Csor.00g092740 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g092740
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	ras-related protein RABA6b-like
Location	Csor_Chr11: 1571894 .. 1573398 (-)
RNA-Seq Expression	Csor.00g092740
Synteny	Csor.00g092740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGATTCATTCGACGAAGAGTGCGATTATCTGTTCAAGGCGGTTCTGACGGGCGATTCCGGCGTCGGAAAATCCAATCTCCTCTCCCGTTTCGCCAGAGCCGAGTTCCGATTGGATTCCAAACCTACCATCGGCGTCGAATTCGCTTACCGGAATATCAAGGTCGCCGATAAACTCATCAAGACCCAAATCTGGGACACCGCCGGCCAAGAAAGGTCACTCTTCTTCTTCCTATCTTTTAAGCTTCTTTCCATCGCTTTTCTTAATTATGCTTAGATAAGTTTATGCGTTCTAAAAATTTTAAAAACTCTATAGGTGACGTTGGGACATGTTCTTAATTTATTTTGTTTTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTTAAAAAAAAATATTAGGTCGGATTAAAAGGAGAGAAAAAATTGGTCCTTTTGGTGGGACCCACGAACCTAAAAGAGAAATGAAACCTGTCGTTTAGCGATTGATTAAAGGCTAATATGTCTCCAAATAAAACAAGACATTCCAAACCTAGGGTTCATGGAAGGAATAGTGTCTTAAATTTAAATGTCCTAATTATTATTAATTACAACCTTAATCTAAGTTATTCACTAATCCATCTTTTTCTACCAAATTTTATTCCCTCCATTTATGAGCCGATTTTCTGCATTAAATAAAAAAGGCTACCATTTCTAATTTTTTCCATAAATTTAAGCCTGTTTTTTAGGTTTATTTTATTGTCCAATAAGAATTTGACACGTAGAAACCAGAAGTAAAAAGGTGTCCGGTAAAAAGATATTAAAGGAAAATAATTAAATTATTATTATCCGCGACAAAGGCGGTTTGTTCCGGAAGGCTACAAGTTTCTAAAGAGGTCAGAAAAAGTTATTTTCTATTATCTTAATATTTTAATACCAAATTTGTTAATAATGTCATTTTTTTATTTATTGTTTTATTTGTTACATTCAAATCTACGAATTTAAGTTTATGTTAATATATAGTTTTAATACCTTAATGTTCTACTAAGTTTTTAATCTAAATTTGATTAAGACGGGTATAGATTTAGGGCAATTACAAGCTCTTATTATCGAGGAGCATTGGGAGCATTGCTAGTATATGATATAACTCGAGCGGTCACATTTGAGAATGTGAAGAAGTGGCTACGAGAGCTAAGAGATTTTGGGAATTCGGACATGGTCATTGTTCTAGTTGGGAATAAAAGTGATTTGAGCCATTCTCGAGAAGTGCATGAAGAAGAAGGACGGCGTTTGGCAGAGTCTGAAGACTTATTTTTCATGGAAACTTCTGCCATGGATAATGTGAACGTGGAAGAGGCATTTCTTGAAATGGTTCGTAGGATCCATGCGATTGCTTCCCAAAAAAGCCTAAATTTACCGAAACGAATTGAAAAGCTTGTTGCTTTTCCAAATGGAAAAGAGATTGTTCATGAAGTTACTCCTACCAAACCCAATTCATATTGTTGTTATTTATGA

mRNA sequence

ATGGCGGATTCATTCGACGAAGAGTGCGATTATCTGTTCAAGGCGGTTCTGACGGGCGATTCCGGCGTCGGAAAATCCAATCTCCTCTCCCGTTTCGCCAGAGCCGAGTTCCGATTGGATTCCAAACCTACCATCGGCGTCGAATTCGCTTACCGGAATATCAAGGTCGCCGATAAACTCATCAAGACCCAAATCTGGGACACCGCCGGCCAAGAAAGATTTAGGGCAATTACAAGCTCTTATTATCGAGGAGCATTGGGAGCATTGCTAGTATATGATATAACTCGAGCGGTCACATTTGAGAATGTGAAGAAGTGGCTACGAGAGCTAAGAGATTTTGGGAATTCGGACATGGTCATTGTTCTAGTTGGGAATAAAAGTGATTTGAGCCATTCTCGAGAAGTGCATGAAGAAGAAGGACGGCGTTTGGCAGAGTCTGAAGACTTATTTTTCATGGAAACTTCTGCCATGGATAATGTGAACGTGGAAGAGGCATTTCTTGAAATGGTTCGTAGGATCCATGCGATTGCTTCCCAAAAAAGCCTAAATTTACCGAAACGAATTGAAAAGCTTGTTGCTTTTCCAAATGGAAAAGAGATTGTTCATGAAGTTACTCCTACCAAACCCAATTCATATTGTTGTTATTTATGA

Coding sequence (CDS)

ATGGCGGATTCATTCGACGAAGAGTGCGATTATCTGTTCAAGGCGGTTCTGACGGGCGATTCCGGCGTCGGAAAATCCAATCTCCTCTCCCGTTTCGCCAGAGCCGAGTTCCGATTGGATTCCAAACCTACCATCGGCGTCGAATTCGCTTACCGGAATATCAAGGTCGCCGATAAACTCATCAAGACCCAAATCTGGGACACCGCCGGCCAAGAAAGATTTAGGGCAATTACAAGCTCTTATTATCGAGGAGCATTGGGAGCATTGCTAGTATATGATATAACTCGAGCGGTCACATTTGAGAATGTGAAGAAGTGGCTACGAGAGCTAAGAGATTTTGGGAATTCGGACATGGTCATTGTTCTAGTTGGGAATAAAAGTGATTTGAGCCATTCTCGAGAAGTGCATGAAGAAGAAGGACGGCGTTTGGCAGAGTCTGAAGACTTATTTTTCATGGAAACTTCTGCCATGGATAATGTGAACGTGGAAGAGGCATTTCTTGAAATGGTTCGTAGGATCCATGCGATTGCTTCCCAAAAAAGCCTAAATTTACCGAAACGAATTGAAAAGCTTGTTGCTTTTCCAAATGGAAAAGAGATTGTTCATGAAGTTACTCCTACCAAACCCAATTCATATTGTTGTTATTTATGA

Protein sequence

MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKLIKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVIVLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQKSLNLPKRIEKLVAFPNGKEIVHEVTPTKPNSYCCYL

Homology

[Close]

BLAST of Csor.00g092740 vs. ExPASy Swiss-Prot
Match: Q0WQN4 (Ras-related protein RABA6b OS=Arabidopsis thaliana OX=3702 GN=RABA6B PE=2 SV=2)

HSP 1 Score: 294.7 bits (753), Expect = 8.7e-79
Identity = 152/226 (67.26%), Postives = 177/226 (78.32%), Query Frame = 0


Query: 3   DSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKLIK 62
           +S+DEECDYLFKAVL GDS VGKSNLLSRF+R EFRLDSKPTIGV+FAYRN++V DK IK
Sbjct: 4   ESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIK 63

Query: 63  TQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVIVL 122
            QIWDTAGQERFRAITSSYYRGALGALL+YDITR +TF+N++KWL ELR F + + V+VL
Sbjct: 64  AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVL 123

Query: 123 VGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQKSL 182
           VGNKSDL  SREV EEEG+ LAESE L+F+ETSA++N NVEEAFL M+ RIH + +QK +
Sbjct: 124 VGNKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQK-I 183

Query: 183 NLPKRI-------EKLVAFPNGKEIV--HEVTPTKP----NSYCCY 216
            L  R+             P GKEIV  HEVT T+P     S CCY
Sbjct: 184 VLDNRLNGDGNNESNGAVVPPGKEIVNIHEVTATRPLSTSLSNCCY 228

[Close]

BLAST of Csor.00g092740 vs. ExPASy Swiss-Prot
Match: Q9C9U7 (Ras-related protein RABA6a OS=Arabidopsis thaliana OX=3702 GN=RABA6A PE=2 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 2.5e-78
Identity = 150/229 (65.50%), Postives = 176/229 (76.86%), Query Frame = 0


Query: 3   DSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKLIK 62
           D+++EECDYLFKAVL GDS VGKSNLLSRF++ EFR DSKPTIGVEFAYRN+ V DK+IK
Sbjct: 4   DTYEEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIK 63

Query: 63  TQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVIVL 122
            QIWDTAGQERFRAITSSYYRGALGALL+YDITR  TF+N+KKWL ELRDF N + V+VL
Sbjct: 64  AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVL 123

Query: 123 VGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQKSL 182
           VGNKSDL  SREV E+EG+ LAESE L+F+ETSA++NVNVEEAFL M+ RIH + +Q+  
Sbjct: 124 VGNKSDLRQSREVEEDEGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHEVVTQRIA 183

Query: 183 NLPKRIEKL----------VAFPNGKEIV--HEVTPTKP----NSYCCY 216
           +  K                  P GKEIV  HEVT T+P    +S CC+
Sbjct: 184 SENKSNGAATPHINGNGNGTVLPVGKEIVNIHEVTATQPLLSSSSNCCF 232

[Close]

BLAST of Csor.00g092740 vs. ExPASy Swiss-Prot
Match: Q9FJH0 (Ras-related protein RABA1f OS=Arabidopsis thaliana OX=3702 GN=RABA1F PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 6.7e-63
Identity = 119/195 (61.03%), Postives = 155/195 (79.49%), Query Frame = 0


Query: 6   DEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKLIKTQI 65
           D+E DYLFK VL GDSGVGKSNLLSRF R EF L+SK TIGVEFA R+I V DK++K QI
Sbjct: 7   DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQI 66

Query: 66  WDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVIVLVGN 125
           WDTAGQER+RAITS+YYRGA+GALLVYD+TR VTFENV++WL+ELRD  ++++VI+ VGN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGN 126

Query: 126 KSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQKSLNLP 185
           K+DL H R V  E+ +  AE E+ FFMETSA++++NVE AF E++ +I+ + S+K+L++ 
Sbjct: 127 KADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIG 186

Query: 186 KRIEKLVAFPNGKEI 201
              +   A P G+ I
Sbjct: 187 ---DDPAALPKGQTI 198

[Close]

BLAST of Csor.00g092740 vs. ExPASy Swiss-Prot
Match: O49513 (Ras-related protein RABA1e OS=Arabidopsis thaliana OX=3702 GN=RABA1E PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 9.7e-62
Identity = 122/213 (57.28%), Postives = 162/213 (76.06%), Query Frame = 0


Query: 6   DEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKLIKTQI 65
           D++ DYLFK VL GDSGVGKSNLLSRF R EF ++SK TIGVEFA R++ V +K+IK Q+
Sbjct: 7   DDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQL 66

Query: 66  WDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVIVLVGN 125
           WDTAGQER+RAITS+YYRGA+GALLVYDITR +TFENV++WL+ELRD  ++++VI+LVGN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGN 126

Query: 126 KSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQKSLNLP 185
           K+DL H R V  EE R  +E E++FFMETSA+D  NVE+AF  ++ +I+ + S+K+L+  
Sbjct: 127 KADLRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKALD-- 186

Query: 186 KRIEKLVAFPNGKEI----VHEVTPTKPNSYCC 215
                 ++ P G+ I      +VT  K +S CC
Sbjct: 187 -GTGDPMSLPKGQTIDIGNKDDVTAVK-SSGCC 215

[Close]

BLAST of Csor.00g092740 vs. ExPASy Swiss-Prot
Match: Q1PEX3 (Ras-related protein RABA1h OS=Arabidopsis thaliana OX=3702 GN=RABA1H PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 9.7e-62
Identity = 117/195 (60.00%), Postives = 155/195 (79.49%), Query Frame = 0


Query: 6   DEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKLIKTQI 65
           +++ DYLFK VLTGDSGVGKSNLLSRF R +F  DS+ TIGVEFA R+I+V DK++K QI
Sbjct: 7   EDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQI 66

Query: 66  WDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVIVLVGN 125
           WDTAGQER+RAITS+YYRGA+GALLVYD+TR VTFENV++WL+ELRD  +++ VI+LVGN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGN 126

Query: 126 KSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQKSLNLP 185
           K+DL+H R +  EE +  AE E+ FFMETSA++ +NVE AF E++ +I+ + S+K+L+  
Sbjct: 127 KADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDAG 186

Query: 186 KRIEKLVAFPNGKEI 201
              +   A P G+ I
Sbjct: 187 D--DPTTALPKGQMI 199

[Close]

BLAST of Csor.00g092740 vs. NCBI nr
Match: XP_022933916.1 (ras-related protein RABA6b-like [Cucurbita moschata] >KAG6587682.1 Ras-related protein RABA6b, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 429 bits (1102), Expect = 2.29e-151
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60
           MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL
Sbjct: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120
           IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI
Sbjct: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120

Query: 121 VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180
           VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK
Sbjct: 121 VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180

Query: 181 SLNLPKRIEKLVAFPNGKEIVHEVTPTKPNSYCCYL 216
           SLNLPKRIEKLVAFPNGKEIVHEVTPTKPNSYCCYL
Sbjct: 181 SLNLPKRIEKLVAFPNGKEIVHEVTPTKPNSYCCYL 216

[Close]

BLAST of Csor.00g092740 vs. NCBI nr
Match: KAG7021646.1 (Ras-related protein RABA6b, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 427 bits (1097), Expect = 1.33e-150
Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60
           MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL
Sbjct: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120
           IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI
Sbjct: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120

Query: 121 VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180
           VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK
Sbjct: 121 VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180

Query: 181 SLNLPKRIEKLVAFPNGKEIVHEVTPTKPNSYCCYL 216
           SLNLPKRIEKLVAFPNGKEIVHEVTPTKPNS+CCYL
Sbjct: 181 SLNLPKRIEKLVAFPNGKEIVHEVTPTKPNSHCCYL 216

[Close]

BLAST of Csor.00g092740 vs. NCBI nr
Match: XP_023529393.1 (ras-related protein RABA6b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 421 bits (1081), Expect = 3.93e-148
Identity = 215/218 (98.62%), Postives = 215/218 (98.62%), Query Frame = 0


Query: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60
           MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL
Sbjct: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120
           IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI
Sbjct: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120

Query: 121 VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180
           VLVGNKSDLSHSREV EEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK
Sbjct: 121 VLVGNKSDLSHSREVEEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180

Query: 181 SLNLPKRIEKLVAFPNGKEIV--HEVTPTKPNSYCCYL 216
           SLNLPKRIEKLVAFPNGKEIV  HEVTPTKPNSYCCYL
Sbjct: 181 SLNLPKRIEKLVAFPNGKEIVSIHEVTPTKPNSYCCYL 218

[Close]

BLAST of Csor.00g092740 vs. NCBI nr
Match: XP_023003771.1 (ras-related protein RABA6a-like [Cucurbita maxima])

HSP 1 Score: 411 bits (1056), Expect = 2.54e-144
Identity = 210/218 (96.33%), Postives = 211/218 (96.79%), Query Frame = 0


Query: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60
           MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL
Sbjct: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120
           IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRA TFENVKKWLRELRDFGNSDMVI
Sbjct: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAATFENVKKWLRELRDFGNSDMVI 120

Query: 121 VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180
           VLVGNKSDL+HSREV EEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK
Sbjct: 121 VLVGNKSDLNHSREVEEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180

Query: 181 SLNLPKRIEKLVAFPNGKEIV--HEVTPTKPNSYCCYL 216
           SLNLPKRIEK VAFPNG EIV  HEVTPTKPNSYCC L
Sbjct: 181 SLNLPKRIEKFVAFPNGNEIVSIHEVTPTKPNSYCCSL 218

[Close]

BLAST of Csor.00g092740 vs. NCBI nr
Match: XP_022134689.1 (ras-related protein RABA6b [Momordica charantia])

HSP 1 Score: 379 bits (972), Expect = 1.62e-131
Identity = 189/218 (86.70%), Postives = 202/218 (92.66%), Query Frame = 0


Query: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60
           MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFA++EFRLDSKPTIGVEFAYRNIKVA KL
Sbjct: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFAKSEFRLDSKPTIGVEFAYRNIKVAGKL 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120
           IK QIWDTAGQERFRAITSSYYRGALGALLVYD+TR  TFENVKKWLRELR+FGNSDMVI
Sbjct: 61  IKAQIWDTAGQERFRAITSSYYRGALGALLVYDVTRVATFENVKKWLRELREFGNSDMVI 120

Query: 121 VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180
           +LVGNK DL HSREV EEEGR LAESE LFFMETSAM NVNVEE FL+MVRRIH IASQK
Sbjct: 121 ILVGNKCDLGHSREVQEEEGRLLAESESLFFMETSAMKNVNVEEVFLQMVRRIHEIASQK 180

Query: 181 SLNLPKRIEKLVAFPNGKEIV--HEVTPTKPNSYCCYL 216
           +L+LPK+IEKL AFPNGKEI+  H+VTPTKP+SYCC +
Sbjct: 181 ALDLPKQIEKLAAFPNGKEIISIHDVTPTKPDSYCCSI 218

[Close]

BLAST of Csor.00g092740 vs. ExPASy TrEMBL
Match: A0A6J1F0C2 (ras-related protein RABA6b-like OS=Cucurbita moschata OX=3662 GN=LOC111441184 PE=4 SV=1)

HSP 1 Score: 429 bits (1102), Expect = 1.11e-151
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60
           MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL
Sbjct: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120
           IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI
Sbjct: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120

Query: 121 VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180
           VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK
Sbjct: 121 VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180

Query: 181 SLNLPKRIEKLVAFPNGKEIVHEVTPTKPNSYCCYL 216
           SLNLPKRIEKLVAFPNGKEIVHEVTPTKPNSYCCYL
Sbjct: 181 SLNLPKRIEKLVAFPNGKEIVHEVTPTKPNSYCCYL 216

[Close]

BLAST of Csor.00g092740 vs. ExPASy TrEMBL
Match: A0A6J1KQ67 (ras-related protein RABA6a-like OS=Cucurbita maxima OX=3661 GN=LOC111497252 PE=4 SV=1)

HSP 1 Score: 411 bits (1056), Expect = 1.23e-144
Identity = 210/218 (96.33%), Postives = 211/218 (96.79%), Query Frame = 0


Query: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60
           MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL
Sbjct: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120
           IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRA TFENVKKWLRELRDFGNSDMVI
Sbjct: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAATFENVKKWLRELRDFGNSDMVI 120

Query: 121 VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180
           VLVGNKSDL+HSREV EEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK
Sbjct: 121 VLVGNKSDLNHSREVEEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180

Query: 181 SLNLPKRIEKLVAFPNGKEIV--HEVTPTKPNSYCCYL 216
           SLNLPKRIEK VAFPNG EIV  HEVTPTKPNSYCC L
Sbjct: 181 SLNLPKRIEKFVAFPNGNEIVSIHEVTPTKPNSYCCSL 218

[Close]

BLAST of Csor.00g092740 vs. ExPASy TrEMBL
Match: A0A6J1BZG6 (ras-related protein RABA6b OS=Momordica charantia OX=3673 GN=LOC111006897 PE=4 SV=1)

HSP 1 Score: 379 bits (972), Expect = 7.84e-132
Identity = 189/218 (86.70%), Postives = 202/218 (92.66%), Query Frame = 0


Query: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60
           MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFA++EFRLDSKPTIGVEFAYRNIKVA KL
Sbjct: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFAKSEFRLDSKPTIGVEFAYRNIKVAGKL 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120
           IK QIWDTAGQERFRAITSSYYRGALGALLVYD+TR  TFENVKKWLRELR+FGNSDMVI
Sbjct: 61  IKAQIWDTAGQERFRAITSSYYRGALGALLVYDVTRVATFENVKKWLRELREFGNSDMVI 120

Query: 121 VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180
           +LVGNK DL HSREV EEEGR LAESE LFFMETSAM NVNVEE FL+MVRRIH IASQK
Sbjct: 121 ILVGNKCDLGHSREVQEEEGRLLAESESLFFMETSAMKNVNVEEVFLQMVRRIHEIASQK 180

Query: 181 SLNLPKRIEKLVAFPNGKEIV--HEVTPTKPNSYCCYL 216
           +L+LPK+IEKL AFPNGKEI+  H+VTPTKP+SYCC +
Sbjct: 181 ALDLPKQIEKLAAFPNGKEIISIHDVTPTKPDSYCCSI 218

[Close]

BLAST of Csor.00g092740 vs. ExPASy TrEMBL
Match: A0A0A0LS89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025010 PE=4 SV=1)

HSP 1 Score: 360 bits (925), Expect = 1.14e-124
Identity = 181/218 (83.03%), Postives = 197/218 (90.37%), Query Frame = 0


Query: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60
           MADS DE+CDYLFKAVLTGDSGVGKSNLLSRF++ EFR DS+PTIGVEFAYRNIKVADKL
Sbjct: 1   MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120
           +KTQIWDTAGQERFRAITSSYYRGALGALLVYDITR  TF+N+KKWLRELR+FGN +MVI
Sbjct: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI 120

Query: 121 VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180
           +LVGNK DL  SREV EEE R LAE E+LFFMETSA DN+NVEEAFLEMVRRIHAIASQK
Sbjct: 121 ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180

Query: 181 SLNLPKRIEKLVAFPNGKEIV--HEVTPTKPNSYCCYL 216
           +L+L K+ EKLVAFPNGKEI+  HEVTPTK NS CC L
Sbjct: 181 TLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCCSL 218

[Close]

BLAST of Csor.00g092740 vs. ExPASy TrEMBL
Match: A0A1S3BWB9 (ras-related protein RABA6a-like OS=Cucumis melo OX=3656 GN=LOC103494177 PE=4 SV=1)

HSP 1 Score: 357 bits (915), Expect = 3.80e-123
Identity = 180/216 (83.33%), Postives = 194/216 (89.81%), Query Frame = 0


Query: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60
           MADS DEECDYLFKAVLTGDSGVGKSNLLSRF++ EFR DS+PTIGVEFAYRNIKVADKL
Sbjct: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120
           +KTQIWDTAGQERFRAITSSYYRGALGALLVYDITR  TF+N+KKWLRELR+FGN DMVI
Sbjct: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPDMVI 120

Query: 121 VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180
           +LVGNK DL  SREV EEE R LAE E+L FMETSA DN+NVEEAFLEMVRRIHAIASQK
Sbjct: 121 ILVGNKCDLHQSREVQEEEARHLAELENLLFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180

Query: 181 SLNLPKRIEKLVAFPNGKEIV--HEVTPTKPNSYCC 214
           +L+L K+I KLV FPNGKEI+  HEVTPTK NS CC
Sbjct: 181 TLDLHKKIVKLVDFPNGKEIISIHEVTPTKSNSNCC 216

[Close]

BLAST of Csor.00g092740 vs. TAIR 10
Match: AT1G18200.1 (RAB GTPase homolog A6B )

HSP 1 Score: 294.7 bits (753), Expect = 6.2e-80
Identity = 152/226 (67.26%), Postives = 177/226 (78.32%), Query Frame = 0


Query: 3   DSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKLIK 62
           +S+DEECDYLFKAVL GDS VGKSNLLSRF+R EFRLDSKPTIGV+FAYRN++V DK IK
Sbjct: 4   ESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIK 63

Query: 63  TQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVIVL 122
            QIWDTAGQERFRAITSSYYRGALGALL+YDITR +TF+N++KWL ELR F + + V+VL
Sbjct: 64  AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVL 123

Query: 123 VGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQKSL 182
           VGNKSDL  SREV EEEG+ LAESE L+F+ETSA++N NVEEAFL M+ RIH + +QK +
Sbjct: 124 VGNKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQK-I 183

Query: 183 NLPKRI-------EKLVAFPNGKEIV--HEVTPTKP----NSYCCY 216
            L  R+             P GKEIV  HEVT T+P     S CCY
Sbjct: 184 VLDNRLNGDGNNESNGAVVPPGKEIVNIHEVTATRPLSTSLSNCCY 228

[Close]

BLAST of Csor.00g092740 vs. TAIR 10
Match: AT1G73640.1 (RAB GTPase homolog A6A )

HSP 1 Score: 293.1 bits (749), Expect = 1.8e-79
Identity = 150/229 (65.50%), Postives = 176/229 (76.86%), Query Frame = 0


Query: 3   DSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKLIK 62
           D+++EECDYLFKAVL GDS VGKSNLLSRF++ EFR DSKPTIGVEFAYRN+ V DK+IK
Sbjct: 4   DTYEEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIK 63

Query: 63  TQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVIVL 122
            QIWDTAGQERFRAITSSYYRGALGALL+YDITR  TF+N+KKWL ELRDF N + V+VL
Sbjct: 64  AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVL 123

Query: 123 VGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQKSL 182
           VGNKSDL  SREV E+EG+ LAESE L+F+ETSA++NVNVEEAFL M+ RIH + +Q+  
Sbjct: 124 VGNKSDLRQSREVEEDEGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHEVVTQRIA 183

Query: 183 NLPKRIEKL----------VAFPNGKEIV--HEVTPTKP----NSYCCY 216
           +  K                  P GKEIV  HEVT T+P    +S CC+
Sbjct: 184 SENKSNGAATPHINGNGNGTVLPVGKEIVNIHEVTATQPLLSSSSNCCF 232

[Close]

BLAST of Csor.00g092740 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 241.9 bits (616), Expect = 4.8e-64
Identity = 119/195 (61.03%), Postives = 155/195 (79.49%), Query Frame = 0


Query: 6   DEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKLIKTQI 65
           D+E DYLFK VL GDSGVGKSNLLSRF R EF L+SK TIGVEFA R+I V DK++K QI
Sbjct: 7   DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQI 66

Query: 66  WDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVIVLVGN 125
           WDTAGQER+RAITS+YYRGA+GALLVYD+TR VTFENV++WL+ELRD  ++++VI+ VGN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGN 126

Query: 126 KSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQKSLNLP 185
           K+DL H R V  E+ +  AE E+ FFMETSA++++NVE AF E++ +I+ + S+K+L++ 
Sbjct: 127 KADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIG 186

Query: 186 KRIEKLVAFPNGKEI 201
              +   A P G+ I
Sbjct: 187 ---DDPAALPKGQTI 198

[Close]

BLAST of Csor.00g092740 vs. TAIR 10
Match: AT2G33870.1 (RAB GTPase homolog A1H )

HSP 1 Score: 238.0 bits (606), Expect = 6.9e-63
Identity = 117/195 (60.00%), Postives = 155/195 (79.49%), Query Frame = 0


Query: 6   DEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKLIKTQI 65
           +++ DYLFK VLTGDSGVGKSNLLSRF R +F  DS+ TIGVEFA R+I+V DK++K QI
Sbjct: 7   EDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQI 66

Query: 66  WDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVIVLVGN 125
           WDTAGQER+RAITS+YYRGA+GALLVYD+TR VTFENV++WL+ELRD  +++ VI+LVGN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGN 126

Query: 126 KSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQKSLNLP 185
           K+DL+H R +  EE +  AE E+ FFMETSA++ +NVE AF E++ +I+ + S+K+L+  
Sbjct: 127 KADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDAG 186

Query: 186 KRIEKLVAFPNGKEI 201
              +   A P G+ I
Sbjct: 187 D--DPTTALPKGQMI 199

[Close]

BLAST of Csor.00g092740 vs. TAIR 10
Match: AT4G18430.1 (RAB GTPase homolog A1E )

HSP 1 Score: 238.0 bits (606), Expect = 6.9e-63
Identity = 122/213 (57.28%), Postives = 162/213 (76.06%), Query Frame = 0


Query: 6   DEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKLIKTQI 65
           D++ DYLFK VL GDSGVGKSNLLSRF R EF ++SK TIGVEFA R++ V +K+IK Q+
Sbjct: 7   DDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQL 66

Query: 66  WDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVIVLVGN 125
           WDTAGQER+RAITS+YYRGA+GALLVYDITR +TFENV++WL+ELRD  ++++VI+LVGN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGN 126

Query: 126 KSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQKSLNLP 185
           K+DL H R V  EE R  +E E++FFMETSA+D  NVE+AF  ++ +I+ + S+K+L+  
Sbjct: 127 KADLRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKALD-- 186

Query: 186 KRIEKLVAFPNGKEI----VHEVTPTKPNSYCC 215
                 ++ P G+ I      +VT  K +S CC
Sbjct: 187 -GTGDPMSLPKGQTIDIGNKDDVTAVK-SSGCC 215

The following BLAST results are available for this feature:

BLAST of Csor.00g092740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WQN4	8.7e-79	67.26	Ras-related protein RABA6b OS=Arabidopsis thaliana OX=3702 GN=RABA6B PE=2 SV=2	[more]
Q9C9U7	2.5e-78	65.50	Ras-related protein RABA6a OS=Arabidopsis thaliana OX=3702 GN=RABA6A PE=2 SV=1	[more]
Q9FJH0	6.7e-63	61.03	Ras-related protein RABA1f OS=Arabidopsis thaliana OX=3702 GN=RABA1F PE=2 SV=1	[more]
O49513	9.7e-62	57.28	Ras-related protein RABA1e OS=Arabidopsis thaliana OX=3702 GN=RABA1E PE=2 SV=1	[more]
Q1PEX3	9.7e-62	60.00	Ras-related protein RABA1h OS=Arabidopsis thaliana OX=3702 GN=RABA1H PE=2 SV=1	[more]

BLAST of Csor.00g092740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933916.1	2.29e-151	100.00	ras-related protein RABA6b-like [Cucurbita moschata] >KAG6587682.1 Ras-related p...	[more]
KAG7021646.1	1.33e-150	99.54	Ras-related protein RABA6b, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023529393.1	3.93e-148	98.62	ras-related protein RABA6b-like [Cucurbita pepo subsp. pepo]	[more]
XP_023003771.1	2.54e-144	96.33	ras-related protein RABA6a-like [Cucurbita maxima]	[more]
XP_022134689.1	1.62e-131	86.70	ras-related protein RABA6b [Momordica charantia]	[more]

BLAST of Csor.00g092740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F0C2	1.11e-151	100.00	ras-related protein RABA6b-like OS=Cucurbita moschata OX=3662 GN=LOC111441184 PE...	[more]
A0A6J1KQ67	1.23e-144	96.33	ras-related protein RABA6a-like OS=Cucurbita maxima OX=3661 GN=LOC111497252 PE=4...	[more]
A0A6J1BZG6	7.84e-132	86.70	ras-related protein RABA6b OS=Momordica charantia OX=3673 GN=LOC111006897 PE=4 S...	[more]
A0A0A0LS89	1.14e-124	83.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025010 PE=4 SV=1	[more]
A0A1S3BWB9	3.80e-123	83.33	ras-related protein RABA6a-like OS=Cucumis melo OX=3656 GN=LOC103494177 PE=4 SV=...	[more]

BLAST of Csor.00g092740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18200.1	6.2e-80	67.26	RAB GTPase homolog A6B	[more]
AT1G73640.1	1.8e-79	65.50	RAB GTPase homolog A6A	[more]
AT5G60860.1	4.8e-64	61.03	RAB GTPase homolog A1F	[more]
AT2G33870.1	6.9e-63	60.00	RAB GTPase homolog A1H	[more]
AT4G18430.1	6.9e-63	57.28	RAB GTPase homolog A1E	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 151..173 score: 43.6 coord: 116..129 score: 53.15 coord: 13..34 score: 52.06 coord: 36..52 score: 35.27 coord: 54..76 score: 50.33
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 13..176 e-value: 4.2E-100 score: 348.6
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 10..176 e-value: 2.5E-28 score: 110.1
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 18..216 e-value: 5.8E-9 score: 45.8
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 3..215
None	No IPR available	PANTHER	PTHR47979:SF52	RAS-RELATED PROTEIN RABA6B	coord: 3..215
None	No IPR available	PROSITE	PS51420	RHO	coord: 6..175 score: 9.063164
None	No IPR available	PROSITE	PS51419	RAB	coord: 8..214 score: 32.776997
None	No IPR available	CDD	cd01868	Rab11_like	coord: 10..174 e-value: 4.13838E-109 score: 308.335
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 15..176 e-value: 2.7E-10 score: 12.7
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 14..174 e-value: 1.0E-58 score: 197.5
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 4..216 score: 17.475725
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..167 e-value: 4.3E-31 score: 105.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 5..214 e-value: 3.5E-67 score: 227.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 8..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g092740.m01	Csor.00g092740.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0005768	endosome
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding