Csor.00g108430 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g108430
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	DNA-directed RNA polymerase II subunit 1-like
Location	Csor_Chr06: 7699426 .. 7700745 (+)
RNA-Seq Expression	Csor.00g108430
Synteny	Csor.00g108430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGGTCGTCTTCGTCGCTCGATGTTTCGTCTTTCTTCCTTTAAGCGACCTTTTATCCATGGTGGCAGTAATTCAAGACAAGATTCAGGTCAATATGACGGTCGATATCCTTCAACCAGCAAAGAGTCATCGATCGAACCACGGGCTCGCTCACCGTCGCTTTCGCCCAAGAGAGAGTCCGTTGCTGCTTCTCCGACATACTCTGTGAAGAAGGTTGCTTCACCGTCTCCTTCTCCATCGTATGGAGGTTCAAGTGGAGGAGTGATGAGCTCACAACCGAAGGCTGTAGATGAAGACCTTAAGGATAAACCTACTACTCAACCCAGGTTGGTTACACTAAACTCAAACACTTCTTCATGTTAGTCATCATCTATATGCTAAGGACCATTCATTGCACGTCAATCGTGGTTTATATTAAAAAAAAGAAATTTGCATGTCGATCTGATTACCATCTATGCTAATAGGTTATGATTTATGAACTATTAGGTTAATTATGTTTGGTGAGAAGAACCAAACATTTTTTTATAAGAGCGGAAATTTCTTCTTAGAGTTTTAAAAATCTTGAGGTAAAGTCTAAAAAGGAAATCCTACGAGAAAGAGCGCTAGCGAGGACGTTGGGCCTTGAAGGGGATGGATTGTGAGATACCAGTTGGGGTGGAGAATAAAGACGTTAGGCCCTGAAGGGGTGGATTGTGAGATCCCAGTTGGGGTGGAGAACAAAGCACCCTTTATAAAGGTGTGAAAAAGTGGAAATCTTTTCGTGATATTCGCGTTTTAAAAAACCTTACGGAGAAGTTCAAAAGGAAAACTCAAAGATGACAATATCAGCTCAGCGAGCTGTTAATATATTATTAAATTCAAACGCTTAATTAATTAAGTTGACAAACTCTAATATATTTAGTCATTTACTCATATTCTTGACACAGATCACTTGAAACCGAGCCTAAAGCGGTGGTCGGAAAAGCCACAAAGAAAGTGACTGATTCGGATCGTCGCATCGAGTCGAACAATACGACGATGACATCCCACAAGCATGAGCCAAATACAATAAAGATTGCAGGAGAAAATCATGGGGCAGTAATGGAAATCTTCGAGTTAAAAGGGGAAGTGGGAGATATGATAGAGAAGAAAGAGAGATTTAGAAGAACATTAAACAGGAAGGCAAAGGATCAAAACAAGGAAGGGTGCAAGGACCAGAATGGCGAAAGCACTTATTTGAACAGCAATGTTCAGGGCGTAAACAATTCTATTCTTTACGGTGCTTCTTTGGCTCACCATGACCCGGGTTTGCACCACGCTCTCTCCTTAAAACCATGA

mRNA sequence

ATGGCGGGTCGTCTTCGTCGCTCGATGTTTCGTCTTTCTTCCTTTAAGCGACCTTTTATCCATGGTGGCAGTAATTCAAGACAAGATTCAGGTCAATATGACGGTCGATATCCTTCAACCAGCAAAGAGTCATCGATCGAACCACGGGCTCGCTCACCGTCGCTTTCGCCCAAGAGAGAGTCCGTTGCTGCTTCTCCGACATACTCTGTGAAGAAGGTTGCTTCACCGTCTCCTTCTCCATCGTATGGAGGTTCAAGTGGAGGAGTGATGAGCTCACAACCGAAGGCTGTAGATGAAGACCTTAAGGATAAACCTACTACTCAACCCAGATCACTTGAAACCGAGCCTAAAGCGGTGGTCGGAAAAGCCACAAAGAAAGTGACTGATTCGGATCGTCGCATCGAGTCGAACAATACGACGATGACATCCCACAAGCATGAGCCAAATACAATAAAGATTGCAGGAGAAAATCATGGGGCAGTAATGGAAATCTTCGAGTTAAAAGGGGAAGTGGGAGATATGATAGAGAAGAAAGAGAGATTTAGAAGAACATTAAACAGGAAGGCAAAGGATCAAAACAAGGAAGGGTGCAAGGACCAGAATGGCGAAAGCACTTATTTGAACAGCAATGTTCAGGGCGTAAACAATTCTATTCTTTACGGTGCTTCTTTGGCTCACCATGACCCGGGTTTGCACCACGCTCTCTCCTTAAAACCATGA

Coding sequence (CDS)

ATGGCGGGTCGTCTTCGTCGCTCGATGTTTCGTCTTTCTTCCTTTAAGCGACCTTTTATCCATGGTGGCAGTAATTCAAGACAAGATTCAGGTCAATATGACGGTCGATATCCTTCAACCAGCAAAGAGTCATCGATCGAACCACGGGCTCGCTCACCGTCGCTTTCGCCCAAGAGAGAGTCCGTTGCTGCTTCTCCGACATACTCTGTGAAGAAGGTTGCTTCACCGTCTCCTTCTCCATCGTATGGAGGTTCAAGTGGAGGAGTGATGAGCTCACAACCGAAGGCTGTAGATGAAGACCTTAAGGATAAACCTACTACTCAACCCAGATCACTTGAAACCGAGCCTAAAGCGGTGGTCGGAAAAGCCACAAAGAAAGTGACTGATTCGGATCGTCGCATCGAGTCGAACAATACGACGATGACATCCCACAAGCATGAGCCAAATACAATAAAGATTGCAGGAGAAAATCATGGGGCAGTAATGGAAATCTTCGAGTTAAAAGGGGAAGTGGGAGATATGATAGAGAAGAAAGAGAGATTTAGAAGAACATTAAACAGGAAGGCAAAGGATCAAAACAAGGAAGGGTGCAAGGACCAGAATGGCGAAAGCACTTATTTGAACAGCAATGTTCAGGGCGTAAACAATTCTATTCTTTACGGTGCTTCTTTGGCTCACCATGACCCGGGTTTGCACCACGCTCTCTCCTTAAAACCATGA

Protein sequence

MAGRLRRSMFRLSSFKRPFIHGGSNSRQDSGQYDGRYPSTSKESSIEPRARSPSLSPKRESVAASPTYSVKKVASPSPSPSYGGSSGGVMSSQPKAVDEDLKDKPTTQPRSLETEPKAVVGKATKKVTDSDRRIESNNTTMTSHKHEPNTIKIAGENHGAVMEIFELKGEVGDMIEKKERFRRTLNRKAKDQNKEGCKDQNGESTYLNSNVQGVNNSILYGASLAHHDPGLHHALSLKP

Homology

[Close]

BLAST of Csor.00g108430 vs. NCBI nr
Match: KAG6597056.1 (hypothetical protein SDJN03_10236, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 454 bits (1168), Expect = 1.16e-160
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1   MAGRLRRSMFRLSSFKRPFIHGGSNSRQDSGQYDGRYPSTSKESSIEPRARSPSLSPKRE 60
           MAGRLRRSMFRLSSFKRPFIHGGSNSRQDSGQYDGRYPSTSKESSIEPRARSPSLSPKRE
Sbjct: 1   MAGRLRRSMFRLSSFKRPFIHGGSNSRQDSGQYDGRYPSTSKESSIEPRARSPSLSPKRE 60

Query: 61  SVAASPTYSVKKVASPSPSPSYGGSSGGVMSSQPKAVDEDLKDKPTTQPRSLETEPKAVV 120
           SVAASPTYSVKKVASPSPSPSYGGSSGGVMSSQPKAVDEDLKDKPTTQPRSLETEPKAVV
Sbjct: 61  SVAASPTYSVKKVASPSPSPSYGGSSGGVMSSQPKAVDEDLKDKPTTQPRSLETEPKAVV 120

Query: 121 GKATKKVTDSDRRIESNNTTMTSHKHEPNTIKIAGENHGAVMEIFELKGEVGDMIEKKER 180
           GKATKKVTDSDRRIESNNTTMTSHKHEPNTIKIAGENHGAVMEIFELKGEVGDMIEKKER
Sbjct: 121 GKATKKVTDSDRRIESNNTTMTSHKHEPNTIKIAGENHGAVMEIFELKGEVGDMIEKKER 180

Query: 181 FRRTLNRKAKDQNKEGCKDQNGESTYLNSNVQGVNNSILYGASLAHHDPGLHHALSLKP 239
           FRRTLNRKAKDQNKEGCKDQNGESTYLNSNVQGVNNSILYGASLAHHDPGLHHALSLKP
Sbjct: 181 FRRTLNRKAKDQNKEGCKDQNGESTYLNSNVQGVNNSILYGASLAHHDPGLHHALSLKP 239

[Close]

BLAST of Csor.00g108430 vs. NCBI nr
Match: XP_022945689.1 (uncharacterized protein LOC111449843 [Cucurbita moschata])

HSP 1 Score: 439 bits (1130), Expect = 7.21e-155
Identity = 232/239 (97.07%), Postives = 234/239 (97.91%), Query Frame = 0


Query: 1   MAGRLRRSMFRLSSFKRPFIHGGSNSRQDSGQYDGRYPSTSKESSIEPRARSPSLSPKRE 60
           MAGRLRRSMFRLSSFKRPFIHGGSNSRQDSGQYDGRYPST KESS+EPRARSPSLSPKRE
Sbjct: 1   MAGRLRRSMFRLSSFKRPFIHGGSNSRQDSGQYDGRYPSTRKESSMEPRARSPSLSPKRE 60

Query: 61  SVAASPTYSVKKVASPSPSPSYGGSSGGVMSSQPKAVDEDLKDKPTTQPRSLETEPKAVV 120
           SVAASPTYSVKKVASPSPSPSYGGSSGGVMSSQPKAVDEDLKDKPTTQPRS ETEPKAVV
Sbjct: 61  SVAASPTYSVKKVASPSPSPSYGGSSGGVMSSQPKAVDEDLKDKPTTQPRSPETEPKAVV 120

Query: 121 GKATKKVTDSDRRIESNNTTMTSHKHEPNTIKIAGENHGAVMEIFELKGEVGDMIEKKER 180
           GKATKKVTDSDRRIES+ TTMTSHKHEPNTIKIAGENHGAVMEIFELKGE GDMIEKKER
Sbjct: 121 GKATKKVTDSDRRIESSKTTMTSHKHEPNTIKIAGENHGAVMEIFELKGEEGDMIEKKER 180

Query: 181 FRRTLNRKAKDQNKEGCKDQNGESTYLNSNVQGVNNSILYGASLAHHDPGLHHALSLKP 239
           FRRTLNRKAKDQNKEGCKDQ GESTYLNSNVQGVNNSILYGASLAHHDPGLHHALSLKP
Sbjct: 181 FRRTLNRKAKDQNKEGCKDQKGESTYLNSNVQGVNNSILYGASLAHHDPGLHHALSLKP 239

[Close]

BLAST of Csor.00g108430 vs. NCBI nr
Match: XP_023540123.1 (uncharacterized protein LOC111800588 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 399 bits (1024), Expect = 1.03e-138
Identity = 216/239 (90.38%), Postives = 222/239 (92.89%), Query Frame = 0


Query: 1   MAGRLRRSMFRLSSFKRPFIHGGSNSRQDSGQYDGRYPSTSKESSIEPRARSPSLSPKRE 60
           MAGRLRRSMFRLSSFKRPFIHGGSNSRQDSG    RYPSTSKESS+EPRARSPS+SPKRE
Sbjct: 1   MAGRLRRSMFRLSSFKRPFIHGGSNSRQDSG----RYPSTSKESSMEPRARSPSVSPKRE 60

Query: 61  SVAASPTYSVKKVASPSPSPSYGGSSGGVMSSQPKAVDEDLKDKPTTQPRSLETEPKAVV 120
           SVAASPTYSVKKVASPSPSPSYGGSSGGVMSSQPKAVDE +KDKPTTQPRS ETEPKAVV
Sbjct: 61  SVAASPTYSVKKVASPSPSPSYGGSSGGVMSSQPKAVDEYVKDKPTTQPRSPETEPKAVV 120

Query: 121 GKATKKVTDSDRRIESNNTTMTSHKHEPNTIKIAGENHGAVMEIFELKGEVGDMIEKKER 180
           GKA KKVTDSDR +ES+  TMTSHKHEPNTIKIAGENHGAVMEIFELKGE  DMIEKKER
Sbjct: 121 GKAMKKVTDSDRHVESSKRTMTSHKHEPNTIKIAGENHGAVMEIFELKGEERDMIEKKER 180

Query: 181 FRRTLNRKAKDQNKEGCKDQNGESTYLNSNVQGVNNSILYGASLAHHDPGLHHALSLKP 239
           FRRTL+ KA DQNKEG KD  GESTYLNSNVQGVNNSILYGASLAHHDPGLHHALSLKP
Sbjct: 181 FRRTLSSKANDQNKEGSKDHRGESTYLNSNVQGVNNSILYGASLAHHDPGLHHALSLKP 235

[Close]

BLAST of Csor.00g108430 vs. NCBI nr
Match: XP_022975569.1 (uncharacterized protein LOC111475114 isoform X3 [Cucurbita maxima])

HSP 1 Score: 391 bits (1005), Expect = 6.98e-136
Identity = 213/239 (89.12%), Postives = 220/239 (92.05%), Query Frame = 0


Query: 1   MAGRLRRSMFRLSSFKRPFIHGGSNSRQDSGQYDGRYPSTSKESSIEPRARSPSLSPKRE 60
           MAGRLRRSMFRLSS KRPFIHGGSNSRQDSG Y    PSTSKESS+EPRARSPSLSPKRE
Sbjct: 1   MAGRLRRSMFRLSSIKRPFIHGGSNSRQDSGPY----PSTSKESSMEPRARSPSLSPKRE 60

Query: 61  SVAASPTYSVKKVASPSPSPSYGGSSGGVMSSQPKAVDEDLKDKPTTQPRSLETEPKAVV 120
           SVAASP YSVKKVASPSPSPSYGGS+GGV++SQPKAVDE LKDKPTTQPRS ETEPKAVV
Sbjct: 61  SVAASPMYSVKKVASPSPSPSYGGSAGGVINSQPKAVDEYLKDKPTTQPRSPETEPKAVV 120

Query: 121 GKATKKVTDSDRRIESNNTTMTSHKHEPNTIKIAGENHGAVMEIFELKGEVGDMIEKKER 180
           GKA KKV DSD   ES+ TTMTSHKHEPNTIKIAGENHGAVMEIFELKGE GDMIEKKE 
Sbjct: 121 GKAMKKVIDSDCHGESSKTTMTSHKHEPNTIKIAGENHGAVMEIFELKGEGGDMIEKKET 180

Query: 181 FRRTLNRKAKDQNKEGCKDQNGESTYLNSNVQGVNNSILYGASLAHHDPGLHHALSLKP 239
           FRRT NRKAKDQNKEGCK++ GESTYLNSNVQGVNNSILYGASLAHHDPGLHHALSLKP
Sbjct: 181 FRRTSNRKAKDQNKEGCKEKKGESTYLNSNVQGVNNSILYGASLAHHDPGLHHALSLKP 235

[Close]

BLAST of Csor.00g108430 vs. NCBI nr
Match: XP_022975568.1 (uncharacterized protein LOC111475114 isoform X2 [Cucurbita maxima])

HSP 1 Score: 371 bits (952), Expect = 1.35e-127
Identity = 203/229 (88.65%), Postives = 210/229 (91.70%), Query Frame = 0


Query: 1   MAGRLRRSMFRLSSFKRPFIHGGSNSRQDSGQYDGRYPSTSKESSIEPRARSPSLSPKRE 60
           MAGRLRRSMFRLSS KRPFIHGGSNSRQDSG Y    PSTSKESS+EPRARSPSLSPKRE
Sbjct: 1   MAGRLRRSMFRLSSIKRPFIHGGSNSRQDSGPY----PSTSKESSMEPRARSPSLSPKRE 60

Query: 61  SVAASPTYSVKKVASPSPSPSYGGSSGGVMSSQPKAVDEDLKDKPTTQPRSLETEPKAVV 120
           SVAASP YSVKKVASPSPSPSYGGS+GGV++SQPKAVDE LKDKPTTQPRS ETEPKAVV
Sbjct: 61  SVAASPMYSVKKVASPSPSPSYGGSAGGVINSQPKAVDEYLKDKPTTQPRSPETEPKAVV 120

Query: 121 GKATKKVTDSDRRIESNNTTMTSHKHEPNTIKIAGENHGAVMEIFELKGEVGDMIEKKER 180
           GKA KKV DSD   ES+ TTMTSHKHEPNTIKIAGENHGAVMEIFELKGE GDMIEKKE 
Sbjct: 121 GKAMKKVIDSDCHGESSKTTMTSHKHEPNTIKIAGENHGAVMEIFELKGEGGDMIEKKET 180

Query: 181 FRRTLNRKAKDQNKEGCKDQNGESTYLNSNVQGVNNSILYGASLAHHDP 229
           FRRT NRKAKDQNKEGCK++ GESTYLNSNVQGVNNSILYGASLAHHDP
Sbjct: 181 FRRTSNRKAKDQNKEGCKEKKGESTYLNSNVQGVNNSILYGASLAHHDP 225

[Close]

BLAST of Csor.00g108430 vs. ExPASy TrEMBL
Match: A0A6J1G1N7 (uncharacterized protein LOC111449843 OS=Cucurbita moschata OX=3662 GN=LOC111449843 PE=4 SV=1)

HSP 1 Score: 439 bits (1130), Expect = 3.49e-155
Identity = 232/239 (97.07%), Postives = 234/239 (97.91%), Query Frame = 0


Query: 1   MAGRLRRSMFRLSSFKRPFIHGGSNSRQDSGQYDGRYPSTSKESSIEPRARSPSLSPKRE 60
           MAGRLRRSMFRLSSFKRPFIHGGSNSRQDSGQYDGRYPST KESS+EPRARSPSLSPKRE
Sbjct: 1   MAGRLRRSMFRLSSFKRPFIHGGSNSRQDSGQYDGRYPSTRKESSMEPRARSPSLSPKRE 60

Query: 61  SVAASPTYSVKKVASPSPSPSYGGSSGGVMSSQPKAVDEDLKDKPTTQPRSLETEPKAVV 120
           SVAASPTYSVKKVASPSPSPSYGGSSGGVMSSQPKAVDEDLKDKPTTQPRS ETEPKAVV
Sbjct: 61  SVAASPTYSVKKVASPSPSPSYGGSSGGVMSSQPKAVDEDLKDKPTTQPRSPETEPKAVV 120

Query: 121 GKATKKVTDSDRRIESNNTTMTSHKHEPNTIKIAGENHGAVMEIFELKGEVGDMIEKKER 180
           GKATKKVTDSDRRIES+ TTMTSHKHEPNTIKIAGENHGAVMEIFELKGE GDMIEKKER
Sbjct: 121 GKATKKVTDSDRRIESSKTTMTSHKHEPNTIKIAGENHGAVMEIFELKGEEGDMIEKKER 180

Query: 181 FRRTLNRKAKDQNKEGCKDQNGESTYLNSNVQGVNNSILYGASLAHHDPGLHHALSLKP 239
           FRRTLNRKAKDQNKEGCKDQ GESTYLNSNVQGVNNSILYGASLAHHDPGLHHALSLKP
Sbjct: 181 FRRTLNRKAKDQNKEGCKDQKGESTYLNSNVQGVNNSILYGASLAHHDPGLHHALSLKP 239

[Close]

BLAST of Csor.00g108430 vs. ExPASy TrEMBL
Match: A0A6J1IKZ2 (uncharacterized protein LOC111475114 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111475114 PE=4 SV=1)

HSP 1 Score: 391 bits (1005), Expect = 3.38e-136
Identity = 213/239 (89.12%), Postives = 220/239 (92.05%), Query Frame = 0


Query: 1   MAGRLRRSMFRLSSFKRPFIHGGSNSRQDSGQYDGRYPSTSKESSIEPRARSPSLSPKRE 60
           MAGRLRRSMFRLSS KRPFIHGGSNSRQDSG Y    PSTSKESS+EPRARSPSLSPKRE
Sbjct: 1   MAGRLRRSMFRLSSIKRPFIHGGSNSRQDSGPY----PSTSKESSMEPRARSPSLSPKRE 60

Query: 61  SVAASPTYSVKKVASPSPSPSYGGSSGGVMSSQPKAVDEDLKDKPTTQPRSLETEPKAVV 120
           SVAASP YSVKKVASPSPSPSYGGS+GGV++SQPKAVDE LKDKPTTQPRS ETEPKAVV
Sbjct: 61  SVAASPMYSVKKVASPSPSPSYGGSAGGVINSQPKAVDEYLKDKPTTQPRSPETEPKAVV 120

Query: 121 GKATKKVTDSDRRIESNNTTMTSHKHEPNTIKIAGENHGAVMEIFELKGEVGDMIEKKER 180
           GKA KKV DSD   ES+ TTMTSHKHEPNTIKIAGENHGAVMEIFELKGE GDMIEKKE 
Sbjct: 121 GKAMKKVIDSDCHGESSKTTMTSHKHEPNTIKIAGENHGAVMEIFELKGEGGDMIEKKET 180

Query: 181 FRRTLNRKAKDQNKEGCKDQNGESTYLNSNVQGVNNSILYGASLAHHDPGLHHALSLKP 239
           FRRT NRKAKDQNKEGCK++ GESTYLNSNVQGVNNSILYGASLAHHDPGLHHALSLKP
Sbjct: 181 FRRTSNRKAKDQNKEGCKEKKGESTYLNSNVQGVNNSILYGASLAHHDPGLHHALSLKP 235

[Close]

BLAST of Csor.00g108430 vs. ExPASy TrEMBL
Match: A0A6J1IJL2 (uncharacterized protein LOC111475114 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111475114 PE=4 SV=1)

HSP 1 Score: 371 bits (952), Expect = 6.56e-128
Identity = 203/229 (88.65%), Postives = 210/229 (91.70%), Query Frame = 0


Query: 1   MAGRLRRSMFRLSSFKRPFIHGGSNSRQDSGQYDGRYPSTSKESSIEPRARSPSLSPKRE 60
           MAGRLRRSMFRLSS KRPFIHGGSNSRQDSG Y    PSTSKESS+EPRARSPSLSPKRE
Sbjct: 1   MAGRLRRSMFRLSSIKRPFIHGGSNSRQDSGPY----PSTSKESSMEPRARSPSLSPKRE 60

Query: 61  SVAASPTYSVKKVASPSPSPSYGGSSGGVMSSQPKAVDEDLKDKPTTQPRSLETEPKAVV 120
           SVAASP YSVKKVASPSPSPSYGGS+GGV++SQPKAVDE LKDKPTTQPRS ETEPKAVV
Sbjct: 61  SVAASPMYSVKKVASPSPSPSYGGSAGGVINSQPKAVDEYLKDKPTTQPRSPETEPKAVV 120

Query: 121 GKATKKVTDSDRRIESNNTTMTSHKHEPNTIKIAGENHGAVMEIFELKGEVGDMIEKKER 180
           GKA KKV DSD   ES+ TTMTSHKHEPNTIKIAGENHGAVMEIFELKGE GDMIEKKE 
Sbjct: 121 GKAMKKVIDSDCHGESSKTTMTSHKHEPNTIKIAGENHGAVMEIFELKGEGGDMIEKKET 180

Query: 181 FRRTLNRKAKDQNKEGCKDQNGESTYLNSNVQGVNNSILYGASLAHHDP 229
           FRRT NRKAKDQNKEGCK++ GESTYLNSNVQGVNNSILYGASLAHHDP
Sbjct: 181 FRRTSNRKAKDQNKEGCKEKKGESTYLNSNVQGVNNSILYGASLAHHDP 225

[Close]

BLAST of Csor.00g108430 vs. ExPASy TrEMBL
Match: A0A6J1IBA2 (uncharacterized protein LOC111473597 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111473597 PE=4 SV=1)

HSP 1 Score: 371 bits (952), Expect = 7.29e-128
Identity = 203/229 (88.65%), Postives = 210/229 (91.70%), Query Frame = 0


Query: 1   MAGRLRRSMFRLSSFKRPFIHGGSNSRQDSGQYDGRYPSTSKESSIEPRARSPSLSPKRE 60
           MAGRLRRSMFRLSS KRPFIHGGSNSRQDSG Y    PSTSKESS+EPRARSPSLSPKRE
Sbjct: 1   MAGRLRRSMFRLSSIKRPFIHGGSNSRQDSGPY----PSTSKESSMEPRARSPSLSPKRE 60

Query: 61  SVAASPTYSVKKVASPSPSPSYGGSSGGVMSSQPKAVDEDLKDKPTTQPRSLETEPKAVV 120
           SVAASP YSVKKVASPSPSPSYGGS+GGV++SQPKAVDE LKDKPTTQPRS ETEPKAVV
Sbjct: 61  SVAASPMYSVKKVASPSPSPSYGGSAGGVINSQPKAVDEYLKDKPTTQPRSPETEPKAVV 120

Query: 121 GKATKKVTDSDRRIESNNTTMTSHKHEPNTIKIAGENHGAVMEIFELKGEVGDMIEKKER 180
           GKA KKV DSD   ES+ TTMTSHKHEPNTIKIAGENHGAVMEIFELKGE GDMIEKKE 
Sbjct: 121 GKAMKKVIDSDCHGESSKTTMTSHKHEPNTIKIAGENHGAVMEIFELKGEGGDMIEKKET 180

Query: 181 FRRTLNRKAKDQNKEGCKDQNGESTYLNSNVQGVNNSILYGASLAHHDP 229
           FRRT NRKAKDQNKEGCK++ GESTYLNSNVQGVNNSILYGASLAHHDP
Sbjct: 181 FRRTSNRKAKDQNKEGCKEKKGESTYLNSNVQGVNNSILYGASLAHHDP 225

[Close]

BLAST of Csor.00g108430 vs. ExPASy TrEMBL
Match: A0A6J1ICG4 (uncharacterized protein LOC111473597 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473597 PE=4 SV=1)

HSP 1 Score: 371 bits (952), Expect = 7.81e-127
Identity = 203/229 (88.65%), Postives = 210/229 (91.70%), Query Frame = 0


Query: 1   MAGRLRRSMFRLSSFKRPFIHGGSNSRQDSGQYDGRYPSTSKESSIEPRARSPSLSPKRE 60
           MAGRLRRSMFRLSS KRPFIHGGSNSRQDSG Y    PSTSKESS+EPRARSPSLSPKRE
Sbjct: 1   MAGRLRRSMFRLSSIKRPFIHGGSNSRQDSGPY----PSTSKESSMEPRARSPSLSPKRE 60

Query: 61  SVAASPTYSVKKVASPSPSPSYGGSSGGVMSSQPKAVDEDLKDKPTTQPRSLETEPKAVV 120
           SVAASP YSVKKVASPSPSPSYGGS+GGV++SQPKAVDE LKDKPTTQPRS ETEPKAVV
Sbjct: 61  SVAASPMYSVKKVASPSPSPSYGGSAGGVINSQPKAVDEYLKDKPTTQPRSPETEPKAVV 120

Query: 121 GKATKKVTDSDRRIESNNTTMTSHKHEPNTIKIAGENHGAVMEIFELKGEVGDMIEKKER 180
           GKA KKV DSD   ES+ TTMTSHKHEPNTIKIAGENHGAVMEIFELKGE GDMIEKKE 
Sbjct: 121 GKAMKKVIDSDCHGESSKTTMTSHKHEPNTIKIAGENHGAVMEIFELKGEGGDMIEKKET 180

Query: 181 FRRTLNRKAKDQNKEGCKDQNGESTYLNSNVQGVNNSILYGASLAHHDP 229
           FRRT NRKAKDQNKEGCK++ GESTYLNSNVQGVNNSILYGASLAHHDP
Sbjct: 181 FRRTSNRKAKDQNKEGCKEKKGESTYLNSNVQGVNNSILYGASLAHHDP 225

[Close]

BLAST of Csor.00g108430 vs. TAIR 10
Match: AT1G63310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20362.1); Has 78 Blast hits to 77 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 6.6e-06
Identity = 27/55 (49.09%), Postives = 34/55 (61.82%), Query Frame = 0


Query: 188 KAKDQNKEGCKDQNGE------STYLNSNVQGVNNSILYGASLAHHDPGLHHALS 237
           K +  N  G +DQNG+      STY+NSN Q VNNSI+ GA    HDPG+H  +S
Sbjct: 65  KTELDNNHGDRDQNGDHELDFLSTYVNSNFQAVNNSIMIGAKYETHDPGVHLDIS 119

The following BLAST results are available for this feature:

BLAST of Csor.00g108430 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g108430 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597056.1	1.16e-160	100.00	hypothetical protein SDJN03_10236, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022945689.1	7.21e-155	97.07	uncharacterized protein LOC111449843 [Cucurbita moschata]	[more]
XP_023540123.1	1.03e-138	90.38	uncharacterized protein LOC111800588 [Cucurbita pepo subsp. pepo]	[more]
XP_022975569.1	6.98e-136	89.12	uncharacterized protein LOC111475114 isoform X3 [Cucurbita maxima]	[more]
XP_022975568.1	1.35e-127	88.65	uncharacterized protein LOC111475114 isoform X2 [Cucurbita maxima]	[more]

BLAST of Csor.00g108430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G1N7	3.49e-155	97.07	uncharacterized protein LOC111449843 OS=Cucurbita moschata OX=3662 GN=LOC1114498...	[more]
A0A6J1IKZ2	3.38e-136	89.12	uncharacterized protein LOC111475114 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IJL2	6.56e-128	88.65	uncharacterized protein LOC111475114 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IBA2	7.29e-128	88.65	uncharacterized protein LOC111473597 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1ICG4	7.81e-127	88.65	uncharacterized protein LOC111473597 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Csor.00g108430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G63310.1	6.6e-06	49.09	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 175..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..133
None	No IPR available	PANTHER	PTHR33472:SF1	EXTENSIN-RELATED	coord: 38..239
None	No IPR available	PANTHER	PTHR33472	OS01G0106600 PROTEIN	coord: 38..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g108430.m01	Csor.00g108430.m01	mRNA