Csor.00g108490 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g108490
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	serine/arginine-rich splicing factor RS31-like
Location	Csor_Chr06: 7726763 .. 7733920 (-)
RNA-Seq Expression	Csor.00g108490
Synteny	Csor.00g108490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATACTCTAACAAGCTCTGTTTCAACTCTCAGAGTTCCATCCACTTTAGCTTCATCTCGCGACCTTCTTCACCTCAAGAATTACTCTGCTCATCTTCCTCATCGCTCTCCTTCTCGCAGATCCAACTCAATCTCCAAACCCCCTAATTTTCTCTCTACTCACAAAACCCTAAATCCGCTTCCGTTTTCTTCTTCCTTCTCCTCTTCCTCCCCACGCCGCTCCTCTTCGCCGTTACTTCACCGTCGGCCTGCTGCTGGATACGCCGCGGCACTCGTCGATGCATCGCAAACTACCGGATCGATTCACTCGGTGGCGAAGGACGTTGGGAGATTCTCGAAGGTGTTGAGAACGAAGCGAATCGGGGGGTTTTTGAACGATCCGTTTGTAGTGGAGGAGGAGAAAGGGCGATTGGTGAGGGAAATTGCGGCGAAGGGAGGGTTTGAGAAACAGGTGGTGAAGTTGACGAAGATGTTGATTGAGAAAAAGAGATTGGGGATTCTGAATGAGGTGTTGAGCGAATTCGAGAGGATTTATGATGAGCTTTGTGGAACTGAAGTGGTTTTGGTTTCTTCCAACAGGAAGATGCAGGAACAGGAGCTGTTTGGGATTGCGAAGAATGTGCAAAGACTTAGTGGGGCTATGAAAGTGAAGGTTAGAAGCTTCATCAATGGCGGATTAATGGTGTAGAAGAACTTAATCTGTCTACAGAAGCTTTGAGTATGTGTTCAATTAACTTATCATTTTGATTACATTTCTTCTTCTTCAAGCTTCTACACTCAGCCCATTTTCTTCTCTTCTTCTTCTTCTCTTTTCATCGCATTCTTCAGCCACCCAATGTTTGCCTTCTCCTAAACAAAAATGGTGGGAAGCAATTTAATGGGTTTGTTTTTAATTTGCAGAAATCCGTGCTGGAACTGGAAATTGTCGTGGTTTTCGAATTTTAGGTAATCTCGACCCCCACCCCAACCCCCACCAAAAGGGCCTTCCAAGCGAGATTTCCCTACCTCATAAATGAATATTAGAACAGTTCCCTCCTCTTTCAACCAACATTATTGTAGCCCTTTTCCTCTGTAACTTCACATATGATACGAGAAGTAGATCCAGAAAAATTAGTTTTGGTGGAACACATTATGTAAATATATGTTCAACTGGCACTCTGTGTTTGTTTTGAATCTCTGGAACTTTCTTTTGCAATCATTAATGTAGCGTTGTATGTGGAAATTTATGGTGCATTACGATGATAGCTAATGAGCGTGGAATGAATTATTGTTGCGTAAAATCATTCAACTTACTATTGTAAGTTTATGGGTGAAGTTTTAATATGGTGCCATCGTAAGAATGTTATTGTCCACGAGAATAAAGTTCTAGATCATTGCTATAAATACACCCGCTTAATTTTATAGAGAGGCAACATAAAATAAATGAGAGAATAATTGGGAGAGAGGCATGAGTTCCACCTATTAAATAAATAACTAAGATTGAAATGTAAATAATCCATAAATCAAAGACAAAAGTAAAAAAATAGGCTGTCACGAGAAAGATTGAATATCGAGATCATGAACGCGCCAGGTAGGGGTCGAACCTACGACTTTCTGCTTAGGAAACAGACGCTCTATCCACTGAGCTACAAGCGCTAGATGAAAAATCTATTATTGGAAGAGAAAACTAAATAAAATAGACTGTCCCGAGAAAGATTGAATATTCAAATCACAAACGCGCCAGGTAGGGGTCGAACCTACGACTTTCTGCTTAGGAAACAGACGCTCTATCCACTGAACTACAAGCGCCAGATGCAAAATCAATAGATGATAAACAAGTGTAAATAAAATAGGCTGTCACGAGAAAGACTGAGGTAATAAACGCGCCAGATAGGGGTCGAACCTACGACTTTCTGCTTAGGAAACAGACGCTCTATCCACTGAGCTACAAGCGCCAGATGCAAAATCAATAGATGATAAACAAGTGTAAATAAAATAGGCTGTCACGAGAAAGACTGAGGTAATAAACGCGCCAGATAGGGGTCGAACCTACGACTTTCTGCTTAGGAAACAGACGCTCTATCCACTGAGCTACAAGCGCCAGATGCAAAATCTGTAGATGAAAGAAAAAGCTAAATAAAATACACGGTTACGACAAAGATTGAATATTGAAATCACAAACGCGCCAGGTAGGGGTCGAACCTACGACTTTCTGCTTAGGAAACAGACGCTCTATCCACTGAGCTACAGGCGCGTTCTGATCTTTTACGACTACCACAACTAAAGTTAATTATTGAATTGGTAACTCAAATTTATTAGATTAGATCAACTGACATTAATTATTCAAAAAAGAAGAAAATAGTGATAAGCTTAGCCATTTAAATACTTATTTATTTAAATTAATAACTTAATATCAATTTGGTGTTATGAAAATTTTGATAAAAATTTATAAATTATTTTGATATTCAATAACAAATCATTTAATTTCTGCAAATAGTTGGGATATAGAAAAATGTTTTTAAAAAACACAAATAAGTAAATGAAATACGAAAACACGAACTTACAAATTTTAATATTAGTAATTAAACATATAATTAAGCATTTAAGATTTACTGAAAATTTAATAGTATAAAAACAAAAAAAAAAAGGATGTTTTAAGCCATATTTTATGAAATTCAATTAACACAACTTTCTATACGATATTGTCGGAACATAAACTCTCATGTCTTTCTTTTGAGCTTTCCAAAACGCGTAATTGAAGAAAGTATTCTTTAATTATAAACTCACAATCATTTTCTCGTTTCACCAGCATAATTGCTTGATTCCTATTTCTGTAAGTCGGGATTGGCCTCTGATGTATTTGCTCTGGCGGTGTTGTTTGACATGTGTGCGAAATTGGGAATGTTGAGGTCTGCACGCCACCTGTTTGATGAAATGCCGCTTCCAGATATACCCACTTGGAATTCGATGATTGCTGGTATTGCAAGGTCCGGCGACATGGGGGGCTGCATTAGAATTGTTTGACAGAATGCCTATGACATGGGTGGTTTCGTGGACTGCAATTGGTATAATGGGTCTGCTTAGATGGTATGTGCCTTAGTAAGTTCAGATGTGCTCACATTGATAATTTTGATACCATGTTAAACTGCTCCATATTCTAATTGTTGAACCTAATATGTCGTATGTATAATCTTTTATGCATATTCTTAATAACTACTTGTATTATCGAATCGGTCTCGTACCAGGTACGAAGCATGAGATTTGATGATGTGAGATTCGTGGGGCTTCTCTTGGGCTGCAGTTATGGGAGCATGGTTGCAAAAGGTCGACAACTCTTTGAACCAATGGAGAGTAAGTTTCCAATTACTTCCAATAACTACTTGTTTGATTGATCTATTAAATTATTGTCGGTCAGAACATGCTTATAATTTTGATCAAACAAGAACACTTGATTGAGATTCAAATCACTTAACAAGTTAGGTCGACCATTGTCAAACTTAAATGATTTTAACTATGCAATCTAAGCTAAATAAAATTGCAAAAAAATTTAGCCAATGGCTAAAAGAATGTACAAATGCTCGTTTTATTACATTTTTCAAGTCTATTTTACAAAGATAACAGTCATGACTTTATATATTATTAAAATGAAGACCCTTCACCTTCCATCGATGAAGCATTTTAAGAATTCTAACTTTTATACTTTATGACCATAATAAGTCACGGTGCATACCGTATGACATAATTAGCTACTACGTAAAATAAGCCTTAAAATTTTAATAGACGTTGTTTTTTTTAATATTTTTAATAAAAAAATTTAAACTAATAATAGAAACCAAATGGGGTGTGATTCAATGCATAGAGGGTAAAATAGTATATTTACACACGGCTTCACTGAATGAACTCATAATTGGTCCTTCTTCCGCTTGAGGCTGAATCGATTTTATCACTCTCAAAATTTTAAATCCCCAAAAGACCCTTTTGGACAGTCTAACGGTTCAATCTCCGTTGATGAAAGTCTTGAATAAAAAGCCGGATAATCGGACGGTCTGAAATTATCTACAGTGAAAATACTAGGGCTTTCTTCTGGTATTTAAAATGAGCTAAAAATTGGATCACATAGGGCTCTTCAAAAAGATACAGGCTTTCTCTTCCTCTTCCTCTCTCCTAGGGTTTTTCTTGTGTTCGAGTCCAAGAATCTGCAAGGTTTGTTTGTAATCATTTGATCCATGCTATTCTAAGCATTTTTCATTCGCTACTTGATCGATTTACTTCTTGTTTCTGGTCAAACTCTGAAAGTGAGTTCTTCGTTAACGCATTCCTTTATCCTCTCTTATACCATTGATCTCTTATAGTTTAACTGGAAAAAGAATAGATATCACTATGTTGGTGAAGTTGTTTACTAGTTTCTTTTTATGGTCTTCTCATTTTGTTAACCTTGGGACTTGTTGGCTTTGTTTTCTACAGCGCGTTTGATAGTATCAACGATGAAGCCGATATTTGTTGGGAACTTTGGGTATGACACCCGGCAATCTGAGCTGGAGCGGGCATTCGCCAAATATGGGAGGGTCGATAGGATCGACATGAAATCTGGTATATTGCAATTTCTTTGTTATACCATGCAGTGTCGTTTTTAACGAAGATGTTCTAATGTTGAATATTTCTATTTCTAAGGTGGTATGAGGGAACTGTGGTGCTTACTTAAATTTTTTTGTTTTTGTTTATTGCGAAACTGTAAATTTCCTTACCTAGTTTTGACATGCGAAGGTAATAGATGTCTGGAAAAGACTGTGTTCAACTTGATTTAGGATATGCGTATTGGATGTTGCATTTGGATTACGGGGTATATTTTAATTAAATGCTGCAATATTCCCAGTGAACCACCTTCCTTTTGTAGTGTGTCGATCTTGGTATTCTCACTAGGACCTGCATATATGTATGCATTCATGGATGACTTTATTGTTTTGGGATTTACAAAGTGTTGTCAATTGTTATTTCCTTGTTTAAACTTTCTAGTTGCTGATCTTTTTCTTGTTACTTATGGGCTTTTAGTTTCGCTTTCATTGTTTGTAATCATCTTAATTACTCTATATTTATTTTTGAATTTTATATTTGTCTTCTGGAATTTTCTTGTCTCTTACCCACCTTCCCTGACATCCTTAATCCTACGTAGTTATCGTTCAGTTAATGATTTTAGACATCTTGGGTTTTCTGGTGTATGAAATTATGGTATTTTAGTGCGAGGATGTTCCACTGGTGCTAATACTTGGTATTTCAGTGCGAGGGATGCTCCACTGACCCTAATACTAGGTACAAAAGTTGTGTCAAGTTTTTATCAATAAGACAAGAAATTGATGTTTTTTTTTTAAAATTCTAAAACCCTGTTCAGTGACATGGATGCATAGCTATTATGCTATGATAATATCCGCTGATCCATTTTTTCTGATGAAAACTTGATGGGAGGCAAAAATTTACTATTTTTATGGGGAAAGCCTCCATATAAGATGTTTCTTTTGACGCAGGAATTTCTACTAAGGAAAATGAACCAAGCTCCTATCTGGGCTCATCACCATCTGTGCATAAAAATTAATTTGGAAGGAAACTTCCTGCTTGCCTGCTTAGCTTCATCTAAAGATATCATCATCCTGATTTTTCTTCAATCAATCATTCGTCATTCATCTACCTCTTCACTTAAGTTGCAATACACCAGAATCGTCTTAATGGATTGATCTTTATCTCATGCCTCATCAATTAAGTCGCAATTCATCAGAATCGTCTTAATGGATGTTCTATATCTCATGCCTTGCCTACCTATCACCTCTGATCATAGGACATCACTGAATTCTGGTCATGCCTTCCATTTGATAATAGTGGCTGAATGAATCTGTCTTGCCATGCCTTCCATTTCTGAACTCGTGCTGTGTGAAAGGCGAAGCATGGTTGAAATTTTGGATTAAAACCTTTAGTATGCAACCATCTTATTTCATCATGCAACGTCTCTACAGCTAAATGTGCATCAGTCTTCCCATATTTTCAGGTGTTGTACTTTTTATAGTTTATCCCAGGGAAAGAAATCATGAGCCTGAGTGACAATACCTGCTAAATAGATAATGCTTCAATATCTTACCGTATTTTATATCTCTAATTGTTCTATTTTGCAGGTTTTGCTTTTGTTTACTTTGAAGACGAGAGGGATGCTGATGATGCTATTCGTGGCCTTGATAACATGCCATTTGGTCATGATAGACGCAGATTGTCTGTGGAATGGGCTAGGGTAGGCCTTTCTCCCACCGTTGTTGCCCCTTTTTTGGGTCTATGCATTTTAGAAGCTGGTTTATTTCATGCTTTGAAAATCTCTCTTTCTTTTCATATATGGCAACCAATAGTTGATTTTAACTTTAGCTTTTTGTTTGGTTTGGTTAGGGTGAACGGGGTCGTCATCGTGATGGATCCAAGTCGATGGCAAATCAGAGGCCAACCAAAACCTTGTTTGTGATCAATTTCGACCCTATTCATACTAGAGTTCGTGATATTGAAAGACATTTTGAACCTTATGGGAAGGTCCTCAATGTTCGCATAAGAAGGAACTTTTCATTTGTACAATTTGAGACGCAGGAGGAGGCAACCAAAGCCCTTGAGTGTACCCACATGAGGTTAGCAGAGTTTTGGGTTTCCCACATGGTTGTTTCTCCTTTCAATTGGCATATTTAATTTCTTTTACTCTCTAAAATACTGTATTGGCTTTATAATTTTGCAGCAAAATATTAGACAGGGTTGTGTCAGTTGAGTATGCTTTGAGGGATGATGGTGAGAGGGGTGACCCTTATGATGATAGCCCCCGGAGAACAGCATATGGGCGGCCTGGGGATAGTCCTTACCGGAGGTCACCTAGTCCGTTGCGCCGTCGACCAAGTCCTGACTATGGGCCACGCAGCCCTGCTTATGACAGGTATAATGGCCCTCGTGAACGACGCAAGAGTCCTGATTATGCTCGGAATCGAAGCCCTGAATATGGCAGATACCGCAGGTAATTTTTTTTTTTTATCTTTTTGATAGTTGGCTCAGCTTCCATTTGAGTTGTTGTCACATATCTCTTTTAGCTTATAAATTCAAGCTAACTCCCCGTTTTTCATAACTATGTGTTGACAGTCGTTCACCCATTCGGAGGTCAAGAACCTGA

mRNA sequence

ATGGATACTCTAACAAGCTCTGTTTCAACTCTCAGAGTTCCATCCACTTTAGCTTCATCTCGCGACCTTCTTCACCTCAAGAATTACTCTGCTCATCTTCCTCATCGCTCTCCTTCTCGCAGATCCAACTCAATCTCCAAACCCCCTAATTTTCTCTCTACTCACAAAACCCTAAATCCGCTTCCGTTTTCTTCTTCCTTCTCCTCTTCCTCCCCACGCCGCTCCTCTTCGCCGTTACTTCACCGTCGGCCTGCTGCTGGATACGCCGCGGCACTCGTCGATGCATCGCAAACTACCGGATCGATTCACTCGGTGGCGAAGGACGTTGGGAGATTCTCGAAGGTGTTGAGAACGAAGCGAATCGGGGGGTTTTTGAACGATCCGTTTGTAGTGGAGGAGGAGAAAGGGCGATTGGTGAGGGAAATTGCGGCGAAGGGAGGGTTTGAGAAACAGGTGGTGAAGTTGACGAAGATGTTGATTGAGAAAAAGAGATTGGGGATTCTGAATGAGGTGTTGAGCGAATTCGAGAGGATTTATGATGAGCTTTGTGGAACTGAAGTGGTTTTGGTTTCTTCCAACAGGAAGATGCAGGAACAGGAGCTGTTTGGGATTGCGAAGAATGTGCAAAGACTTAAAGCTTTGAAAATCCGTGCTGGAACTGGAAATTGTCGTGGTTTTCGAATTTTAGGTCCGGCGACATGGGGGGCTGCATTAGAATTGTTTGACAGAATGCCTATGACATGGGTGGTTTCGTGGACTGCAATTGGTATAATGGGTCTGCTTAGATGGGCTCTTCAAAAAGATACAGGCTTTCTCTTCCTCTTCCTCTCTCCTAGGGTTTTTCTTGTGTTCGAGTCCAAGAATCTGCAAGCGCGTTTGATAGTATCAACGATGAAGCCGATATTTGTTGGGAACTTTGGGTATGACACCCGGCAATCTGAGCTGGAGCGGGCATTCGCCAAATATGGGAGGGTCGATAGGATCGACATGAAATCTGGTTTTGCTTTTGTTTACTTTGAAGACGAGAGGGATGCTGATGATGCTATTCGTGGCCTTGATAACATGCCATTTGGTCATGATAGACGCAGATTGTCTGTGGAATGGGCTAGGGGTGAACGGGGTCGTCATCGTGATGGATCCAAGTCGATGGCAAATCAGAGGCCAACCAAAACCTTGTTTGTGATCAATTTCGACCCTATTCATACTAGAGTTCGTGATATTGAAAGACATTTTGAACCTTATGGGAAGGTCCTCAATGTTCGCATAAGAAGGAACTTTTCATTTGTACAATTTGAGACGCAGGAGGAGGCAACCAAAGCCCTTGAGTGTACCCACATGAGCAAAATATTAGACAGGGTTGTGTCAGTTGAGTATGCTTTGAGGGATGATGGTGAGAGGGGTGACCCTTATGATGATAGCCCCCGGAGAACAGCATATGGGCGGCCTGGGGATAGTCCTTACCGGAGGTCACCTAGTCCGTTGCGCCGTCGACCAAGTCCTGACTATGGGCCACGCAGCCCTGCTTATGACAGGTATAATGGCCCTCGTGAACGACGCAAGAGTCCTGATTATGCTCGGAATCGAAGCCCTGAATATGGCAGATACCGCAGTCGTTCACCCATTCGGAGGTCAAGAACCTGA

Coding sequence (CDS)

ATGGATACTCTAACAAGCTCTGTTTCAACTCTCAGAGTTCCATCCACTTTAGCTTCATCTCGCGACCTTCTTCACCTCAAGAATTACTCTGCTCATCTTCCTCATCGCTCTCCTTCTCGCAGATCCAACTCAATCTCCAAACCCCCTAATTTTCTCTCTACTCACAAAACCCTAAATCCGCTTCCGTTTTCTTCTTCCTTCTCCTCTTCCTCCCCACGCCGCTCCTCTTCGCCGTTACTTCACCGTCGGCCTGCTGCTGGATACGCCGCGGCACTCGTCGATGCATCGCAAACTACCGGATCGATTCACTCGGTGGCGAAGGACGTTGGGAGATTCTCGAAGGTGTTGAGAACGAAGCGAATCGGGGGGTTTTTGAACGATCCGTTTGTAGTGGAGGAGGAGAAAGGGCGATTGGTGAGGGAAATTGCGGCGAAGGGAGGGTTTGAGAAACAGGTGGTGAAGTTGACGAAGATGTTGATTGAGAAAAAGAGATTGGGGATTCTGAATGAGGTGTTGAGCGAATTCGAGAGGATTTATGATGAGCTTTGTGGAACTGAAGTGGTTTTGGTTTCTTCCAACAGGAAGATGCAGGAACAGGAGCTGTTTGGGATTGCGAAGAATGTGCAAAGACTTAAAGCTTTGAAAATCCGTGCTGGAACTGGAAATTGTCGTGGTTTTCGAATTTTAGGTCCGGCGACATGGGGGGCTGCATTAGAATTGTTTGACAGAATGCCTATGACATGGGTGGTTTCGTGGACTGCAATTGGTATAATGGGTCTGCTTAGATGGGCTCTTCAAAAAGATACAGGCTTTCTCTTCCTCTTCCTCTCTCCTAGGGTTTTTCTTGTGTTCGAGTCCAAGAATCTGCAAGCGCGTTTGATAGTATCAACGATGAAGCCGATATTTGTTGGGAACTTTGGGTATGACACCCGGCAATCTGAGCTGGAGCGGGCATTCGCCAAATATGGGAGGGTCGATAGGATCGACATGAAATCTGGTTTTGCTTTTGTTTACTTTGAAGACGAGAGGGATGCTGATGATGCTATTCGTGGCCTTGATAACATGCCATTTGGTCATGATAGACGCAGATTGTCTGTGGAATGGGCTAGGGGTGAACGGGGTCGTCATCGTGATGGATCCAAGTCGATGGCAAATCAGAGGCCAACCAAAACCTTGTTTGTGATCAATTTCGACCCTATTCATACTAGAGTTCGTGATATTGAAAGACATTTTGAACCTTATGGGAAGGTCCTCAATGTTCGCATAAGAAGGAACTTTTCATTTGTACAATTTGAGACGCAGGAGGAGGCAACCAAAGCCCTTGAGTGTACCCACATGAGCAAAATATTAGACAGGGTTGTGTCAGTTGAGTATGCTTTGAGGGATGATGGTGAGAGGGGTGACCCTTATGATGATAGCCCCCGGAGAACAGCATATGGGCGGCCTGGGGATAGTCCTTACCGGAGGTCACCTAGTCCGTTGCGCCGTCGACCAAGTCCTGACTATGGGCCACGCAGCCCTGCTTATGACAGGTATAATGGCCCTCGTGAACGACGCAAGAGTCCTGATTATGCTCGGAATCGAAGCCCTGAATATGGCAGATACCGCAGTCGTTCACCCATTCGGAGGTCAAGAACCTGA

Protein sequence

MDTLTSSVSTLRVPSTLASSRDLLHLKNYSAHLPHRSPSRRSNSISKPPNFLSTHKTLNPLPFSSSFSSSSPRRSSSPLLHRRPAAGYAAALVDASQTTGSIHSVAKDVGRFSKVLRTKRIGGFLNDPFVVEEEKGRLVREIAAKGGFEKQVVKLTKMLIEKKRLGILNEVLSEFERIYDELCGTEVVLVSSNRKMQEQELFGIAKNVQRLKALKIRAGTGNCRGFRILGPATWGAALELFDRMPMTWVVSWTAIGIMGLLRWALQKDTGFLFLFLSPRVFLVFESKNLQARLIVSTMKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPDYARNRSPEYGRYRSRSPIRRSRT

Homology

[Close]

BLAST of Csor.00g108490 vs. ExPASy Swiss-Prot
Match: P92964 (Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana OX=3702 GN=RS31 PE=1 SV=2)

HSP 1 Score: 330.9 bits (847), Expect = 2.8e-89
Identity = 182/263 (69.20%), Postives = 205/263 (77.95%), Query Frame = 0


Query: 298 MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF 357
           M+P+FVGNF Y+TRQS+LER F KYGRVDR+DMKSG+AFVYFEDERDA+DAIR LDN PF
Sbjct: 1   MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPF 60

Query: 358 GHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKV 417
           G+++RRLSVEWA+GERGR R  +K+ +N +PTKTLFVINFDPI T+  DIE+HFEPYGKV
Sbjct: 61  GYEKRRLSVEWAKGERGRPRGDAKAPSNLKPTKTLFVINFDPIRTKEHDIEKHFEPYGKV 120

Query: 418 LNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDD-SPRR 477
            NVRIRRNFSFVQFETQE+ATKALE T  SKILDRVVSVEYAL+DD ER D     SPRR
Sbjct: 121 TNVRIRRNFSFVQFETQEDATKALEATQRSKILDRVVSVEYALKDDDERDDRNGGRSPRR 180

Query: 478 T---AYGRPGDSPYRRSPSPLR-RRPSPDYG-PRSPAYDRYNGPR--ERRKSP------- 537
           +    Y R     Y R PSP + RRPSPDYG  RSP YDRY GP   ERR+SP       
Sbjct: 181 SLSPVYRRRPSPDYGRRPSPGQGRRPSPDYGRARSPEYDRYKGPAAYERRRSPDYGRRSS 240

Query: 538 DYARNRSPEYGRYRSRSPIRRSR 546
           DY R RSP Y RYRSRSP+ R R
Sbjct: 241 DYGRQRSPGYDRYRSRSPVPRGR 263

[Close]

BLAST of Csor.00g108490 vs. ExPASy Swiss-Prot
Match: Q9ZPX8 (Serine/arginine-rich splicing factor RS31A OS=Arabidopsis thaliana OX=3702 GN=RS31A PE=1 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.3e-83
Identity = 172/250 (68.80%), Postives = 199/250 (79.60%), Query Frame = 0


Query: 298 MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF 357
           M+ ++VGNF YDTR S+LER F+K+GRV R+DMKSG+AFVYFEDERDA+DAIR  DN  F
Sbjct: 1   MRHVYVGNFDYDTRHSDLERLFSKFGRVKRVDMKSGYAFVYFEDERDAEDAIRRTDNTTF 60

Query: 358 GHDRRRLSVEWAR---GERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPY 417
           G+ RR+LSVEWA+   GERG+ RDG K+++NQRPTKTLFVINFDPI TR RD+ERHFEPY
Sbjct: 61  GYGRRKLSVEWAKDFQGERGKPRDG-KAVSNQRPTKTLFVINFDPIRTRERDMERHFEPY 120

Query: 418 GKVLNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSP 477
           GKVLNVR+RRNF+FVQF TQE+ATKAL+ TH SK+LD+VVSVEYALR+ GER D Y  S 
Sbjct: 121 GKVLNVRMRRNFAFVQFATQEDATKALDSTHNSKLLDKVVSVEYALREAGEREDRYAGSR 180

Query: 478 RRTAYGRPGDSPYRRSPSPL-RRRPSPDY-GPRSPAYDRYNGPR--ERRKSPDYARNRSP 537
           R            RRSPSP+ RRRPSPDY   RSP YDRY GP   ERRKSPDY R RS 
Sbjct: 181 R------------RRSPSPVYRRRPSPDYTRRRSPEYDRYKGPAPYERRKSPDYGR-RSS 236

Query: 538 EYGRYRSRSP 541
           +YGR R+RSP
Sbjct: 241 DYGRARARSP 236

[Close]

BLAST of Csor.00g108490 vs. ExPASy Swiss-Prot
Match: P92966 (Serine/arginine-rich splicing factor RS41 OS=Arabidopsis thaliana OX=3702 GN=RS41 PE=1 SV=2)

HSP 1 Score: 253.4 bits (646), Expect = 5.6e-66
Identity = 147/275 (53.45%), Postives = 183/275 (66.55%), Query Frame = 0


Query: 298 MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF 357
           MKP+F GNF YD R+S+LER F KYG+V+R+DMK+GFAFVY EDERDA+DAIR LD   +
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 358 GHDRRRLSVEWARGER---GRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPY 417
           G   RRL VEW + +R   GR     +S +  RP+KTLFVINFD  +TR RD+ERHFEPY
Sbjct: 61  GRTGRRLRVEWTKNDRGGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHFEPY 120

Query: 418 GKVLNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPY---- 477
           GK++NVRIRRNF+F+Q+E QE+AT+AL+ T+ SK++D+V+SVEYA++DD  RG+ Y    
Sbjct: 121 GKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYSPER 180

Query: 478 --DDSPRR-----TAYGRPGDSP-YRRSPSPL---RRRPSPDYG------------PRSP 537
             D SP R     + Y R   SP Y R  SP+   R R SPDYG              SP
Sbjct: 181 RRDRSPDRRRRSPSPYRRERGSPDYGRGASPVAHKRERTSPDYGRGRRSPSPYKRARLSP 240

Query: 538 AYDRYNGPRERRKSPD--YARNRSPEYGRYRSRSP 541
            Y R +  RER  SP+    RNRSP  GR  SRSP
Sbjct: 241 DYKRDDRRRERVASPENGAVRNRSPRKGRGESRSP 275

[Close]

BLAST of Csor.00g108490 vs. ExPASy Swiss-Prot
Match: P92965 (Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana OX=3702 GN=RS40 PE=1 SV=2)

HSP 1 Score: 253.1 bits (645), Expect = 7.4e-66
Identity = 144/266 (54.14%), Postives = 182/266 (68.42%), Query Frame = 0


Query: 298 MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF 357
           MKP+F GNF YD R+ +LER F KYG+V+R+DMK+GFAFVY EDERDA+DAIR LD   F
Sbjct: 1   MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60

Query: 358 GHDRRRLSVEWARGERG---RHRDGS-KSMANQRPTKTLFVINFDPIHTRVRDIERHFEP 417
           G   RRL VEW + ERG   R   GS +S ++ RP+KTLFVINFD  +TR RD+E+HFEP
Sbjct: 61  GRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHFEP 120

Query: 418 YGKVLNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDS 477
           YGK++NVRIRRNF+F+Q+E QE+AT+AL+ ++ SK++D+V+SVEYA++DD  RG+ +   
Sbjct: 121 YGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHSPE 180

Query: 478 PRRTAYGRPGDSPYRRSPSPLRR-RPSPDYGPRSPAYDRYNGPRERRKSPDYARNR---- 537
            RR           RRSPSP +R R SPDYG  +     Y   R+ R SPDY R R    
Sbjct: 181 RRRDR----SPERRRRSPSPYKRERGSPDYGRGASPVAAY---RKERTSPDYGRRRSPSP 240

Query: 538 -------SPEYGRYR--SRSPIRRSR 546
                  SPEYGR R  + SP RR R
Sbjct: 241 YKKSRRGSPEYGRDRRGNDSPRRRER 259

[Close]

BLAST of Csor.00g108490 vs. ExPASy Swiss-Prot
Match: P32980 (ATP synthase delta chain, chloroplastic OS=Nicotiana tabacum OX=4097 GN=ATPD PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 3.5e-15
Identity = 44/131 (33.59%), Postives = 73/131 (55.73%), Query Frame = 0


Query: 85  AAGYAAALVDASQTTGSIHSVAKDVGRFSKVLRTKRIGGFLNDPFVVEEEKGRLVREIAA 144
           A  YA AL D +++ G++     D+ +  K+   + +  F   P V EE+K  LV EI +
Sbjct: 66  AGSYANALADIAKSNGTLEQTTADLEKIEKISDDEAVFNFFVSPIVGEEKKRELVDEIVS 125

Query: 145 KGGFEKQVVKLTKMLIEKKRLGILNEVLSEFERIYDELCGTEVVLVSSNRKMQEQELFGI 204
               +  V     +L++ KR+ ++ E++ EFE++Y+ L  TE+ +V+S  K++ Q L  I
Sbjct: 126 SSSIQPHVANFLNILVDMKRVELIKEIVKEFEKVYNTLTDTELAVVTSVVKLESQHLAQI 185

Query: 205 AKNVQRLKALK 216
           AK VQRL   K
Sbjct: 186 AKGVQRLTGSK 196

[Close]

BLAST of Csor.00g108490 vs. NCBI nr
Match: KAG6597062.1 (Serine/arginine-rich splicing factor RS31, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1063 bits (2749), Expect = 0.0
Identity = 546/546 (100.00%), Postives = 546/546 (100.00%), Query Frame = 0


Query: 1   MDTLTSSVSTLRVPSTLASSRDLLHLKNYSAHLPHRSPSRRSNSISKPPNFLSTHKTLNP 60
           MDTLTSSVSTLRVPSTLASSRDLLHLKNYSAHLPHRSPSRRSNSISKPPNFLSTHKTLNP
Sbjct: 1   MDTLTSSVSTLRVPSTLASSRDLLHLKNYSAHLPHRSPSRRSNSISKPPNFLSTHKTLNP 60

Query: 61  LPFSSSFSSSSPRRSSSPLLHRRPAAGYAAALVDASQTTGSIHSVAKDVGRFSKVLRTKR 120
           LPFSSSFSSSSPRRSSSPLLHRRPAAGYAAALVDASQTTGSIHSVAKDVGRFSKVLRTKR
Sbjct: 61  LPFSSSFSSSSPRRSSSPLLHRRPAAGYAAALVDASQTTGSIHSVAKDVGRFSKVLRTKR 120

Query: 121 IGGFLNDPFVVEEEKGRLVREIAAKGGFEKQVVKLTKMLIEKKRLGILNEVLSEFERIYD 180
           IGGFLNDPFVVEEEKGRLVREIAAKGGFEKQVVKLTKMLIEKKRLGILNEVLSEFERIYD
Sbjct: 121 IGGFLNDPFVVEEEKGRLVREIAAKGGFEKQVVKLTKMLIEKKRLGILNEVLSEFERIYD 180

Query: 181 ELCGTEVVLVSSNRKMQEQELFGIAKNVQRLKALKIRAGTGNCRGFRILGPATWGAALEL 240
           ELCGTEVVLVSSNRKMQEQELFGIAKNVQRLKALKIRAGTGNCRGFRILGPATWGAALEL
Sbjct: 181 ELCGTEVVLVSSNRKMQEQELFGIAKNVQRLKALKIRAGTGNCRGFRILGPATWGAALEL 240

Query: 241 FDRMPMTWVVSWTAIGIMGLLRWALQKDTGFLFLFLSPRVFLVFESKNLQARLIVSTMKP 300
           FDRMPMTWVVSWTAIGIMGLLRWALQKDTGFLFLFLSPRVFLVFESKNLQARLIVSTMKP
Sbjct: 241 FDRMPMTWVVSWTAIGIMGLLRWALQKDTGFLFLFLSPRVFLVFESKNLQARLIVSTMKP 300

Query: 301 IFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPFGHD 360
           IFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPFGHD
Sbjct: 301 IFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPFGHD 360

Query: 361 RRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNV 420
           RRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNV
Sbjct: 361 RRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNV 420

Query: 421 RIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYG 480
           RIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYG
Sbjct: 421 RIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYG 480

Query: 481 RPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPDYARNRSPEYGRYRSRSP 540
           RPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPDYARNRSPEYGRYRSRSP
Sbjct: 481 RPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPDYARNRSPEYGRYRSRSP 540

Query: 541 IRRSRT 546
           IRRSRT
Sbjct: 541 IRRSRT 546

[Close]

BLAST of Csor.00g108490 vs. NCBI nr
Match: KAE8650222.1 (hypothetical protein Csa_011015 [Cucumis sativus])

HSP 1 Score: 659 bits (1701), Expect = 4.00e-226
Identity = 355/479 (74.11%), Postives = 388/479 (81.00%), Query Frame = 0


Query: 72  PRRSSSPLLHRRPAAGYAAALVDASQTTGSIHSVAKDVGRFSKVLRTKRIGGFLNDPFVV 131
           PRRSSSPLLHRRPA+GYAAAL+DASQ+TG+IHSVAKDVGRFSK+LR KRIG  LNDP V 
Sbjct: 515 PRRSSSPLLHRRPASGYAAALLDASQSTGTIHSVAKDVGRFSKLLRGKRIGRVLNDPLVG 574

Query: 132 EEEKGRLVREIAAKGGFEKQVVKLTKMLIEKKRLGILNEVLSEFERIYDELCGTEVVLVS 191
           +EEKGRLV+EIA KGGFE+QVVKLTKMLIEK +L IL EV SEFER+YDELCGTEVV+VS
Sbjct: 575 DEEKGRLVKEIAVKGGFERQVVKLTKMLIEKSKLSILTEVFSEFERVYDELCGTEVVMVS 634

Query: 192 SNRKMQEQELFGIAKNVQRLKALKIRAGTGNCRGFRILGPATWGAALELFDRMPMTWVVS 251
           S++KM+E+EL GIAKNVQRL      +G    +GF +L                      
Sbjct: 635 SSKKMEEEELIGIAKNVQRL------SGAIKVKGFSVL---------------------- 694

Query: 252 WTAIGIMGLLRWALQKDTGFLFLFLSPRVFLVFESKNLQARLIVSTMKPIFVGNFGYDTR 311
                                           FES+NLQ R  V+TM+PIFVGNFGYDTR
Sbjct: 695 --------------------------------FESENLQVRSFVATMRPIFVGNFGYDTR 754

Query: 312 QSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARG 371
           QSELER F+KYGRV+RIDMKSGFAFVYFEDERDA+DAIRGLDN+PFG+DRRRLSVEWARG
Sbjct: 755 QSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARG 814

Query: 372 ERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQF 431
           ERGRHRDGSKSMANQRPTKTLFVINFDPI TRVRDIERHFEPYGKVLNVRIRRNF+FVQF
Sbjct: 815 ERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQF 874

Query: 432 ETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTA-YGRPGDSPYRRS 491
           ETQE+ATKALECTHMSKILDRVVSVEYALRDDGERGDP+D+SPRR   YGRPGDSPYRRS
Sbjct: 875 ETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRS 933

Query: 492 PSPL-RRRPSPDYG-PRSPAYDRYNGPRERRKSPDYARNRSPEYG-RYRSRSPIRRSRT 546
           PSP+ RRRPSPDYG   SPAYDRYNGP ERR+SPDY RNRSPEYG R+RSRSPIRRSRT
Sbjct: 935 PSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFRSRSPIRRSRT 933

[Close]

BLAST of Csor.00g108490 vs. NCBI nr
Match: XP_023539917.1 (serine/arginine-rich splicing factor RS31-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 500 bits (1287), Expect = 1.43e-173
Identity = 248/249 (99.60%), Postives = 248/249 (99.60%), Query Frame = 0


Query: 298 MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF 357
           MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF
Sbjct: 1   MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF 60

Query: 358 GHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKV 417
           GHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKV
Sbjct: 61  GHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKV 120

Query: 418 LNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRT 477
           LNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRR 
Sbjct: 121 LNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRA 180

Query: 478 AYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPDYARNRSPEYGRYRS 537
           AYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPDYARNRSPEYGRYRS
Sbjct: 181 AYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPDYARNRSPEYGRYRS 240

Query: 538 RSPIRRSRT 546
           RSPIRRSRT
Sbjct: 241 RSPIRRSRT 249

[Close]

BLAST of Csor.00g108490 vs. NCBI nr
Match: XP_022975392.1 (serine/arginine-rich splicing factor RS31-like [Cucurbita maxima])

HSP 1 Score: 499 bits (1285), Expect = 2.88e-173
Identity = 248/249 (99.60%), Postives = 248/249 (99.60%), Query Frame = 0


Query: 298 MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF 357
           MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF
Sbjct: 1   MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF 60

Query: 358 GHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKV 417
           GHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKV
Sbjct: 61  GHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKV 120

Query: 418 LNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRT 477
           LNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRT
Sbjct: 121 LNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRT 180

Query: 478 AYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPDYARNRSPEYGRYRS 537
           AYG PGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPDYARNRSPEYGRYRS
Sbjct: 181 AYGPPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPDYARNRSPEYGRYRS 240

Query: 538 RSPIRRSRT 546
           RSPIRRSRT
Sbjct: 241 RSPIRRSRT 249

[Close]

BLAST of Csor.00g108490 vs. NCBI nr
Match: XP_022974852.1 (serine/arginine-rich splicing factor RS31-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 496 bits (1277), Expect = 4.71e-172
Identity = 247/249 (99.20%), Postives = 247/249 (99.20%), Query Frame = 0


Query: 298 MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF 357
           MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF
Sbjct: 1   MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF 60

Query: 358 GHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKV 417
           GHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKV
Sbjct: 61  GHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKV 120

Query: 418 LNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRT 477
           LNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRT
Sbjct: 121 LNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRT 180

Query: 478 AYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPDYARNRSPEYGRYRS 537
           AYG PGDSPYRRSPSPLRRRPSPDYGP SPAYDRYNGPRERRKSPDYARNRSPEYGRYRS
Sbjct: 181 AYGPPGDSPYRRSPSPLRRRPSPDYGPCSPAYDRYNGPRERRKSPDYARNRSPEYGRYRS 240

Query: 538 RSPIRRSRT 546
           RSPIRRSRT
Sbjct: 241 RSPIRRSRT 249

[Close]

BLAST of Csor.00g108490 vs. ExPASy TrEMBL
Match: A0A6J1ICY3 (serine/arginine-rich splicing factor RS31-like OS=Cucurbita maxima OX=3661 GN=LOC111474713 PE=4 SV=1)

HSP 1 Score: 499 bits (1285), Expect = 1.39e-173
Identity = 248/249 (99.60%), Postives = 248/249 (99.60%), Query Frame = 0


Query: 298 MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF 357
           MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF
Sbjct: 1   MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF 60

Query: 358 GHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKV 417
           GHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKV
Sbjct: 61  GHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKV 120

Query: 418 LNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRT 477
           LNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRT
Sbjct: 121 LNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRT 180

Query: 478 AYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPDYARNRSPEYGRYRS 537
           AYG PGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPDYARNRSPEYGRYRS
Sbjct: 181 AYGPPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPDYARNRSPEYGRYRS 240

Query: 538 RSPIRRSRT 546
           RSPIRRSRT
Sbjct: 241 RSPIRRSRT 249

[Close]

BLAST of Csor.00g108490 vs. ExPASy TrEMBL
Match: A0A6J1IBE0 (serine/arginine-rich splicing factor RS31-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473622 PE=4 SV=1)

HSP 1 Score: 496 bits (1277), Expect = 2.28e-172
Identity = 247/249 (99.20%), Postives = 247/249 (99.20%), Query Frame = 0


Query: 298 MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF 357
           MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF
Sbjct: 1   MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF 60

Query: 358 GHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKV 417
           GHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKV
Sbjct: 61  GHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKV 120

Query: 418 LNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRT 477
           LNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRT
Sbjct: 121 LNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRT 180

Query: 478 AYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPDYARNRSPEYGRYRS 537
           AYG PGDSPYRRSPSPLRRRPSPDYGP SPAYDRYNGPRERRKSPDYARNRSPEYGRYRS
Sbjct: 181 AYGPPGDSPYRRSPSPLRRRPSPDYGPCSPAYDRYNGPRERRKSPDYARNRSPEYGRYRS 240

Query: 538 RSPIRRSRT 546
           RSPIRRSRT
Sbjct: 241 RSPIRRSRT 249

[Close]

BLAST of Csor.00g108490 vs. ExPASy TrEMBL
Match: A0A6J1FYP8 (serine/arginine-rich splicing factor RS31-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448937 PE=4 SV=1)

HSP 1 Score: 494 bits (1273), Expect = 1.24e-171
Identity = 249/257 (96.89%), Postives = 249/257 (96.89%), Query Frame = 0


Query: 298 MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF 357
           MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF
Sbjct: 1   MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF 60

Query: 358 GHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKV 417
           GHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKV
Sbjct: 61  GHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKV 120

Query: 418 LNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRT 477
           LNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRT
Sbjct: 121 LNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRT 180

Query: 478 AYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPD--------YARNRS 537
           AYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPD        YARNRS
Sbjct: 181 AYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPDCERRKSPDYARNRS 240

Query: 538 PEYGRYRSRSPIRRSRT 546
           PEYGRYRSRSPIRRSRT
Sbjct: 241 PEYGRYRSRSPIRRSRT 257

[Close]

BLAST of Csor.00g108490 vs. ExPASy TrEMBL
Match: A0A6J1D279 (serine/arginine-rich splicing factor RS31-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016334 PE=4 SV=1)

HSP 1 Score: 453 bits (1165), Expect = 2.49e-155
Identity = 230/252 (91.27%), Postives = 241/252 (95.63%), Query Frame = 0


Query: 298 MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF 357
           M+PIFVGNFGYDTRQSELER FAKYGRV+RIDMKSGFAFVYFEDERDA+DAIRGLDNM F
Sbjct: 1   MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAF 60

Query: 358 GHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKV 417
           G+DRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINFDPI TRVRDIERHFEPYGKV
Sbjct: 61  GYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 120

Query: 418 LNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRT 477
           LNVRIRRNF+FVQFETQE+ATKALECTHMSKILDRVVSVEYALRDDGERGDP+D+SPRR 
Sbjct: 121 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 180

Query: 478 AYGRPGDS-PYRRSPSP-LRRRPSPDYG-PRSPAYDRYNGPRERRKSPDYARNRSPEYGR 537
           AYGRPGDS PYRRSPSP  RRRPSPDYG  RSPAYDRYNGP ERR+SPDY RNRSPEYGR
Sbjct: 181 AYGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGR 240

Query: 538 YRSRSPIRRSRT 546
           +RSRSPIRRSRT
Sbjct: 241 FRSRSPIRRSRT 252

[Close]

BLAST of Csor.00g108490 vs. ExPASy TrEMBL
Match: A0A5D3DBI0 (Serine/arginine-rich splicing factor RS31 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00820 PE=4 SV=1)

HSP 1 Score: 447 bits (1151), Expect = 3.42e-153
Identity = 228/253 (90.12%), Postives = 241/253 (95.26%), Query Frame = 0


Query: 298 MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF 357
           M+PIFVGNFGYDTRQSELER F+KYGRV+RIDMKSGFAFVYFEDERDA+DAIRGLDN+PF
Sbjct: 1   MRPIFVGNFGYDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPF 60

Query: 358 GHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKV 417
           G+DRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPI TRVRDIERHFEPYGKV
Sbjct: 61  GYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV 120

Query: 418 LNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRT 477
           LNVRIRRNF+FVQFETQE+ATKALECTHMSKILDRVVSVEYALRDDGERGDP+D+SPRR 
Sbjct: 121 LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA 180

Query: 478 A-YGRPGDSPYRRSPSPL-RRRPSPDYG-PRSPAYDRYNGPRERRKSPDYARNRSPEYG- 537
             YGRPGDSPYRRSPSP+ RRRPSPDYG   SPAYDRYNGP ERR+SPDY RNRSPEYG 
Sbjct: 181 GGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGG 240

Query: 538 RYRSRSPIRRSRT 546
           R+RSRSPIRRSRT
Sbjct: 241 RFRSRSPIRRSRT 253

[Close]

BLAST of Csor.00g108490 vs. TAIR 10
Match: AT3G61860.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 330.9 bits (847), Expect = 2.0e-90
Identity = 182/263 (69.20%), Postives = 205/263 (77.95%), Query Frame = 0


Query: 298 MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF 357
           M+P+FVGNF Y+TRQS+LER F KYGRVDR+DMKSG+AFVYFEDERDA+DAIR LDN PF
Sbjct: 1   MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPF 60

Query: 358 GHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKV 417
           G+++RRLSVEWA+GERGR R  +K+ +N +PTKTLFVINFDPI T+  DIE+HFEPYGKV
Sbjct: 61  GYEKRRLSVEWAKGERGRPRGDAKAPSNLKPTKTLFVINFDPIRTKEHDIEKHFEPYGKV 120

Query: 418 LNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDD-SPRR 477
            NVRIRRNFSFVQFETQE+ATKALE T  SKILDRVVSVEYAL+DD ER D     SPRR
Sbjct: 121 TNVRIRRNFSFVQFETQEDATKALEATQRSKILDRVVSVEYALKDDDERDDRNGGRSPRR 180

Query: 478 T---AYGRPGDSPYRRSPSPLR-RRPSPDYG-PRSPAYDRYNGPR--ERRKSP------- 537
           +    Y R     Y R PSP + RRPSPDYG  RSP YDRY GP   ERR+SP       
Sbjct: 181 SLSPVYRRRPSPDYGRRPSPGQGRRPSPDYGRARSPEYDRYKGPAAYERRRSPDYGRRSS 240

Query: 538 DYARNRSPEYGRYRSRSPIRRSR 546
           DY R RSP Y RYRSRSP+ R R
Sbjct: 241 DYGRQRSPGYDRYRSRSPVPRGR 263

[Close]

BLAST of Csor.00g108490 vs. TAIR 10
Match: AT2G46610.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 311.2 bits (796), Expect = 1.6e-84
Identity = 172/250 (68.80%), Postives = 199/250 (79.60%), Query Frame = 0


Query: 298 MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF 357
           M+ ++VGNF YDTR S+LER F+K+GRV R+DMKSG+AFVYFEDERDA+DAIR  DN  F
Sbjct: 1   MRHVYVGNFDYDTRHSDLERLFSKFGRVKRVDMKSGYAFVYFEDERDAEDAIRRTDNTTF 60

Query: 358 GHDRRRLSVEWAR---GERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPY 417
           G+ RR+LSVEWA+   GERG+ RDG K+++NQRPTKTLFVINFDPI TR RD+ERHFEPY
Sbjct: 61  GYGRRKLSVEWAKDFQGERGKPRDG-KAVSNQRPTKTLFVINFDPIRTRERDMERHFEPY 120

Query: 418 GKVLNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSP 477
           GKVLNVR+RRNF+FVQF TQE+ATKAL+ TH SK+LD+VVSVEYALR+ GER D Y  S 
Sbjct: 121 GKVLNVRMRRNFAFVQFATQEDATKALDSTHNSKLLDKVVSVEYALREAGEREDRYAGSR 180

Query: 478 RRTAYGRPGDSPYRRSPSPL-RRRPSPDY-GPRSPAYDRYNGPR--ERRKSPDYARNRSP 537
           R            RRSPSP+ RRRPSPDY   RSP YDRY GP   ERRKSPDY R RS 
Sbjct: 181 R------------RRSPSPVYRRRPSPDYTRRRSPEYDRYKGPAPYERRKSPDYGR-RSS 236

Query: 538 EYGRYRSRSP 541
           +YGR R+RSP
Sbjct: 241 DYGRARARSP 236

[Close]

BLAST of Csor.00g108490 vs. TAIR 10
Match: AT2G46610.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 261.2 bits (666), Expect = 1.9e-69
Identity = 149/220 (67.73%), Postives = 172/220 (78.18%), Query Frame = 0


Query: 328 IDMKSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWAR---GERGRHRDGSKSMA 387
           + + +G+AFVYFEDERDA+DAIR  DN  FG+ RR+LSVEWA+   GERG+ RDG K+++
Sbjct: 5   LHIDAGYAFVYFEDERDAEDAIRRTDNTTFGYGRRKLSVEWAKDFQGERGKPRDG-KAVS 64

Query: 388 NQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFETQEEATKALECT 447
           NQRPTKTLFVINFDPI TR RD+ERHFEPYGKVLNVR+RRNF+FVQF TQE+ATKAL+ T
Sbjct: 65  NQRPTKTLFVINFDPIRTRERDMERHFEPYGKVLNVRMRRNFAFVQFATQEDATKALDST 124

Query: 448 HMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPL-RRRPSPDY- 507
           H SK+LD+VVSVEYALR+ GER D Y  S R            RRSPSP+ RRRPSPDY 
Sbjct: 125 HNSKLLDKVVSVEYALREAGEREDRYAGSRR------------RRSPSPVYRRRPSPDYT 184

Query: 508 GPRSPAYDRYNGPR--ERRKSPDYARNRSPEYGRYRSRSP 541
             RSP YDRY GP   ERRKSPDY R RS +YGR R+RSP
Sbjct: 185 RRRSPEYDRYKGPAPYERRKSPDYGR-RSSDYGRARARSP 210

[Close]

BLAST of Csor.00g108490 vs. TAIR 10
Match: AT5G52040.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 253.4 bits (646), Expect = 4.0e-67
Identity = 147/275 (53.45%), Postives = 183/275 (66.55%), Query Frame = 0


Query: 298 MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF 357
           MKP+F GNF YD R+S+LER F KYG+V+R+DMK+GFAFVY EDERDA+DAIR LD   +
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 358 GHDRRRLSVEWARGER---GRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPY 417
           G   RRL VEW + +R   GR     +S +  RP+KTLFVINFD  +TR RD+ERHFEPY
Sbjct: 61  GRTGRRLRVEWTKNDRGGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHFEPY 120

Query: 418 GKVLNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPY---- 477
           GK++NVRIRRNF+F+Q+E QE+AT+AL+ T+ SK++D+V+SVEYA++DD  RG+ Y    
Sbjct: 121 GKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYSPER 180

Query: 478 --DDSPRR-----TAYGRPGDSP-YRRSPSPL---RRRPSPDYG------------PRSP 537
             D SP R     + Y R   SP Y R  SP+   R R SPDYG              SP
Sbjct: 181 RRDRSPDRRRRSPSPYRRERGSPDYGRGASPVAHKRERTSPDYGRGRRSPSPYKRARLSP 240

Query: 538 AYDRYNGPRERRKSPD--YARNRSPEYGRYRSRSP 541
            Y R +  RER  SP+    RNRSP  GR  SRSP
Sbjct: 241 DYKRDDRRRERVASPENGAVRNRSPRKGRGESRSP 275

[Close]

BLAST of Csor.00g108490 vs. TAIR 10
Match: AT5G52040.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 253.4 bits (646), Expect = 4.0e-67
Identity = 147/275 (53.45%), Postives = 183/275 (66.55%), Query Frame = 0


Query: 298 MKPIFVGNFGYDTRQSELERAFAKYGRVDRIDMKSGFAFVYFEDERDADDAIRGLDNMPF 357
           MKP+F GNF YD R+S+LER F KYG+V+R+DMK+GFAFVY EDERDA+DAIR LD   +
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 358 GHDRRRLSVEWARGER---GRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPY 417
           G   RRL VEW + +R   GR     +S +  RP+KTLFVINFD  +TR RD+ERHFEPY
Sbjct: 61  GRTGRRLRVEWTKNDRGGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHFEPY 120

Query: 418 GKVLNVRIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPY---- 477
           GK++NVRIRRNF+F+Q+E QE+AT+AL+ T+ SK++D+V+SVEYA++DD  RG+ Y    
Sbjct: 121 GKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYSPER 180

Query: 478 --DDSPRR-----TAYGRPGDSP-YRRSPSPL---RRRPSPDYG------------PRSP 537
             D SP R     + Y R   SP Y R  SP+   R R SPDYG              SP
Sbjct: 181 RRDRSPDRRRRSPSPYRRERGSPDYGRGASPVAHKRERTSPDYGRGRRSPSPYKRARLSP 240

Query: 538 AYDRYNGPRERRKSPD--YARNRSPEYGRYRSRSP 541
            Y R +  RER  SP+    RNRSP  GR  SRSP
Sbjct: 241 DYKRDDRRRERVASPENGAVRNRSPRKGRGESRSP 275

The following BLAST results are available for this feature:

BLAST of Csor.00g108490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92964	2.8e-89	69.20	Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana OX=3702 GN=RS3...	[more]
Q9ZPX8	2.3e-83	68.80	Serine/arginine-rich splicing factor RS31A OS=Arabidopsis thaliana OX=3702 GN=RS...	[more]
P92966	5.6e-66	53.45	Serine/arginine-rich splicing factor RS41 OS=Arabidopsis thaliana OX=3702 GN=RS4...	[more]
P92965	7.4e-66	54.14	Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana OX=3702 GN=RS4...	[more]
P32980	3.5e-15	33.59	ATP synthase delta chain, chloroplastic OS=Nicotiana tabacum OX=4097 GN=ATPD PE=...	[more]

BLAST of Csor.00g108490 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597062.1	0.0	100.00	Serine/arginine-rich splicing factor RS31, partial [Cucurbita argyrosperma subsp...	[more]
KAE8650222.1	4.00e-226	74.11	hypothetical protein Csa_011015 [Cucumis sativus]	[more]
XP_023539917.1	1.43e-173	99.60	serine/arginine-rich splicing factor RS31-like isoform X1 [Cucurbita pepo subsp....	[more]
XP_022975392.1	2.88e-173	99.60	serine/arginine-rich splicing factor RS31-like [Cucurbita maxima]	[more]
XP_022974852.1	4.71e-172	99.20	serine/arginine-rich splicing factor RS31-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Csor.00g108490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ICY3	1.39e-173	99.60	serine/arginine-rich splicing factor RS31-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1IBE0	2.28e-172	99.20	serine/arginine-rich splicing factor RS31-like isoform X1 OS=Cucurbita maxima OX...	[more]
A0A6J1FYP8	1.24e-171	96.89	serine/arginine-rich splicing factor RS31-like isoform X1 OS=Cucurbita moschata ...	[more]
A0A6J1D279	2.49e-155	91.27	serine/arginine-rich splicing factor RS31-like isoform X1 OS=Momordica charantia...	[more]
A0A5D3DBI0	3.42e-153	90.12	Serine/arginine-rich splicing factor RS31 isoform X2 OS=Cucumis melo var. makuwa...	[more]

BLAST of Csor.00g108490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61860.1	2.0e-90	69.20	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G46610.1	1.6e-84	68.80	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G46610.2	1.9e-69	67.73	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G52040.1	4.0e-67	53.45	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G52040.2	4.0e-67	53.45	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 300..367 e-value: 6.2E-15 score: 65.6 coord: 391..457 e-value: 3.0E-15 score: 66.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 301..358 e-value: 7.0E-15 score: 54.6 coord: 392..454 e-value: 4.0E-10 score: 39.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 299..371 score: 16.909462
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 390..461 score: 14.760482
IPR000711	ATPase, OSCP/delta subunit	PFAM	PF00213	OSCP	coord: 87..211 e-value: 4.8E-18 score: 65.9
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 384..468 e-value: 2.3E-17 score: 64.9
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 295..383 e-value: 1.5E-20 score: 75.2
IPR026015	F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily	GENE3D	1.10.520.20		coord: 85..176 e-value: 7.7E-17 score: 63.7
IPR026015	F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily	SUPERFAMILY	47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase	coord: 86..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 463..478
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 511..538
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 463..546
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 301..514
None	No IPR available	CDD	cd12234	RRM1_AtRSp31_like	coord: 299..370 e-value: 3.98145E-37 score: 129.941
None	No IPR available	CDD	cd12466	RRM2_AtRSp31_like	coord: 391..460 e-value: 4.59504E-40 score: 137.68
IPR029537	Arginine/serine-rich-splicing factor RSP31/31A	PANTHER	PTHR23147:SF146	SERINE/ARGININE-RICH SPLICING FACTOR RS31-RELATED	coord: 301..514
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 301..464

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g108490.m02	Csor.00g108490.m02	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0016607	nuclear speck
cellular_component	GO:0005681	spliceosomal complex
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding