Csor.00g096150 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g096150
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Phytosulfokine-beta
Location	Csor_Chr14: 1226004 .. 1226453 (-)
RNA-Seq Expression	Csor.00g096150
Synteny	Csor.00g096150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCAGAGCTCCCATGGCTTCTTCTTCTTCTTCTTCTTCTCTTTTCTCTTCATTTTCCTTCTATTTTCCCAATCAGCCTCTGCCCGATTCCCAGCAGCCAAACAGGGTAAGACCCACATAAAAAAAATCCTTCCTTTTTGCTCTCTCTATATTTGATTTTCCCGGAAAATTTGCAGGTCTAGGGGAAACCCACGAGAAGCTCACCCATGGAGGGGTTCAAGCAGATTCATGGCCAGATTTCCCCCATGTAAATAAATAGCCTTAATTTAATTTATTTGTTGTTGTTCTACCAATTTTCTTGTTTGGATTTTAATGGCTTCTGATTTTGTTTTAAAGATAATTGGAGGAAGGGAGAAGGGAGAAGAAGAAGAAGAAGGATGGGAGAAGAGGAAGATGATGTTAGAAGCACACTTGGATTATGTTTACACACAGAATGTGGAGCATTGA

mRNA sequence

ATGAACCAGAGCTCCCATGGCTTCTTCTTCTTCTTCTTCTTCTCTTTTCTCTTCATTTTCCTTCTATTTTCCCAATCAGCCTCTGCCCGATTCCCAGCAGCCAAACAGGGTCTAGGGGAAACCCACGAGAAGCTCACCCATGGAGGGGTTCAAGCAGATTCATGGCCAGATTTCCCCCATATAATTGGAGGAAGGGAGAAGGGAGAAGAAGAAGAAGAAGGATGGGAGAAGAGGAAGATGATGTTAGAAGCACACTTGGATTATGTTTACACACAGAATGTGGAGCATTGA

Coding sequence (CDS)

ATGAACCAGAGCTCCCATGGCTTCTTCTTCTTCTTCTTCTTCTCTTTTCTCTTCATTTTCCTTCTATTTTCCCAATCAGCCTCTGCCCGATTCCCAGCAGCCAAACAGGGTCTAGGGGAAACCCACGAGAAGCTCACCCATGGAGGGGTTCAAGCAGATTCATGGCCAGATTTCCCCCATATAATTGGAGGAAGGGAGAAGGGAGAAGAAGAAGAAGAAGGATGGGAGAAGAGGAAGATGATGTTAGAAGCACACTTGGATTATGTTTACACACAGAATGTGGAGCATTGA

Protein sequence

MNQSSHGFFFFFFFSFLFIFLLFSQSASARFPAAKQGLGETHEKLTHGGVQADSWPDFPHIIGGREKGEEEEEGWEKRKMMLEAHLDYVYTQNVEH

Homology

[Close]

BLAST of Csor.00g096150 vs. NCBI nr
Match: KAG6580671.1 (hypothetical protein SDJN03_20673, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 196 bits (498), Expect = 3.60e-63
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MNQSSHGFFFFFFFSFLFIFLLFSQSASARFPAAKQGLGETHEKLTHGGVQADSWPDFPH 60
          MNQSSHGFFFFFFFSFLFIFLLFSQSASARFPAAKQGLGETHEKLTHGGVQADSWPDFPH
Sbjct: 1  MNQSSHGFFFFFFFSFLFIFLLFSQSASARFPAAKQGLGETHEKLTHGGVQADSWPDFPH 60

Query: 61 IIGGREKGEEEEEGWEKRKMMLEAHLDYVYTQNVEH 96
          IIGGREKGEEEEEGWEKRKMMLEAHLDYVYTQNVEH
Sbjct: 61 IIGGREKGEEEEEGWEKRKMMLEAHLDYVYTQNVEH 96

[Close]

BLAST of Csor.00g096150 vs. NCBI nr
Match: XP_022935155.1 (uncharacterized protein LOC111442110 [Cucurbita moschata])

HSP 1 Score: 194 bits (494), Expect = 1.47e-62
Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MNQSSHGFFFFFFFSFLFIFLLFSQSASARFPAAKQGLGETHEKLTHGGVQADSWPDFPH 60
          MNQSSHGFFFFFFFSFLFIFLLFSQSASARFPAAKQGLGETHEKLTHGGVQADSWPDFPH
Sbjct: 1  MNQSSHGFFFFFFFSFLFIFLLFSQSASARFPAAKQGLGETHEKLTHGGVQADSWPDFPH 60

Query: 61 IIGGREKGEEEEEGWEKRKMMLEAHLDYVYTQNVEH 96
          IIGGREKGEEEEEGWEKRKMMLEAHLDYVYTQNV+H
Sbjct: 61 IIGGREKGEEEEEGWEKRKMMLEAHLDYVYTQNVKH 96

[Close]

BLAST of Csor.00g096150 vs. NCBI nr
Match: XP_023528216.1 (putative phytosulfokines 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 187 bits (474), Expect = 1.65e-59
Identity = 92/96 (95.83%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 1  MNQSSHGFFFFFFFSFLFIFLLFSQSASARFPAAKQGLGETHEKLTHGGVQADSWPDFPH 60
          MNQSSHGFFFFFFFSFLFIFLLFSQSASARFPAAKQGLGETHEKLTHG VQADSW DFPH
Sbjct: 1  MNQSSHGFFFFFFFSFLFIFLLFSQSASARFPAAKQGLGETHEKLTHGVVQADSWADFPH 60

Query: 61 IIGGREKGEEEEEGWEKRKMMLEAHLDYVYTQNVEH 96
          +IGGREKGEEEEEGWEKRKMMLEAHLDYVYTQNV+H
Sbjct: 61 MIGGREKGEEEEEGWEKRKMMLEAHLDYVYTQNVKH 96

[Close]

BLAST of Csor.00g096150 vs. NCBI nr
Match: XP_022983167.1 (uncharacterized protein LOC111481800 [Cucurbita maxima])

HSP 1 Score: 176 bits (446), Expect = 3.10e-55
Identity = 91/97 (93.81%), Postives = 92/97 (94.85%), Query Frame = 0


Query: 1  MNQSSHGFFFFFFFSFLFIFLLFSQSASARFPAAKQGLGETHEKLTHGGVQADSWPDFPH 60
          MNQSSHGFFFF FFSFLFIFLLFSQS SARFPAAKQGLGETHEKLTHG VQADSW DFPH
Sbjct: 1  MNQSSHGFFFF-FFSFLFIFLLFSQSTSARFPAAKQGLGETHEKLTHGVVQADSWADFPH 60

Query: 61 IIGGREKGEEEEE-GWEKRKMMLEAHLDYVYTQNVEH 96
          IIGGREKGEEEEE GWEKRKMMLEAHLDYVYTQNV+H
Sbjct: 61 IIGGREKGEEEEEEGWEKRKMMLEAHLDYVYTQNVKH 96

[Close]

BLAST of Csor.00g096150 vs. NCBI nr
Match: XP_038906014.1 (uncharacterized protein LOC120091917 [Benincasa hispida])

HSP 1 Score: 151 bits (382), Expect = 2.51e-45
Identity = 79/104 (75.96%), Postives = 87/104 (83.65%), Query Frame = 0


Query: 1   MNQSSHGFFFFFFFSFLFIFLLFSQ-SASARFPAAKQGLGETHEKLTHGGVQADSWPDFP 60
           MNQ+SHGFFFFFF SFLFIFLLFS  SASARFP++KQG+ ETH+K++HG VQADSWPDFP
Sbjct: 1   MNQNSHGFFFFFFLSFLFIFLLFSSHSASARFPSSKQGIEETHKKISHGMVQADSWPDFP 60

Query: 61  HIIGGREKG----------EEEEEGWEKRKMMLEAHLDYVYTQN 93
           HI+GGREKG          EEEEE WEK KMMLEAHLDYVYTQN
Sbjct: 61  HIMGGREKGGGGGGGGEEEEEEEEEWEKGKMMLEAHLDYVYTQN 104

[Close]

BLAST of Csor.00g096150 vs. ExPASy TrEMBL
Match: A0A6J1F9T2 (Phytosulfokine-beta OS=Cucurbita moschata OX=3662 GN=LOC111442110 PE=3 SV=1)

HSP 1 Score: 194 bits (494), Expect = 7.11e-63
Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MNQSSHGFFFFFFFSFLFIFLLFSQSASARFPAAKQGLGETHEKLTHGGVQADSWPDFPH 60
          MNQSSHGFFFFFFFSFLFIFLLFSQSASARFPAAKQGLGETHEKLTHGGVQADSWPDFPH
Sbjct: 1  MNQSSHGFFFFFFFSFLFIFLLFSQSASARFPAAKQGLGETHEKLTHGGVQADSWPDFPH 60

Query: 61 IIGGREKGEEEEEGWEKRKMMLEAHLDYVYTQNVEH 96
          IIGGREKGEEEEEGWEKRKMMLEAHLDYVYTQNV+H
Sbjct: 61 IIGGREKGEEEEEGWEKRKMMLEAHLDYVYTQNVKH 96

[Close]

BLAST of Csor.00g096150 vs. ExPASy TrEMBL
Match: A0A6J1IYI6 (Phytosulfokine-beta OS=Cucurbita maxima OX=3661 GN=LOC111481800 PE=3 SV=1)

HSP 1 Score: 176 bits (446), Expect = 1.50e-55
Identity = 91/97 (93.81%), Postives = 92/97 (94.85%), Query Frame = 0


Query: 1  MNQSSHGFFFFFFFSFLFIFLLFSQSASARFPAAKQGLGETHEKLTHGGVQADSWPDFPH 60
          MNQSSHGFFFF FFSFLFIFLLFSQS SARFPAAKQGLGETHEKLTHG VQADSW DFPH
Sbjct: 1  MNQSSHGFFFF-FFSFLFIFLLFSQSTSARFPAAKQGLGETHEKLTHGVVQADSWADFPH 60

Query: 61 IIGGREKGEEEEE-GWEKRKMMLEAHLDYVYTQNVEH 96
          IIGGREKGEEEEE GWEKRKMMLEAHLDYVYTQNV+H
Sbjct: 61 IIGGREKGEEEEEEGWEKRKMMLEAHLDYVYTQNVKH 96

[Close]

BLAST of Csor.00g096150 vs. ExPASy TrEMBL
Match: A0A6J1KTY7 (Phytosulfokine-beta OS=Cucurbita maxima OX=3661 GN=LOC111498637 PE=3 SV=1)

HSP 1 Score: 123 bits (309), Expect = 9.74e-35
Identity = 68/93 (73.12%), Postives = 75/93 (80.65%), Query Frame = 0


Query: 1  MNQSSHGFFFFFFFSFLFIFLLFSQSASARFPAAKQGLGETHEKLTHGGVQADSWPDFPH 60
          MNQSSHGF  FF+F   FIFLL SQSA+ARF   KQG  ETH KL+HG +QADSWPDFP 
Sbjct: 1  MNQSSHGFSSFFYF---FIFLLLSQSATARFLPTKQGFEETHNKLSHGMIQADSWPDFPQ 60

Query: 61 IIGGREKGEEEEEGWEKRKMMLEAHLDYVYTQN 93
          II  RE+ EE+EE WEKR+MMLEAHLDYVYTQN
Sbjct: 61 II--REEEEEDEE-WEKRRMMLEAHLDYVYTQN 87

[Close]

BLAST of Csor.00g096150 vs. ExPASy TrEMBL
Match: A0A6J1FSF0 (Phytosulfokine-beta OS=Cucurbita moschata OX=3662 GN=LOC111447730 PE=3 SV=1)

HSP 1 Score: 118 bits (295), Expect = 1.11e-32
Identity = 62/93 (66.67%), Postives = 68/93 (73.12%), Query Frame = 0


Query: 1  MNQSSHGFFFFFFFSFLFIFLLFSQSASARFPAAKQGLGETHEKLTHGGVQADSWPDFPH 60
          MNQSSHG F        FIFLL SQSA+ARF   KQG  ETH KL+HG +Q DSWPDFP 
Sbjct: 1  MNQSSHGLF--------FIFLLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFPQ 60

Query: 61 IIGGREKGEEEEEGWEKRKMMLEAHLDYVYTQN 93
          II    + EEE+E WEKR+MMLEAHLDYVYTQN
Sbjct: 61 II----REEEEDEEWEKRRMMLEAHLDYVYTQN 81

[Close]

BLAST of Csor.00g096150 vs. ExPASy TrEMBL
Match: A0A1S4DUI1 (Phytosulfokine-beta OS=Cucumis melo OX=3656 GN=LOC107990603 PE=3 SV=1)

HSP 1 Score: 114 bits (286), Expect = 4.41e-30
Identity = 63/100 (63.00%), Postives = 77/100 (77.00%), Query Frame = 0


Query: 2   NQSSHGFFFFFFF-----SFLFIFLLFSQ-SASARFPAAKQGLGETHEKLTHGGV--QAD 61
           N++SHGFFFFFFF     SFLFI LLFS  SASARFP +K G+ ETH+K+++G +    D
Sbjct: 81  NRNSHGFFFFFFFFFFFISFLFILLLFSSHSASARFPPSKHGIEETHKKISYGSMVQSGD 140

Query: 62  SWPDFPHIIGGREKGEEEEEGWEKRKMMLEAHLDYVYTQN 93
           SWPDFPH+   +++ E EEE  EKRKMMLEAHLDYVYTQ+
Sbjct: 141 SWPDFPHVKREKDEEEVEEEEGEKRKMMLEAHLDYVYTQH 180

The following BLAST results are available for this feature:

BLAST of Csor.00g096150 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g096150 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6580671.1	3.60e-63	100.00	hypothetical protein SDJN03_20673, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022935155.1	1.47e-62	98.96	uncharacterized protein LOC111442110 [Cucurbita moschata]	[more]
XP_023528216.1	1.65e-59	95.83	putative phytosulfokines 6 [Cucurbita pepo subsp. pepo]	[more]
XP_022983167.1	3.10e-55	93.81	uncharacterized protein LOC111481800 [Cucurbita maxima]	[more]
XP_038906014.1	2.51e-45	75.96	uncharacterized protein LOC120091917 [Benincasa hispida]	[more]

BLAST of Csor.00g096150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F9T2	7.11e-63	98.96	Phytosulfokine-beta OS=Cucurbita moschata OX=3662 GN=LOC111442110 PE=3 SV=1	[more]
A0A6J1IYI6	1.50e-55	93.81	Phytosulfokine-beta OS=Cucurbita maxima OX=3661 GN=LOC111481800 PE=3 SV=1	[more]
A0A6J1KTY7	9.74e-35	73.12	Phytosulfokine-beta OS=Cucurbita maxima OX=3661 GN=LOC111498637 PE=3 SV=1	[more]
A0A6J1FSF0	1.11e-32	66.67	Phytosulfokine-beta OS=Cucurbita moschata OX=3662 GN=LOC111447730 PE=3 SV=1	[more]
A0A1S4DUI1	4.41e-30	63.00	Phytosulfokine-beta OS=Cucumis melo OX=3656 GN=LOC107990603 PE=3 SV=1	[more]

BLAST of Csor.00g096150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009438	Phytosulfokine	PFAM	PF06404	PSK	coord: 17..95 e-value: 9.8E-9 score: 36.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g096150.m01	Csor.00g096150.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
biological_process	GO:0008283	cell population proliferation
biological_process	GO:0007165	signal transduction
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane
molecular_function	GO:0008083	growth factor activity