Csor.00g106710 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g106710
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Lysine-specific demethylase JMJ16
Location	Csor_Chr18: 4895457 .. 4897208 (+)
RNA-Seq Expression	Csor.00g106710
Synteny	Csor.00g106710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGTGGTCGACTTGCTAAAACATAGTGAAAACATCACGAAGAAGAGGAGAAGGTTAGAGTATGAATGCGGTAATAGATGTTTGAAGGATTCGGATGAAAGTTGTGGTAGTGATCAGAAGGGCCCATACTCAGAACTTGGTCAAGAGTTCAACTCTCAAAGCGTTCAAAAAGCTATGCAGATGACTTTAAATCCCAATATTTCAGCAGTGGAAATGAGGTCACAAGTACAGCAGAGACAAAGTCATCCATGCTTCAAGAGCAGTGGGAACCATTGGTGGATCAAATAGAGGGTGAATATAGACACATTGTCGAGAATCCAAACTGAACAAATTTGAGGTAGGAGATTATAGATTTTGATTCCAACTTTCTTCTGTCAGATAAGCTTCACTTTGTGATCCTTCTGTATGATTGGTTTTAGGTGCTATATGGTGATAGTTTGGGTAGCCCTTCACTTGGCAGTGGATTTCCATCATCACCATCCAGTCCTATTGAACCAGGTCATGTTGATCACATGGACTCTGGATGGAACTTAAATAATTTACCTAGACTACCCGGTTCACTTCTTTCTTTTGATAGCTTCAAGACATGTTCTATTTTATCGCCTCGAGTTCACGTGGGAATGTGCTTTTCTACAGCTTGTTGGGTAAGGGTACCAGAAAAAACAAAATTCTGTTTATTAAGGGTAGAGGTTACGCTTGATTACTTTTTAGACGAACAAACTTTTTATGTTTTTAGTTTTATGTGAAGAGAAGGAACTCCATTTTTCAGTTTCTTTTCTTGAAGAGATTTCCTAATCTATTTACTGTTTGCTCATTCTGTTTTTCAATTATCACTTGGTTTTGTTTGCTGTTGGGGGTAGAAAAAAAGAAATGACTTCTTATGGGACATATTGATCATCATGCCAACTGGAAGTATTTTTATGTTACTGTCTTGTACTTATTAATATAGTTGTTACATTTTTGAGGAGTAATATATGTTGTTGCACTTTTTTTTCCCTATTTTAAAAACAGCGATTTGAAGAACACCACTTACCTTTGTTATGTTACTTGCACTTGGGAGCTCCTAAAATATGGTATGGCATTCCAGGAAGATACATTGATAAAGTTTGAGGTAGCCATGAAGAGTCCTTCCAGAAACTTTCGTGTGTGGAACAGAGAAGATCCCATAGAGGAATGGTAAGTAATGACATTCTCAAGTTCATCATTCAAGAAGACGTTGTATTGGATTTATGTTTAGCTGTTTTTTTTTTTTTTTTTTTTTGACATACCATTAAGTTCTTTAGTCATCGGTATTTGCAAATGTTGTATTGCTCATAATTTCATTGTCATATTTCATGGTATATCTAATAGTACCATAACAAGTTTTGTATTCAAATGTTTTTGATTCACTAAGCAGACAAGGAGACTGTATTTTAAAGCATGATTTGTTTCACGTTACACATTCCCATTGATATTACAGTCAGTCAACCAATCAATTGCCACATTGAAGAGTGAGAAGGCATACCAATTTATCGTTGCATTCAAAAATCCAAGAGAGTTTGTTCTGTCCTTCCAGGAACATGTCATTCGGGATTTAACTGTGGCTTTAGTGTTACTGAGGGGGAAGCGAATTTCGCCCCTCTCGACTGGTTTGCTTACGGTTATAATGCTATGGAGCTCTTACTCTGTAGAGAGAAGAAAGACACTTGTATCACTTTGATAGGCTATTGCTTGGAGCAGTCATTGAAAACTGTGAAGGCGCAAGGGTGA

mRNA sequence

ATGCTTGTGGTCGACTTGCTAAAACATAGTGAAAACATCACGAAGAAGAGGAGAAGGTTAGAGTATGAATGCGGTAATAGATGTTTGAAGGATTCGGATGAAAGTTGTGGTAGTGATCAGAAGGGCCCATACTCAGAACTTGGTCAAGAGTTCAACTCTCAAAGCGTTCAAAAAGCTATGCAGATGACTTTAAATCCCAATATTTCAGCAGTGGAAATGAGGTCACAAGTGCTATATGGTGATAGTTTGGGTAGCCCTTCACTTGGCAGTGGATTTCCATCATCACCATCCAGTCCTATTGAACCAGGTCATGTTGATCACATGGACTCTGGATGGAACTTAAATAATTTACCTAGACTACCCGGTTCACTTCTTTCTTTTGATAGCTTCAAGACATGTTCTATTTTATCGCCTCGAGTTCACGTGGGAATGTGCTTTTCTACAGCTTGTTGGGAAGATACATTGATAAAGTTTGAGGTAGCCATGAAGAGTCCTTCCAGAAACTTTCGTGTGTGGAACAGAGAAGATCCCATAGAGGAATGTGTTACTGAGGGGGAAGCGAATTTCGCCCCTCTCGACTGGTTTGCTTACGGTTATAATGCTATGGAGCTCTTACTCTGTAGAGAGAAGAAAGACACTTGTATCACTTTGATAGGCTATTGCTTGGAGCAGTCATTGAAAACTGTGAAGGCGCAAGGGTGA

Coding sequence (CDS)

ATGCTTGTGGTCGACTTGCTAAAACATAGTGAAAACATCACGAAGAAGAGGAGAAGGTTAGAGTATGAATGCGGTAATAGATGTTTGAAGGATTCGGATGAAAGTTGTGGTAGTGATCAGAAGGGCCCATACTCAGAACTTGGTCAAGAGTTCAACTCTCAAAGCGTTCAAAAAGCTATGCAGATGACTTTAAATCCCAATATTTCAGCAGTGGAAATGAGGTCACAAGTGCTATATGGTGATAGTTTGGGTAGCCCTTCACTTGGCAGTGGATTTCCATCATCACCATCCAGTCCTATTGAACCAGGTCATGTTGATCACATGGACTCTGGATGGAACTTAAATAATTTACCTAGACTACCCGGTTCACTTCTTTCTTTTGATAGCTTCAAGACATGTTCTATTTTATCGCCTCGAGTTCACGTGGGAATGTGCTTTTCTACAGCTTGTTGGGAAGATACATTGATAAAGTTTGAGGTAGCCATGAAGAGTCCTTCCAGAAACTTTCGTGTGTGGAACAGAGAAGATCCCATAGAGGAATGTGTTACTGAGGGGGAAGCGAATTTCGCCCCTCTCGACTGGTTTGCTTACGGTTATAATGCTATGGAGCTCTTACTCTGTAGAGAGAAGAAAGACACTTGTATCACTTTGATAGGCTATTGCTTGGAGCAGTCATTGAAAACTGTGAAGGCGCAAGGGTGA

Protein sequence

MLVVDLLKHSENITKKRRRLEYECGNRCLKDSDESCGSDQKGPYSELGQEFNSQSVQKAMQMTLNPNISAVEMRSQVLYGDSLGSPSLGSGFPSSPSSPIEPGHVDHMDSGWNLNNLPRLPGSLLSFDSFKTCSILSPRVHVGMCFSTACWEDTLIKFEVAMKSPSRNFRVWNREDPIEECVTEGEANFAPLDWFAYGYNAMELLLCREKKDTCITLIGYCLEQSLKTVKAQG

Homology

[Close]

BLAST of Csor.00g106710 vs. ExPASy Swiss-Prot
Match: Q53WJ1 (Lysine-specific demethylase JMJ703 OS=Oryza sativa subsp. japonica OX=39947 GN=JMJ703 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.1e-13
Identity = 42/119 (35.29%), Postives = 60/119 (50.42%), Query Frame = 0


Query: 44  YSELGQEFNSQSVQKAMQMTLNPNISAVE-----------MRSQVLYGDSLGSPSLGSGF 103
           + +   +F+ Q  +K   M   P++  +E              +V+YG  L + + GSGF
Sbjct: 275 FQKYADDFSKQYFRKDTSMDSVPSVEDIEGEYWRIVEVPTEEIEVIYGADLETGTFGSGF 334

Query: 104 PSSPSSPIEPGHVDHMDSGWNLNNLPRLPGSLLSFDSFKTCSILSPRVHVGMCFSTACW 152
           P             +  SGWNLNNLPRL GS+LSF+      +L P V+VGMCFS+ CW
Sbjct: 335 PKLSPETKSDAEDKYAQSGWNLNNLPRLQGSVLSFEGGDISGVLVPWVYVGMCFSSFCW 393

[Close]

BLAST of Csor.00g106710 vs. ExPASy Swiss-Prot
Match: O64752 (Lysine-specific demethylase JMJ15 OS=Arabidopsis thaliana OX=3702 GN=JMJ15 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.9e-13
Identity = 49/131 (37.40%), Postives = 65/131 (49.62%), Query Frame = 0


Query: 22  YECGNRCLKDSDESCGSDQKGPYSELGQEFNSQSVQKAMQMTLNPNISAVEMRSQVLYGD 81
           +E G     +  E    D K  Y E        SV++ ++      I       +VLYG 
Sbjct: 177 FESGPEFTLEKFEKYAQDFKDSYFERKDNVGDPSVEE-IEGEYWRIIEKETNEVKVLYGT 236

Query: 82  SLGSPSLGSGFPSSPSSPIEPGHVD-HMDSGWNLNNLPRLPGSLLSFDSFKTCSILSPRV 141
            L +P LGSGF      P     +D ++ SGWNLNNL RL GSLLSF+  +   +  P +
Sbjct: 237 DLENPILGSGFSKGVKIPTRRNDMDKYISSGWNLNNLARLQGSLLSFEDCEISGVQVPWL 296

Query: 142 HVGMCFSTACW 152
           +VGMCFST CW
Sbjct: 297 YVGMCFSTFCW 306

[Close]

BLAST of Csor.00g106710 vs. ExPASy Swiss-Prot
Match: C0SUT9 (Putative lysine-specific demethylase JMJ16 OS=Arabidopsis thaliana OX=3702 GN=JMJ16 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.5e-12
Identity = 37/77 (48.05%), Postives = 47/77 (61.04%), Query Frame = 0


Query: 76  QVLYGDSLGSPSLGSGFPSSPSSPIEPGHVD-HMDSGWNLNNLPRLPGSLLSFDSFKTCS 135
           +VLYG  L +   GSGFP   SS       D +  SGWNLNN PRLPGSLL ++      
Sbjct: 330 EVLYGADLETGVFGSGFPKISSSHNASSSEDKYAKSGWNLNNFPRLPGSLLKYEGSDISG 389

Query: 136 ILSPRVHVGMCFSTACW 152
           +L P +++GMCFS+ CW
Sbjct: 390 VLVPWLYIGMCFSSFCW 406

[Close]

BLAST of Csor.00g106710 vs. ExPASy Swiss-Prot
Match: Q8GUI6 (Probable lysine-specific demethylase JMJ14 OS=Arabidopsis thaliana OX=3702 GN=JMJ14 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.8e-12
Identity = 62/192 (32.29%), Postives = 84/192 (43.75%), Query Frame = 0


Query: 4   VDLLKHSENITK-------KRRRLEYECGNRCLKDSD----ESCGSDQKGPYS-ELGQEF 63
           +DLL++ E I K       KRRR+      R  +DS      S  SD +G +  + G +F
Sbjct: 118 IDLLQNREPIKKSTKTKKRKRRRISKIGYTRRKRDSGCDTASSGSSDSEGKFGFQTGPDF 177

Query: 64  NSQSVQK--------AMQMTLNPNISAVEMRS-----------------------QVLYG 123
             +  QK          Q   +P   A E +                        +V YG
Sbjct: 178 TLEEFQKYDEYFKECYFQSEDHPGSKASENKKFKPKVKDLEGEYWRIVEQATDEVEVYYG 237

Query: 124 DSLGSPSLGSGFPS-SPSSPIEPGHVDHMDSGWNLNNLPRLPGSLLSFDSFKTCSILSPR 152
             L +   GSGFP   P  PI      +   GWNLNNL RLPGS+L+F+S     ++ P 
Sbjct: 238 ADLETKKFGSGFPKYKPGYPISEAD-QYSQCGWNLNNLSRLPGSVLAFESCDISGVIVPW 297

[Close]

BLAST of Csor.00g106710 vs. ExPASy Swiss-Prot
Match: F4I6G4 (Lysine-specific demethylase JMJ18 OS=Arabidopsis thaliana OX=3702 GN=JMJ18 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.7e-11
Identity = 36/76 (47.37%), Postives = 45/76 (59.21%), Query Frame = 0


Query: 76  QVLYGDSLGSPSLGSGFPSSPSSPIEPGHVDHMDSGWNLNNLPRLPGSLLSFDSFKTCSI 135
           +V YG  L +  LGSGF              +  SGWNLNNLPRLPGS+LSF+      +
Sbjct: 231 EVYYGADLENGVLGSGFYKRAEKFTGSDMEQYTLSGWNLNNLPRLPGSVLSFEDCDISGV 290

Query: 136 LSPRVHVGMCFSTACW 152
           L P ++VGMCFS+ CW
Sbjct: 291 LVPWLYVGMCFSSFCW 306

[Close]

BLAST of Csor.00g106710 vs. NCBI nr
Match: KAG6573501.1 (Lysine-specific demethylase JMJ15, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 483 bits (1242), Expect = 3.82e-172
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0


Query: 1   MLVVDLLKHSENITKKRRRLEYECGNRCLKDSDESCGSDQKGPYSELGQEFNSQSVQKAM 60
           MLVVDLLKHSENITKKRRRLEYECGNRCLKDSDESCGSDQKGPYSELGQEFNSQSVQKAM
Sbjct: 1   MLVVDLLKHSENITKKRRRLEYECGNRCLKDSDESCGSDQKGPYSELGQEFNSQSVQKAM 60

Query: 61  QMTLNPNISAVEMRSQVLYGDSLGSPSLGSGFPSSPSSPIEPGHVDHMDSGWNLNNLPRL 120
           QMTLNPNISAVEMRSQVLYGDSLGSPSLGSGFPSSPSSPIEPGHVDHMDSGWNLNNLPRL
Sbjct: 61  QMTLNPNISAVEMRSQVLYGDSLGSPSLGSGFPSSPSSPIEPGHVDHMDSGWNLNNLPRL 120

Query: 121 PGSLLSFDSFKTCSILSPRVHVGMCFSTACWEDTLIKFEVAMKSPSRNFRVWNREDPIEE 180
           PGSLLSFDSFKTCSILSPRVHVGMCFSTACWEDTLIKFEVAMKSPSRNFRVWNREDPIEE
Sbjct: 121 PGSLLSFDSFKTCSILSPRVHVGMCFSTACWEDTLIKFEVAMKSPSRNFRVWNREDPIEE 180

Query: 181 CVTEGEANFAPLDWFAYGYNAMELLLCREKKDTCITLIGYCLEQSLKTVKAQG 233
           CVTEGEANFAPLDWFAYGYNAMELLLCREKKDTCITLIGYCLEQSLKTVKAQG
Sbjct: 181 CVTEGEANFAPLDWFAYGYNAMELLLCREKKDTCITLIGYCLEQSLKTVKAQG 233

[Close]

BLAST of Csor.00g106710 vs. NCBI nr
Match: XP_023004812.1 (putative lysine-specific demethylase JMJ16 [Cucurbita maxima] >XP_023004814.1 putative lysine-specific demethylase JMJ16 [Cucurbita maxima])

HSP 1 Score: 263 bits (672), Expect = 6.45e-79
Identity = 163/328 (49.70%), Postives = 179/328 (54.57%), Query Frame = 0


Query: 6   LLKHSENITKKRRRLEYECGNRCLKDSDESCGSDQKGPYSELGQEF-------------- 65
           L KHSENITKKRRRLEYECGNRCLKDSDESCGSD+KGPYSELGQEF              
Sbjct: 207 LAKHSENITKKRRRLEYECGNRCLKDSDESCGSDKKGPYSELGQEFTLKAFKSYADDFKS 266

Query: 66  ----------NSQSVQKAMQMTLNPNISAVE-----------MRSQVLYGDSLGSPSLGS 125
                     N+++    +Q    P +  +E            + +VLYGDSLGSPSLGS
Sbjct: 267 QYFSSGNKVTNTETKSSMLQEQWEPLVDQIEGEYRHIVENPTEQIEVLYGDSLGSPSLGS 326

Query: 126 GFPSSPSSPIEPGHVDHMDSGWNLNNLPRLPGSLLSFDSFKTCSILSPRVHVGMCFSTAC 185
           GFPSSPSSPIEPGHVDHMDSGWNLNNLPRLPGSLLSFDSFKTCSILS RVHVGMCFSTAC
Sbjct: 327 GFPSSPSSPIEPGHVDHMDSGWNLNNLPRLPGSLLSFDSFKTCSILSSRVHVGMCFSTAC 386

Query: 186 WEDT-------------------------LIKFEVAMKSPSRNFRVWNRED--------- 232
           W                            + KFEVAMKS    F    R           
Sbjct: 387 WRVEEHHLPLLCYLHLGAPKIWYGIPGRYIDKFEVAMKSLPETFVEQKRSHRGMVSQPSI 446

[Close]

BLAST of Csor.00g106710 vs. NCBI nr
Match: XP_022960375.1 (putative lysine-specific demethylase JMJ16 [Cucurbita moschata] >XP_022960376.1 putative lysine-specific demethylase JMJ16 [Cucurbita moschata] >XP_022960377.1 putative lysine-specific demethylase JMJ16 [Cucurbita moschata])

HSP 1 Score: 261 bits (668), Expect = 2.76e-78
Identity = 161/328 (49.09%), Postives = 180/328 (54.88%), Query Frame = 0


Query: 6   LLKHSENITKKRRRLEYECGNRCLKDSDESCGSDQKGPYSELGQEFNSQSVQ------KA 65
           L KHS+NIT KRRRLEYECGNRCLKDSDESCGSD+KGPYSELGQEF  ++ +      K+
Sbjct: 207 LAKHSKNITNKRRRLEYECGNRCLKDSDESCGSDKKGPYSELGQEFTLKAFKSYADDFKS 266

Query: 66  MQMTLNPNISAVEMRS-----------------------------QVLYGDSLGSPSLGS 125
              +    +++ E +S                             +VLYGDSLGSPSLGS
Sbjct: 267 QYFSSGNKVTSTETKSSMLQEQWEPLVDQIEGEYRHIVENPTEQIEVLYGDSLGSPSLGS 326

Query: 126 GFPSSPSSPIEPGHVDHMDSGWNLNNLPRLPGSLLSFDSFKTCSILSPRVHVGMCFSTAC 185
           GFPSSPSSPIEPGHVDHMDSGWNLNNLPRLPGSLLSFDSFKTCSILSPRVHVGMCFSTAC
Sbjct: 327 GFPSSPSSPIEPGHVDHMDSGWNLNNLPRLPGSLLSFDSFKTCSILSPRVHVGMCFSTAC 386

Query: 186 WEDT-------------------------LIKFEVAMKSPSRNFRVWNRED--------- 232
           W                            + KFEVAMKS    F    R           
Sbjct: 387 WRVEEHHLPLLCYLHLGAPKIWYGIPGRYIDKFEVAMKSLPETFVEQKRSHRGMVSQPSI 446

[Close]

BLAST of Csor.00g106710 vs. NCBI nr
Match: XP_023515071.1 (putative lysine-specific demethylase JMJ16 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261 bits (667), Expect = 3.85e-78
Identity = 161/328 (49.09%), Postives = 180/328 (54.88%), Query Frame = 0


Query: 6   LLKHSENITKKRRRLEYECGNRCLKDSDESCGSDQKGPYSELGQEFNSQSVQ------KA 65
           L KHS+NIT KRRRLEYECGNRCLKDSDESCGSD+KGPYSELGQEF  ++ +      K+
Sbjct: 207 LAKHSKNITNKRRRLEYECGNRCLKDSDESCGSDKKGPYSELGQEFTLKAFKSYADDFKS 266

Query: 66  MQMTLNPNISAVEMRS-----------------------------QVLYGDSLGSPSLGS 125
              +    +++ E +S                             +VLYGDSLGSPSLGS
Sbjct: 267 QYFSSGNKVTSTETKSSMLQEQWEPLVDQIEGEYRHIVENPTEQIEVLYGDSLGSPSLGS 326

Query: 126 GFPSSPSSPIEPGHVDHMDSGWNLNNLPRLPGSLLSFDSFKTCSILSPRVHVGMCFSTAC 185
           GFPSSPSSPIEPGHVDHMDSGWNLNNLPRLPGSLLSFDSFKTCSILSPRVHVGMCFSTAC
Sbjct: 327 GFPSSPSSPIEPGHVDHMDSGWNLNNLPRLPGSLLSFDSFKTCSILSPRVHVGMCFSTAC 386

Query: 186 WEDT-------------------------LIKFEVAMKSPSRNFRVWNRED--------- 232
           W                            + KFEVAMKS    F    R           
Sbjct: 387 WRVEEHHLPLLCYLHLGAPKIWYGIPGRYIDKFEVAMKSLPETFVEQKRSHRGMVSQPSI 446

[Close]

BLAST of Csor.00g106710 vs. NCBI nr
Match: KAG6593057.1 (Lysine-specific demethylase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 261 bits (667), Expect = 1.02e-77
Identity = 159/316 (50.32%), Postives = 173/316 (54.75%), Query Frame = 0


Query: 6   LLKHSENITKKRRRLEYECGNRCLKDSDESCGSDQKGPYSELGQEFNSQSVQ------KA 65
           L KHSENITKKRRRLEYECGNRCLKDSDESCGSDQKGPYSELGQEF  ++ +      K+
Sbjct: 307 LAKHSENITKKRRRLEYECGNRCLKDSDESCGSDQKGPYSELGQEFTLKAFKSYADDFKS 366

Query: 66  MQMTLNPNISAVEMRS-----------------------------QVLYGDSLGSPSLGS 125
              +    +++ E +S                             +VLYGDSLGSPSLGS
Sbjct: 367 QYFSSGNEVTSTETKSSMLQEQWEPLVDQIEGEYRHIVENPTEQIEVLYGDSLGSPSLGS 426

Query: 126 GFPSSPSSPIEPGHVDHMDSGWNLNNLPRLPGSLLSFDSFKTCSILSPRVHVGMCFSTAC 185
           GFPSSPSSPIEPGHVDHMDSGWNLNNLPRLPGSLLSFDSFKTCSILSPRVHVGMCFSTAC
Sbjct: 427 GFPSSPSSPIEPGHVDHMDSGWNLNNLPRLPGSLLSFDSFKTCSILSPRVHVGMCFSTAC 486

Query: 186 WEDT-------------------------LIKFEVAMKSPSRNFRVWNRED--------- 220
           W                            + KFEVAMKS    F    R           
Sbjct: 487 WRVEEHHLPLLCYLHLGAPKIWYGIPGRYIDKFEVAMKSLPETFVEQRRSHRGMVSQPSI 546

[Close]

BLAST of Csor.00g106710 vs. ExPASy TrEMBL
Match: A0A6J1KXD9 (putative lysine-specific demethylase JMJ16 OS=Cucurbita maxima OX=3661 GN=LOC111498001 PE=4 SV=1)

HSP 1 Score: 263 bits (672), Expect = 3.12e-79
Identity = 163/328 (49.70%), Postives = 179/328 (54.57%), Query Frame = 0


Query: 6   LLKHSENITKKRRRLEYECGNRCLKDSDESCGSDQKGPYSELGQEF-------------- 65
           L KHSENITKKRRRLEYECGNRCLKDSDESCGSD+KGPYSELGQEF              
Sbjct: 207 LAKHSENITKKRRRLEYECGNRCLKDSDESCGSDKKGPYSELGQEFTLKAFKSYADDFKS 266

Query: 66  ----------NSQSVQKAMQMTLNPNISAVE-----------MRSQVLYGDSLGSPSLGS 125
                     N+++    +Q    P +  +E            + +VLYGDSLGSPSLGS
Sbjct: 267 QYFSSGNKVTNTETKSSMLQEQWEPLVDQIEGEYRHIVENPTEQIEVLYGDSLGSPSLGS 326

Query: 126 GFPSSPSSPIEPGHVDHMDSGWNLNNLPRLPGSLLSFDSFKTCSILSPRVHVGMCFSTAC 185
           GFPSSPSSPIEPGHVDHMDSGWNLNNLPRLPGSLLSFDSFKTCSILS RVHVGMCFSTAC
Sbjct: 327 GFPSSPSSPIEPGHVDHMDSGWNLNNLPRLPGSLLSFDSFKTCSILSSRVHVGMCFSTAC 386

Query: 186 WEDT-------------------------LIKFEVAMKSPSRNFRVWNRED--------- 232
           W                            + KFEVAMKS    F    R           
Sbjct: 387 WRVEEHHLPLLCYLHLGAPKIWYGIPGRYIDKFEVAMKSLPETFVEQKRSHRGMVSQPSI 446

[Close]

BLAST of Csor.00g106710 vs. ExPASy TrEMBL
Match: A0A6J1H785 (putative lysine-specific demethylase JMJ16 OS=Cucurbita moschata OX=3662 GN=LOC111461120 PE=4 SV=1)

HSP 1 Score: 261 bits (668), Expect = 1.34e-78
Identity = 161/328 (49.09%), Postives = 180/328 (54.88%), Query Frame = 0


Query: 6   LLKHSENITKKRRRLEYECGNRCLKDSDESCGSDQKGPYSELGQEFNSQSVQ------KA 65
           L KHS+NIT KRRRLEYECGNRCLKDSDESCGSD+KGPYSELGQEF  ++ +      K+
Sbjct: 207 LAKHSKNITNKRRRLEYECGNRCLKDSDESCGSDKKGPYSELGQEFTLKAFKSYADDFKS 266

Query: 66  MQMTLNPNISAVEMRS-----------------------------QVLYGDSLGSPSLGS 125
              +    +++ E +S                             +VLYGDSLGSPSLGS
Sbjct: 267 QYFSSGNKVTSTETKSSMLQEQWEPLVDQIEGEYRHIVENPTEQIEVLYGDSLGSPSLGS 326

Query: 126 GFPSSPSSPIEPGHVDHMDSGWNLNNLPRLPGSLLSFDSFKTCSILSPRVHVGMCFSTAC 185
           GFPSSPSSPIEPGHVDHMDSGWNLNNLPRLPGSLLSFDSFKTCSILSPRVHVGMCFSTAC
Sbjct: 327 GFPSSPSSPIEPGHVDHMDSGWNLNNLPRLPGSLLSFDSFKTCSILSPRVHVGMCFSTAC 386

Query: 186 WEDT-------------------------LIKFEVAMKSPSRNFRVWNRED--------- 232
           W                            + KFEVAMKS    F    R           
Sbjct: 387 WRVEEHHLPLLCYLHLGAPKIWYGIPGRYIDKFEVAMKSLPETFVEQKRSHRGMVSQPSI 446

[Close]

BLAST of Csor.00g106710 vs. ExPASy TrEMBL
Match: A0A6J1DQR3 (putative lysine-specific demethylase JMJ16 OS=Momordica charantia OX=3673 GN=LOC111023467 PE=4 SV=1)

HSP 1 Score: 194 bits (493), Expect = 1.47e-53
Identity = 129/326 (39.57%), Postives = 162/326 (49.69%), Query Frame = 0


Query: 8   KHSENITKKRRRLEYECGNRCLKDSDESCGSDQKGPYSELGQEF---------------- 67
           KH++N+  KRRR+EYECGNRC  D DESCG D+KGP S+LG+EF                
Sbjct: 209 KHNDNVKNKRRRIEYECGNRCFMDPDESCGIDKKGPNSKLGREFTLKAFKSYADDFKSQY 268

Query: 68  --------NSQSVQKAMQMTLNPNISAVEM-----------RSQVLYGDSLGSPSLGSGF 127
                   ++++    +Q    P +  VE            + +VL G SL SPSLGSGF
Sbjct: 269 FSSGNKVTDTETNSSTVQEQWEPLVDQVESEYRRIVENPTEQIEVLCGHSLDSPSLGSGF 328

Query: 128 PSSPSSPIEPGHVDHMDSGWNLNNLPRLPGSLLSFDSFKTCSILSPRVHVGMCFSTACWE 187
           P+S S  IEPGH DHM+SGWNLNNL RLPGSLLSFDSFKTCSIL P+V+VGMCFS+ CW 
Sbjct: 329 PASSSPLIEPGHADHMESGWNLNNLRRLPGSLLSFDSFKTCSILLPQVYVGMCFSSTCWR 388

Query: 188 DT-------------------------LIKFEVAMKSPSRNF----------------RV 232
                                      + +F+VAMK+    F                 +
Sbjct: 389 VEEHHLPLLCYLHLGAPKIWYGIPGRYIGQFDVAMKNLPEFFVEQKRFHRGMVSQPSIAM 448

[Close]

BLAST of Csor.00g106710 vs. ExPASy TrEMBL
Match: A0A5A7TKW1 (Putative lysine-specific demethylase JMJ16 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G005260 PE=4 SV=1)

HSP 1 Score: 164 bits (415), Expect = 9.16e-43
Identity = 127/327 (38.84%), Postives = 152/327 (46.48%), Query Frame = 0


Query: 9   HSENITKKRRRLEYECGNRCLKDSDESCGSDQKGPYSELGQEF----------------- 68
           H  ++  KRRRL+  CGNRCL D DESC   ++G  SELG+EF                 
Sbjct: 209 HCVDMKNKRRRLDSVCGNRCLMDPDESC---KQGQNSELGREFTLKVFKSYADDFKSQYF 268

Query: 69  -------NSQSVQKAMQMTLNPNISAVE-----------MRSQVLYGDS-LGSPSLGSGF 128
                  N+++    +     P +  VE            + +VLYGDS L S  LGSGF
Sbjct: 269 SSGNKDTNTETKSPMLGEQWEPLVDQVEGEYRRILENPTEQIEVLYGDSSLSSLLLGSGF 328

Query: 129 PSSPSSPIEPGHVDHMDSGWNLNNLPRLPGSLLSFDSFKTCSILSPRVHVGMCFSTACWE 188
           PSS S   EPGH DHMDSGW LNNLPRLPGSLLS DSFKT SIL PR+ VGMCFSTA W 
Sbjct: 329 PSSSSPLNEPGHADHMDSGWKLNNLPRLPGSLLSLDSFKTSSILLPRLCVGMCFSTAPWR 388

Query: 189 -------------------------DTLIKFEVAMKSPSRNF---------RVWNRED-- 232
                                      + KF+V MKS   NF         +V N+    
Sbjct: 389 VEEHHLPLLCYLHLGAPKIWYGIPGRCIDKFDVVMKSLPENFVGRQSFLITQVVNQPSIT 448

[Close]

BLAST of Csor.00g106710 vs. ExPASy TrEMBL
Match: A0A1S3BHW0 (putative lysine-specific demethylase JMJ16 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103489738 PE=4 SV=1)

HSP 1 Score: 163 bits (412), Expect = 1.30e-42
Identity = 127/327 (38.84%), Postives = 151/327 (46.18%), Query Frame = 0


Query: 9   HSENITKKRRRLEYECGNRCLKDSDESCGSDQKGPYSELGQEF----------------- 68
           H  ++  KRRRL+  CGNRCL D DESC   ++G  SELG+EF                 
Sbjct: 90  HCVDMKNKRRRLDSVCGNRCLMDPDESC---KQGQNSELGREFTLKVFKSYADDFKSQYF 149

Query: 69  -------NSQSVQKAMQMTLNPNISAVE-----------MRSQVLYGDS-LGSPSLGSGF 128
                  N+++    +     P +  VE            + +VLYGDS L S  LGSGF
Sbjct: 150 SSGNKDTNTETKSPMLGEQWEPLVDQVEGEYRRILENPTEQIEVLYGDSSLSSLLLGSGF 209

Query: 129 PSSPSSPIEPGHVDHMDSGWNLNNLPRLPGSLLSFDSFKTCSILSPRVHVGMCFSTACWE 188
           PSS S   EPGH DHMDSGW LNNLPRLPGSLLS DSFKT SIL PR+ VGMCFSTA W 
Sbjct: 210 PSSSSPLNEPGHADHMDSGWKLNNLPRLPGSLLSLDSFKTSSILLPRLCVGMCFSTAPWR 269

Query: 189 DT-------------------------LIKFEVAMKSPSRNF---------RVWNRED-- 232
                                      + KF+V MKS   NF          V N+    
Sbjct: 270 VEEHHLPLLCYLHLGAPKIWYGIPGRYIDKFDVVMKSLPENFVGRQRSHRGMVVNQPSIT 329

[Close]

BLAST of Csor.00g106710 vs. TAIR 10
Match: AT2G34880.1 (Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein )

HSP 1 Score: 75.9 bits (185), Expect = 4.9e-14
Identity = 49/131 (37.40%), Postives = 65/131 (49.62%), Query Frame = 0


Query: 22  YECGNRCLKDSDESCGSDQKGPYSELGQEFNSQSVQKAMQMTLNPNISAVEMRSQVLYGD 81
           +E G     +  E    D K  Y E        SV++ ++      I       +VLYG 
Sbjct: 177 FESGPEFTLEKFEKYAQDFKDSYFERKDNVGDPSVEE-IEGEYWRIIEKETNEVKVLYGT 236

Query: 82  SLGSPSLGSGFPSSPSSPIEPGHVD-HMDSGWNLNNLPRLPGSLLSFDSFKTCSILSPRV 141
            L +P LGSGF      P     +D ++ SGWNLNNL RL GSLLSF+  +   +  P +
Sbjct: 237 DLENPILGSGFSKGVKIPTRRNDMDKYISSGWNLNNLARLQGSLLSFEDCEISGVQVPWL 296

Query: 142 HVGMCFSTACW 152
           +VGMCFST CW
Sbjct: 297 YVGMCFSTFCW 306

[Close]

BLAST of Csor.00g106710 vs. TAIR 10
Match: AT1G08620.1 (Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein )

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-13
Identity = 37/77 (48.05%), Postives = 47/77 (61.04%), Query Frame = 0


Query: 76  QVLYGDSLGSPSLGSGFPSSPSSPIEPGHVD-HMDSGWNLNNLPRLPGSLLSFDSFKTCS 135
           +VLYG  L +   GSGFP   SS       D +  SGWNLNN PRLPGSLL ++      
Sbjct: 330 EVLYGADLETGVFGSGFPKISSSHNASSSEDKYAKSGWNLNNFPRLPGSLLKYEGSDISG 389

Query: 136 ILSPRVHVGMCFSTACW 152
           +L P +++GMCFS+ CW
Sbjct: 390 VLVPWLYIGMCFSSFCW 406

[Close]

BLAST of Csor.00g106710 vs. TAIR 10
Match: AT1G08620.2 (Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein )

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-13
Identity = 37/77 (48.05%), Postives = 47/77 (61.04%), Query Frame = 0


Query: 76  QVLYGDSLGSPSLGSGFPSSPSSPIEPGHVD-HMDSGWNLNNLPRLPGSLLSFDSFKTCS 135
           +VLYG  L +   GSGFP   SS       D +  SGWNLNN PRLPGSLL ++      
Sbjct: 330 EVLYGADLETGVFGSGFPKISSSHNASSSEDKYAKSGWNLNNFPRLPGSLLKYEGSDISG 389

Query: 136 ILSPRVHVGMCFSTACW 152
           +L P +++GMCFS+ CW
Sbjct: 390 VLVPWLYIGMCFSSFCW 406

[Close]

BLAST of Csor.00g106710 vs. TAIR 10
Match: AT4G20400.1 (JUMONJI 14 )

HSP 1 Score: 72.8 bits (177), Expect = 4.1e-13
Identity = 62/192 (32.29%), Postives = 84/192 (43.75%), Query Frame = 0


Query: 4   VDLLKHSENITK-------KRRRLEYECGNRCLKDSD----ESCGSDQKGPYS-ELGQEF 63
           +DLL++ E I K       KRRR+      R  +DS      S  SD +G +  + G +F
Sbjct: 118 IDLLQNREPIKKSTKTKKRKRRRISKIGYTRRKRDSGCDTASSGSSDSEGKFGFQTGPDF 177

Query: 64  NSQSVQK--------AMQMTLNPNISAVEMRS-----------------------QVLYG 123
             +  QK          Q   +P   A E +                        +V YG
Sbjct: 178 TLEEFQKYDEYFKECYFQSEDHPGSKASENKKFKPKVKDLEGEYWRIVEQATDEVEVYYG 237

Query: 124 DSLGSPSLGSGFPS-SPSSPIEPGHVDHMDSGWNLNNLPRLPGSLLSFDSFKTCSILSPR 152
             L +   GSGFP   P  PI      +   GWNLNNL RLPGS+L+F+S     ++ P 
Sbjct: 238 ADLETKKFGSGFPKYKPGYPISEAD-QYSQCGWNLNNLSRLPGSVLAFESCDISGVIVPW 297

[Close]

BLAST of Csor.00g106710 vs. TAIR 10
Match: AT4G20400.2 (JUMONJI 14 )

HSP 1 Score: 72.8 bits (177), Expect = 4.1e-13
Identity = 62/192 (32.29%), Postives = 84/192 (43.75%), Query Frame = 0


Query: 4   VDLLKHSENITK-------KRRRLEYECGNRCLKDSD----ESCGSDQKGPYS-ELGQEF 63
           +DLL++ E I K       KRRR+      R  +DS      S  SD +G +  + G +F
Sbjct: 61  IDLLQNREPIKKSTKTKKRKRRRISKIGYTRRKRDSGCDTASSGSSDSEGKFGFQTGPDF 120

Query: 64  NSQSVQK--------AMQMTLNPNISAVEMRS-----------------------QVLYG 123
             +  QK          Q   +P   A E +                        +V YG
Sbjct: 121 TLEEFQKYDEYFKECYFQSEDHPGSKASENKKFKPKVKDLEGEYWRIVEQATDEVEVYYG 180

Query: 124 DSLGSPSLGSGFPS-SPSSPIEPGHVDHMDSGWNLNNLPRLPGSLLSFDSFKTCSILSPR 152
             L +   GSGFP   P  PI      +   GWNLNNL RLPGS+L+F+S     ++ P 
Sbjct: 181 ADLETKKFGSGFPKYKPGYPISEAD-QYSQCGWNLNNLSRLPGSVLAFESCDISGVIVPW 240

The following BLAST results are available for this feature:

BLAST of Csor.00g106710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q53WJ1	3.1e-13	35.29	Lysine-specific demethylase JMJ703 OS=Oryza sativa subsp. japonica OX=39947 GN=J...	[more]
O64752	6.9e-13	37.40	Lysine-specific demethylase JMJ15 OS=Arabidopsis thaliana OX=3702 GN=JMJ15 PE=2 ...	[more]
C0SUT9	1.5e-12	48.05	Putative lysine-specific demethylase JMJ16 OS=Arabidopsis thaliana OX=3702 GN=JM...	[more]
Q8GUI6	5.8e-12	32.29	Probable lysine-specific demethylase JMJ14 OS=Arabidopsis thaliana OX=3702 GN=JM...	[more]
F4I6G4	1.7e-11	47.37	Lysine-specific demethylase JMJ18 OS=Arabidopsis thaliana OX=3702 GN=JMJ18 PE=2 ...	[more]

BLAST of Csor.00g106710 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6573501.1	3.82e-172	100.00	Lysine-specific demethylase JMJ15, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023004812.1	6.45e-79	49.70	putative lysine-specific demethylase JMJ16 [Cucurbita maxima] >XP_023004814.1 pu...	[more]
XP_022960375.1	2.76e-78	49.09	putative lysine-specific demethylase JMJ16 [Cucurbita moschata] >XP_022960376.1 ...	[more]
XP_023515071.1	3.85e-78	49.09	putative lysine-specific demethylase JMJ16 [Cucurbita pepo subsp. pepo]	[more]
KAG6593057.1	1.02e-77	50.32	Lysine-specific demethylase, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Csor.00g106710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KXD9	3.12e-79	49.70	putative lysine-specific demethylase JMJ16 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1H785	1.34e-78	49.09	putative lysine-specific demethylase JMJ16 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1DQR3	1.47e-53	39.57	putative lysine-specific demethylase JMJ16 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A5A7TKW1	9.16e-43	38.84	Putative lysine-specific demethylase JMJ16 isoform X1 OS=Cucumis melo var. makuw...	[more]
A0A1S3BHW0	1.30e-42	38.84	putative lysine-specific demethylase JMJ16 isoform X3 OS=Cucumis melo OX=3656 GN...	[more]

BLAST of Csor.00g106710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34880.1	4.9e-14	37.40	Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) fam...	[more]
AT1G08620.1	1.1e-13	48.05	Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) fam...	[more]
AT1G08620.2	1.1e-13	48.05	Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) fam...	[more]
AT4G20400.1	4.1e-13	32.29	JUMONJI 14	[more]
AT4G20400.2	4.1e-13	32.29	JUMONJI 14	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.120.650	Cupin	coord: 15..169 e-value: 2.0E-16 score: 62.2
None	No IPR available	PANTHER	PTHR10694	LYSINE-SPECIFIC DEMETHYLASE	coord: 76..152
None	No IPR available	PANTHER	PTHR10694:SF54	INACTIVE LYSINE-SPECIFIC DEMETHYLASE JMJ19-RELATED	coord: 76..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g106710.m01	Csor.00g106710.m01	mRNA