Csor.00g096230 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g096230
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RAB6-interacting golgin
Location	Csor_Chr14: 1262482 .. 1264057 (-)
RNA-Seq Expression	Csor.00g096230
Synteny	Csor.00g096230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCAGAACAGCACAGGAAGCTTGAGCTTCAGCAGCCATTTGTGTAAGGAAGATGAAGAGATTTCGAGGTCGGCTCTGTCCACTTTCAGAGCCAAAGAAGAGGAGATCGAGCGGAAGAAGATGGAGGTCAGAGAAAAGGTTCAAGCCCAGTTAGGCCGTGTTGAAGAAGAAACCAAACGTCTCGCTTGCATCCGTCAGGTAAAATTTCGGGGTTTTTCCTCCAAAATTTTCATGGGTTTTTCTTAGATTTTGGTTTATGAGACACCCTTTTAACTTTTGTGCTGTGTTTTACATGAATTTGGTGGGTTGGGTTTGGGGGGGAATGGGACATAAAATTATAGAACATCTCTTGAAACTGAGTATAATTTTGGGTAAATCTTCGTCCAAAATCTCTGTGGACAAGGGATTTTTAACCCATTTTGCCTGATTTAGTTCTATTATCTACGGCGTTTGGGATTAAATTAATATGTTGTGAAGGGATTAGAAGCGGCTCAAATCATTGTAAATGTCCATGATTTCCAACGGCAGGTGCTAACCACATAATCAACAATGCTTTGGTGTCGGTGGGTCGTATGAGTCATTCTATTCTAAGATTAGCTTAACTGGACAAGTAATTATAGAACAAGAGTATGCATGTGTAACGGCTCAAACCCACCACGAGTAGATATTGTCCCATTGGGCTTTCCCTTCCAAGCTTCCCTCAAGGTTTTAAAACGCGTCTACTATAGAGAGGGTCTAGCCTTACTCCCACCCGTGCCGTGCCTTGCACCGTCCGATGGCTAGCTCTAAAACCAATTGTAACAGTCCAAGCCCACTGCTACATTGGGTTTTCCGTTCTTGACTTTCCCTCAAGTTTCTAAAACCAATTGTAACAGTCTATTAGGGAGAGTTTTTCACACCCTTACAAGGAATGTTTCGTTCTCGTTTCGTTGGCCTAGGTAAGAAACAAAAATATGACAATGTATTGGTTTAGAGTTTGGAATTGGTTTTTTGGTGCTCTTGTTGTTTAGTTTCATGAATCAAAGTGTTGCAAACACCAGGAGCTCGAGGCGCTGACCGATCCAATGAGGAAGGAAGTGGCACAGTTTCGTAAGAAGGTCGACGCCGTAAACAAGGAATTGAAGCCTCTGGGACATATCTGTCAAAAGAAGGTAAGATATGGGGGAAGGAATAGCGCATTGCTTAGCATATAAGATGATATTGCATTCTGTGAATCTCAATTATTGAGCTGATGTTTGCATCCTTTGTCATAGGAAAAGGAGTACAGGGAAGCCCTCGAAGCCTTCAACGAAAAGAACAAGGAAAAAGTTCAGCTAATCAACAAACTAATGGAGGTAAATTCCCTCGAATTCCCTTAGTTTTCCACGATTTCGACGCATCAGTTCAGCCACTGTTCGAGGCGACTCGAACGGCCTCCATTAGTTAAAAACTGCGTTTCTTTTCGTGTATTCTCGTCTGAGTTTCGGTTGATGGATTGATTTGGTTTTTTGACGAGCAGCTGGTGAGCGAAAGCGAGAGGTTGAGGCTGAAGAAGCTGGAGGAGCTGAGTAAGAACATCGATACGATTCGATAA

mRNA sequence

ATGGTGCAGAACAGCACAGGAAGCTTGAGCTTCAGCAGCCATTTGTGTAAGGAAGATGAAGAGATTTCGAGGTCGGCTCTGTCCACTTTCAGAGCCAAAGAAGAGGAGATCGAGCGGAAGAAGATGGAGGTCAGAGAAAAGGTTCAAGCCCAGTTAGGCCGTGTTGAAGAAGAAACCAAACGTCTCGCTTGCATCCGTCAGGAGCTCGAGGCGCTGACCGATCCAATGAGGAAGGAAGTGGCACAGTTTCGTAAGAAGGTCGACGCCGTAAACAAGGAATTGAAGCCTCTGGGACATATCTGTCAAAAGAAGGAAAAGGAGTACAGGGAAGCCCTCGAAGCCTTCAACGAAAAGAACAAGGAAAAAGTTCAGCTAATCAACAAACTAATGGAGCTGGTGAGCGAAAGCGAGAGGTTGAGGCTGAAGAAGCTGGAGGAGCTGAGTAAGAACATCGATACGATTCGATAA

Coding sequence (CDS)

ATGGTGCAGAACAGCACAGGAAGCTTGAGCTTCAGCAGCCATTTGTGTAAGGAAGATGAAGAGATTTCGAGGTCGGCTCTGTCCACTTTCAGAGCCAAAGAAGAGGAGATCGAGCGGAAGAAGATGGAGGTCAGAGAAAAGGTTCAAGCCCAGTTAGGCCGTGTTGAAGAAGAAACCAAACGTCTCGCTTGCATCCGTCAGGAGCTCGAGGCGCTGACCGATCCAATGAGGAAGGAAGTGGCACAGTTTCGTAAGAAGGTCGACGCCGTAAACAAGGAATTGAAGCCTCTGGGACATATCTGTCAAAAGAAGGAAAAGGAGTACAGGGAAGCCCTCGAAGCCTTCAACGAAAAGAACAAGGAAAAAGTTCAGCTAATCAACAAACTAATGGAGCTGGTGAGCGAAAGCGAGAGGTTGAGGCTGAAGAAGCTGGAGGAGCTGAGTAAGAACATCGATACGATTCGATAA

Protein sequence

MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRQELEALTDPMRKEVAQFRKKVDAVNKELKPLGHICQKKEKEYREALEAFNEKNKEKVQLINKLMELVSESERLRLKKLEELSKNIDTIR

Homology

[Close]

BLAST of Csor.00g096230 vs. NCBI nr
Match: XP_022935581.1 (GRB10-interacting GYF protein 2-like [Cucurbita moschata] >XP_023526009.1 GRB10-interacting GYF protein 2-like [Cucurbita pepo subsp. pepo] >KAG6580679.1 hypothetical protein SDJN03_20681, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017433.1 hypothetical protein SDJN02_19298 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 274 bits (700), Expect = 4.40e-92
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 60
           MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK
Sbjct: 1   MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 60

Query: 61  RLACIRQELEALTDPMRKEVAQFRKKVDAVNKELKPLGHICQKKEKEYREALEAFNEKNK 120
           RLACIRQELEALTDPMRKEVAQFRKKVDAVNKELKPLGHICQKKEKEYREALEAFNEKNK
Sbjct: 61  RLACIRQELEALTDPMRKEVAQFRKKVDAVNKELKPLGHICQKKEKEYREALEAFNEKNK 120

Query: 121 EKVQLINKLMELVSESERLRLKKLEELSKNIDTIR 155
           EKVQLINKLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 EKVQLINKLMELVSESERLRLKKLEELSKNIDTIR 155

[Close]

BLAST of Csor.00g096230 vs. NCBI nr
Match: XP_022983144.1 (GRB10-interacting GYF protein 2-like [Cucurbita maxima])

HSP 1 Score: 271 bits (694), Expect = 3.62e-91
Identity = 154/155 (99.35%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 60
           MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK
Sbjct: 1   MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 60

Query: 61  RLACIRQELEALTDPMRKEVAQFRKKVDAVNKELKPLGHICQKKEKEYREALEAFNEKNK 120
           RLACIRQELEALTDPMRKEVAQFRKKVDAVNKELKPLGHICQKKEKEYREALEAFNEKNK
Sbjct: 61  RLACIRQELEALTDPMRKEVAQFRKKVDAVNKELKPLGHICQKKEKEYREALEAFNEKNK 120

Query: 121 EKVQLINKLMELVSESERLRLKKLEELSKNIDTIR 155
           EKVQLI KLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 EKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 155

[Close]

BLAST of Csor.00g096230 vs. NCBI nr
Match: XP_004137876.1 (GRB10-interacting GYF protein 2 [Cucumis sativus] >KGN59071.1 hypothetical protein Csa_000951 [Cucumis sativus])

HSP 1 Score: 256 bits (654), Expect = 6.79e-85
Identity = 145/155 (93.55%), Postives = 150/155 (96.77%), Query Frame = 0


Query: 1   MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 60
           MVQN+TGSLSFSSHL KEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK
Sbjct: 13  MVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 72

Query: 61  RLACIRQELEALTDPMRKEVAQFRKKVDAVNKELKPLGHICQKKEKEYREALEAFNEKNK 120
           RLACIR+ELEAL DPMRKEVAQ RKK+DAVNKELKPLGH CQKKEKEY+EALEAFN+KNK
Sbjct: 73  RLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNK 132

Query: 121 EKVQLINKLMELVSESERLRLKKLEELSKNIDTIR 155
           EKVQLI KLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 133 EKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of Csor.00g096230 vs. NCBI nr
Match: XP_038903091.1 (GRB10-interacting GYF protein 2-like [Benincasa hispida])

HSP 1 Score: 256 bits (654), Expect = 6.79e-85
Identity = 145/155 (93.55%), Postives = 150/155 (96.77%), Query Frame = 0


Query: 1   MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 60
           MVQN+TGSLSFSSHL KEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK
Sbjct: 13  MVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 72

Query: 61  RLACIRQELEALTDPMRKEVAQFRKKVDAVNKELKPLGHICQKKEKEYREALEAFNEKNK 120
           RLACIR+ELEAL DPMRKEVAQ RKK+DAVNKELKPLGH CQKKEKEY+EALEAFN+KNK
Sbjct: 73  RLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNK 132

Query: 121 EKVQLINKLMELVSESERLRLKKLEELSKNIDTIR 155
           EKVQLI KLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 133 EKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of Csor.00g096230 vs. NCBI nr
Match: XP_008442808.1 (PREDICTED: uncharacterized protein LOC103486581 [Cucumis melo] >KAA0043908.1 putative DNA double-strand break repair Rad50 ATPase isoform X2 [Cucumis melo var. makuwa] >TYK25229.1 putative DNA double-strand break repair Rad50 ATPase isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 255 bits (651), Expect = 1.94e-84
Identity = 144/155 (92.90%), Postives = 150/155 (96.77%), Query Frame = 0


Query: 1   MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 60
           MVQN+TGSLSFSSHL KEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK
Sbjct: 13  MVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 72

Query: 61  RLACIRQELEALTDPMRKEVAQFRKKVDAVNKELKPLGHICQKKEKEYREALEAFNEKNK 120
           RLACIR+ELEAL DPMRKEVAQ RK++DAVNKELKPLGH CQKKEKEY+EALEAFN+KNK
Sbjct: 73  RLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNK 132

Query: 121 EKVQLINKLMELVSESERLRLKKLEELSKNIDTIR 155
           EKVQLI KLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 133 EKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of Csor.00g096230 vs. ExPASy TrEMBL
Match: A0A6J1F531 (RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111442413 PE=3 SV=1)

HSP 1 Score: 274 bits (700), Expect = 2.13e-92
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 60
           MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK
Sbjct: 1   MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 60

Query: 61  RLACIRQELEALTDPMRKEVAQFRKKVDAVNKELKPLGHICQKKEKEYREALEAFNEKNK 120
           RLACIRQELEALTDPMRKEVAQFRKKVDAVNKELKPLGHICQKKEKEYREALEAFNEKNK
Sbjct: 61  RLACIRQELEALTDPMRKEVAQFRKKVDAVNKELKPLGHICQKKEKEYREALEAFNEKNK 120

Query: 121 EKVQLINKLMELVSESERLRLKKLEELSKNIDTIR 155
           EKVQLINKLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 EKVQLINKLMELVSESERLRLKKLEELSKNIDTIR 155

[Close]

BLAST of Csor.00g096230 vs. ExPASy TrEMBL
Match: A0A6J1J6H3 (RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111481783 PE=3 SV=1)

HSP 1 Score: 271 bits (694), Expect = 1.75e-91
Identity = 154/155 (99.35%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 60
           MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK
Sbjct: 1   MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 60

Query: 61  RLACIRQELEALTDPMRKEVAQFRKKVDAVNKELKPLGHICQKKEKEYREALEAFNEKNK 120
           RLACIRQELEALTDPMRKEVAQFRKKVDAVNKELKPLGHICQKKEKEYREALEAFNEKNK
Sbjct: 61  RLACIRQELEALTDPMRKEVAQFRKKVDAVNKELKPLGHICQKKEKEYREALEAFNEKNK 120

Query: 121 EKVQLINKLMELVSESERLRLKKLEELSKNIDTIR 155
           EKVQLI KLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 EKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 155

[Close]

BLAST of Csor.00g096230 vs. ExPASy TrEMBL
Match: A0A0A0LGI7 (RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_3G751460 PE=3 SV=1)

HSP 1 Score: 256 bits (654), Expect = 3.29e-85
Identity = 145/155 (93.55%), Postives = 150/155 (96.77%), Query Frame = 0


Query: 1   MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 60
           MVQN+TGSLSFSSHL KEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK
Sbjct: 13  MVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 72

Query: 61  RLACIRQELEALTDPMRKEVAQFRKKVDAVNKELKPLGHICQKKEKEYREALEAFNEKNK 120
           RLACIR+ELEAL DPMRKEVAQ RKK+DAVNKELKPLGH CQKKEKEY+EALEAFN+KNK
Sbjct: 73  RLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNK 132

Query: 121 EKVQLINKLMELVSESERLRLKKLEELSKNIDTIR 155
           EKVQLI KLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 133 EKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of Csor.00g096230 vs. ExPASy TrEMBL
Match: A0A5D3DPH8 (RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003590 PE=3 SV=1)

HSP 1 Score: 255 bits (651), Expect = 9.42e-85
Identity = 144/155 (92.90%), Postives = 150/155 (96.77%), Query Frame = 0


Query: 1   MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 60
           MVQN+TGSLSFSSHL KEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK
Sbjct: 13  MVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 72

Query: 61  RLACIRQELEALTDPMRKEVAQFRKKVDAVNKELKPLGHICQKKEKEYREALEAFNEKNK 120
           RLACIR+ELEAL DPMRKEVAQ RK++DAVNKELKPLGH CQKKEKEY+EALEAFN+KNK
Sbjct: 73  RLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNK 132

Query: 121 EKVQLINKLMELVSESERLRLKKLEELSKNIDTIR 155
           EKVQLI KLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 133 EKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of Csor.00g096230 vs. ExPASy TrEMBL
Match: A0A1S3B6L6 (RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103486581 PE=3 SV=1)

HSP 1 Score: 255 bits (651), Expect = 9.42e-85
Identity = 144/155 (92.90%), Postives = 150/155 (96.77%), Query Frame = 0


Query: 1   MVQNSTGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 60
           MVQN+TGSLSFSSHL KEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK
Sbjct: 13  MVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETK 72

Query: 61  RLACIRQELEALTDPMRKEVAQFRKKVDAVNKELKPLGHICQKKEKEYREALEAFNEKNK 120
           RLACIR+ELEAL DPMRKEVAQ RK++DAVNKELKPLGH CQKKEKEY+EALEAFN+KNK
Sbjct: 73  RLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNK 132

Query: 121 EKVQLINKLMELVSESERLRLKKLEELSKNIDTIR 155
           EKVQLI KLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 133 EKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of Csor.00g096230 vs. TAIR 10
Match: AT3G09980.1 (Family of unknown function (DUF662) )

HSP 1 Score: 219.2 bits (557), Expect = 2.4e-57
Identity = 118/149 (79.19%), Postives = 137/149 (91.95%), Query Frame = 0


Query: 6   TGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACI 65
           +GS+SFSS + KEDEE+SR+ALS FRAKEEEIE+KKME+RE+VQAQLGRVEEETKRLA I
Sbjct: 29  SGSMSFSSQMSKEDEEMSRTALSAFRAKEEEIEKKKMEIRERVQAQLGRVEEETKRLALI 88

Query: 66  RQELEALTDPMRKEVAQFRKKVDAVNKELKPLGHICQKKEKEYREALEAFNEKNKEKVQL 125
           R+ELE L DPMRKEVA  RKK+D+VNKELKPLGH  QKKE+EY+EALEAFNEKN+EKVQL
Sbjct: 89  REELEGLADPMRKEVAMVRKKIDSVNKELKPLGHTVQKKEREYKEALEAFNEKNREKVQL 148

Query: 126 INKLMELVSESERLRLKKLEELSKNIDTI 155
           I +LMELV ESE++R+KKLEELSKNID+I
Sbjct: 149 ITRLMELVGESEKMRMKKLEELSKNIDSI 177

[Close]

BLAST of Csor.00g096230 vs. TAIR 10
Match: AT2G36410.2 (Family of unknown function (DUF662) )

HSP 1 Score: 205.7 bits (522), Expect = 2.7e-53
Identity = 109/149 (73.15%), Postives = 136/149 (91.28%), Query Frame = 0


Query: 6   TGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACI 65
           TGSLSFSSH+ +EDEE++RSALS FRAKE+EIE+++MEVRE++QAQLGRVE+ETKRL+ I
Sbjct: 44  TGSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLSTI 103

Query: 66  RQELEALTDPMRKEVAQFRKKVDAVNKELKPLGHICQKKEKEYREALEAFNEKNKEKVQL 125
           R+ELE++ DPMRKEV+  RKK+D+VNKELKPLG   QKKE+EY+EAL+ FNEKN+EKVQL
Sbjct: 104 REELESMADPMRKEVSVVRKKIDSVNKELKPLGSTVQKKEREYKEALDTFNEKNREKVQL 163

Query: 126 INKLMELVSESERLRLKKLEELSKNIDTI 155
           I KLMELV ESE+LR+ KLEELSK+I+T+
Sbjct: 164 ITKLMELVGESEKLRMIKLEELSKSIETV 192

[Close]

BLAST of Csor.00g096230 vs. TAIR 10
Match: AT2G36410.3 (Family of unknown function (DUF662) )

HSP 1 Score: 201.8 bits (512), Expect = 3.9e-52
Identity = 108/149 (72.48%), Postives = 134/149 (89.93%), Query Frame = 0


Query: 6   TGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACI 65
           TGSLSFSSH+ +EDEE++RSALS FRAKE+EIE+++MEVRE++QAQLGRVE+ETKRL+ I
Sbjct: 44  TGSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLSTI 103

Query: 66  RQELEALTDPMRKEVAQFRKKVDAVNKELKPLGHICQKKEKEYREALEAFNEKNKEKVQL 125
           R+ELE++ DPMRKEV+  RKK+D+VNKELKPLG   QKK  EY+EAL+ FNEKN+EKVQL
Sbjct: 104 REELESMADPMRKEVSVVRKKIDSVNKELKPLGSTVQKKVMEYKEALDTFNEKNREKVQL 163

Query: 126 INKLMELVSESERLRLKKLEELSKNIDTI 155
           I KLMELV ESE+LR+ KLEELSK+I+T+
Sbjct: 164 ITKLMELVGESEKLRMIKLEELSKSIETV 192

[Close]

BLAST of Csor.00g096230 vs. TAIR 10
Match: AT3G52920.2 (Family of unknown function (DUF662) )

HSP 1 Score: 201.1 bits (510), Expect = 6.7e-52
Identity = 110/146 (75.34%), Postives = 131/146 (89.73%), Query Frame = 0


Query: 8   SLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIRQ 67
           SLSFSS + KEDEE++RSALS FRAKE+EIE++KMEVRE+V+AQLGRVEEET+RLA IR+
Sbjct: 17  SLSFSSQMSKEDEEMARSALSAFRAKEDEIEKRKMEVRERVKAQLGRVEEETRRLASIRE 76

Query: 68  ELEALTDPMRKEVAQFRKKVDAVNKELKPLGHICQKKEKEYREALEAFNEKNKEKVQLIN 127
           ELE + DPMRKEV   RKK+D+VNKELKPLG   QKKE+EY+EAL+ FNEKN+EKVQLI 
Sbjct: 77  ELETMADPMRKEVNWVRKKIDSVNKELKPLGSTVQKKEREYKEALDTFNEKNREKVQLIT 136

Query: 128 KLMELVSESERLRLKKLEELSKNIDT 154
           KLMELV ESE+LRLKKL+ELS++IDT
Sbjct: 137 KLMELVGESEKLRLKKLDELSRSIDT 162

[Close]

BLAST of Csor.00g096230 vs. TAIR 10
Match: AT2G36410.1 (Family of unknown function (DUF662) )

HSP 1 Score: 200.3 bits (508), Expect = 1.1e-51
Identity = 109/152 (71.71%), Postives = 136/152 (89.47%), Query Frame = 0


Query: 6   TGSLSFSSHLCKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACI 65
           TGSLSFSSH+ +EDEE++RSALS FRAKE+EIE+++MEVRE++QAQLGRVE+ETKRL+ I
Sbjct: 44  TGSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLSTI 103

Query: 66  RQELEALTDPMRKEVAQFRKKVDAVNKELKPLGHICQKKEKEYREALEAFNEKNKEKVQL 125
           R+ELE++ DPMRKEV+  RKK+D+VNKELKPLG   QKKE+EY+EAL+ FNEKN+EKVQL
Sbjct: 104 REELESMADPMRKEVSVVRKKIDSVNKELKPLGSTVQKKEREYKEALDTFNEKNREKVQL 163

Query: 126 INKLME---LVSESERLRLKKLEELSKNIDTI 155
           I KLME   LV ESE+LR+ KLEELSK+I+T+
Sbjct: 164 ITKLMEMEQLVGESEKLRMIKLEELSKSIETV 195

The following BLAST results are available for this feature:

BLAST of Csor.00g096230 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g096230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935581.1	4.40e-92	100.00	GRB10-interacting GYF protein 2-like [Cucurbita moschata] >XP_023526009.1 GRB10-...	[more]
XP_022983144.1	3.62e-91	99.35	GRB10-interacting GYF protein 2-like [Cucurbita maxima]	[more]
XP_004137876.1	6.79e-85	93.55	GRB10-interacting GYF protein 2 [Cucumis sativus] >KGN59071.1 hypothetical prote...	[more]
XP_038903091.1	6.79e-85	93.55	GRB10-interacting GYF protein 2-like [Benincasa hispida]	[more]
XP_008442808.1	1.94e-84	92.90	PREDICTED: uncharacterized protein LOC103486581 [Cucumis melo] >KAA0043908.1 put...	[more]

BLAST of Csor.00g096230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F531	2.13e-92	100.00	RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111442413 PE=3 SV=1	[more]
A0A6J1J6H3	1.75e-91	99.35	RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111481783 PE=3 SV=1	[more]
A0A0A0LGI7	3.29e-85	93.55	RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_3G751460 PE=3 SV=1	[more]
A0A5D3DPH8	9.42e-85	92.90	RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B6L6	9.42e-85	92.90	RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103486581 PE=3 SV=1	[more]

BLAST of Csor.00g096230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09980.1	2.4e-57	79.19	Family of unknown function (DUF662)	[more]
AT2G36410.2	2.7e-53	73.15	Family of unknown function (DUF662)	[more]
AT2G36410.3	3.9e-52	72.48	Family of unknown function (DUF662)	[more]
AT3G52920.2	6.7e-52	75.34	Family of unknown function (DUF662)	[more]
AT2G36410.1	1.1e-51	71.71	Family of unknown function (DUF662)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 101..135
None	No IPR available	COILS	Coil	Coil	coord: 27..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR21470:SF8	EXPRESSED PROTEIN	coord: 5..154
IPR007033	RAB6-interacting golgin	PFAM	PF04949	Transcrip_act	coord: 7..153 e-value: 1.6E-73 score: 245.7
IPR007033	RAB6-interacting golgin	PANTHER	PTHR21470	RAB6-INTERACTING PROTEIN GORAB	coord: 5..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g096230.m01	Csor.00g096230.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005794	Golgi apparatus