Csor.00g094490 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g094490
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RING-CH-type domain-containing protein
Location	Csor_Chr14: 472798 .. 475356 (+)
RNA-Seq Expression	Csor.00g094490
Synteny	Csor.00g094490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCCTCCGGAAGTTTCCCAATCCGACATTGATTTGGAACAGGGGAATCATCGGCGGTCTGTTAGTGGTAGTGATTTGAGCGCCGATTGTAGCGTCTATTTCTCTGACGCCGATGAGGGTTCGTGTCCCTCTCAGTTTTTGTCGACCAACGGTGGTTCTTATGATGAGTTTAGGTTTTCTTTTGTTTCTCAGCCGGAGGTTGGGGTTGCTTCGGATTCTCGCCGAGTTTCGTCGGTTTCGGTTCATTCGGTGGAGGTTGAAAATGAAAATGGGATTTCTGAAATCAAGGTGCATTTGGCTAAAGTAGAGAGGGATTGCAGGATTTGTCATTTGGGTTTGGAGAGTAATAGCCAAGAGTCCGGAGTCCCAATCGAATTGGGTTGTTCGTGCAAGGATGATTTGGCTGTTGCTCACAAGCATTGTGCTGAAACCTGGTTCAAAATTAAAGGAAACAAGTAAGTCTACTCCCTGTTTCCCATGGCTTCTGATTATTTTTTCACTCATGTTATGTTATGTTATGCTTGATAGTTCTTTGAGTACATATTTTCAGATTATTTTCTTGCGGCTCTACTCTAGCATGTTCTTGTGATAAGCATCTTCTGAGATAATCCTCATGGGGTTCCACTATTCATTAATTTAAGGAGGCTTAAAGGAAAACTCTTTAGTGTAATGAGCTTGAAGTTGCAGATTAAAGAATGCTTACTTAGAGGGAGCGCTTAGACGAACAAAAAGAAAAAGTAAAGCATTACACTGATTATTCCTTCTTCCCTGTCCCTTTTCTGATGGCTTAGGAATCTCTCTCTCTTTGTCTCTTCGCCCCCTCTGTAAAGTGGATACTCCATTTGCTAGTCTGAACCATGATTCAGTACAAGTGGGGAAAGATTATGTTGATCACACAACAGATCATAAAAGGATCTCTAGTTTAGTTTTGAGTTTTCCGAACTTTTTTAGTCACACAGCTAGCTCTTTCAGTTCCTTGATCTCATGAACGAACATATCCAAATGGTAGTTCATCTTGTGTCAACAAACAGTCAGTTGCCCCATTAGATAAATATATGGAACATGGAATTTGTTTCAGTACACTTCTCATGGATCAGATTCATGCCTTTGATCTAACTTTCCTTACAACTACAATAGTCTTTGTTTCGATCGGCTTGGCTCGATCTAAGTCACTGTTCGAGAGTTCACTGTACTGAGCTGCTCTACAAGATTAATATTCCACAATGCTTATCTTCAGGGAAAATAATGTTGCGAAGTTGGTTGAATTTTGTATATCTGTTGTGATATATACTAAAAAAGATGATATCAGGCTGTCAAAATGTAAAGGATTAGGATATAATACCATCTATTGTGGAAGCAAGACGATGAATATTTGATTTGATGTTAAAAGTACTTTTCCAATGTCATGAATAGGATGTGTCAGTACACATTTTGAAAAAGGGTTATTTGTTAATCACTGAGAAACGAACAGATGATATGTTCTTGCACTTTGCTCCGAATTCCACTGATAAGTGATTTGAAGACTCACAAAAAGGTTCCACAGTATTGTTCATGGACAGTGATTCTGAACATGGGTGATTACAGCCATCTTTAATCAACTATTGCTGGTGTGTGTTTCAATCAATGTCTTGTTAATTGGTGGTCTTACATTTGCTGCATTGCATGATAGATTTACATAATGTGATTTTTGTGTGCATATTTGTTCCTTTGGCTCACTTTATTTATTATTCCTAATCTTCTTGAGCCTTCGCATTAGGACATGTGAGATTTGCCATTCCATGGCACAAAACATTGTCGAACCAAATGAGGTTGAGTTAACAGATCAGTCTAATGAATCCAACAACGCCCCCTCAACAACTGCAGCTGCTGCATCAACTCCCCCATCGGACACCCAAAGCTTCTGGCGTGGGCACCGGTTTCTGAATTTTCTGCTTGCTTGTATGGTATTTGCTTTTGTTGTATCTTGGCTGTTTCACTTCAATGTGCCCACGTAGCGAATCGGGGGAAATCCGATCAAGGAACTTGCAGAAGTTGTAGCTGCAAAAGACCCTCCCTCCAGAGAATTGACTACAAAGTGTCCACATGTACCTCTCCCAACATTCTCCACAAGTTTTTCACCGCACTATCATTCAGTTCCAAGTTACAGAGAAATGTGGTTCAGCAAGAACATGGTTGATGATTCTGAGTATTCCACTGGGCATCATCCTTCTCTATTCTTGTTATGGATTTTCGATATGGTTTCTCTGGATGGTTTGTTGTTAAAAGTATTTAGTTATTGAGCGTTGATTGTGGCGATGTACAGGAGAAACACATGAACAAGCTCTGTGCTTTCTCAAGGTCCCATCTTTACAGCGAAATGAAGCGGTGATTGAAAATGATAAAAAAGGAGGCCAATCTTTTATTTGCTTAAACGAGGAGCAGGCAATTTCCTTGTGGATAAAAAACAGGAAGGTGAGCCCTCCTGGAGTCGGGGAAGACGAGGCGTGTATGGGACCTCTCTCTGTTGTCAAGTGTAAACAAAAATCTGTCAGGAAAACTCATGAAATTGTGGCGTGA

mRNA sequence

ATGGCGCCTCCGGAAGTTTCCCAATCCGACATTGATTTGGAACAGGGGAATCATCGGCGGTCTGTTAGTGGTAGTGATTTGAGCGCCGATTGTAGCGTCTATTTCTCTGACGCCGATGAGGGTTCGTGTCCCTCTCAGTTTTTGTCGACCAACGGTGGTTCTTATGATGAGTTTAGGTTTTCTTTTGTTTCTCAGCCGGAGGTTGGGGTTGCTTCGGATTCTCGCCGAGTTTCGTCGGTTTCGGTTCATTCGGTGGAGGTTGAAAATGAAAATGGGATTTCTGAAATCAAGGTGCATTTGGCTAAAGTAGAGAGGGATTGCAGGATTTGTCATTTGGGTTTGGAGAGTAATAGCCAAGAGTCCGGAGTCCCAATCGAATTGGGTTGTTCGTGCAAGGATGATTTGGCTGTTGCTCACAAGCATTGTGCTGAAACCTGGTTCAAAATTAAAGGAAACAAGACATGTGAGATTTGCCATTCCATGGCACAAAACATTGTCGAACCAAATGAGGTTGAGTTAACAGATCAGTCTAATGAATCCAACAACGCCCCCTCAACAACTGCAGCTGCTGCATCAACTCCCCCATCGGACACCCAAAGCTTCTGGCGTGGGCACCGGTTTCTGAATTTTCTGCTTGCTTGTATGCGAATCGGGGGAAATCCGATCAAGGAACTTGCAGAAGTTGTAGCTGCAAAAGACCCTCCCTCCAGAGAATTGACTACAAAGTGTCCACATGTACCTCTCCCAACATTCTCCACAAGTTTTTCACCGCACTATCATTCAGTTCCAAGTTACAGAGAAATGTGGTTCAGCAAGAACATGGTTGATGATTCTGAGTATTCCACTGGGCATCATCCTTCTCTATTCTTGTTATGGATTTTCGATATGGTTTCTCTGGATGGTTTGTTGTTAAAACGAAATGAAGCGGTGATTGAAAATGATAAAAAAGGAGGCCAATCTTTTATTTGCTTAAACGAGGAGCAGGCAATTTCCTTGTGGATAAAAAACAGGAAGGTGAGCCCTCCTGGAGTCGGGGAAGACGAGGCGTGTATGGGACCTCTCTCTGTTGTCAAGTGTAAACAAAAATCTGTCAGGAAAACTCATGAAATTGTGGCGTGA

Coding sequence (CDS)

ATGGCGCCTCCGGAAGTTTCCCAATCCGACATTGATTTGGAACAGGGGAATCATCGGCGGTCTGTTAGTGGTAGTGATTTGAGCGCCGATTGTAGCGTCTATTTCTCTGACGCCGATGAGGGTTCGTGTCCCTCTCAGTTTTTGTCGACCAACGGTGGTTCTTATGATGAGTTTAGGTTTTCTTTTGTTTCTCAGCCGGAGGTTGGGGTTGCTTCGGATTCTCGCCGAGTTTCGTCGGTTTCGGTTCATTCGGTGGAGGTTGAAAATGAAAATGGGATTTCTGAAATCAAGGTGCATTTGGCTAAAGTAGAGAGGGATTGCAGGATTTGTCATTTGGGTTTGGAGAGTAATAGCCAAGAGTCCGGAGTCCCAATCGAATTGGGTTGTTCGTGCAAGGATGATTTGGCTGTTGCTCACAAGCATTGTGCTGAAACCTGGTTCAAAATTAAAGGAAACAAGACATGTGAGATTTGCCATTCCATGGCACAAAACATTGTCGAACCAAATGAGGTTGAGTTAACAGATCAGTCTAATGAATCCAACAACGCCCCCTCAACAACTGCAGCTGCTGCATCAACTCCCCCATCGGACACCCAAAGCTTCTGGCGTGGGCACCGGTTTCTGAATTTTCTGCTTGCTTGTATGCGAATCGGGGGAAATCCGATCAAGGAACTTGCAGAAGTTGTAGCTGCAAAAGACCCTCCCTCCAGAGAATTGACTACAAAGTGTCCACATGTACCTCTCCCAACATTCTCCACAAGTTTTTCACCGCACTATCATTCAGTTCCAAGTTACAGAGAAATGTGGTTCAGCAAGAACATGGTTGATGATTCTGAGTATTCCACTGGGCATCATCCTTCTCTATTCTTGTTATGGATTTTCGATATGGTTTCTCTGGATGGTTTGTTGTTAAAACGAAATGAAGCGGTGATTGAAAATGATAAAAAAGGAGGCCAATCTTTTATTTGCTTAAACGAGGAGCAGGCAATTTCCTTGTGGATAAAAAACAGGAAGGTGAGCCCTCCTGGAGTCGGGGAAGACGAGGCGTGTATGGGACCTCTCTCTGTTGTCAAGTGTAAACAAAAATCTGTCAGGAAAACTCATGAAATTGTGGCGTGA

Protein sequence

MAPPEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRFSFVSQPEVGVASDSRRVSSVSVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQESGVPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSMAQNIVEPNEVELTDQSNESNNAPSTTAAAASTPPSDTQSFWRGHRFLNFLLACMRIGGNPIKELAEVVAAKDPPSRELTTKCPHVPLPTFSTSFSPHYHSVPSYREMWFSKNMVDDSEYSTGHHPSLFLLWIFDMVSLDGLLLKRNEAVIENDKKGGQSFICLNEEQAISLWIKNRKVSPPGVGEDEACMGPLSVVKCKQKSVRKTHEIVA

Homology

[Close]

BLAST of Csor.00g094490 vs. NCBI nr
Match: KAG6580505.1 (hypothetical protein SDJN03_20507, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 752 bits (1942), Expect = 3.62e-274
Identity = 372/372 (100.00%), Postives = 372/372 (100.00%), Query Frame = 0


Query: 1   MAPPEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF 60
           MAPPEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF
Sbjct: 1   MAPPEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF 60

Query: 61  SFVSQPEVGVASDSRRVSSVSVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120
           SFVSQPEVGVASDSRRVSSVSVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE
Sbjct: 61  SFVSQPEVGVASDSRRVSSVSVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120

Query: 121 SGVPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSMAQNIVEPNEVELTDQSNES 180
           SGVPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSMAQNIVEPNEVELTDQSNES
Sbjct: 121 SGVPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSMAQNIVEPNEVELTDQSNES 180

Query: 181 NNAPSTTAAAASTPPSDTQSFWRGHRFLNFLLACMRIGGNPIKELAEVVAAKDPPSRELT 240
           NNAPSTTAAAASTPPSDTQSFWRGHRFLNFLLACMRIGGNPIKELAEVVAAKDPPSRELT
Sbjct: 181 NNAPSTTAAAASTPPSDTQSFWRGHRFLNFLLACMRIGGNPIKELAEVVAAKDPPSRELT 240

Query: 241 TKCPHVPLPTFSTSFSPHYHSVPSYREMWFSKNMVDDSEYSTGHHPSLFLLWIFDMVSLD 300
           TKCPHVPLPTFSTSFSPHYHSVPSYREMWFSKNMVDDSEYSTGHHPSLFLLWIFDMVSLD
Sbjct: 241 TKCPHVPLPTFSTSFSPHYHSVPSYREMWFSKNMVDDSEYSTGHHPSLFLLWIFDMVSLD 300

Query: 301 GLLLKRNEAVIENDKKGGQSFICLNEEQAISLWIKNRKVSPPGVGEDEACMGPLSVVKCK 360
           GLLLKRNEAVIENDKKGGQSFICLNEEQAISLWIKNRKVSPPGVGEDEACMGPLSVVKCK
Sbjct: 301 GLLLKRNEAVIENDKKGGQSFICLNEEQAISLWIKNRKVSPPGVGEDEACMGPLSVVKCK 360

Query: 361 QKSVRKTHEIVA 372
           QKSVRKTHEIVA
Sbjct: 361 QKSVRKTHEIVA 372

[Close]

BLAST of Csor.00g094490 vs. NCBI nr
Match: KAG7017255.1 (hypothetical protein SDJN02_19118, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 431 bits (1107), Expect = 3.03e-149
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MAPPEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF 60
           MAPPEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF
Sbjct: 1   MAPPEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF 60

Query: 61  SFVSQPEVGVASDSRRVSSVSVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120
           SFVSQPEVGVASDSRRVSSVSVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE
Sbjct: 61  SFVSQPEVGVASDSRRVSSVSVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120

Query: 121 SGVPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSMAQNIVEPNEVELTDQSNES 180
           SGVPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSMAQNIVEPNEVELTDQSNES
Sbjct: 121 SGVPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSMAQNIVEPNEVELTDQSNES 180

Query: 181 NNAPSTTAAAASTPPSDTQSFWRGHRFLNFLLACM 215
           NNAPSTTAAAASTPPSDTQSFWRGHRFLNFLLACM
Sbjct: 181 NNAPSTTAAAASTPPSDTQSFWRGHRFLNFLLACM 215

[Close]

BLAST of Csor.00g094490 vs. NCBI nr
Match: XP_022934902.1 (uncharacterized protein LOC111441939 [Cucurbita moschata])

HSP 1 Score: 419 bits (1077), Expect = 1.11e-144
Identity = 208/215 (96.74%), Postives = 212/215 (98.60%), Query Frame = 0


Query: 1   MAPPEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF 60
           MAPPEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSD DEGSCPSQFLSTNGGSYDEFRF
Sbjct: 1   MAPPEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDPDEGSCPSQFLSTNGGSYDEFRF 60

Query: 61  SFVSQPEVGVASDSRRVSSVSVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120
           SFVSQPEVGVASDSRRVSSVSVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE
Sbjct: 61  SFVSQPEVGVASDSRRVSSVSVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120

Query: 121 SGVPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSMAQNIVEPNEVELTDQSNES 180
           SG+PIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHS+AQNIVEPNEVELT+QSNES
Sbjct: 121 SGIPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVEPNEVELTEQSNES 180

Query: 181 NNAPSTTAAAASTPPSDTQSFWRGHRFLNFLLACM 215
           NNA STTA AASTPPSD+QSFWRGHRFLNFLLACM
Sbjct: 181 NNASSTTAVAASTPPSDSQSFWRGHRFLNFLLACM 215

[Close]

BLAST of Csor.00g094490 vs. NCBI nr
Match: XP_022983479.1 (uncharacterized protein LOC111482069 [Cucurbita maxima])

HSP 1 Score: 419 bits (1076), Expect = 1.57e-144
Identity = 207/215 (96.28%), Postives = 211/215 (98.14%), Query Frame = 0


Query: 1   MAPPEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF 60
           MAPPEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF
Sbjct: 1   MAPPEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF 60

Query: 61  SFVSQPEVGVASDSRRVSSVSVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120
           SFVSQPEVGVA DSRRVSSV VHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE
Sbjct: 61  SFVSQPEVGVAPDSRRVSSVEVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120

Query: 121 SGVPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSMAQNIVEPNEVELTDQSNES 180
           SG+P+ELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHS+AQNIVEPNEVELT+QSNES
Sbjct: 121 SGIPVELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVEPNEVELTEQSNES 180

Query: 181 NNAPSTTAAAASTPPSDTQSFWRGHRFLNFLLACM 215
           NNA STTA AASTPPSDTQSFWRGHRFLNFLLACM
Sbjct: 181 NNASSTTAVAASTPPSDTQSFWRGHRFLNFLLACM 215

[Close]

BLAST of Csor.00g094490 vs. NCBI nr
Match: XP_023526520.1 (uncharacterized protein LOC111789997 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 414 bits (1063), Expect = 1.49e-142
Identity = 207/215 (96.28%), Postives = 209/215 (97.21%), Query Frame = 0


Query: 1   MAPPEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF 60
           MAPPEVSQS IDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF
Sbjct: 1   MAPPEVSQSHIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF 60

Query: 61  SFVSQPEVGVASDSRRVSSVSVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120
           SFVSQP VGVASDSRRVSSVS HSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE
Sbjct: 61  SFVSQPGVGVASDSRRVSSVSAHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120

Query: 121 SGVPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSMAQNIVEPNEVELTDQSNES 180
           SG+PIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHS+AQNIVEPNEVELTDQSNES
Sbjct: 121 SGIPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVEPNEVELTDQSNES 180

Query: 181 NNAPSTTAAAASTPPSDTQSFWRGHRFLNFLLACM 215
           NNA STTA AAST PSDTQSFWRGHRFLNFLLACM
Sbjct: 181 NNASSTTAVAASTHPSDTQSFWRGHRFLNFLLACM 215

[Close]

BLAST of Csor.00g094490 vs. ExPASy TrEMBL
Match: A0A6J1F436 (uncharacterized protein LOC111441939 OS=Cucurbita moschata OX=3662 GN=LOC111441939 PE=4 SV=1)

HSP 1 Score: 419 bits (1077), Expect = 5.37e-145
Identity = 208/215 (96.74%), Postives = 212/215 (98.60%), Query Frame = 0


Query: 1   MAPPEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF 60
           MAPPEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSD DEGSCPSQFLSTNGGSYDEFRF
Sbjct: 1   MAPPEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDPDEGSCPSQFLSTNGGSYDEFRF 60

Query: 61  SFVSQPEVGVASDSRRVSSVSVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120
           SFVSQPEVGVASDSRRVSSVSVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE
Sbjct: 61  SFVSQPEVGVASDSRRVSSVSVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120

Query: 121 SGVPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSMAQNIVEPNEVELTDQSNES 180
           SG+PIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHS+AQNIVEPNEVELT+QSNES
Sbjct: 121 SGIPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVEPNEVELTEQSNES 180

Query: 181 NNAPSTTAAAASTPPSDTQSFWRGHRFLNFLLACM 215
           NNA STTA AASTPPSD+QSFWRGHRFLNFLLACM
Sbjct: 181 NNASSTTAVAASTPPSDSQSFWRGHRFLNFLLACM 215

[Close]

BLAST of Csor.00g094490 vs. ExPASy TrEMBL
Match: A0A6J1J7I4 (uncharacterized protein LOC111482069 OS=Cucurbita maxima OX=3661 GN=LOC111482069 PE=4 SV=1)

HSP 1 Score: 419 bits (1076), Expect = 7.62e-145
Identity = 207/215 (96.28%), Postives = 211/215 (98.14%), Query Frame = 0


Query: 1   MAPPEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF 60
           MAPPEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF
Sbjct: 1   MAPPEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF 60

Query: 61  SFVSQPEVGVASDSRRVSSVSVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120
           SFVSQPEVGVA DSRRVSSV VHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE
Sbjct: 61  SFVSQPEVGVAPDSRRVSSVEVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120

Query: 121 SGVPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSMAQNIVEPNEVELTDQSNES 180
           SG+P+ELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHS+AQNIVEPNEVELT+QSNES
Sbjct: 121 SGIPVELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSIAQNIVEPNEVELTEQSNES 180

Query: 181 NNAPSTTAAAASTPPSDTQSFWRGHRFLNFLLACM 215
           NNA STTA AASTPPSDTQSFWRGHRFLNFLLACM
Sbjct: 181 NNASSTTAVAASTPPSDTQSFWRGHRFLNFLLACM 215

[Close]

BLAST of Csor.00g094490 vs. ExPASy TrEMBL
Match: A0A6J1CX83 (uncharacterized protein LOC111015024 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015024 PE=4 SV=1)

HSP 1 Score: 385 bits (990), Expect = 5.51e-131
Identity = 207/284 (72.89%), Postives = 232/284 (81.69%), Query Frame = 0


Query: 1   MAPPEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF 60
           M  PEVSQSDIDLEQGNHRRSVSGSD+SADCSVYFSDADEGSC SQF STNGGSYDE+RF
Sbjct: 1   MPTPEVSQSDIDLEQGNHRRSVSGSDVSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  SFVSQPEVGVASDSRRVSSVSVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120
           +FV+QPEVGV SDSRRVSSVS  SVEVENENGI+EIKVHLAKVERDCRICHLGLESNSQE
Sbjct: 61  AFVAQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHLAKVERDCRICHLGLESNSQE 120

Query: 121 SGVPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSMAQNIVEPNEVELTDQSNES 180
           SG+PIELGCSCKDDLA AHKHCAETWFKI+GNKTCEICHS+A+NI+ P+EVELT+QS ES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIRGNKTCEICHSIARNILGPHEVELTEQSTES 180

Query: 181 NNAPSTTAAAASTPPSDTQSFWRGHRFLNFLLA-------CMRIGGNPIKELAEVVAAKD 240
           NNA ST A AAS P SD+QSFWRGHRFLNFLLA       C       ++ +A  V+   
Sbjct: 181 NNASSTAAVAASIPSSDSQSFWRGHRFLNFLLAWKSDQRACRFCCCKRLQRVAYRVSIT- 240

Query: 241 PPSRELTTKCPHVPLPTF-STSFSPH----YHSVPSYREMWFSK 272
             S +L++   HVP+PTF S S SP     +HS+PSY  + FS+
Sbjct: 241 --SYQLSSHT-HVPIPTFPSKSISPSLPVPFHSIPSYXGIQFSQ 280

[Close]

BLAST of Csor.00g094490 vs. ExPASy TrEMBL
Match: A0A0A0LAC9 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G733180 PE=4 SV=1)

HSP 1 Score: 381 bits (978), Expect = 6.02e-130
Identity = 190/215 (88.37%), Postives = 199/215 (92.56%), Query Frame = 0


Query: 1   MAPPEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF 60
           M P EVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSC SQF STNGGSYDE+RF
Sbjct: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  SFVSQPEVGVASDSRRVSSVSVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120
           +FVSQPEVGV SDSRRVSSVS  SVEVENENGI+EIKVH AKVERDCRICHLGLESNSQE
Sbjct: 61  AFVSQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120

Query: 121 SGVPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSMAQNIVEPNEVELTDQSNES 180
           SG+PIELGCSCKDDLA AHKHCAETWFKIKGNKTCEICHS+A+NI+ PNEVELT+QSNES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180

Query: 181 NNAPSTTAAAASTPPSDTQSFWRGHRFLNFLLACM 215
           NNA STT  AAS P SD+QSFW GHRFLNFLLACM
Sbjct: 181 NNASSTTTVAASIPSSDSQSFWCGHRFLNFLLACM 215

[Close]

BLAST of Csor.00g094490 vs. ExPASy TrEMBL
Match: A0A5D3DN10 (E3 ubiquitin-protein ligase MARCH2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001190 PE=4 SV=1)

HSP 1 Score: 381 bits (978), Expect = 1.14e-129
Identity = 192/225 (85.33%), Postives = 202/225 (89.78%), Query Frame = 0


Query: 1   MAPPEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRF 60
           M P EVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSC SQF STNGGSYDE+RF
Sbjct: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  SFVSQPEVGVASDSRRVSSVSVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQE 120
           +FVSQPEVGV  DSRRVSSVS  SVEVENENGI+EIKVH AKVERDCRICHLGLESNSQE
Sbjct: 61  AFVSQPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120

Query: 121 SGVPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSMAQNIVEPNEVELTDQSNES 180
           SG+PIELGCSCKDDLA AHKHCAETWFKIKGNKTCEICHS+A+NI+ PNEVELT+QSNES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180

Query: 181 NNAPSTTAAAASTPPSDTQSFWRGHRFLNFLLACMRIGGNPIKEL 225
           NNA STT  AAS P SD+ SFWRGHRFLNFLLACM     PI +L
Sbjct: 181 NNASSTTTVAASIPSSDSHSFWRGHRFLNFLLACME---KPINKL 222

[Close]

BLAST of Csor.00g094490 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 175.6 bits (444), Expect = 7.2e-44
Identity = 88/163 (53.99%), Postives = 111/163 (68.10%), Query Frame = 0


Query: 53  GSYDEFRFSFVSQPEVGVASDSRRVSSVSVHSVEVENENGISEIKVHLAKVERDCRICHL 112
           G  +  R S   + E  +  D  R S+ SV SVE++ E G+ E  VHL++ ERDCRICH+
Sbjct: 25  GDGEPRRSSGAVEKEEEIVKDEERRSNASVCSVEIDLELGLPEKVVHLSQSERDCRICHM 84

Query: 113 GLESNSQESGVPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSMAQNIVEPNEVE 172
            L++ + ESGVPIELGCSCK DLA AHKHCAETWFKIKGNK CE+C S+A N+V   EVE
Sbjct: 85  SLDAANLESGVPIELGCSCKADLAAAHKHCAETWFKIKGNKICEVCGSIAGNVVGSVEVE 144

Query: 173 LTDQSNESNNAPSTTAAAASTPPSDTQSFWRGHRFLNFLLACM 216
             +  NE+N   + T   +     + +SFW+GHRFLNFLLACM
Sbjct: 145 SEESRNEANGVENLTLRTSGPRLVEGRSFWQGHRFLNFLLACM 187

[Close]

BLAST of Csor.00g094490 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 154.5 bits (389), Expect = 1.7e-37
Identity = 102/217 (47.00%), Postives = 129/217 (59.45%), Query Frame = 0


Query: 9   SDIDLEQGN----HRRSVSGSDLSADCSVYFSDA-DEGSCPSQFLSTNGGSYDEFRFSFV 68
           +DIDLEQG     HRRS+ GSD+    SVY+SD  D  SC S F ST GGSY+       
Sbjct: 3   TDIDLEQGGAFGYHRRSLDGSDV----SVYYSDGEDVMSCYSYFYSTTGGSYEY------ 62

Query: 69  SQPEVGVASDSRRVSSV-SVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQESG 128
                     SR+VSSV S  S E+++++         A  E+DCRICHLG+E++    G
Sbjct: 63  ------EGDQSRKVSSVMSPSSSEIDDDDA-------TAPPEKDCRICHLGVETS---GG 122

Query: 129 VPIELGCSCKDDLAVAHKHCAETWFKIKGNKTCEICHSMAQNIVEPNE-VELTDQSNESN 188
             IELGCSCKDDLAVAH+ CAETWFKIKG+KTCEIC S+A+N+   NE V  T +  E  
Sbjct: 123 GAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEICQSVARNVGGANEMVGSTMEERELR 182

Query: 189 NAPSTTAAAASTPPSDTQSFWRGHRFLNFLLACMRIG 219
           N    TAA      +  ++ W+  R +N +LACM  G
Sbjct: 183 NG-EETAAGEGGGATVVENRWQPQRVVNLVLACMVFG 192

[Close]

BLAST of Csor.00g094490 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 134.4 bits (337), Expect = 1.8e-31
Identity = 84/209 (40.19%), Postives = 109/209 (52.15%), Query Frame = 0


Query: 9   SDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRFSFVSQPEV 68
           S IDLE G+  R    SD+S +        D  SC   +      +   F   F    ++
Sbjct: 7   SHIDLENGSGERQYRPSDVSGE--------DSSSCDYDY--DFHSAVRSFCGEFEIADDL 66

Query: 69  GVASDSRRVSSVSVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQESGVPIELG 128
              +D+  V+S S+                     E+DCRICHLGLES+  E G P+ LG
Sbjct: 67  DDETDTESVASGSIR-----------------GSPEKDCRICHLGLESSRHECGDPMVLG 126

Query: 129 CSCKDDLAVAHKHCAETWFKIKGNKTCEICHSMAQNIVE-PNEV-ELTDQSNESNNAPST 188
           CSCKDDL   HK CA+TWFKIKGNKTCEIC S+AQN  +  NE+ + T ++N  +     
Sbjct: 127 CSCKDDLGYVHKQCADTWFKIKGNKTCEICRSIAQNFFKVDNEIGQTTVETNVDDVEAGN 186

Query: 189 TAAAASTPPSDTQSFWRGHRFLNFLLACM 216
           T    +T  SD +   RG+RFLNFLL CM
Sbjct: 187 TPTMVATSDSDDRRLCRGNRFLNFLLTCM 188

[Close]

BLAST of Csor.00g094490 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 104.0 bits (258), Expect = 2.7e-22
Identity = 59/144 (40.97%), Postives = 74/144 (51.39%), Query Frame = 0


Query: 105 RDCRICHLGLESNSQES-------------------------------GVPIELGCSCKD 164
           RDCRICHL LE+N +                                 G+P++LGCSCK 
Sbjct: 79  RDCRICHLPLETNKEAEDEDEEEEDDSDDDEDEEDEEEEEEEEEEEYYGLPLQLGCSCKG 138

Query: 165 DLAVAHKHCAETWFKIKGNKTCEICHSMAQNIVEPNEVELTDQSNESNNAPSTTAAAA-- 216
           DL VAH  CAETWFKIKGN TCEIC +MA N+         +QSN  + A + + AAA  
Sbjct: 139 DLGVAHSKCAETWFKIKGNMTCEICGAMALNVA-------GEQSNPESTASTHSQAAAGQ 198

[Close]

BLAST of Csor.00g094490 vs. TAIR 10
Match: AT5G01070.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 90.9 bits (224), Expect = 2.3e-18
Identity = 56/145 (38.62%), Postives = 71/145 (48.97%), Query Frame = 0


Query: 9   SDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCPSQFLSTNGGSYDEFRFSFVSQPEV 68
           S IDLE G+  R    SD+S +        D  SC   +      +   F   F    ++
Sbjct: 7   SHIDLENGSGERQYRPSDVSGE--------DSSSCDYDY--DFHSAVRSFCGEFEIADDL 66

Query: 69  GVASDSRRVSSVSVHSVEVENENGISEIKVHLAKVERDCRICHLGLESNSQESGVPIELG 128
              +D+  V+S S+                     E+DCRICHLGLES+  E G P+ LG
Sbjct: 67  DDETDTESVASGSIR-----------------GSPEKDCRICHLGLESSRHECGDPMVLG 124

Query: 129 CSCKDDLAVAHKHCAETWFKIKGNK 154
           CSCKDDL   HK CA+TWFKIKGNK
Sbjct: 127 CSCKDDLGYVHKQCADTWFKIKGNK 124

The following BLAST results are available for this feature:

BLAST of Csor.00g094490 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g094490 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6580505.1	3.62e-274	100.00	hypothetical protein SDJN03_20507, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7017255.1	3.03e-149	100.00	hypothetical protein SDJN02_19118, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022934902.1	1.11e-144	96.74	uncharacterized protein LOC111441939 [Cucurbita moschata]	[more]
XP_022983479.1	1.57e-144	96.28	uncharacterized protein LOC111482069 [Cucurbita maxima]	[more]
XP_023526520.1	1.49e-142	96.28	uncharacterized protein LOC111789997 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g094490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F436	5.37e-145	96.74	uncharacterized protein LOC111441939 OS=Cucurbita moschata OX=3662 GN=LOC1114419...	[more]
A0A6J1J7I4	7.62e-145	96.28	uncharacterized protein LOC111482069 OS=Cucurbita maxima OX=3661 GN=LOC111482069...	[more]
A0A6J1CX83	5.51e-131	72.89	uncharacterized protein LOC111015024 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A0A0LAC9	6.02e-130	88.37	RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G73318...	[more]
A0A5D3DN10	1.14e-129	85.33	E3 ubiquitin-protein ligase MARCH2-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of Csor.00g094490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05830.1	7.2e-44	53.99	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G37950.1	1.7e-37	47.00	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.2	1.8e-31	40.19	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G59000.1	2.7e-22	40.97	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.1	2.3e-18	38.62	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 106..159 e-value: 2.2E-18 score: 77.1
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 107..158 e-value: 1.8E-9 score: 37.6
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 99..165 score: 18.874094
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 93..168 e-value: 5.1E-15 score: 56.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..198
None	No IPR available	PANTHER	PTHR46214:SF5	OS01G0850200 PROTEIN	coord: 8..215
None	No IPR available	PANTHER	PTHR46214	ZINC FINGER, RING-CH-TYPE	coord: 8..215
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 107..159 e-value: 1.94075E-12 score: 59.6484
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 104..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g094490.m01	Csor.00g094490.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding