSP 1 Score: 248 bits (632), Expect = 5.63e-81
Identity = 129/173 (74.57%), Postives = 139/173 (80.35%), Query Frame = 0


Query: 16  LYHNSEKDLAELRECPYDQGGYFIINESEKVLIAQEKMCIK--YVSKKGQPNKYAFVEDV 75
           LY NSEKDL EL ECPYDQGGYFIIN SEKVLIAQEKM     YV KK QPNKYA+V +V
Sbjct: 12  LYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEV 71

Query: 76  WSMAESQNRPPNTMFAHKCFLELVPRGSSGQYIHATLPETRTEIMIIVVFRARGFVPDKD 135
            SMAESQNRPP+TMF           GSSGQYI ATLP  RTEI II+VFRA GFV DKD
Sbjct: 72  RSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKD 131

Query: 136 LLEHVCYEFFDTQMMELLQSSLEEAFVIPNQQVALGHIGKRGSTVGVTKEKRI 186
           +LEH+CY+F DTQMMELL+ SLEEAFVI NQQVAL +IGKRG+TVGVTKEKRI
Sbjct: 132 ILEHICYDFADTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRI 184

[Close]

BLAST of Csor.00g114780 vs. ExPASy TrEMBL
Match: G0T9Y0 (DNA-directed RNA polymerase (Fragment) OS=Rhododendron javanicum OX=49624 GN=RPB2D PE=3 SV=1)

HSP 1 Score: 248 bits (632), Expect = 5.63e-81
Identity = 129/173 (74.57%), Postives = 139/173 (80.35%), Query Frame = 0


Query: 16  LYHNSEKDLAELRECPYDQGGYFIINESEKVLIAQEKMCIK--YVSKKGQPNKYAFVEDV 75
           LY NSEKDL EL ECPYDQGGYFIIN SEKVLIAQEKM     YV KK QPNKYA+V +V
Sbjct: 12  LYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEV 71

Query: 76  WSMAESQNRPPNTMFAHKCFLELVPRGSSGQYIHATLPETRTEIMIIVVFRARGFVPDKD 135
            SMAESQNRPP+TMF           GSSGQYI ATLP  RTEI II+VFRA GFV DKD
Sbjct: 72  RSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKD 131

Query: 136 LLEHVCYEFFDTQMMELLQSSLEEAFVIPNQQVALGHIGKRGSTVGVTKEKRI 186
           +LEH+CY+F DTQMMELL+ SLEEAFVI NQQVAL +IGKRG+TVGVTKEKRI
Sbjct: 132 ILEHICYDFADTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRI 184

[Close]

BLAST of Csor.00g114780 vs. ExPASy TrEMBL
Match: G0TA24 (DNA-directed RNA polymerase (Fragment) OS=Therorhodion camtschaticum OX=49174 GN=RPB2D PE=3 SV=1)

HSP 1 Score: 248 bits (632), Expect = 5.63e-81
Identity = 129/173 (74.57%), Postives = 139/173 (80.35%), Query Frame = 0


Query: 16  LYHNSEKDLAELRECPYDQGGYFIINESEKVLIAQEKMCIK--YVSKKGQPNKYAFVEDV 75
           LY NSEKDL EL ECPYDQGGYFIIN SEKVLIAQEKM     YV KK QPNKYA+V +V
Sbjct: 12  LYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEV 71

Query: 76  WSMAESQNRPPNTMFAHKCFLELVPRGSSGQYIHATLPETRTEIMIIVVFRARGFVPDKD 135
            SMAESQNRPP+TMF           GSSGQYI ATLP  RTEI II+VFRA GFV DKD
Sbjct: 72  RSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKD 131

Query: 136 LLEHVCYEFFDTQMMELLQSSLEEAFVIPNQQVALGHIGKRGSTVGVTKEKRI 186
           +LEH+CY+F DTQMMELL+ SLEEAFVI NQQVAL +IGKRG+TVGVTKEKRI
Sbjct: 132 ILEHICYDFADTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRI 184

[Close]

BLAST of Csor.00g114780 vs. ExPASy TrEMBL
Match: G0T9Z3 (DNA-directed RNA polymerase (Fragment) OS=Rhododendron perakense OX=940878 GN=RPB2D PE=3 SV=1)

HSP 1 Score: 248 bits (632), Expect = 5.63e-81
Identity = 129/173 (74.57%), Postives = 139/173 (80.35%), Query Frame = 0


Query: 16  LYHNSEKDLAELRECPYDQGGYFIINESEKVLIAQEKMCIK--YVSKKGQPNKYAFVEDV 75
           LY NSEKDL EL ECPYDQGGYFIIN SEKVLIAQEKM     YV KK QPNKYA+V +V
Sbjct: 12  LYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEV 71

Query: 76  WSMAESQNRPPNTMFAHKCFLELVPRGSSGQYIHATLPETRTEIMIIVVFRARGFVPDKD 135
            SMAESQNRPP+TMF           GSSGQYI ATLP  RTEI II+VFRA GFV DKD
Sbjct: 72  RSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKD 131

Query: 136 LLEHVCYEFFDTQMMELLQSSLEEAFVIPNQQVALGHIGKRGSTVGVTKEKRI 186
           +LEH+CY+F DTQMMELL+ SLEEAFVI NQQVAL +IGKRG+TVGVTKEKRI
Sbjct: 132 ILEHICYDFADTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRI 184

[Close]

BLAST of Csor.00g114780 vs. TAIR 10
Match: AT4G21710.1 (DNA-directed RNA polymerase family protein )

HSP 1 Score: 248.8 bits (634), Expect = 3.5e-66
Identity = 128/176 (72.73%), Postives = 140/176 (79.55%), Query Frame = 0


Query: 16  LYHNSEKDLAELRECPYDQGGYFIINESEKVLIAQEKMCIK--YVSKKGQPNKYAFVEDV 75
           L+ NSEKDL EL ECPYDQGGYFIIN SEKVLIAQEKM     YV KK QPNKYA+V +V
Sbjct: 169 LFQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEV 228

Query: 76  WSMAESQNRPPNTMFAHKCFLELVPRGSSGQYIHATLPETRTEIMIIVVFRARGFVPDKD 135
            SMAE+QNRPP+TMF           GSSGQYI  TLP  RTEI II+VFRA GFV DKD
Sbjct: 229 RSMAENQNRPPSTMFVRMLARASAKGGSSGQYIRCTLPYIRTEIPIIIVFRALGFVADKD 288

Query: 136 LLEHVCYEFFDTQMMELLQSSLEEAFVIPNQQVALGHIGKRGSTVGVTKEKRIKYA 190
           +LEH+CY+F DTQMMELL+ SLEEAFVI NQ VAL +IGKRG+TVGVTKEKRIKYA
Sbjct: 289 ILEHICYDFADTQMMELLRPSLEEAFVIQNQLVALDYIGKRGATVGVTKEKRIKYA 344

[Close]

BLAST of Csor.00g114780 vs. TAIR 10
Match: AT5G45140.1 (nuclear RNA polymerase C2 )

HSP 1 Score: 57.4 bits (137), Expect = 1.5e-08
Identity = 47/168 (27.98%), Postives = 80/168 (47.62%), Query Frame = 0


Query: 9   LDCCLFILYHNSEKDLAELRECPYDQGGYFIINESEKVLIAQEKMCIKYV----SKKGQP 68
           L  C  +L+   E++LA L ECP D GGYFII  +EKVL+ QE++    +     KKG  
Sbjct: 149 LRSCRCVLHGKDEEELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKNRIIIDSDKKGNI 208

Query: 69  NKYAFVEDVWSMAESQNRPPNTMFAHKCFLELVPRGSSGQYIHATLPETRTEIMIIVVFR 128
           N  A V     M +S           K  +++       + I+  L     +I II+V +
Sbjct: 209 N--ASVTSSTEMTKS-----------KTVIQM-----EKEKIYLFLHRFVKKIPIIIVLK 268

Query: 129 ARGFVPDKDLLEHVCYE-FFDTQMMELLQSSLEEAFVIPNQQVALGHI 172
           A G   D+++++ V  +  F   ++  ++  + E   +  Q+ AL ++
Sbjct: 269 AMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEG--VNTQKQALDYL 296

[Close]

BLAST of Csor.00g114780 vs. TAIR 10
Match: AT3G18090.1 (nuclear RNA polymerase D2B )

HSP 1 Score: 56.2 bits (134), Expect = 3.3e-08
Identity = 40/146 (27.40%), Postives = 66/146 (45.21%), Query Frame = 0


Query: 15  ILYHNSEKDLAELRE--CPYDQGGYFIINESEKVLIAQEKMCIKYVSKKGQPNKYAFVED 74
           +L   SEK     ++  C +DQGGYF+I  +EKV IAQE+MC K +     P        
Sbjct: 65  VLCKTSEKGKENCKKGNCAFDQGGYFVIKGAEKVFIAQEQMCTKRLWISNSP-------- 124

Query: 75  VWSMAESQNRPPNTMFAHKCFLELVPRGSSGQYIHATLPETRTEIMIIVVFRARGFVPDK 134
            W+++       N         E        + +  T+    TEI + ++F A G   DK
Sbjct: 125 -WTVSFRSETKRNRFIVRLSENEKAEDYKIMEKV-LTVYFLSTEIPVWLLFFALGVSSDK 184

Query: 135 DLLEHVCYEFFDTQMMELLQSSLEEA 159
           + ++ + ++  D  +   L +S+ EA
Sbjct: 185 EAMDLIAFDGDDASITNSLIASIHEA 200

[Close]

BLAST of Csor.00g114780 vs. TAIR 10
Match: AT3G23780.1 (nuclear RNA polymerase D2A )

HSP 1 Score: 55.5 bits (132), Expect = 5.6e-08
Identity = 40/146 (27.40%), Postives = 65/146 (44.52%), Query Frame = 0


Query: 15  ILYHNSEKDLAELR--ECPYDQGGYFIINESEKVLIAQEKMCIKYVSKKGQPNKYAFVED 74
           IL   SEK     +  +C +DQGGYF+I  +EKV IAQE+MC K +     P        
Sbjct: 183 ILCKTSEKGKENCKKGDCAFDQGGYFVIKGAEKVFIAQEQMCTKRLWISNSP-------- 242

Query: 75  VWSMAESQNRPPNTMFAHKCFLELVPRGSSGQYIHATLPETRTEIMIIVVFRARGFVPDK 134
            W+++       N         E        + +  T+    TEI + ++F A G   DK
Sbjct: 243 -WTVSFRSENKRNRFIVRLSENEKAEDYKRREKV-LTVYFLSTEIPVWLLFFALGVSSDK 302

Query: 135 DLLEHVCYEFFDTQMMELLQSSLEEA 159
           + ++ + ++  D  +   L +S+  A
Sbjct: 303 EAMDLIAFDGDDASITNSLIASIHVA 318

[Close]

BLAST of Csor.00g114780 vs. TAIR 10
Match: AT3G23780.2 (nuclear RNA polymerase D2A )

HSP 1 Score: 55.5 bits (132), Expect = 5.6e-08
Identity = 40/146 (27.40%), Postives = 65/146 (44.52%), Query Frame = 0


Query: 15  ILYHNSEKDLAELR--ECPYDQGGYFIINESEKVLIAQEKMCIKYVSKKGQPNKYAFVED 74
           IL   SEK     +  +C +DQGGYF+I  +EKV IAQE+MC K +     P        
Sbjct: 183 ILCKTSEKGKENCKKGDCAFDQGGYFVIKGAEKVFIAQEQMCTKRLWISNSP-------- 242

Query: 75  VWSMAESQNRPPNTMFAHKCFLELVPRGSSGQYIHATLPETRTEIMIIVVFRARGFVPDK 134
            W+++       N         E        + +  T+    TEI + ++F A G   DK
Sbjct: 243 -WTVSFRSENKRNRFIVRLSENEKAEDYKRREKV-LTVYFLSTEIPVWLLFFALGVSSDK 302

Query: 135 DLLEHVCYEFFDTQMMELLQSSLEEA 159
           + ++ + ++  D  +   L +S+  A
Sbjct: 303 EAMDLIAFDGDDASITNSLIASIHVA 318

The following BLAST results are available for this feature:

BLAST of Csor.00g114780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q42877	1.7e-65	73.30	DNA-directed RNA polymerase II subunit RPB2 OS=Solanum lycopersicum OX=4081 GN=R...	[more]
P38420	4.9e-65	72.73	DNA-directed RNA polymerase II subunit 2 OS=Arabidopsis thaliana OX=3702 GN=NRPB...	[more]
Q54J75	4.0e-43	51.98	DNA-directed RNA polymerase II subunit rpb2 OS=Dictyostelium discoideum OX=44689...	[more]
Q02061	1.3e-41	50.84	DNA-directed RNA polymerase II subunit RPB2 OS=Schizosaccharomyces pombe (strain...	[more]
P30876	8.4e-41	51.96	DNA-directed RNA polymerase II subunit RPB2 OS=Homo sapiens OX=9606 GN=POLR2B PE...	[more]

BLAST of Csor.00g114780 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6594604.1	1.36e-138	100.00	DNA-directed RNA polymerase II subunit RPB2, partial [Cucurbita argyrosperma sub...	[more]
KAG7026573.1	4.39e-107	97.60	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
ADV72346.1	8.20e-81	75.14	RNA polymerase II second largest subunit, partial [Rhododendron asperulum]	[more]
ADV72310.1	1.16e-80	74.57	RNA polymerase II second largest subunit, partial [Rhododendron superbum]	[more]
ADV72299.1	1.16e-80	74.57	RNA polymerase II second largest subunit, partial [Rhododendron rarum] >ADV72300...	[more]

BLAST of Csor.00g114780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
G0T9Z1	3.97e-81	75.14	DNA-directed RNA polymerase (Fragment) OS=Rhododendron asperulum OX=313318 GN=RP...	[more]
G0TA01	5.63e-81	74.57	DNA-directed RNA polymerase (Fragment) OS=Rhododendron vanderbiltianum OX=940889...	[more]
G0T9Y0	5.63e-81	74.57	DNA-directed RNA polymerase (Fragment) OS=Rhododendron javanicum OX=49624 GN=RPB...	[more]
G0TA24	5.63e-81	74.57	DNA-directed RNA polymerase (Fragment) OS=Therorhodion camtschaticum OX=49174 GN...	[more]
G0T9Z3	5.63e-81	74.57	DNA-directed RNA polymerase (Fragment) OS=Rhododendron perakense OX=940878 GN=RP...	[more]

BLAST of Csor.00g114780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21710.1	3.5e-66	72.73	DNA-directed RNA polymerase family protein	[more]
AT5G45140.1	1.5e-08	27.98	nuclear RNA polymerase C2	[more]
AT3G18090.1	3.3e-08	27.40	nuclear RNA polymerase D2B	[more]
AT3G23780.1	5.6e-08	27.40	nuclear RNA polymerase D2A	[more]
AT3G23780.2	5.6e-08	27.40	nuclear RNA polymerase D2A	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007642	RNA polymerase Rpb2, domain 2	PFAM	PF04561	RNA_pol_Rpb2_2	coord: 101..189 e-value: 3.2E-18 score: 66.0
IPR007644	RNA polymerase, beta subunit, protrusion	PFAM	PF04563	RNA_pol_Rpb2_1	coord: 15..100 e-value: 4.2E-13 score: 49.5
IPR037034	RNA polymerase Rpb2, domain 2 superfamily	GENE3D	3.90.1110.10	RNA polymerase Rpb2, domain 2	coord: 55..192 e-value: 1.7E-30 score: 108.0
None	No IPR available	PANTHER	PTHR20856:SF23	DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA	coord: 14..189
None	No IPR available	SUPERFAMILY	64484	beta and beta-prime subunits of DNA dependent RNA-polymerase	coord: 14..189
IPR015712	DNA-directed RNA polymerase, subunit 2	PANTHER	PTHR20856	DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2	coord: 14..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g114780.m01	Csor.00g114780.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006351	transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0032549	ribonucleoside binding