Csor.00g099890 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g099890
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionnuclear transcription factor Y subunit B-3-like
LocationCsor_Chr20: 3234175 .. 3234780 (+)
RNA-Seq ExpressionCsor.00g099890
SyntenyCsor.00g099890
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGAATCGGATAACGAATCGGGAGGGCACAACAGCAACGCGAACAGCGAGCTGTCTGCGAAGGAGCAGGACAGATTCTTGCCGATAGCGAACGTGAGCAGGATCATGAAGAAGGCGTTACCAGCAAACGCGAAGATCTCAAAAGATGCAAAAGAAACGGTACAAGAGTGCGTGTCGGAGTTTATAAGCTTCATAACAGGAGAGGCGTCAGACAAGTGCCAGAGAGAGAAGAGGAAGACAATCAACGGCGACGATTTGCTGTGGGCCATGACGACGCTAGGATTCGAAGAGTATGTGGAACCGCTCAAGACTTATCTGCAGAAGTACAGGGAATTGGAAGGGGAAAAGAGCACTATGGGGAGACAGGGGGAGAAAGACGGTAGTGGTGGTGGTGGGCCCAGCGGCAGTGGTGCTAGTGGTGGAGTCAACTCTAGTACTGGTGGTGGTGGTGGTGTTGGCGGCGGTGGATTCAACGGAGTGGGTGGAATGTATGGTGGGATGATGATGATGGGGCATCATCAGGGAGGCGTTTATGGCAGTAGTGGTGGATATCATCACATGGGAATCGGCGGAGGGAAGGAAGGAAATAGTGGTTCCCGGTAG

mRNA sequence

ATGGCGGAATCGGATAACGAATCGGGAGGGCACAACAGCAACGCGAACAGCGAGCTGTCTGCGAAGGAGCAGGACAGATTCTTGCCGATAGCGAACGTGAGCAGGATCATGAAGAAGGCGTTACCAGCAAACGCGAAGATCTCAAAAGATGCAAAAGAAACGGTACAAGAGTGCGTGTCGGAGTTTATAAGCTTCATAACAGGAGAGGCGTCAGACAAGTGCCAGAGAGAGAAGAGGAAGACAATCAACGGCGACGATTTGCTGTGGGCCATGACGACGCTAGGATTCGAAGAGTATGTGGAACCGCTCAAGACTTATCTGCAGAAGTACAGGGAATTGGAAGGGGAAAAGAGCACTATGGGGAGACAGGGGGAGAAAGACGGTAGTGGTGGTGGTGGGCCCAGCGGCAGTGGTGCTAGTGGTGGAGTCAACTCTAGTACTGGTGGTGGTGGTGGTGTTGGCGGCGGTGGATTCAACGGAGTGGGTGGAATGTATGGTGGGATGATGATGATGGGGCATCATCAGGGAGGCGTTTATGGCAGTAGTGGTGGATATCATCACATGGGAATCGGCGGAGGGAAGGAAGGAAATAGTGGTTCCCGGTAG

Coding sequence (CDS)

ATGGCGGAATCGGATAACGAATCGGGAGGGCACAACAGCAACGCGAACAGCGAGCTGTCTGCGAAGGAGCAGGACAGATTCTTGCCGATAGCGAACGTGAGCAGGATCATGAAGAAGGCGTTACCAGCAAACGCGAAGATCTCAAAAGATGCAAAAGAAACGGTACAAGAGTGCGTGTCGGAGTTTATAAGCTTCATAACAGGAGAGGCGTCAGACAAGTGCCAGAGAGAGAAGAGGAAGACAATCAACGGCGACGATTTGCTGTGGGCCATGACGACGCTAGGATTCGAAGAGTATGTGGAACCGCTCAAGACTTATCTGCAGAAGTACAGGGAATTGGAAGGGGAAAAGAGCACTATGGGGAGACAGGGGGAGAAAGACGGTAGTGGTGGTGGTGGGCCCAGCGGCAGTGGTGCTAGTGGTGGAGTCAACTCTAGTACTGGTGGTGGTGGTGGTGTTGGCGGCGGTGGATTCAACGGAGTGGGTGGAATGTATGGTGGGATGATGATGATGGGGCATCATCAGGGAGGCGTTTATGGCAGTAGTGGTGGATATCATCACATGGGAATCGGCGGAGGGAAGGAAGGAAATAGTGGTTCCCGGTAG

Protein sequence

MAESDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEKSTMGRQGEKDGSGGGGPSGSGASGGVNSSTGGGGGVGGGGFNGVGGMYGGMMMMGHHQGGVYGSSGGYHHMGIGGGKEGNSGSR
Homology
BLAST of Csor.00g099890 vs. ExPASy Swiss-Prot
Match: O23310 (Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NFYB3 PE=1 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 3.7e-55
Identity = 122/150 (81.33%), Postives = 132/150 (88.00%), Query Frame = 0

Query: 1   MAESDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MA+SDN+SGGH    N+  S +EQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNDSGGHKDGGNA--STREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEK-ST 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFE+YVEPLK YLQKYRE+EGEK +T
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTT 120

Query: 121 MGRQGEKDGSGGGGPSGSGASGGVNSSTGG 150
            GRQG+K+G GGGG +GSG SGG     GG
Sbjct: 121 AGRQGDKEGGGGGGGAGSG-SGGAPMYGGG 147

BLAST of Csor.00g099890 vs. ExPASy Swiss-Prot
Match: Q69J40 (Nuclear transcription factor Y subunit B-10 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB10 PE=1 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.8e-47
Identity = 133/216 (61.57%), Postives = 144/216 (66.67%), Query Frame = 0

Query: 1   MAESDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           M +SDNESGG  SNA    SA+EQDRFLPIANVSRIMK+ALPANAKISKDAKETVQECVS
Sbjct: 1   MPDSDNESGG-PSNAGEYASAREQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFE+Y++PLK YL K+RELEGEK+  
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYIDPLKLYLHKFRELEGEKAIG 120

Query: 121 GRQGEKDGSGGGGPSGSGASG-GVNSSTGGGGGVGGGGFNGVGGMYGGMMMMG------- 180
                  GSGGGG + SG SG G  S          GG+   GG  G +MMMG       
Sbjct: 121 AA-----GSGGGGAASSGGSGSGSGSHHHQDASRNNGGYGMYGGGGGMIMMMGQPMYGSP 180

Query: 181 ---------------HHQGGVYGSSGGYHHMGIGGG 194
                          HH   V G  G Y H G GGG
Sbjct: 181 PASSAGYAQPPPPHHHHHQMVMGGKGAYGHGGGGGG 210

BLAST of Csor.00g099890 vs. ExPASy Swiss-Prot
Match: Q9FGJ3 (Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NFYB2 PE=1 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.2e-44
Identity = 122/202 (60.40%), Postives = 140/202 (69.31%), Query Frame = 0

Query: 1   MAESDNESG----GHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQ 60
           M +SD +SG    G+N N  S LS +EQDRFLPIANVSRIMKKALPANAKISKDAKET+Q
Sbjct: 1   MGDSDRDSGGGQNGNNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQ 60

Query: 61  ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGE 120
           ECVSEFISF+TGEASDKCQ+EKRKTINGDDLLWAMTTLGFE+YVEPLK YLQ++RE+EGE
Sbjct: 61  ECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGE 120

Query: 121 KSTMGRQGEKDGSGGGGPSGSGASGGVNSSTGGGGGVGGGGFNGVGGMYGGMMMMGHHQG 180
           ++ +GR         GG  G      V     GGG  GGGG    G  Y       H Q 
Sbjct: 121 RTGLGRPQT------GGEVGEHQRDAVGD---GGGFYGGGG----GMQYHQHHQFLHQQN 180

Query: 181 GVYGSSGGYHHMGIGGGKEGNS 199
            +YG++GG    G GG   G +
Sbjct: 181 HMYGATGGGSDSG-GGAASGRT 188

BLAST of Csor.00g099890 vs. ExPASy Swiss-Prot
Match: Q75IZ7 (Nuclear transcription factor Y subunit B-8 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB8 PE=1 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.7e-42
Identity = 122/209 (58.37%), Postives = 139/209 (66.51%), Query Frame = 0

Query: 1   MAESDNESGGHNSNANSELSA-KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECV 60
           M +SDN+SGG ++ A  ELS+ +EQDRFLPIANVSRIMKKALPANAKISKDAKETVQECV
Sbjct: 1   MPDSDNDSGGPSNYAGGELSSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECV 60

Query: 61  SEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEKST 120
           SEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFE+YV+PLK YL K+RE+EGE++ 
Sbjct: 61  SEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVDPLKHYLHKFREIEGERAA 120

Query: 121 MGRQGEKDGSGGGGP----SGSGASGGVNSSTGGGGGVGGGGFNGVGGMYGG------MM 180
               G    +    P      + A+GG       G G GG        MYG         
Sbjct: 121 ASTTGAGTSAASTTPPQQQHTANAAGGYAGYAAPGAGPGGMMMMMGQPMYGSPPPPPQQQ 180

Query: 181 MMGHHQGGVYGSSGGYHHMGIGGGKEGNS 199
              HH   + G  G  HH G GGG   +S
Sbjct: 181 QQQHHHMAMGGRGGFGHHPGGGGGGSSSS 209

BLAST of Csor.00g099890 vs. ExPASy Swiss-Prot
Match: Q0J7P4 (Nuclear transcription factor Y subunit B-11 OS=Oryza sativa subsp. japonica OX=39947 GN=HD5 PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.0e-37
Identity = 108/186 (58.06%), Postives = 125/186 (67.20%), Query Frame = 0

Query: 11  HNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEA 70
           +      +  AKEQDRFLPIANVSRIMK++LPANAKISK++KETVQECVSEFISF+TGEA
Sbjct: 46  YGGGGGGDSPAKEQDRFLPIANVSRIMKRSLPANAKISKESKETVQECVSEFISFVTGEA 105

Query: 71  SDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEKSTMGRQGEKDGSG 130
           SDKCQREKRKTINGDDLLWAMTTLGFE YV PLK+YL +YRE EGEK+        D  G
Sbjct: 106 SDKCQREKRKTINGDDLLWAMTTLGFEAYVGPLKSYLNRYREAEGEKA--------DVLG 165

Query: 131 GGGPSGSGASGGVNSSTGGGGGVGGGGFNGVGGMYGGMMMMGHHQGGVYGSSGGYHHMGI 190
           G G + +   G      GGGGG  G   +G   + GG  +   H G      GG   + +
Sbjct: 166 GAGGAAAARHGEGGCCGGGGGGADGVVIDGHYPLAGG--LSHSHHGHQQQDGGGDVGLMM 221

Query: 191 GGGKEG 197
           GGG  G
Sbjct: 226 GGGDAG 221

BLAST of Csor.00g099890 vs. NCBI nr
Match: XP_022943898.1 (nuclear transcription factor Y subunit B-3-like [Cucurbita moschata] >KAG6570947.1 Nuclear transcription factor Y subunit B-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 365 bits (938), Expect = 7.36e-127
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0

Query: 1   MAESDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MAESDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MAESDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEKSTM 120

Query: 121 GRQGEKDGSGGGGPSGSGASGGVNSSTGGGGGVGGGGFNGVGGMYGGMMMMGHHQGGVYG 180
           GRQGEKDGSGGGGPSGSGASGGVNSSTGGGGGVGGGGFNGVGGMYGGMMMMGHHQGGVYG
Sbjct: 121 GRQGEKDGSGGGGPSGSGASGGVNSSTGGGGGVGGGGFNGVGGMYGGMMMMGHHQGGVYG 180

Query: 181 SSGGYHHMGIGGGKEGNSGSR 201
           SSGGYHHMGIGGGKEGNSGSR
Sbjct: 181 SSGGYHHMGIGGGKEGNSGSR 201

BLAST of Csor.00g099890 vs. NCBI nr
Match: XP_023513391.1 (nuclear transcription factor Y subunit B-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 352 bits (903), Expect = 1.59e-121
Identity = 198/201 (98.51%), Postives = 198/201 (98.51%), Query Frame = 0

Query: 1   MAESDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MAESDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MAESDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEKSTM 120

Query: 121 GRQGEKDGSGGGG-PSGSGASGGVNSSTGGGGGVGGGGFNGVGGMYGGMMMMGHHQGGVY 180
           GRQGEKDGSGGGG PSGSGASGGVNSSTGGGG VGGGGFNGVGGMYGGMMMMGHHQGGVY
Sbjct: 121 GRQGEKDGSGGGGGPSGSGASGGVNSSTGGGG-VGGGGFNGVGGMYGGMMMMGHHQGGVY 180

Query: 181 GSSGGYHHMGIGGGKEGNSGS 200
           GS GGYHHMGIGGGKEGNSGS
Sbjct: 181 GSGGGYHHMGIGGGKEGNSGS 200

BLAST of Csor.00g099890 vs. NCBI nr
Match: XP_022985725.1 (nuclear transcription factor Y subunit B-3-like [Cucurbita maxima])

HSP 1 Score: 350 bits (897), Expect = 1.40e-120
Identity = 198/204 (97.06%), Postives = 198/204 (97.06%), Query Frame = 0

Query: 1   MAESDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MAESDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MAESDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEKSTM 120

Query: 121 GRQGEKDGSGGGGPSGSGASGG---VNSSTGGGGGVGGGGFNGVGGMYGGMMMMGHHQGG 180
            RQGEKDGSGGGGP GSGASGG   VNSSTGGGG VGGGGFNGVGGMYGGMMMMGHHQGG
Sbjct: 121 VRQGEKDGSGGGGPGGSGASGGGGGVNSSTGGGG-VGGGGFNGVGGMYGGMMMMGHHQGG 180

Query: 181 VYGSSGGYHHMGIGGGKEGNSGSR 201
           VYGSSGGYHHMGIGGGKEGNSGSR
Sbjct: 181 VYGSSGGYHHMGIGGGKEGNSGSR 203

BLAST of Csor.00g099890 vs. NCBI nr
Match: XP_023532503.1 (nuclear transcription factor Y subunit B-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 313 bits (801), Expect = 6.81e-106
Identity = 183/205 (89.27%), Postives = 189/205 (92.20%), Query Frame = 0

Query: 1   MAESDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MA+SDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQKYRE+EGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKSYLQKYREMEGEKSTM 120

Query: 121 GR-QGEKDGSGGGG-PSGSGAS---GGVNSSTGGGGGVGGGGFNGVGGMYGGMMMMGHHQ 180
           G  +GEKDG GGGG P GSGA+   GGVN  TGGG  V GGGFNGVGGMYGGMMMMGHHQ
Sbjct: 121 GGGKGEKDGGGGGGGPGGSGANVGGGGVNPGTGGG--VSGGGFNGVGGMYGGMMMMGHHQ 180

Query: 181 GGVYGSSGGYHHMGIGGGKEGNSGS 200
           GGVYGS GG+HHMGIGGGK GN GS
Sbjct: 181 GGVYGS-GGFHHMGIGGGKGGNGGS 202

BLAST of Csor.00g099890 vs. NCBI nr
Match: XP_022947534.1 (nuclear transcription factor Y subunit B-3-like [Cucurbita moschata] >KAG6604918.1 Nuclear transcription factor Y subunit B-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 308 bits (790), Expect = 3.58e-104
Identity = 182/208 (87.50%), Postives = 188/208 (90.38%), Query Frame = 0

Query: 1   MAESDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MA+SDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQKYRE+EGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKSYLQKYREMEGEKSTM 120

Query: 121 GR-QGEKDGSGGGG-PSGSGAS------GGVNSSTGGGGGVGGGGFNGVGGMYGGMMMMG 180
           G  +GEKDG GGGG P GSGA+      GGVN  TGGG  V GGGFNGVGGMYGGMMMMG
Sbjct: 121 GGGKGEKDGGGGGGGPGGSGANVGGGGGGGVNPGTGGG--VSGGGFNGVGGMYGGMMMMG 180

Query: 181 HHQGGVYGSSGGYHHMGIGGGKEGNSGS 200
           HHQGGVYGS GG+H MGIGGGK GN GS
Sbjct: 181 HHQGGVYGS-GGFHQMGIGGGKGGNGGS 205

BLAST of Csor.00g099890 vs. ExPASy TrEMBL
Match: A0A6J1FXH2 (nuclear transcription factor Y subunit B-3-like OS=Cucurbita moschata OX=3662 GN=LOC111448486 PE=3 SV=1)

HSP 1 Score: 365 bits (938), Expect = 3.56e-127
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0

Query: 1   MAESDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MAESDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MAESDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEKSTM 120

Query: 121 GRQGEKDGSGGGGPSGSGASGGVNSSTGGGGGVGGGGFNGVGGMYGGMMMMGHHQGGVYG 180
           GRQGEKDGSGGGGPSGSGASGGVNSSTGGGGGVGGGGFNGVGGMYGGMMMMGHHQGGVYG
Sbjct: 121 GRQGEKDGSGGGGPSGSGASGGVNSSTGGGGGVGGGGFNGVGGMYGGMMMMGHHQGGVYG 180

Query: 181 SSGGYHHMGIGGGKEGNSGSR 201
           SSGGYHHMGIGGGKEGNSGSR
Sbjct: 181 SSGGYHHMGIGGGKEGNSGSR 201

BLAST of Csor.00g099890 vs. ExPASy TrEMBL
Match: A0A6J1JC44 (nuclear transcription factor Y subunit B-3-like OS=Cucurbita maxima OX=3661 GN=LOC111483695 PE=3 SV=1)

HSP 1 Score: 350 bits (897), Expect = 6.78e-121
Identity = 198/204 (97.06%), Postives = 198/204 (97.06%), Query Frame = 0

Query: 1   MAESDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MAESDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MAESDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEKSTM 120

Query: 121 GRQGEKDGSGGGGPSGSGASGG---VNSSTGGGGGVGGGGFNGVGGMYGGMMMMGHHQGG 180
            RQGEKDGSGGGGP GSGASGG   VNSSTGGGG VGGGGFNGVGGMYGGMMMMGHHQGG
Sbjct: 121 VRQGEKDGSGGGGPGGSGASGGGGGVNSSTGGGG-VGGGGFNGVGGMYGGMMMMGHHQGG 180

Query: 181 VYGSSGGYHHMGIGGGKEGNSGSR 201
           VYGSSGGYHHMGIGGGKEGNSGSR
Sbjct: 181 VYGSSGGYHHMGIGGGKEGNSGSR 203

BLAST of Csor.00g099890 vs. ExPASy TrEMBL
Match: A0A6J1G731 (nuclear transcription factor Y subunit B-3-like OS=Cucurbita moschata OX=3662 GN=LOC111451370 PE=3 SV=1)

HSP 1 Score: 308 bits (790), Expect = 1.73e-104
Identity = 182/208 (87.50%), Postives = 188/208 (90.38%), Query Frame = 0

Query: 1   MAESDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MA+SDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQKYRE+EGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKSYLQKYREMEGEKSTM 120

Query: 121 GR-QGEKDGSGGGG-PSGSGAS------GGVNSSTGGGGGVGGGGFNGVGGMYGGMMMMG 180
           G  +GEKDG GGGG P GSGA+      GGVN  TGGG  V GGGFNGVGGMYGGMMMMG
Sbjct: 121 GGGKGEKDGGGGGGGPGGSGANVGGGGGGGVNPGTGGG--VSGGGFNGVGGMYGGMMMMG 180

Query: 181 HHQGGVYGSSGGYHHMGIGGGKEGNSGS 200
           HHQGGVYGS GG+H MGIGGGK GN GS
Sbjct: 181 HHQGGVYGS-GGFHQMGIGGGKGGNGGS 205

BLAST of Csor.00g099890 vs. ExPASy TrEMBL
Match: A0A6J1I2E0 (nuclear transcription factor Y subunit B-3-like OS=Cucurbita maxima OX=3661 GN=LOC111469875 PE=3 SV=1)

HSP 1 Score: 308 bits (789), Expect = 2.46e-104
Identity = 182/208 (87.50%), Postives = 188/208 (90.38%), Query Frame = 0

Query: 1   MAESDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MA+SDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQKYRE+EGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKSYLQKYREMEGEKSTM 120

Query: 121 GR-QGEKDGSGGGG-PSGSGAS------GGVNSSTGGGGGVGGGGFNGVGGMYGGMMMMG 180
           G  +GEKDG GGGG P GSGA+      GGVN  TGGG  V GGGFNGVGGMYGGMMMM 
Sbjct: 121 GGGKGEKDGGGGGGGPGGSGANVGGGGGGGVNPGTGGG--VSGGGFNGVGGMYGGMMMMV 180

Query: 181 HHQGGVYGSSGGYHHMGIGGGKEGNSGS 200
           HHQGGVYGS GG+HHMGIGGGK GN GS
Sbjct: 181 HHQGGVYGS-GGFHHMGIGGGKGGNGGS 205

BLAST of Csor.00g099890 vs. ExPASy TrEMBL
Match: A0A1S3CMC5 (nuclear transcription factor Y subunit B-3 OS=Cucumis melo OX=3656 GN=LOC103502105 PE=3 SV=1)

HSP 1 Score: 307 bits (787), Expect = 3.51e-104
Identity = 177/196 (90.31%), Postives = 183/196 (93.37%), Query Frame = 0

Query: 1   MAESDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MA+SDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRE+EGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120

Query: 121 GRQGEKDGSGGGGPSGSGASGGVNSSTGGGGGVGGGGFNGVGGMYGGMMMMGHHQGGVYG 180
           GRQGEKDG GGGGP GSG  GGVNSS    GG GGG +NGVGGMYGG+MMMGHHQGGVYG
Sbjct: 121 GRQGEKDG-GGGGPGGSG--GGVNSSGTAAGGAGGG-YNGVGGMYGGVMMMGHHQGGVYG 180

Query: 181 SSGGYHHMGIGGGKEG 196
            +G +HHMGIGGGK G
Sbjct: 181 GAG-FHHMGIGGGKGG 191

BLAST of Csor.00g099890 vs. TAIR 10
Match: AT4G14540.1 (nuclear factor Y, subunit B3 )

HSP 1 Score: 216.1 bits (549), Expect = 2.6e-56
Identity = 122/150 (81.33%), Postives = 132/150 (88.00%), Query Frame = 0

Query: 1   MAESDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MA+SDN+SGGH    N+  S +EQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNDSGGHKDGGNA--STREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEK-ST 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFE+YVEPLK YLQKYRE+EGEK +T
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTT 120

Query: 121 MGRQGEKDGSGGGGPSGSGASGGVNSSTGG 150
            GRQG+K+G GGGG +GSG SGG     GG
Sbjct: 121 AGRQGDKEGGGGGGGAGSG-SGGAPMYGGG 147

BLAST of Csor.00g099890 vs. TAIR 10
Match: AT5G47640.1 (nuclear factor Y, subunit B2 )

HSP 1 Score: 180.3 bits (456), Expect = 1.6e-45
Identity = 122/202 (60.40%), Postives = 140/202 (69.31%), Query Frame = 0

Query: 1   MAESDNESG----GHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQ 60
           M +SD +SG    G+N N  S LS +EQDRFLPIANVSRIMKKALPANAKISKDAKET+Q
Sbjct: 1   MGDSDRDSGGGQNGNNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQ 60

Query: 61  ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGE 120
           ECVSEFISF+TGEASDKCQ+EKRKTINGDDLLWAMTTLGFE+YVEPLK YLQ++RE+EGE
Sbjct: 61  ECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGE 120

Query: 121 KSTMGRQGEKDGSGGGGPSGSGASGGVNSSTGGGGGVGGGGFNGVGGMYGGMMMMGHHQG 180
           ++ +GR         GG  G      V     GGG  GGGG    G  Y       H Q 
Sbjct: 121 RTGLGRPQT------GGEVGEHQRDAVGD---GGGFYGGGG----GMQYHQHHQFLHQQN 180

Query: 181 GVYGSSGGYHHMGIGGGKEGNS 199
            +YG++GG    G GG   G +
Sbjct: 181 HMYGATGGGSDSG-GGAASGRT 188

BLAST of Csor.00g099890 vs. TAIR 10
Match: AT3G53340.1 (nuclear factor Y, subunit B10 )

HSP 1 Score: 171.8 bits (434), Expect = 5.6e-43
Identity = 90/141 (63.83%), Postives = 106/141 (75.18%), Query Frame = 0

Query: 1   MAESDNESGGHNSNANS------ELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKET 60
           MAES    GG  S+ +        L+ +EQDRFLPIAN+SRIMK+ LP N KI+KDAKET
Sbjct: 1   MAESQTGGGGGGSHESGGDQSPRSLNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKET 60

Query: 61  VQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELE 120
           +QECVSEFISF+T EASDKCQREKRKTINGDDLLWAM TLGFE+Y++PLK YL +YRE+E
Sbjct: 61  MQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREME 120

Query: 121 GEKSTMGRQGEKDGSGGGGPS 136
           G+    G+ GE      G PS
Sbjct: 121 GDTKGSGKGGESSAKRDGQPS 141

BLAST of Csor.00g099890 vs. TAIR 10
Match: AT2G13570.1 (nuclear factor Y, subunit B7 )

HSP 1 Score: 169.9 bits (429), Expect = 2.1e-42
Identity = 88/126 (69.84%), Postives = 103/126 (81.75%), Query Frame = 0

Query: 1   MAESDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           +AE++  S    +N N+  + KEQDRFLPIANV RIMKK LP N KISKDAKETVQECVS
Sbjct: 15  VAETNPGSPSSKTNNNNN-NNKEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVS 74

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEKSTM 120
           EFISF+TGEASDKCQREKRKTINGDD++WA+TTLGFE+YV PLK YL KYR+ EGEK   
Sbjct: 75  EFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEDYVAPLKVYLCKYRDTEGEKVNS 134

Query: 121 GRQGEK 127
            +Q ++
Sbjct: 135 PKQQQQ 139

BLAST of Csor.00g099890 vs. TAIR 10
Match: AT2G38880.2 (nuclear factor Y, subunit B1 )

HSP 1 Score: 167.2 bits (422), Expect = 1.4e-41
Identity = 89/134 (66.42%), Postives = 103/134 (76.87%), Query Frame = 0

Query: 4   SDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFI 63
           +D  S        S  S +EQDR+LPIAN+SRIMKKALP N KI KDAK+TVQECVSEFI
Sbjct: 2   ADTPSSPAGDGGESGGSVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEFI 61

Query: 64  SFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGEKSTMGRQ 123
           SFIT EASDKCQ+EKRKT+NGDDLLWAM TLGFE+Y+EPLK YL +YRELEG+    G+ 
Sbjct: 62  SFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEGDNKGSGKS 121

Query: 124 GE-KDGSGGGGPSG 137
           G+  +   GGG SG
Sbjct: 122 GDGSNRDAGGGVSG 135

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
O233103.7e-5581.33Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NF... [more]
Q69J402.8e-4761.57Nuclear transcription factor Y subunit B-10 OS=Oryza sativa subsp. japonica OX=3... [more]
Q9FGJ32.2e-4460.40Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NF... [more]
Q75IZ72.7e-4258.37Nuclear transcription factor Y subunit B-8 OS=Oryza sativa subsp. japonica OX=39... [more]
Q0J7P42.0e-3758.06Nuclear transcription factor Y subunit B-11 OS=Oryza sativa subsp. japonica OX=3... [more]
Match NameE-valueIdentityDescription
XP_022943898.17.36e-127100.00nuclear transcription factor Y subunit B-3-like [Cucurbita moschata] >KAG6570947... [more]
XP_023513391.11.59e-12198.51nuclear transcription factor Y subunit B-3-like [Cucurbita pepo subsp. pepo][more]
XP_022985725.11.40e-12097.06nuclear transcription factor Y subunit B-3-like [Cucurbita maxima][more]
XP_023532503.16.81e-10689.27nuclear transcription factor Y subunit B-3-like [Cucurbita pepo subsp. pepo][more]
XP_022947534.13.58e-10487.50nuclear transcription factor Y subunit B-3-like [Cucurbita moschata] >KAG6604918... [more]
Match NameE-valueIdentityDescription
A0A6J1FXH23.56e-127100.00nuclear transcription factor Y subunit B-3-like OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1JC446.78e-12197.06nuclear transcription factor Y subunit B-3-like OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1G7311.73e-10487.50nuclear transcription factor Y subunit B-3-like OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1I2E02.46e-10487.50nuclear transcription factor Y subunit B-3-like OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A1S3CMC53.51e-10490.31nuclear transcription factor Y subunit B-3 OS=Cucumis melo OX=3656 GN=LOC1035021... [more]
Match NameE-valueIdentityDescription
AT4G14540.12.6e-5681.33nuclear factor Y, subunit B3 [more]
AT5G47640.11.6e-4560.40nuclear factor Y, subunit B2 [more]
AT3G53340.15.6e-4363.83nuclear factor Y, subunit B10 [more]
AT2G13570.12.1e-4269.84nuclear factor Y, subunit B7 [more]
AT2G38880.21.4e-4166.42nuclear factor Y, subunit B1 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00615CCAATSUBUNTAcoord: 55..73
score: 50.24
coord: 93..111
score: 44.86
coord: 74..92
score: 38.52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availablePANTHERPTHR11064:SF128NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-3coord: 1..180
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 27..91
e-value: 1.9E-27
score: 95.3
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 14..133
e-value: 1.0E-47
score: 163.5
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 24..128
IPR027113Transcription factor NFYB/HAP3PANTHERPTHR11064CCAAT-BINDING TRANSCRIPTION FACTOR-RELATEDcoord: 1..180
IPR003956Transcription factor, NFYB/HAP3, conserved sitePROSITEPS00685NFYB_HAP3coord: 58..74

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g099890.m01Csor.00g099890.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045944 positive regulation of transcription by RNA polymerase II
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0016602 CCAAT-binding factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function GO:0043565 sequence-specific DNA binding