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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. ATGGGCCTCCATTTAAGGGGAAATGGGCTTTCAGATAAGAGGCTCAGTCCAATAGGAAATGGGCTTCGAGATAAGCGGGCCCAGTCCAATATGAAATGGGCTTTCAGATATGTAGACGCTGTCCAACAGGAAATGGGCTTTAAGAGAAGGAGGCCCAGCCCAATAGGAAAGCACTGGAAATATCTGAAAACAAATAAATCAGCGAATTGTCAAAGGAAGAAAACGTGTAGAGCTTTGATTCGGCCTCGCAGCTATATCTATGAGACCGATTCATTTCTCTTGACCCAAAGGATTAGTTCCGTAAGATCCCAATTCCGCCACTATTTTCGACCTCATCCTCCCAAAATTATCCGATCCGCTTCCGCTGCCGCTGCAGCGCCGCTGATCTTTTGCAGCATGTTACGGATCAGATGA mRNA sequence ATGGGCCTCCATTTAAGGGGAAATGGGCTTTCAGATAAGAGGCTCAGTCCAATAGGAAATGGGCTTCGAGATAAGCGGGCCCAGTCCAATATGAAATGGGCTTTCAGATATGTAGACGCTGTCCAACAGGAAATGGGCTTTAAGAGAAGGAGGCCCAGCCCAATAGGAAAGCACTGGAAATATCTGAAAACAAATAAATCAGCGAATTGTCAAAGGAAGAAAACGTGTAGAGCTTTGATTCGGCCTCGCAGCTATATCTATGAGACCGATTCATTTCTCTTGACCCAAAGGATTAGTTCCGTAAGATCCCAATTCCGCCACTATTTTCGACCTCATCCTCCCAAAATTATCCGATCCGCTTCCGCTGCCGCTGCAGCGCCGCTGATCTTTTGCAGCATGTTACGGATCAGATGA Coding sequence (CDS) ATGGGCCTCCATTTAAGGGGAAATGGGCTTTCAGATAAGAGGCTCAGTCCAATAGGAAATGGGCTTCGAGATAAGCGGGCCCAGTCCAATATGAAATGGGCTTTCAGATATGTAGACGCTGTCCAACAGGAAATGGGCTTTAAGAGAAGGAGGCCCAGCCCAATAGGAAAGCACTGGAAATATCTGAAAACAAATAAATCAGCGAATTGTCAAAGGAAGAAAACGTGTAGAGCTTTGATTCGGCCTCGCAGCTATATCTATGAGACCGATTCATTTCTCTTGACCCAAAGGATTAGTTCCGTAAGATCCCAATTCCGCCACTATTTTCGACCTCATCCTCCCAAAATTATCCGATCCGCTTCCGCTGCCGCTGCAGCGCCGCTGATCTTTTGCAGCATGTTACGGATCAGATGA Protein sequence MGLHLRGNGLSDKRLSPIGNGLRDKRAQSNMKWAFRYVDAVQQEMGFKRRRPSPIGKHWKYLKTNKSANCQRKKTCRALIRPRSYIYETDSFLLTQRISSVRSQFRHYFRPHPPKIIRSASAAAAAPLIFCSMLRIR
Homology
BLAST of Csor.00g095070 vs. NCBI nr
Match: KAG6580563.1 (hypothetical protein SDJN03_20565, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 279 bits (713), Expect = 1.19e-94 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
Query: 1 MGLHLRGNGLSDKRLSPIGNGLRDKRAQSNMKWAFRYVDAVQQEMGFKRRRPSPIGKHWK 60
MGLHLRGNGLSDKRLSPIGNGLRDKRAQSNMKWAFRYVDAVQQEMGFKRRRPSPIGKHWK
Sbjct: 1 MGLHLRGNGLSDKRLSPIGNGLRDKRAQSNMKWAFRYVDAVQQEMGFKRRRPSPIGKHWK 60
Query: 61 YLKTNKSANCQRKKTCRALIRPRSYIYETDSFLLTQRISSVRSQFRHYFRPHPPKIIRSA 120
YLKTNKSANCQRKKTCRALIRPRSYIYETDSFLLTQRISSVRSQFRHYFRPHPPKIIRSA
Sbjct: 61 YLKTNKSANCQRKKTCRALIRPRSYIYETDSFLLTQRISSVRSQFRHYFRPHPPKIIRSA 120
Query: 121 SAAAAAPLIFCSMLRIR 137
SAAAAAPLIFCSMLRIR
Sbjct: 121 SAAAAAPLIFCSMLRIR 137
BLAST of Csor.00g095070 vs. NCBI nr
Match: KAG7017317.1 (hypothetical protein SDJN02_19180, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 258 bits (659), Expect = 2.58e-85 Identity = 125/128 (97.66%), Postives = 127/128 (99.22%), Query Frame = 0
Query: 7 GNGLSDKRLSPIGNGLRDKRAQSNMKWAFRYVDAVQQEMGFKRRRPSPIGKHWKYLKTNK 66
GNGLSDKRLSPIGNGLRDKRAQSNMKWAFRYVDAVQQEMGFKRRRPSPIGKHWKYLKTNK
Sbjct: 12 GNGLSDKRLSPIGNGLRDKRAQSNMKWAFRYVDAVQQEMGFKRRRPSPIGKHWKYLKTNK 71
Query: 67 SANCQRKKTCRALIRPRSYIYETDSFLLTQRISSVRSQFRHYFRPHPPKIIRSASAAAAA 126
SANCQRKKTCRALIRPRSYIYETDSFLLTQRISSVRSQFRHYFRPHPPKIIRSASAAAA
Sbjct: 72 SANCQRKKTCRALIRPRSYIYETDSFLLTQRISSVRSQFRHYFRPHPPKIIRSASAAAAT 131
Query: 127 PLIFCSML 134
PLIFCS++
Sbjct: 132 PLIFCSIM 139
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| KAG6580563.1 | 1.19e-94 | 100.00 | hypothetical protein SDJN03_20565, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAG7017317.1 | 2.58e-85 | 97.66 | hypothetical protein SDJN02_19180, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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Relationships
The following mRNA feature(s) are a part of this gene:
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