Csor.00g107790 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g107790
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Homeobox protein knotted-1-like 1
Location	Csor_Chr06: 7149645 .. 7150638 (+)
RNA-Seq Expression	Csor.00g107790
Synteny	Csor.00g107790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTCTGGGAACCATTCTACAGACCAACCACTTCGTGTCCAACTCCAACTAAAACACGAGGAAGAAGACGATGGCGTGGACGGAGATACGCTGCGTAGGAGAATTTCTAGCCACCCCTTATATGGCCTCTTACTTGAGACCCATCTCAACTGTTTGAAGGTGAGTTTAGTTATTTGTATTCATGATAAAATTAGTAGTCATTTGTTATATGTTGTGTGTTCAGGTTGGAGGAATTGGTGAATTGGACCGAGGTTATTTAGCTATGGATTTGATGGAACACCGAGAAAATGAGATCAGATGCTTGAATACGCTTAACCAATCCGAGCTAGATCGCTTCATGGTATGGTATTAACTCCATATCACTCGGAATTCGAACTTTGTAATAAACATCATCACGTTTGAATCACTGGATGTCGAAAGATTAATAAACCGTTAAAAATAATTACATGTCACATACAAGTGCATTGTTGATACATGACTTAATCTTTCCACGATTTATTAGTCATCAAACATTTTTAGGGAAAGTTACCAATCGTAGAGCATTTCTAAGAGAAGAATTGTTAAGTCGTTTTTCCTAAATTTTATTTAAAAAGTCGAAAAGAATTGTGATTAAAGTATTTTTAGTATAAAGTGTCGAGGATCGTTGGAGAGGAGTCCGCTTATTTAGGGAATAATCATGAGTTTGTAAGTAAGAAATACATTTTTATTGGTACGAAACTTTTTTGGAGAAGCCCATAACGAAGCTATGAGAGCCTGTGCTCAAAGTGAACAAAAATAATATGTTGCGTTGAAACCGAAGGAGTTATGTGTGCAGGAAAGCTATTGCTATGCATTGAGCAAGCTGAAAGAAGCAATGGAGGAATCTCAGTTAAAATCGATGGCATTCATAAACAGCATGAACTCGCAACTAAGGGAGCTGACGGCGACGGGTGCGGCAGCCAAGAAACCCACCGCCGCCTCATCTTCTGCTGCTACTAGCGACACAAAGTGA

mRNA sequence

ATGGACTCTGGGAACCATTCTACAGACCAACCACTTCGTGTCCAACTCCAACTAAAACACGAGGAAGAAGACGATGGCGTGGACGGAGATACGCTGCGTAGGAGAATTTCTAGCCACCCCTTATATGGCCTCTTACTTGAGACCCATCTCAACTGTTTGAAGGTTGGAGGAATTGGTGAATTGGACCGAGGTTATTTAGCTATGGATTTGATGGAACACCGAGAAAATGAGATCAGATGCTTGAATACGCTTAACCAATCCGAGCTAGATCGCTTCATGGAAAGCTATTGCTATGCATTGAGCAAGCTGAAAGAAGCAATGGAGGAATCTCAGTTAAAATCGATGGCATTCATAAACAGCATGAACTCGCAACTAAGGGAGCTGACGGCGACGGGTGCGGCAGCCAAGAAACCCACCGCCGCCTCATCTTCTGCTGCTACTAGCGACACAAAGTGA

Coding sequence (CDS)

ATGGACTCTGGGAACCATTCTACAGACCAACCACTTCGTGTCCAACTCCAACTAAAACACGAGGAAGAAGACGATGGCGTGGACGGAGATACGCTGCGTAGGAGAATTTCTAGCCACCCCTTATATGGCCTCTTACTTGAGACCCATCTCAACTGTTTGAAGGTTGGAGGAATTGGTGAATTGGACCGAGGTTATTTAGCTATGGATTTGATGGAACACCGAGAAAATGAGATCAGATGCTTGAATACGCTTAACCAATCCGAGCTAGATCGCTTCATGGAAAGCTATTGCTATGCATTGAGCAAGCTGAAAGAAGCAATGGAGGAATCTCAGTTAAAATCGATGGCATTCATAAACAGCATGAACTCGCAACTAAGGGAGCTGACGGCGACGGGTGCGGCAGCCAAGAAACCCACCGCCGCCTCATCTTCTGCTGCTACTAGCGACACAAAGTGA

Protein sequence

MDSGNHSTDQPLRVQLQLKHEEEDDGVDGDTLRRRISSHPLYGLLLETHLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINSMNSQLRELTATGAAAKKPTAASSSAATSDTK

Homology

[Close]

BLAST of Csor.00g107790 vs. ExPASy Swiss-Prot
Match: Q84JS6 (Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana OX=3702 GN=KNAT6 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.3e-06
Identity = 34/109 (31.19%), Postives = 51/109 (46.79%), Query Frame = 0


Query: 24  DDGVDGDTLRRRISSHPLYGLLLETHLNCLKVGGIGE----LDRGYLAMDLMEHRENEIR 83
           DD V    ++ +I+ HP Y  LL+ +++C KVG   E    L+      D+ +       
Sbjct: 77  DDNVSLTVIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLEEIQRESDVYKQEVVPSS 136

Query: 84  CLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINSMNSQLREL 129
           C       ELD FME+YC  L K K  +     ++  F+N +  QLR L
Sbjct: 137 CFGA--DPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNL 183

[Close]

BLAST of Csor.00g107790 vs. ExPASy Swiss-Prot
Match: P46640 (Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana OX=3702 GN=KNAT2 PE=1 SV=3)

HSP 1 Score: 51.6 bits (122), Expect = 9.0e-06
Identity = 50/152 (32.89%), Postives = 74/152 (48.68%), Query Frame = 0


Query: 4   GNHSTDQPLRVQLQLKHEEEDDGVDGDTLRRRISSHPLYGLLLETHLNCLKVGGIGELDR 63
           G+      L  +L  +  + +D      ++ +I+SHPLY  LL+T+++C KVG   E   
Sbjct: 41  GSDELATALSSELLPRIRKAEDNFSLSVIKSKIASHPLYPRLLQTYIDCQKVGAPME--- 100

Query: 64  GYLAMDLME-HRENEI--RCLNTLN----QSELDRFMESYCYALSKLKEAMEESQLKSMA 123
             +A  L E  REN +  R +  L+      ELD FME+YC  L K K  +     ++  
Sbjct: 101 --IACILEEIQRENHVYKRDVAPLSCFGADPELDEFMETYCDILVKYKTDLARPFDEATT 160

Query: 124 FINSMNSQLRELTATGAAAKKPTAASSSAATS 149
           FIN +  QL+ L    A+A   TA S   A S
Sbjct: 161 FINKIEMQLQNLCTGPASA---TALSDDGAVS 184

[Close]

BLAST of Csor.00g107790 vs. ExPASy Swiss-Prot
Match: O65034 (Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. indica OX=39946 GN=OSH15 PE=2 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 1.2e-05
Identity = 32/107 (29.91%), Postives = 54/107 (50.47%), Query Frame = 0


Query: 23  EDDGVDGDTLRRRISSHPLYGLLLETHLNCLKVGGIGELDRGYLA----MDLMEHRENEI 82
           E    + ++++ +I +HP Y  LL  +L+C KVG   E+     A    +D      ++ 
Sbjct: 82  EISAAEAESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTATAAKLDARPPGRHDA 141

Query: 83  RCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINSMNSQL 126
           R        ELD+FME+YC  L+K +E +     ++M F+  + SQL
Sbjct: 142 R------DPELDQFMEAYCNMLAKYREELTRPIDEAMEFLKRVESQL 182

[Close]

BLAST of Csor.00g107790 vs. ExPASy Swiss-Prot
Match: O80416 (Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. japonica OX=39947 GN=OSH15 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.2e-05
Identity = 32/107 (29.91%), Postives = 54/107 (50.47%), Query Frame = 0


Query: 23  EDDGVDGDTLRRRISSHPLYGLLLETHLNCLKVGGIGELDRGYLA----MDLMEHRENEI 82
           E    + ++++ +I +HP Y  LL  +L+C KVG   E+     A    +D      ++ 
Sbjct: 82  EISAAEAESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTATAAKLDARPPGRHDA 141

Query: 83  RCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINSMNSQL 126
           R        ELD+FME+YC  L+K +E +     ++M F+  + SQL
Sbjct: 142 R------DPELDQFMEAYCNMLAKYREELTRPIDEAMEFLKRVESQL 182

[Close]

BLAST of Csor.00g107790 vs. ExPASy Swiss-Prot
Match: O22299 (Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum OX=4081 GN=LET6 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 3.4e-05
Identity = 29/112 (25.89%), Postives = 54/112 (48.21%), Query Frame = 0


Query: 22  EEDDGVDGDTLRRRISSHPLYGLLLETHLNCLKVGG----IGELDRGYLAMDLMEHRENE 81
           +ED+     +++ +I +HP Y  LL  +LNC K+G     +  L+        M    + 
Sbjct: 86  QEDNNSSSSSIKSKIMAHPHYHRLLTAYLNCQKIGAPPEVVARLEEICATSATMGRSSSS 145

Query: 82  IRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINSMNSQLRELT 130
                      LD+FME+YC  L+K ++ + +   ++M F++ +  Q + LT
Sbjct: 146 SGGGIIGEDPALDQFMEAYCEMLTKYEQELSKPFKEAMVFLSRIECQFKALT 197

[Close]

BLAST of Csor.00g107790 vs. NCBI nr
Match: KAG6596993.1 (Homeobox protein knotted-1-like 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 293 bits (750), Expect = 7.74e-100
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MDSGNHSTDQPLRVQLQLKHEEEDDGVDGDTLRRRISSHPLYGLLLETHLNCLKVGGIGE 60
           MDSGNHSTDQPLRVQLQLKHEEEDDGVDGDTLRRRISSHPLYGLLLETHLNCLKVGGIGE
Sbjct: 1   MDSGNHSTDQPLRVQLQLKHEEEDDGVDGDTLRRRISSHPLYGLLLETHLNCLKVGGIGE 60

Query: 61  LDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINS 120
           LDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINS
Sbjct: 61  LDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINS 120

Query: 121 MNSQLRELTATGAAAKKPTAASSSAATSDTK 151
           MNSQLRELTATGAAAKKPTAASSSAATSDTK
Sbjct: 121 MNSQLRELTATGAAAKKPTAASSSAATSDTK 151

[Close]

BLAST of Csor.00g107790 vs. NCBI nr
Match: XP_022945492.1 (homeobox protein KNOX3 [Cucurbita moschata])

HSP 1 Score: 291 bits (745), Expect = 4.48e-99
Identity = 150/151 (99.34%), Postives = 150/151 (99.34%), Query Frame = 0


Query: 1   MDSGNHSTDQPLRVQLQLKHEEEDDGVDGDTLRRRISSHPLYGLLLETHLNCLKVGGIGE 60
           MDSGNHSTDQPLRVQLQLKHEEEDDGVDGDTLRRRISSHPLYGLLLETHLNCLKVGGIGE
Sbjct: 1   MDSGNHSTDQPLRVQLQLKHEEEDDGVDGDTLRRRISSHPLYGLLLETHLNCLKVGGIGE 60

Query: 61  LDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINS 120
           LDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINS
Sbjct: 61  LDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINS 120

Query: 121 MNSQLRELTATGAAAKKPTAASSSAATSDTK 151
           MNSQLRELTATGAAAKKPTAASSSAATSD K
Sbjct: 121 MNSQLRELTATGAAAKKPTAASSSAATSDAK 151

[Close]

BLAST of Csor.00g107790 vs. NCBI nr
Match: KAG7028461.1 (Homeobox protein knotted-1-like 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 289 bits (740), Expect = 2.59e-98
Identity = 149/151 (98.68%), Postives = 150/151 (99.34%), Query Frame = 0


Query: 1   MDSGNHSTDQPLRVQLQLKHEEEDDGVDGDTLRRRISSHPLYGLLLETHLNCLKVGGIGE 60
           MDSGNHSTDQPLRVQLQLKHEEEDDGVDG+ LRRRISSHPLYGLLLETHLNCLKVGGIGE
Sbjct: 1   MDSGNHSTDQPLRVQLQLKHEEEDDGVDGEMLRRRISSHPLYGLLLETHLNCLKVGGIGE 60

Query: 61  LDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINS 120
           LDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINS
Sbjct: 61  LDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINS 120

Query: 121 MNSQLRELTATGAAAKKPTAASSSAATSDTK 151
           MNSQLRELTATGAAAKKPTAASSSAATSDTK
Sbjct: 121 MNSQLRELTATGAAAKKPTAASSSAATSDTK 151

[Close]

BLAST of Csor.00g107790 vs. NCBI nr
Match: XP_023539616.1 (homeobox protein KNOX3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 288 bits (738), Expect = 5.24e-98
Identity = 149/151 (98.68%), Postives = 149/151 (98.68%), Query Frame = 0


Query: 1   MDSGNHSTDQPLRVQLQLKHEEEDDGVDGDTLRRRISSHPLYGLLLETHLNCLKVGGIGE 60
           MDSGNHSTDQPLRVQLQLKHEEEDDGVDGD LR RISSHPLYGLLLETHLNCLKVGGIGE
Sbjct: 1   MDSGNHSTDQPLRVQLQLKHEEEDDGVDGDMLRTRISSHPLYGLLLETHLNCLKVGGIGE 60

Query: 61  LDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINS 120
           LDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINS
Sbjct: 61  LDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINS 120

Query: 121 MNSQLRELTATGAAAKKPTAASSSAATSDTK 151
           MNSQLRELTATGAAAKKPTAASSSAATSDTK
Sbjct: 121 MNSQLRELTATGAAAKKPTAASSSAATSDTK 151

[Close]

BLAST of Csor.00g107790 vs. NCBI nr
Match: XP_022974318.1 (homeobox protein KNOX3-like [Cucurbita maxima] >XP_022975290.1 homeobox protein KNOX3-like [Cucurbita maxima])

HSP 1 Score: 267 bits (683), Expect = 1.15e-89
Identity = 143/152 (94.08%), Postives = 145/152 (95.39%), Query Frame = 0


Query: 1   MDSGNHSTDQPLRVQLQLKHEEEDDGVDG-DTLRRRISSHPLYGLLLETHLNCLKVGGIG 60
           MDSGNHSTDQPL    QLK EEEDDGVDG + LRRRISSHPLYGLLL+THLNCLKVGGIG
Sbjct: 1   MDSGNHSTDQPL----QLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIG 60

Query: 61  ELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFIN 120
           ELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFIN
Sbjct: 61  ELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFIN 120

Query: 121 SMNSQLRELTATGAAAKKPTAASSSAATSDTK 151
           SMNSQLRELTATGAAAKKPTAASSSAATSDTK
Sbjct: 121 SMNSQLRELTATGAAAKKPTAASSSAATSDTK 148

[Close]

BLAST of Csor.00g107790 vs. ExPASy TrEMBL
Match: A0A6J1G133 (homeobox protein KNOX3 OS=Cucurbita moschata OX=3662 GN=LOC111449708 PE=4 SV=1)

HSP 1 Score: 291 bits (745), Expect = 2.17e-99
Identity = 150/151 (99.34%), Postives = 150/151 (99.34%), Query Frame = 0


Query: 1   MDSGNHSTDQPLRVQLQLKHEEEDDGVDGDTLRRRISSHPLYGLLLETHLNCLKVGGIGE 60
           MDSGNHSTDQPLRVQLQLKHEEEDDGVDGDTLRRRISSHPLYGLLLETHLNCLKVGGIGE
Sbjct: 1   MDSGNHSTDQPLRVQLQLKHEEEDDGVDGDTLRRRISSHPLYGLLLETHLNCLKVGGIGE 60

Query: 61  LDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINS 120
           LDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINS
Sbjct: 61  LDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINS 120

Query: 121 MNSQLRELTATGAAAKKPTAASSSAATSDTK 151
           MNSQLRELTATGAAAKKPTAASSSAATSD K
Sbjct: 121 MNSQLRELTATGAAAKKPTAASSSAATSDAK 151

[Close]

BLAST of Csor.00g107790 vs. ExPASy TrEMBL
Match: A0A6J1IFV6 (homeobox protein KNOX3-like OS=Cucurbita maxima OX=3661 GN=LOC111472956 PE=4 SV=1)

HSP 1 Score: 267 bits (683), Expect = 5.58e-90
Identity = 143/152 (94.08%), Postives = 145/152 (95.39%), Query Frame = 0


Query: 1   MDSGNHSTDQPLRVQLQLKHEEEDDGVDG-DTLRRRISSHPLYGLLLETHLNCLKVGGIG 60
           MDSGNHSTDQPL    QLK EEEDDGVDG + LRRRISSHPLYGLLL+THLNCLKVGGIG
Sbjct: 1   MDSGNHSTDQPL----QLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIG 60

Query: 61  ELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFIN 120
           ELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFIN
Sbjct: 61  ELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFIN 120

Query: 121 SMNSQLRELTATGAAAKKPTAASSSAATSDTK 151
           SMNSQLRELTATGAAAKKPTAASSSAATSDTK
Sbjct: 121 SMNSQLRELTATGAAAKKPTAASSSAATSDTK 148

[Close]

BLAST of Csor.00g107790 vs. ExPASy TrEMBL
Match: A0A6J1C8K6 (protein KNATM OS=Momordica charantia OX=3673 GN=LOC111008979 PE=4 SV=1)

HSP 1 Score: 198 bits (503), Expect = 1.35e-62
Identity = 98/127 (77.17%), Postives = 116/127 (91.34%), Query Frame = 0


Query: 18  LKHEEEDDGVDGDTLRRRISSHPLYGLLLETHLNCLKVGGIGELDRGYLAMDLMEHRENE 77
           L+ EEE +G +G+ LRRRISSHPLYGLL+ETHLNCLKVGGIG++DRGYLA D+++ ++N 
Sbjct: 16  LQDEEEKEGWEGEILRRRISSHPLYGLLVETHLNCLKVGGIGDMDRGYLATDVIKQQDNN 75

Query: 78  IRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINSMNSQLRELTATGAAAKK 137
           IRCLNTLNQSELDRFME+YC+ALSKLKEAMEESQ+KSMAFINSM+SQLRE+ AT AAA K
Sbjct: 76  IRCLNTLNQSELDRFMETYCFALSKLKEAMEESQIKSMAFINSMHSQLREIPATSAAAHK 135

Query: 138 PTAASSS 144
           PT +SSS
Sbjct: 136 PTTSSSS 142

[Close]

BLAST of Csor.00g107790 vs. ExPASy TrEMBL
Match: A0A444Z1E2 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B05g075536 PE=4 SV=1)

HSP 1 Score: 132 bits (332), Expect = 3.74e-36
Identity = 75/133 (56.39%), Postives = 96/133 (72.18%), Query Frame = 0


Query: 19  KHEEEDDGVDGDTLRRRISSHPLYGLLLETHLNCLKVGGIGELDRGYLAMDLMEHRENEI 78
           + E++DD  + + L+RRIS+HPLYGLL+E HL CLKVG I  LDR  L +D M+  + + 
Sbjct: 45  EEEDQDDEKNNEILKRRISNHPLYGLLVEAHLECLKVGDISNLDR-QLKIDPMQAMKQQN 104

Query: 79  RCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINSMNSQLRELTATGAAAKKP 138
             LN  +QSELD FME+YC AL KLKEAMEE Q KSMAFIN+M+SQLRELT    A   P
Sbjct: 105 --LNMFSQSELDIFMEAYCMALGKLKEAMEEPQQKSMAFINNMHSQLRELTTKATAMPPP 164

Query: 139 TAASSSAATSDTK 151
           + AS ++++SD K
Sbjct: 165 SEASGASSSSDCK 174

[Close]

BLAST of Csor.00g107790 vs. ExPASy TrEMBL
Match: A0A6P4DE57 (homeobox protein knotted-1-like 1 OS=Arachis duranensis OX=130453 GN=LOC107490543 PE=4 SV=1)

HSP 1 Score: 129 bits (324), Expect = 6.04e-35
Identity = 73/133 (54.89%), Postives = 96/133 (72.18%), Query Frame = 0


Query: 19  KHEEEDDGVDGDTLRRRISSHPLYGLLLETHLNCLKVGGIGELDRGYLAMDLMEHRENEI 78
           + E++DD  + + L+RRIS+HPLYGLL+E HL CLKVG I  LDR  L +D ++  + + 
Sbjct: 45  EEEDQDDEKNNEILKRRISNHPLYGLLVEAHLECLKVGDISNLDR-QLKIDPIQAMKQQN 104

Query: 79  RCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINSMNSQLRELTATGAAAKKP 138
             LN  +QSELD FME+YC AL KLK+AMEE Q KSMAFIN+M+SQLRELT    A   P
Sbjct: 105 --LNMFSQSELDIFMEAYCMALGKLKKAMEEPQQKSMAFINNMHSQLRELTTKATAMPPP 164

Query: 139 TAASSSAATSDTK 151
           + AS ++++SD K
Sbjct: 165 SEASGASSSSDCK 174

[Close]

BLAST of Csor.00g107790 vs. TAIR 10
Match: AT1G14760.2 (KNOX Arabidopsis thaliana meinox )

HSP 1 Score: 73.9 bits (180), Expect = 1.2e-13
Identity = 47/115 (40.87%), Postives = 71/115 (61.74%), Query Frame = 0


Query: 18  LKHEEEDDGVDGDTLRRRISSHPLYGLLLETHLNCLKVGGIGELDRGYL---AMDL-MEH 77
           LK E ++   + + L++RISSHPLYGLLL +HLNCLKV   G+ D   +   A DL +  
Sbjct: 22  LKEEAQE---EEEILKKRISSHPLYGLLLHSHLNCLKVCS-GDFDSPEIMNTADDLALSK 81

Query: 78  RENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINSMNSQLREL 129
                   +    SELD+FME+YC  L +LKEAME+   ++  F++++ +QL ++
Sbjct: 82  LSLHPDSSSEATSSELDQFMEAYCSTLRELKEAMEKPLTETHRFVDAVYTQLNDI 132

[Close]

BLAST of Csor.00g107790 vs. TAIR 10
Match: AT1G14760.3 (KNOX Arabidopsis thaliana meinox )

HSP 1 Score: 53.5 bits (127), Expect = 1.7e-07
Identity = 35/111 (31.53%), Postives = 54/111 (48.65%), Query Frame = 0


Query: 18  LKHEEEDDGVDGDTLRRRISSHPLYGLLLETHLNCLKVGGIGELDRGYLAMDLMEHRENE 77
           LK E ++   + + L++RISSHPLYGLLL +HLNCLK                       
Sbjct: 22  LKEEAQE---EEEILKKRISSHPLYGLLLHSHLNCLK----------------------- 81

Query: 78  IRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINSMNSQLREL 129
                           E+YC  L +LKEAME+   ++  F++++ +QL ++
Sbjct: 82  ----------------EAYCSTLRELKEAMEKPLTETHRFVDAVYTQLNDI 90

[Close]

BLAST of Csor.00g107790 vs. TAIR 10
Match: AT1G23380.1 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 52.4 bits (124), Expect = 3.7e-07
Identity = 34/109 (31.19%), Postives = 51/109 (46.79%), Query Frame = 0


Query: 24  DDGVDGDTLRRRISSHPLYGLLLETHLNCLKVGGIGE----LDRGYLAMDLMEHRENEIR 83
           DD V    ++ +I+ HP Y  LL+ +++C KVG   E    L+      D+ +       
Sbjct: 77  DDNVSLTVIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLEEIQRESDVYKQEVVPSS 136

Query: 84  CLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINSMNSQLREL 129
           C       ELD FME+YC  L K K  +     ++  F+N +  QLR L
Sbjct: 137 CFGA--DPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNL 183

[Close]

BLAST of Csor.00g107790 vs. TAIR 10
Match: AT1G70510.1 (KNOTTED-like from Arabidopsis thaliana 2 )

HSP 1 Score: 51.6 bits (122), Expect = 6.4e-07
Identity = 50/152 (32.89%), Postives = 74/152 (48.68%), Query Frame = 0


Query: 4   GNHSTDQPLRVQLQLKHEEEDDGVDGDTLRRRISSHPLYGLLLETHLNCLKVGGIGELDR 63
           G+      L  +L  +  + +D      ++ +I+SHPLY  LL+T+++C KVG   E   
Sbjct: 41  GSDELATALSSELLPRIRKAEDNFSLSVIKSKIASHPLYPRLLQTYIDCQKVGAPME--- 100

Query: 64  GYLAMDLME-HRENEI--RCLNTLN----QSELDRFMESYCYALSKLKEAMEESQLKSMA 123
             +A  L E  REN +  R +  L+      ELD FME+YC  L K K  +     ++  
Sbjct: 101 --IACILEEIQRENHVYKRDVAPLSCFGADPELDEFMETYCDILVKYKTDLARPFDEATT 160

Query: 124 FINSMNSQLRELTATGAAAKKPTAASSSAATS 149
           FIN +  QL+ L    A+A   TA S   A S
Sbjct: 161 FINKIEMQLQNLCTGPASA---TALSDDGAVS 184

[Close]

BLAST of Csor.00g107790 vs. TAIR 10
Match: AT4G08150.1 (KNOTTED-like from Arabidopsis thaliana )

HSP 1 Score: 48.1 bits (113), Expect = 7.1e-06
Identity = 41/139 (29.50%), Postives = 69/139 (49.64%), Query Frame = 0


Query: 17  QLKHEEEDDGVDGDTLRRRISSHPLYGLLLETHLNCLKVGGIGE-LDRGYLAMDLMEHRE 76
           +  +   D+  D + ++ +I +HP Y  LL+ +L+C K+G   + +DR   A    E R+
Sbjct: 119 EANNNNNDNVSDVEAMKAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQ 178

Query: 77  NEIRCLNTLNQS----ELDRFMESYCYALSKLKEAMEESQLKSMAFINSMNSQLRELTAT 136
              R   +++ S    ELD+FME+YC  L K +E +     ++M FI  + SQL  L  +
Sbjct: 179 Q--RSTPSVSASSRDPELDQFMEAYCDMLVKYREELTRPIQEAMEFIRRIESQLSMLCQS 238

Query: 137 GA-AAKKPTAASSSAATSD 150
                  P   S +  +SD
Sbjct: 239 PIHILNNPDGKSDNMGSSD 255

The following BLAST results are available for this feature:

BLAST of Csor.00g107790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84JS6	5.3e-06	31.19	Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana OX=3702 GN=KNAT6 PE=1 ...	[more]
P46640	9.0e-06	32.89	Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana OX=3702 GN=KNAT2 PE=1 ...	[more]
O65034	1.2e-05	29.91	Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. indica OX=39946 GN=OSH...	[more]
O80416	1.2e-05	29.91	Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. japonica OX=39947 GN=O...	[more]
O22299	3.4e-05	25.89	Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum OX=4081 GN=LET6 PE=...	[more]

BLAST of Csor.00g107790 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6596993.1	7.74e-100	100.00	Homeobox protein knotted-1-like 2, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022945492.1	4.48e-99	99.34	homeobox protein KNOX3 [Cucurbita moschata]	[more]
KAG7028461.1	2.59e-98	98.68	Homeobox protein knotted-1-like 2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023539616.1	5.24e-98	98.68	homeobox protein KNOX3 [Cucurbita pepo subsp. pepo]	[more]
XP_022974318.1	1.15e-89	94.08	homeobox protein KNOX3-like [Cucurbita maxima] >XP_022975290.1 homeobox protein ...	[more]

BLAST of Csor.00g107790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G133	2.17e-99	99.34	homeobox protein KNOX3 OS=Cucurbita moschata OX=3662 GN=LOC111449708 PE=4 SV=1	[more]
A0A6J1IFV6	5.58e-90	94.08	homeobox protein KNOX3-like OS=Cucurbita maxima OX=3661 GN=LOC111472956 PE=4 SV=...	[more]
A0A6J1C8K6	1.35e-62	77.17	protein KNATM OS=Momordica charantia OX=3673 GN=LOC111008979 PE=4 SV=1	[more]
A0A444Z1E2	3.74e-36	56.39	Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B05g075536 PE=4 SV=1	[more]
A0A6P4DE57	6.04e-35	54.89	homeobox protein knotted-1-like 1 OS=Arachis duranensis OX=130453 GN=LOC10749054...	[more]

BLAST of Csor.00g107790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14760.2	1.2e-13	40.87	KNOX Arabidopsis thaliana meinox	[more]
AT1G14760.3	1.7e-07	31.53	KNOX Arabidopsis thaliana meinox	[more]
AT1G23380.1	3.7e-07	31.19	KNOTTED1-like homeobox gene 6	[more]
AT1G70510.1	6.4e-07	32.89	KNOTTED-like from Arabidopsis thaliana 2	[more]
AT4G08150.1	7.1e-06	29.50	KNOTTED-like from Arabidopsis thaliana	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005541	KNOX2	SMART	SM01256	KNOX2_2	coord: 79..130 e-value: 6.0E-8 score: 42.4
IPR005541	KNOX2	PFAM	PF03791	KNOX2	coord: 86..129 e-value: 1.4E-7 score: 30.9
IPR005540	KNOX1	SMART	SM01255	KNOX1_2	coord: 30..75 e-value: 5.6E-7 score: 39.2
IPR005540	KNOX1	PFAM	PF03790	KNOX1	coord: 32..56 e-value: 1.4E-7 score: 31.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..151
None	No IPR available	PANTHER	PTHR11850:SF290	FUSED COMPOUND LEAF 1	coord: 29..126
None	No IPR available	PANTHER	PTHR11850	HOMEOBOX PROTEIN TRANSCRIPTION FACTORS	coord: 29..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g107790.m01	Csor.00g107790.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding