Csor.00g094780 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g094780
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	protein FAR-RED ELONGATED HYPOCOTYL 1
Location	Csor_Chr14: 594519 .. 596408 (+)
RNA-Seq Expression	Csor.00g094780
Synteny	Csor.00g094780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGTGATGGGATTGGGGGGAACGAACGAAGCAACTTTCTCGTGCCACCCACGTGAACTCCAAATGGACGTGTCTAATTCTGACTCGATGGTGCGCACCAGTAAGACCCAATTCCCCCAATTCTCTTGCCCATTTTTTTTCCCTTTTTCTGGGAATCGTTTGATGAAAAGATGGCAACAACAGGGACTATCCTGCGCGAGCTGCTCAGGCTTCTGTGACTCCAATTTCTCAGCGTTTTTTTCCTCCTCTCTTTCCAGTGTTGTTGGATTTCATTTCTGGGTTTGTGGGTTTGGATTTGTCTCTGCATCTGATCGATTTTATCGTCTTCGGGATTGAGATGGAGGAGAAGAAACAGAACCCAGCTGAGATCAACAGGTTTATCATCTGGGTTTTTAAGATTCTTGCTTCTAAACCACTTTTATCAGTTTTGGATTATGTTCCTTAAACTGTTCATCGAGTGTTTACTTTCACTTTCCTCTCTTCTTTTTTCCCTTTTCGTTTGATTTAGTGAAGATTTCAAGTAGGTCTGTTCTTTTGTTCGTCTAATTACTGAAATGGTGGATGGGGATCAAGATGGGGTTTAGGTTCTTTTCCATTTCTTAGTGTTTCGAGTATCGTTATTGTTGCTATTATTTACTCGGGAGATGAAGAACAATCTTGATCCGCGCTATACTAATTTAGGGAAGTCTGATTTCTTTTCCTTTTTTGAAGTTTCAATCGATTGATGGGGTCTGCGATTTTGCCTTACTGGTACAGATCAACTTATTACCGATTTTAATTACCTAGAATACACATTGAGAAATTAGACGACTGAAAACGAAATCCTACCAATTCTATGCGTTACCAGCTCCTTTTGGAAACAAATTCATGCTTATAATGTTCTAAGACATTGTTTTCATGTTTTGGTTGCTGGAACTCTTCTGTTAATCCAACTCTGTTGGTATATTTTCACTGAGAGTTTGAAGCATTATCTCTTGTAGTTCCTGTCTTGCATCCAAATTAATGGAGGATTGCAGCATTTTCCCTGTCTCTTATCTGAAGAATTATGTCGTTTTCTAATGTTTTTTTTGCAGCTTCTATGTAATTTCTAAGCTCCAGACCAACCCTTTTGACTTGAACAAGAAAAGAAAGCTACCGGCTGAGCATTTGGGCTTGCCTTCACCAAAACATAAACACTGCAATGAAGGCTTCCCTTCCAAGCTTGCCTTTCTGTATGATGGCTTTCCCGAAACCGAGCACATGAATGTACAACTCATAAAGGGGAGCGCGAATGTACTGCGTTTCGACGACGGGTCGAGTCCCGAATCGGCAAAAGATAGCAATAGCTTCTGCGAAGAGTCTGATTCTGCAACATCTGTATTTCATGGAGCCAAATTTGAACTGAACCAAGCTTGCACATATGACAGTTCTTCCACACAATGTATGAGTTTTGGTGGCGCAAGTTCTGAAAGCACCCATTTCTCAGTTGAAAGCTCCACAGCCATGGAATCGAGCTCGACCGAGCAGGAAGTAGCGTTTGCAAGCGGCGAAAATAGAATCGAAACAGTTCACAAAGTTCAGGAACATCTACTAGAACTGGATAGCCGTGAAGATTATGATTTTGCTGAATATGGACATGATGAAACTGAGCAATGCACAGACCAGGAACTTGAGGATCTTTTCTACTCAAACGGATTGGACCCAAATGCCTATATTCTTTCCTCCGGACGATGGACAGTAAACCACGGTAGTAAACACATCTTCCATAAGAATCTTTATCAGTTGAAGTTCATTGTTTGCCATTTACTAAATCACATTCATTCTCTTAATGCAGAGGCTCAATCAAGTGCTAGAGCCCCAACGATTGATCAAGAATTTGAGCAGTACTTTTCCATGCTGATGCTGTAA

mRNA sequence

ATGAGAGTGATGGGATTGGGGGGAACGAACGAAGCAACTTTCTCGTGCCACCCACGTGAACTCCAAATGGACGTGTCTAATTCTGACTCGATGGTGCGCACCAATGGCAACAACAGGGACTATCCTGCGCGAGCTGCTCAGGCTTCTGTGACTCCAATTTCTCAGCGTTTTTTTCCTCCTCTCTTTCCAGTGTTGTTGGATTTCATTTCTGGGTTTGTGGGTTTGGATTTGTCTCTGCATCTGATCGATTTTATCGTCTTCGGGATTGAGATGGAGGAGAAGAAACAGAACCCAGCTGAGATCAACAGCTTCTATGTAATTTCTAAGCTCCAGACCAACCCTTTTGACTTGAACAAGAAAAGAAAGCTACCGGCTGAGCATTTGGGCTTGCCTTCACCAAAACATAAACACTGCAATGAAGGCTTCCCTTCCAAGCTTGCCTTTCTGTATGATGGCTTTCCCGAAACCGAGCACATGAATGTACAACTCATAAAGGGGAGCGCGAATGTACTGCGTTTCGACGACGGGTCGAGTCCCGAATCGGCAAAAGATAGCAATAGCTTCTGCGAAGAGTCTGATTCTGCAACATCTGTATTTCATGGAGCCAAATTTGAACTGAACCAAGCTTGCACATATGACAGTTCTTCCACACAATGTATGAGTTTTGGTGGCGCAAGTTCTGAAAGCACCCATTTCTCAGTTGAAAGCTCCACAGCCATGGAATCGAGCTCGACCGAGCAGGAAGTAGCGTTTGCAAGCGGCGAAAATAGAATCGAAACAGTTCACAAAGTTCAGGAACATCTACTAGAACTGGATAGCCGTGAAGATTATGATTTTGCTGAATATGGACATGATGAAACTGAGCAATGCACAGACCAGGAACTTGAGGATCTTTTCTACTCAAACGGATTGGACCCAAATGCCTATATTCTTTCCTCCGGACGATGGACAGTAAACCACGAGGCTCAATCAAGTGCTAGAGCCCCAACGATTGATCAAGAATTTGAGCAGTACTTTTCCATGCTGATGCTGTAA

Coding sequence (CDS)

ATGAGAGTGATGGGATTGGGGGGAACGAACGAAGCAACTTTCTCGTGCCACCCACGTGAACTCCAAATGGACGTGTCTAATTCTGACTCGATGGTGCGCACCAATGGCAACAACAGGGACTATCCTGCGCGAGCTGCTCAGGCTTCTGTGACTCCAATTTCTCAGCGTTTTTTTCCTCCTCTCTTTCCAGTGTTGTTGGATTTCATTTCTGGGTTTGTGGGTTTGGATTTGTCTCTGCATCTGATCGATTTTATCGTCTTCGGGATTGAGATGGAGGAGAAGAAACAGAACCCAGCTGAGATCAACAGCTTCTATGTAATTTCTAAGCTCCAGACCAACCCTTTTGACTTGAACAAGAAAAGAAAGCTACCGGCTGAGCATTTGGGCTTGCCTTCACCAAAACATAAACACTGCAATGAAGGCTTCCCTTCCAAGCTTGCCTTTCTGTATGATGGCTTTCCCGAAACCGAGCACATGAATGTACAACTCATAAAGGGGAGCGCGAATGTACTGCGTTTCGACGACGGGTCGAGTCCCGAATCGGCAAAAGATAGCAATAGCTTCTGCGAAGAGTCTGATTCTGCAACATCTGTATTTCATGGAGCCAAATTTGAACTGAACCAAGCTTGCACATATGACAGTTCTTCCACACAATGTATGAGTTTTGGTGGCGCAAGTTCTGAAAGCACCCATTTCTCAGTTGAAAGCTCCACAGCCATGGAATCGAGCTCGACCGAGCAGGAAGTAGCGTTTGCAAGCGGCGAAAATAGAATCGAAACAGTTCACAAAGTTCAGGAACATCTACTAGAACTGGATAGCCGTGAAGATTATGATTTTGCTGAATATGGACATGATGAAACTGAGCAATGCACAGACCAGGAACTTGAGGATCTTTTCTACTCAAACGGATTGGACCCAAATGCCTATATTCTTTCCTCCGGACGATGGACAGTAAACCACGAGGCTCAATCAAGTGCTAGAGCCCCAACGATTGATCAAGAATTTGAGCAGTACTTTTCCATGCTGATGCTGTAA

Protein sequence

MRVMGLGGTNEATFSCHPRELQMDVSNSDSMVRTNGNNRDYPARAAQASVTPISQRFFPPLFPVLLDFISGFVGLDLSLHLIDFIVFGIEMEEKKQNPAEINSFYVISKLQTNPFDLNKKRKLPAEHLGLPSPKHKHCNEGFPSKLAFLYDGFPETEHMNVQLIKGSANVLRFDDGSSPESAKDSNSFCEESDSATSVFHGAKFELNQACTYDSSSTQCMSFGGASSESTHFSVESSTAMESSSTEQEVAFASGENRIETVHKVQEHLLELDSREDYDFAEYGHDETEQCTDQELEDLFYSNGLDPNAYILSSGRWTVNHEAQSSARAPTIDQEFEQYFSMLML

Homology

[Close]

BLAST of Csor.00g094780 vs. ExPASy Swiss-Prot
Match: Q8S4Q6 (Protein FAR-RED ELONGATED HYPOCOTYL 1 OS=Arabidopsis thaliana OX=3702 GN=FHY1 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 6.0e-05
Identity = 59/211 (27.96%), Postives = 96/211 (45.50%), Query Frame = 0


Query: 155 ETEHMNVQLIKGSANVLRFDDGSSPESAKDSNSFCEESDSATSVFHGAKFELNQACTYDS 214
           E    +  +I  S NVL+ ++    +  K      +E        H      N AC+ ++
Sbjct: 15  EINSFHHMIISSSKNVLKMEEVEVSKKRKFQTDQSDELSLLPLSKHTC--FANVACSENT 74

Query: 215 SSTQCMSFGGASSESTHFS----VESSTAMESSS---TEQEVAFASGENRIETVHKVQEH 274
           +        G S   T +S    V S+T+ME ++    ++E + + GE++          
Sbjct: 75  N--------GNSEIDTEYSMSSYVNSTTSMECNNDIEMKEESSGSCGEDK---------- 134

Query: 275 LLELDSREDYDFAEYGHDETEQCTDQELEDLFY----------SNGLDPNA--YILSSGR 334
           ++  +S  DY    YG    E  +++ +E++ Y          + G   NA  ++LSSGR
Sbjct: 135 MISFESHLDY---IYGTQNLEDFSEKVIENILYLDEQEEEEEDAKGCSSNAAKFVLSSGR 194

Query: 335 WTVNHEAQS--SARAPTIDQEFEQYFSMLML 345
           WTVN +  +    + PTIDQEFEQYFS LML
Sbjct: 195 WTVNQDDSTLHETKKPTIDQEFEQYFSTLML 202

[Close]

BLAST of Csor.00g094780 vs. NCBI nr
Match: KAG6580534.1 (Protein FAR-RED ELONGATED HYPOCOTYL 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 682 bits (1760), Expect = 2.25e-247
Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0


Query: 1   MRVMGLGGTNEATFSCHPRELQMDVSNSDSMVRTNGNNRDYPARAAQASVTPISQRFFPP 60
           MRVMGLGGTNEATFSCHPRELQMDVSNSDSMVRTNGNNRDYPARAAQASVTPISQRFFPP
Sbjct: 1   MRVMGLGGTNEATFSCHPRELQMDVSNSDSMVRTNGNNRDYPARAAQASVTPISQRFFPP 60

Query: 61  LFPVLLDFISGFVGLDLSLHLIDFIVFGIEMEEKKQNPAEINSFYVISKLQTNPFDLNKK 120
           LFPVLLDFISGFVGLDLSLHLIDFIVFGIEMEEKKQNPAEINSFYVISKLQTNPFDLNKK
Sbjct: 61  LFPVLLDFISGFVGLDLSLHLIDFIVFGIEMEEKKQNPAEINSFYVISKLQTNPFDLNKK 120

Query: 121 RKLPAEHLGLPSPKHKHCNEGFPSKLAFLYDGFPETEHMNVQLIKGSANVLRFDDGSSPE 180
           RKLPAEHLGLPSPKHKHCNEGFPSKLAFLYDGFPETEHMNVQLIKGSANVLRFDDGSSPE
Sbjct: 121 RKLPAEHLGLPSPKHKHCNEGFPSKLAFLYDGFPETEHMNVQLIKGSANVLRFDDGSSPE 180

Query: 181 SAKDSNSFCEESDSATSVFHGAKFELNQACTYDSSSTQCMSFGGASSESTHFSVESSTAM 240
           SAKDSNSFCEESDSATSVFHGAKFELNQACTYDSSSTQCMSFGGASSESTHFSVESSTAM
Sbjct: 181 SAKDSNSFCEESDSATSVFHGAKFELNQACTYDSSSTQCMSFGGASSESTHFSVESSTAM 240

Query: 241 ESSSTEQEVAFASGENRIETVHKVQEHLLELDSREDYDFAEYGHDETEQCTDQELEDLFY 300
           ESSSTEQEVAFASGENRIETVHKVQEHLLELDSREDYDFAEYGHDETEQCTDQELEDLFY
Sbjct: 241 ESSSTEQEVAFASGENRIETVHKVQEHLLELDSREDYDFAEYGHDETEQCTDQELEDLFY 300

Query: 301 SNGLDPNAYILSSGRWTVNHEAQSSARAPTIDQEFEQYFSMLML 344
           SNGLDPNAYILSSGRWTVNHEAQSSARAPTIDQEFEQYFSMLML
Sbjct: 301 SNGLDPNAYILSSGRWTVNHEAQSSARAPTIDQEFEQYFSMLML 344

[Close]

BLAST of Csor.00g094780 vs. NCBI nr
Match: XP_022934853.1 (uncharacterized protein LOC111441892 [Cucurbita moschata] >KAG7017286.1 Protein FAR-RED ELONGATED HYPOCOTYL 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 503 bits (1295), Expect = 5.78e-178
Identity = 253/254 (99.61%), Postives = 253/254 (99.61%), Query Frame = 0


Query: 91  MEEKKQNPAEINSFYVISKLQTNPFDLNKKRKLPAEHLGLPSPKHKHCNEGFPSKLAFLY 150
           MEEKKQNPAEINSFYVISKLQTNPFDLNKKRKLPAEHLGLPSPKHKHCNEGFPSKLAFLY
Sbjct: 1   MEEKKQNPAEINSFYVISKLQTNPFDLNKKRKLPAEHLGLPSPKHKHCNEGFPSKLAFLY 60

Query: 151 DGFPETEHMNVQLIKGSANVLRFDDGSSPESAKDSNSFCEESDSATSVFHGAKFELNQAC 210
           DGFPETEHMNVQ IKGSANVLRFDDGSSPESAKDSNSFCEESDSATSVFHGAKFELNQAC
Sbjct: 61  DGFPETEHMNVQFIKGSANVLRFDDGSSPESAKDSNSFCEESDSATSVFHGAKFELNQAC 120

Query: 211 TYDSSSTQCMSFGGASSESTHFSVESSTAMESSSTEQEVAFASGENRIETVHKVQEHLLE 270
           TYDSSSTQCMSFGGASSESTHFSVESSTAMESSSTEQEVAFASGENRIETVHKVQEHLLE
Sbjct: 121 TYDSSSTQCMSFGGASSESTHFSVESSTAMESSSTEQEVAFASGENRIETVHKVQEHLLE 180

Query: 271 LDSREDYDFAEYGHDETEQCTDQELEDLFYSNGLDPNAYILSSGRWTVNHEAQSSARAPT 330
           LDSREDYDFAEYGHDETEQCTDQELEDLFYSNGLDPNAYILSSGRWTVNHEAQSSARAPT
Sbjct: 181 LDSREDYDFAEYGHDETEQCTDQELEDLFYSNGLDPNAYILSSGRWTVNHEAQSSARAPT 240

Query: 331 IDQEFEQYFSMLML 344
           IDQEFEQYFSMLML
Sbjct: 241 IDQEFEQYFSMLML 254

[Close]

BLAST of Csor.00g094780 vs. NCBI nr
Match: XP_023528627.1 (protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE [Cucurbita pepo subsp. pepo])

HSP 1 Score: 498 bits (1281), Expect = 7.83e-176
Identity = 250/254 (98.43%), Postives = 252/254 (99.21%), Query Frame = 0


Query: 91  MEEKKQNPAEINSFYVISKLQTNPFDLNKKRKLPAEHLGLPSPKHKHCNEGFPSKLAFLY 150
           MEEKKQNPAEINSFYVISKLQTNPFDLNKKRKLPAEHLGLPSPKHKHCNEGFPSKLAFLY
Sbjct: 1   MEEKKQNPAEINSFYVISKLQTNPFDLNKKRKLPAEHLGLPSPKHKHCNEGFPSKLAFLY 60

Query: 151 DGFPETEHMNVQLIKGSANVLRFDDGSSPESAKDSNSFCEESDSATSVFHGAKFELNQAC 210
           +G PETEHMNVQ IKGSANVLRFDDGSSPESAKDSNSFCEESDSATSVFHGAKFELNQAC
Sbjct: 61  NGLPETEHMNVQFIKGSANVLRFDDGSSPESAKDSNSFCEESDSATSVFHGAKFELNQAC 120

Query: 211 TYDSSSTQCMSFGGASSESTHFSVESSTAMESSSTEQEVAFASGENRIETVHKVQEHLLE 270
           TYDSSSTQCMSFGGASSE+THFSVESSTAMESSSTEQEVAFASGENRIETVHKVQEHLLE
Sbjct: 121 TYDSSSTQCMSFGGASSENTHFSVESSTAMESSSTEQEVAFASGENRIETVHKVQEHLLE 180

Query: 271 LDSREDYDFAEYGHDETEQCTDQELEDLFYSNGLDPNAYILSSGRWTVNHEAQSSARAPT 330
           LDSREDYDFAEYGHDETEQCTDQELEDLFYSNGLDPNAYILSSGRWTVNHEAQSSARAPT
Sbjct: 181 LDSREDYDFAEYGHDETEQCTDQELEDLFYSNGLDPNAYILSSGRWTVNHEAQSSARAPT 240

Query: 331 IDQEFEQYFSMLML 344
           IDQEFEQYFSMLML
Sbjct: 241 IDQEFEQYFSMLML 254

[Close]

BLAST of Csor.00g094780 vs. NCBI nr
Match: XP_022983598.1 (protein FAR-RED ELONGATED HYPOCOTYL 1 [Cucurbita maxima])

HSP 1 Score: 477 bits (1227), Expect = 1.26e-167
Identity = 242/252 (96.03%), Postives = 245/252 (97.22%), Query Frame = 0


Query: 93  EKKQNPAEINSFYVISKLQTNPFDLNKKRKLPAEHLGLPSPKHKHCNEGFPSKLAFLYDG 152
           EK QNPAEINSFYVISKLQTNPFDLNKKRKLPAEHLGLPS KHKHCNEGFPSKLAFLY+G
Sbjct: 2   EKNQNPAEINSFYVISKLQTNPFDLNKKRKLPAEHLGLPSSKHKHCNEGFPSKLAFLYNG 61

Query: 153 FPETEHMNVQLIKGSANVLRFDDGSSPESAKDSNSFCEESDSATSVFHGAKFELNQACTY 212
            PETEHMNVQ IKGSANVLRFDDGSSPESAKDSNSFCEESDSATSVFHGAKFELNQACTY
Sbjct: 62  LPETEHMNVQFIKGSANVLRFDDGSSPESAKDSNSFCEESDSATSVFHGAKFELNQACTY 121

Query: 213 DSSSTQCMSFGGASSESTHFSVESSTAMESSSTEQEVAFASGENRIETVHKVQEHLLELD 272
           DSSSTQCMSFGGASS ST+FSVESSTAMESSSTEQEVAFASGENRIETVHKVQEHLLELD
Sbjct: 122 DSSSTQCMSFGGASSGSTNFSVESSTAMESSSTEQEVAFASGENRIETVHKVQEHLLELD 181

Query: 273 SREDYDFAEYGHDETEQCTDQELEDLFYSNGLDPNAYILSSGRWTVNHEAQSSARAPTID 332
           SRE YDFAEYGHDETEQCTDQELEDLFYSNGLDPNAYILSSGRWTVN+E QSSARAPTID
Sbjct: 182 SREGYDFAEYGHDETEQCTDQELEDLFYSNGLDPNAYILSSGRWTVNNEDQSSARAPTID 241

Query: 333 QEFEQYFSMLML 344
           QEFEQYFSMLML
Sbjct: 242 QEFEQYFSMLML 253

[Close]

BLAST of Csor.00g094780 vs. NCBI nr
Match: XP_004137783.2 (protein FAR-RED ELONGATED HYPOCOTYL 1 [Cucumis sativus] >KGN58861.1 hypothetical protein Csa_002447 [Cucumis sativus])

HSP 1 Score: 430 bits (1106), Expect = 9.40e-148
Identity = 242/361 (67.04%), Postives = 270/361 (74.79%), Query Frame = 0


Query: 4   MGLGGT--NEATFSCHPRELQMDVSNSDSMVRTNGNNRDYPARAAQASVTPISQRFFPPL 63
           M LG T  NEAT SCHPRE +MDVS S S+V T               V PI   F P  
Sbjct: 1   MRLGRTTMNEATSSCHPREPEMDVSQSHSLVPT--------------IVNPIPPTFVPHF 60

Query: 64  F------------PVLLDFISGFVGLD--LSLHLIDFI--VFGIEMEEKKQNPAEINSFY 123
                        P  +     F+GL   + +   D+   + G  MEEK+QNPAEINSFY
Sbjct: 61  LLFFWVSFHLKAHPNRIILWISFLGLGAWICVSASDWFSRLLGFRMEEKEQNPAEINSFY 120

Query: 124 VISKLQTNPFDLNKKRKLPAEHLGLPSPKHKHCNEGFPSKLAFLYDGFPETEHMNVQLIK 183
           VISKL++NPFDLNKKRKLPAEHLGLPSPKHKHC+E F SK AFLY G PETEHMNVQ IK
Sbjct: 121 VISKLRSNPFDLNKKRKLPAEHLGLPSPKHKHCSEEFASKSAFLYGGLPETEHMNVQFIK 180

Query: 184 GSANVLRFDDGSSPESAKDSNSFCEESDSATSVFHGAKFELNQA--CTYDSSSTQCMSFG 243
            +ANVL FD+ S PES KDSNS  EESDSATSVFHGAKFELNQA  CT+D+S+T+ MSFG
Sbjct: 181 ENANVLCFDEVSRPESVKDSNSLSEESDSATSVFHGAKFELNQAITCTHDTSTTRSMSFG 240

Query: 244 GASSESTHFSVESSTAMESSSTEQEVAFASGENRIETVHKVQEHLLELDSREDYDFAEYG 303
           GASSES HFSVESSTAMESSSTEQE AF SGENR+ET+ K+QE LLELDS EDY+ AEY 
Sbjct: 241 GASSESIHFSVESSTAMESSSTEQETAFPSGENRMETIQKLQEQLLELDSHEDYNCAEYE 300

Query: 304 HDETEQCTDQELEDLFYSNGLDPNAYILSSGRWTVNHEAQSSARAPTIDQEFEQYFSMLM 344
           +D+T+QCTDQELE+LFYSNGL+PN YILSSGRW +NHEAQS ARAPTIDQEFEQYFSMLM
Sbjct: 301 NDDTKQCTDQELEELFYSNGLNPNTYILSSGRWAINHEAQSRARAPTIDQEFEQYFSMLM 347

[Close]

BLAST of Csor.00g094780 vs. ExPASy TrEMBL
Match: A0A6J1F8W9 (uncharacterized protein LOC111441892 OS=Cucurbita moschata OX=3662 GN=LOC111441892 PE=4 SV=1)

HSP 1 Score: 503 bits (1295), Expect = 2.80e-178
Identity = 253/254 (99.61%), Postives = 253/254 (99.61%), Query Frame = 0


Query: 91  MEEKKQNPAEINSFYVISKLQTNPFDLNKKRKLPAEHLGLPSPKHKHCNEGFPSKLAFLY 150
           MEEKKQNPAEINSFYVISKLQTNPFDLNKKRKLPAEHLGLPSPKHKHCNEGFPSKLAFLY
Sbjct: 1   MEEKKQNPAEINSFYVISKLQTNPFDLNKKRKLPAEHLGLPSPKHKHCNEGFPSKLAFLY 60

Query: 151 DGFPETEHMNVQLIKGSANVLRFDDGSSPESAKDSNSFCEESDSATSVFHGAKFELNQAC 210
           DGFPETEHMNVQ IKGSANVLRFDDGSSPESAKDSNSFCEESDSATSVFHGAKFELNQAC
Sbjct: 61  DGFPETEHMNVQFIKGSANVLRFDDGSSPESAKDSNSFCEESDSATSVFHGAKFELNQAC 120

Query: 211 TYDSSSTQCMSFGGASSESTHFSVESSTAMESSSTEQEVAFASGENRIETVHKVQEHLLE 270
           TYDSSSTQCMSFGGASSESTHFSVESSTAMESSSTEQEVAFASGENRIETVHKVQEHLLE
Sbjct: 121 TYDSSSTQCMSFGGASSESTHFSVESSTAMESSSTEQEVAFASGENRIETVHKVQEHLLE 180

Query: 271 LDSREDYDFAEYGHDETEQCTDQELEDLFYSNGLDPNAYILSSGRWTVNHEAQSSARAPT 330
           LDSREDYDFAEYGHDETEQCTDQELEDLFYSNGLDPNAYILSSGRWTVNHEAQSSARAPT
Sbjct: 181 LDSREDYDFAEYGHDETEQCTDQELEDLFYSNGLDPNAYILSSGRWTVNHEAQSSARAPT 240

Query: 331 IDQEFEQYFSMLML 344
           IDQEFEQYFSMLML
Sbjct: 241 IDQEFEQYFSMLML 254

[Close]

BLAST of Csor.00g094780 vs. ExPASy TrEMBL
Match: A0A6J1J862 (protein FAR-RED ELONGATED HYPOCOTYL 1 OS=Cucurbita maxima OX=3661 GN=LOC111482155 PE=4 SV=1)

HSP 1 Score: 477 bits (1227), Expect = 6.12e-168
Identity = 242/252 (96.03%), Postives = 245/252 (97.22%), Query Frame = 0


Query: 93  EKKQNPAEINSFYVISKLQTNPFDLNKKRKLPAEHLGLPSPKHKHCNEGFPSKLAFLYDG 152
           EK QNPAEINSFYVISKLQTNPFDLNKKRKLPAEHLGLPS KHKHCNEGFPSKLAFLY+G
Sbjct: 2   EKNQNPAEINSFYVISKLQTNPFDLNKKRKLPAEHLGLPSSKHKHCNEGFPSKLAFLYNG 61

Query: 153 FPETEHMNVQLIKGSANVLRFDDGSSPESAKDSNSFCEESDSATSVFHGAKFELNQACTY 212
            PETEHMNVQ IKGSANVLRFDDGSSPESAKDSNSFCEESDSATSVFHGAKFELNQACTY
Sbjct: 62  LPETEHMNVQFIKGSANVLRFDDGSSPESAKDSNSFCEESDSATSVFHGAKFELNQACTY 121

Query: 213 DSSSTQCMSFGGASSESTHFSVESSTAMESSSTEQEVAFASGENRIETVHKVQEHLLELD 272
           DSSSTQCMSFGGASS ST+FSVESSTAMESSSTEQEVAFASGENRIETVHKVQEHLLELD
Sbjct: 122 DSSSTQCMSFGGASSGSTNFSVESSTAMESSSTEQEVAFASGENRIETVHKVQEHLLELD 181

Query: 273 SREDYDFAEYGHDETEQCTDQELEDLFYSNGLDPNAYILSSGRWTVNHEAQSSARAPTID 332
           SRE YDFAEYGHDETEQCTDQELEDLFYSNGLDPNAYILSSGRWTVN+E QSSARAPTID
Sbjct: 182 SREGYDFAEYGHDETEQCTDQELEDLFYSNGLDPNAYILSSGRWTVNNEDQSSARAPTID 241

Query: 333 QEFEQYFSMLML 344
           QEFEQYFSMLML
Sbjct: 242 QEFEQYFSMLML 253

[Close]

BLAST of Csor.00g094780 vs. ExPASy TrEMBL
Match: A0A0A0LFJ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734140 PE=4 SV=1)

HSP 1 Score: 430 bits (1106), Expect = 4.55e-148
Identity = 242/361 (67.04%), Postives = 270/361 (74.79%), Query Frame = 0


Query: 4   MGLGGT--NEATFSCHPRELQMDVSNSDSMVRTNGNNRDYPARAAQASVTPISQRFFPPL 63
           M LG T  NEAT SCHPRE +MDVS S S+V T               V PI   F P  
Sbjct: 1   MRLGRTTMNEATSSCHPREPEMDVSQSHSLVPT--------------IVNPIPPTFVPHF 60

Query: 64  F------------PVLLDFISGFVGLD--LSLHLIDFI--VFGIEMEEKKQNPAEINSFY 123
                        P  +     F+GL   + +   D+   + G  MEEK+QNPAEINSFY
Sbjct: 61  LLFFWVSFHLKAHPNRIILWISFLGLGAWICVSASDWFSRLLGFRMEEKEQNPAEINSFY 120

Query: 124 VISKLQTNPFDLNKKRKLPAEHLGLPSPKHKHCNEGFPSKLAFLYDGFPETEHMNVQLIK 183
           VISKL++NPFDLNKKRKLPAEHLGLPSPKHKHC+E F SK AFLY G PETEHMNVQ IK
Sbjct: 121 VISKLRSNPFDLNKKRKLPAEHLGLPSPKHKHCSEEFASKSAFLYGGLPETEHMNVQFIK 180

Query: 184 GSANVLRFDDGSSPESAKDSNSFCEESDSATSVFHGAKFELNQA--CTYDSSSTQCMSFG 243
            +ANVL FD+ S PES KDSNS  EESDSATSVFHGAKFELNQA  CT+D+S+T+ MSFG
Sbjct: 181 ENANVLCFDEVSRPESVKDSNSLSEESDSATSVFHGAKFELNQAITCTHDTSTTRSMSFG 240

Query: 244 GASSESTHFSVESSTAMESSSTEQEVAFASGENRIETVHKVQEHLLELDSREDYDFAEYG 303
           GASSES HFSVESSTAMESSSTEQE AF SGENR+ET+ K+QE LLELDS EDY+ AEY 
Sbjct: 241 GASSESIHFSVESSTAMESSSTEQETAFPSGENRMETIQKLQEQLLELDSHEDYNCAEYE 300

Query: 304 HDETEQCTDQELEDLFYSNGLDPNAYILSSGRWTVNHEAQSSARAPTIDQEFEQYFSMLM 344
           +D+T+QCTDQELE+LFYSNGL+PN YILSSGRW +NHEAQS ARAPTIDQEFEQYFSMLM
Sbjct: 301 NDDTKQCTDQELEELFYSNGLNPNTYILSSGRWAINHEAQSRARAPTIDQEFEQYFSMLM 347

[Close]

BLAST of Csor.00g094780 vs. ExPASy TrEMBL
Match: A0A5A7TMJ2 (Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001600 PE=4 SV=1)

HSP 1 Score: 421 bits (1083), Expect = 4.95e-145
Identity = 236/336 (70.24%), Postives = 256/336 (76.19%), Query Frame = 0


Query: 11  EATFSCHPRELQMDVSNSDSMVRTNGNNRDYPARAAQASVTPISQRFFPPLFPVLLDFIS 70
           EAT SC PRE +MDVS S S+  T  N              PI   F  P  P LL  IS
Sbjct: 3   EATSSCLPREPEMDVSQSHSLAPTIDN--------------PIPPTFVSPFSPFLLGLIS 62

Query: 71  GFVGLDLSLHLIDFIVFGIEMEEKKQNPAEINSFYVISKLQTNPFDLNKKRKLPAEHLGL 130
            F       +  DF+ F   MEE   NP EINSFY+ISKL  NP+DLNKKRKLPAEHLGL
Sbjct: 63  -FENTPTKDYPPDFLSF-FTMEE---NPTEINSFYIISKL--NPYDLNKKRKLPAEHLGL 122

Query: 131 PSPKHKHCNEGFPSKLAFLYDGFPETEHMNVQLIKGSANVLRFDDGSSPESAKDSNSFCE 190
           PSPKHKHC+EGF SK AFLY G PET HMNVQ IK +ANVL FD+GS PES KDSNS  E
Sbjct: 123 PSPKHKHCSEGFASKSAFLYGGLPETGHMNVQFIKENANVLCFDEGSRPESVKDSNSLSE 182

Query: 191 ESDSATSVFHGAKFELNQA--CTYDSSSTQCMSFGGASSESTHFSVESSTAMESSSTEQE 250
           ESDSATSVFHGAKFELNQA  CT+D+S+TQ MSFGGASSESTHFSVESSTAME  STEQE
Sbjct: 183 ESDSATSVFHGAKFELNQAITCTHDTSTTQSMSFGGASSESTHFSVESSTAMELISTEQE 242

Query: 251 VAFASGENRIETVHKVQEHLLELDSREDYDFAEYGHDETEQCTDQELEDLFYSNGLDPNA 310
            AF SGENRIET+HK+QEHLLELD  EDYD AEY + +T+QCTDQELE+LFYSNGL+PN 
Sbjct: 243 TAFPSGENRIETIHKLQEHLLELDGHEDYDCAEYENGDTKQCTDQELEELFYSNGLNPNT 302

Query: 311 YILSSGRWTVNHEAQSSARAPTIDQEFEQYFSMLML 344
           YILSSGRW +NHEAQS ARAPTIDQEFEQYFSMLML
Sbjct: 303 YILSSGRWAINHEAQSRARAPTIDQEFEQYFSMLML 317

[Close]

BLAST of Csor.00g094780 vs. ExPASy TrEMBL
Match: A0A1S3B5W9 (uncharacterized protein LOC103486380 OS=Cucumis melo OX=3656 GN=LOC103486380 PE=4 SV=1)

HSP 1 Score: 397 bits (1021), Expect = 1.27e-136
Identity = 204/252 (80.95%), Postives = 222/252 (88.10%), Query Frame = 0


Query: 95  KQNPAEINSFYVISKLQTNPFDLNKKRKLPAEHLGLPSPKHKHCNEGFPSKLAFLYDGFP 154
           ++NP EINSFY+ISKL  NP+DLNKKRKLPAEHLGLPSPKHKHC+EGF SK AFLY G P
Sbjct: 2   EENPTEINSFYIISKL--NPYDLNKKRKLPAEHLGLPSPKHKHCSEGFASKSAFLYGGLP 61

Query: 155 ETEHMNVQLIKGSANVLRFDDGSSPESAKDSNSFCEESDSATSVFHGAKFELNQA--CTY 214
           ET HMNVQ IK +ANVL FD+GS PES KDSNS  EESDSATSVFHGAKFELNQA  CT+
Sbjct: 62  ETGHMNVQFIKENANVLCFDEGSRPESVKDSNSLSEESDSATSVFHGAKFELNQAITCTH 121

Query: 215 DSSSTQCMSFGGASSESTHFSVESSTAMESSSTEQEVAFASGENRIETVHKVQEHLLELD 274
           D+S+TQ MSFGGASSESTHFSVESSTAME  STEQE AF SGENRIET+HK+QEHLLELD
Sbjct: 122 DTSTTQSMSFGGASSESTHFSVESSTAMELISTEQETAFPSGENRIETIHKLQEHLLELD 181

Query: 275 SREDYDFAEYGHDETEQCTDQELEDLFYSNGLDPNAYILSSGRWTVNHEAQSSARAPTID 334
             EDYD AEY + +T+QCTDQELE+LFYSNGL+PN YILSSGRW +NHEAQS ARAPTID
Sbjct: 182 GHEDYDCAEYENGDTKQCTDQELEELFYSNGLNPNTYILSSGRWAINHEAQSRARAPTID 241

Query: 335 QEFEQYFSMLML 344
           QEFEQYFSMLML
Sbjct: 242 QEFEQYFSMLML 251

[Close]

BLAST of Csor.00g094780 vs. TAIR 10
Match: AT2G37678.1 (far-red elongated hypocotyl 1 )

HSP 1 Score: 50.1 bits (118), Expect = 4.2e-06
Identity = 59/211 (27.96%), Postives = 96/211 (45.50%), Query Frame = 0


Query: 155 ETEHMNVQLIKGSANVLRFDDGSSPESAKDSNSFCEESDSATSVFHGAKFELNQACTYDS 214
           E    +  +I  S NVL+ ++    +  K      +E        H      N AC+ ++
Sbjct: 15  EINSFHHMIISSSKNVLKMEEVEVSKKRKFQTDQSDELSLLPLSKHTC--FANVACSENT 74

Query: 215 SSTQCMSFGGASSESTHFS----VESSTAMESSS---TEQEVAFASGENRIETVHKVQEH 274
           +        G S   T +S    V S+T+ME ++    ++E + + GE++          
Sbjct: 75  N--------GNSEIDTEYSMSSYVNSTTSMECNNDIEMKEESSGSCGEDK---------- 134

Query: 275 LLELDSREDYDFAEYGHDETEQCTDQELEDLFY----------SNGLDPNA--YILSSGR 334
           ++  +S  DY    YG    E  +++ +E++ Y          + G   NA  ++LSSGR
Sbjct: 135 MISFESHLDY---IYGTQNLEDFSEKVIENILYLDEQEEEEEDAKGCSSNAAKFVLSSGR 194

Query: 335 WTVNHEAQS--SARAPTIDQEFEQYFSMLML 345
           WTVN +  +    + PTIDQEFEQYFS LML
Sbjct: 195 WTVNQDDSTLHETKKPTIDQEFEQYFSTLML 202

[Close]

BLAST of Csor.00g094780 vs. TAIR 10
Match: AT5G02200.1 (far-red-elongated hypocotyl1-like )

HSP 1 Score: 45.1 bits (105), Expect = 1.4e-04
Identity = 47/141 (33.33%), Postives = 71/141 (50.35%), Query Frame = 0


Query: 210 CTYDSSSTQCMSFGGASSESTH---FSVESSTAMESSSTEQEVAFASGENRIETV-HKVQ 269
           C+Y   +T+      +S+  T    +  + S     SS+    A +S E     V HK Q
Sbjct: 53  CSYAMENTKTSDEASSSASFTGPSLYMFKDSIYSTGSSSSGYAATSSIEQCFSKVDHKTQ 112

Query: 270 EHLLELDSREDYDFAEYGHDETEQCTDQELEDLFYSNGLDP-NAYILSSGRWTV-NHEAQ 329
           E        +D+   E+ + ++E      +EDL     L+P  +YILSS RW+V N +++
Sbjct: 113 E------DTQDFTHMEFIYHDSEFA----VEDL--QEVLNPVESYILSSARWSVSNQDSK 172

Query: 330 SSARAPTIDQEFEQYFSMLML 345
            +   PTIDQEFEQYFS LM+
Sbjct: 173 EATTKPTIDQEFEQYFSTLMM 181

[Close]

BLAST of Csor.00g094780 vs. TAIR 10
Match: AT5G02200.2 (far-red-elongated hypocotyl1-like )

HSP 1 Score: 45.1 bits (105), Expect = 1.4e-04
Identity = 47/141 (33.33%), Postives = 71/141 (50.35%), Query Frame = 0


Query: 210 CTYDSSSTQCMSFGGASSESTH---FSVESSTAMESSSTEQEVAFASGENRIETV-HKVQ 269
           C+Y   +T+      +S+  T    +  + S     SS+    A +S E     V HK Q
Sbjct: 73  CSYAMENTKTSDEASSSASFTGPSLYMFKDSIYSTGSSSSGYAATSSIEQCFSKVDHKTQ 132

Query: 270 EHLLELDSREDYDFAEYGHDETEQCTDQELEDLFYSNGLDP-NAYILSSGRWTV-NHEAQ 329
           E        +D+   E+ + ++E      +EDL     L+P  +YILSS RW+V N +++
Sbjct: 133 E------DTQDFTHMEFIYHDSEFA----VEDL--QEVLNPVESYILSSARWSVSNQDSK 192

Query: 330 SSARAPTIDQEFEQYFSMLML 345
            +   PTIDQEFEQYFS LM+
Sbjct: 193 EATTKPTIDQEFEQYFSTLMM 201

The following BLAST results are available for this feature:

BLAST of Csor.00g094780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S4Q6	6.0e-05	27.96	Protein FAR-RED ELONGATED HYPOCOTYL 1 OS=Arabidopsis thaliana OX=3702 GN=FHY1 PE...	[more]

BLAST of Csor.00g094780 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6580534.1	2.25e-247	100.00	Protein FAR-RED ELONGATED HYPOCOTYL 1, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_022934853.1	5.78e-178	99.61	uncharacterized protein LOC111441892 [Cucurbita moschata] >KAG7017286.1 Protein ...	[more]
XP_023528627.1	7.83e-176	98.43	protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE [Cucurbita pepo subsp. pepo]	[more]
XP_022983598.1	1.26e-167	96.03	protein FAR-RED ELONGATED HYPOCOTYL 1 [Cucurbita maxima]	[more]
XP_004137783.2	9.40e-148	67.04	protein FAR-RED ELONGATED HYPOCOTYL 1 [Cucumis sativus] >KGN58861.1 hypothetical...	[more]

BLAST of Csor.00g094780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F8W9	2.80e-178	99.61	uncharacterized protein LOC111441892 OS=Cucurbita moschata OX=3662 GN=LOC1114418...	[more]
A0A6J1J862	6.12e-168	96.03	protein FAR-RED ELONGATED HYPOCOTYL 1 OS=Cucurbita maxima OX=3661 GN=LOC11148215...	[more]
A0A0A0LFJ8	4.55e-148	67.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734140 PE=4 SV=1	[more]
A0A5A7TMJ2	4.95e-145	70.24	Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like isoform X2 OS=Cucumis melo var. ...	[more]
A0A1S3B5W9	1.27e-136	80.95	uncharacterized protein LOC103486380 OS=Cucumis melo OX=3656 GN=LOC103486380 PE=...	[more]

BLAST of Csor.00g094780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37678.1	4.2e-06	27.96	far-red elongated hypocotyl 1	[more]
AT5G02200.1	1.4e-04	33.33	far-red-elongated hypocotyl1-like	[more]
AT5G02200.2	1.4e-04	33.33	far-red-elongated hypocotyl1-like	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037766	Protein FAR-RED ELONGATED HYPOCOTYL 1	PANTHER	PTHR37723	PROTEIN FAR-RED ELONGATED HYPOCOTYL 1	coord: 91..344
None	No IPR available	PANTHER	PTHR37723:SF1	PROTEIN FAR-RED ELONGATED HYPOCOTYL 1	coord: 91..344

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g094780.m01	Csor.00g094780.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051457	maintenance of protein location in nucleus
biological_process	GO:0009639	response to red or far red light
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus