Csor.00g092550 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g092550
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	tRNA pseudouridine synthase
Location	Csor_Chr11: 1686512 .. 1692109 (-)
RNA-Seq Expression	Csor.00g092550
Synteny	Csor.00g092550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCTCGGCCATATTGGGCGCATACCTTGATGGGCTCGGCCATATTGGGCTTTCCCGGTTGGATGAATATGGGCTTGCTCTCTTACATCTGCTTGACTGCAACGTCTACGTGGATTTACATTATCGTCCCTGCCGCGCCGGCGGCTGCAACTGCAAAATACAGTCGTCCGCTCAGGTTGGGTGGTGCGGTGGTTATGATACCAAATCCAAGGGCTATACTGCTATCATCATCAGGTGCCGGTTTCGGTTTCGGTATTAAGTGTCTAATGGAGAATCGAGCTCAGAAAAAGGACTATCTTCACTATAACCACACTGATCGTTGCAGAAATGCCCGATGGACTTCCAGGTTTTACTTTCGTACATTTTTCGTTATCTATTGCTTGAATCGATTTGAAATTTTCCGTGAGGTACTTCGAATCGGATTCTGTATCTGCGAGAGGTTCGCTTTTGTTTGTAGTAATTCAATCTGAATCTGAGAAGGTTGTCAATCAAGATGTTGTATGCTTTTGGCAGGGAAAGCTACCAATTCATGTATGAAAGGCCGTGGCAAGAAGTGCTTGATTTTTACTCTCATGCTGTTAATGGAAGATTATCACTGTCCTCGCTTGGAACTGAGGTGGGTATCCAATATCAACGATTTCTATAAACTTATTTTCATTTGCAAACTTGTTGCCTCTTTATTTATGACTCTTCCATTTCTTAAGATGAAAGCAATGGAATTGTGAACTAGGAATCTTTTTTCCCTCCCTTGCGACCATGTGAATCTCTCTCTCTCTCTCTCTCTCTCGTGATGCTAACTCTAAGAATGAGCTTTATATATCTAATGCTGCTTACATTGTAATGTTGTATCAGCATGAGTTACTTTCGTTTACTCCAAGCAATGCGGTTCCATGAGTAGTTAAAAACAATCATGAATCCTCCTCCTGCAACCTAAAATAGTAGGGAAAAGAGCGAGGATAATGTAATTGTTGTACGACTTTGTAAATCCTGGATTTCTTTTTGTTCAGGTTCTCTGGTTCTTACTTTAATATTTGCTTTAGTACTAATTTTTTCATGGATTCTCAGTTTTAGAGATGAGTTTTAATCAAATCCTTGCTATCGATTCTTACATTTGATTTAGTGATCGGCTTCATGTTTTTTTAGAAAATCTTGTTTTATAAATTCCATTGGTTGATTACAATTAGAAAAAATGAGGATGAAAATTTTGTTCTTTAATTTATCTTTCTGTATAAAACAAGAAGATATCATTTATTTATTTATAGTTTTTAGTACTTTATCCACAGACAGTTCGTGATCATGATGATACTGAGATTCAACCGGTTTGCAACACTGCAGAGTTAGACAGAGCTCCGGTTAAAGATGGGACTGGGAGGTGGGCAAGGGCAACATTTAAGATTGTTCTTTCCTACCATGGAAATTCTTTTGATGGATGGCAAAAGCAGCCAGATTTGAATACTGTTCAGGGGTAAGCATGTATCAAGAAAATGTGAACCATATGCCAAGTAATATACATACGCAATTGGGAGCTTTTGAAGCTAGCAATGTTCTTTTCATTATGAAGTCTTAATAAAAAAAATTCGTAAGTATTTGTAAGTTTTAGATAATGTTTGAGAAGCTAGTTCTAGAGATACAATTGAGGAATCTTTTTTTGTGGAGAATTGAGTGCTAGAGATAGAATTGAAAATCCAATGCCTCCAGTTCAAGTGAAACATTCCTCTTGAGTTCATTGTCCAAATTTGGTCAACCAACCTTACTAATCTCACTTTTCCTTTAATCGTATCTCCTTCTTCTAGTATAATAGCTTAAAGTAGTATTTTAATACCTTTTGATGCATAAATAGTTTGATTGCAATCTAGAAATGAAAAGCACTCCTGTATATTATATGATTATTTCTACTTGTATCCTTTGGCAGTGTGGTGGAAAAATCTCTTGGGAAATTTGTAGATGAGAAAAAAGCTCAGCAGCTGAAAGATAGATGCTTACCGATAGAAGGATGTGCTGTGGTTGCTGGGCGCACTGACAAAGGGGTGACAGCTTTGCGACAAGTTTGCTCATTCTGTATGTTAGTTTTTAATCTTTATTGACATGACTTTTTTGCTTGTTTAGATATTTAATTCCACAACTCTGTTATATTTTTCTTAGATTTTATCTCATCTAAAAAATGAAGTCTTATATTAGAATAAACTTTATCTTCTATATTATTTCTTGACATCTTTGGTAATTGTTGAAAGTAAGTAGTATTAAAACAGGCATGGTGTATAGTCTGTTTAGTATAATCATAGCTCTTTTATTGATTAAGGTCTCATAAAACTTTCCTTTTTAAATAATCGGTAGGAGGTGCTACACTGGAACTAAGCCAGGGAATAACTTTCCCATAAAAAGTAGCCAGAGTTAAAAAAAAAAAAAAAAAAAAAACGGCCGTACTGTGCTCACTGTAGTTTAACTAGGCCGATCTTTAGTTGCATATTGCTTAGAAGACTTGACCAAGATACCCATCACCGGTTATTAACTCATCTGCCATGGGACTTGGGAGTGCACTTCTTTTTACCATTTGCAGAGTTCCTTATCTGATGCTATATGAAAGGCAAGTTGGTGAAGAAGATTGAAGTTTTTGTTTCAATTATTTCCAATCTGGACCTCAACAACGACAATAGAATTCAAGCTAGGCATAAAAAATACTTGAGCATCACAATACCAATAATATAATTCAAGCTGAACCATGCTTCCTTTGGTTTGAGTTCTTTAACATAAATTTATACATGTGAAATTGTTTAGAAAAACACAATTAATATATGAAGTATTTGAGTTATTTTGGTTGGAGCGTAATTGCCGGATATTCGAGGACAAAGCTACTAATTTTGATTCAGTTTTCAAACACCTTACTTACCTTGCTCTCTTAGTGTAAATTCTCCTCTCATTTCCATGATTATAGGCTTTCATCTCTCATTATCCAATGGAAATGTTTTTTTGATTCCTCTGGCACATTTTTTGTCCTTTTGTAATTTCATCTCTTCAATGAAATGAGGGAAGCTATGTTCCTCATAAAAAGAAAAAAAGAAAAAGAGTTGTAGCAATTTCTTTCCTTCATTGGTTTCAAATTTCCATTGGAAGGGAAAACGATTCTCTTTCTGACTTCACTCACTTAATTATTAATGTTCTATTTTAGAGATGCAATATCTGACTAAACTCCAATCACTTGTAGATACTTGGCGCACAGATGTTAAACCTCAAGACATTGAAGGTTCCATCAATAATGCAGCTCCGGGAAAACTCAGAGTCTTATCTGTTTCTCAGGTAATATTAAGGATTTGTTTTATTTTTTTATATTTTTTTTATGAAAATGTGTCATTGGAATGAACGTGATGCTCCGGTGTCTAGCTTTAATATTGTTGCAGAACTGAGTGGTTTTATTATCTTTCTACTTTTCTTGTCTCTATCTTTCAGATACATTATACATGTAACTTCTCATATCACTTTCTGCTGTAGGTGTCTCGTATGTTCCATCCAAACTTCTCTGCTAAATGGAGGCGATATCTGTATATTTTTCCTCTGAAAGACGGAGAGAAGATGGAGCCAAATTTTGCAATTTGGGAAGATGTAGAAAACAGTAGAGAAGAGGAACATCGTGATAAAATAGAAGCTTTACATGGTGAATGCAAGGATGAGATCCTGAATAATTTGGTCCTCAGTCAGGATGATGAGGAGCCTGCATTAGCTAATAAGCCTCAAACATTTAGTATAATGAGGGTTAACCAACTACTAAGGAAACTAGAAGGAAAGTTATTGTCATACAAGATGTTTGCACGTGACACCAAAGCATCTAGAAACGAGTGAGAATCATGAATTGAATAAATTATTGGTTTTTTTTCCTCTTTTTTTTTTAGTTGTTCTAGCGTCAAGTTTGATTATCATTGTTCCTCCCCCCCCCGCTCATAAAGGCTATTGTCACTTTCCTTCTTATTCTGCTCATAAAGCCTATCTACGTTTTCCTTCTTATTCCGTTGGTCACTCTTTTGAATTCTTTTAGAAGCTATTTATAGGAATATGAAATGGATGAATCCAGTCTATATGTTCTTTTGTGGGATCTGTGGATAGAAAGGAACATGATTTGTTCTCTCATAAAAATAAGGAAAGGAGGAGAGATGGGCAATGTTAAATTTGTAAGCAGTTGAGCCTAAGTTAAGGGCTGTTTGGAGTGTCTTTCCTAGTGCTTAAAACACTTCTTTAAGCACTTAGAAATCCTCCCAAGCCGGCTCTTAGTTATATAGTTTATCAGTTGAGAATTTTTTGTTTGTGTTATCATGAGATGAATGTGCGTGTAGATATGATCAGGATAGCTAGTCTGCAGATCGACTAAACAAAGTTAGTAATACAATTTGTCAATCGAGAACTTTTTGTTTGTGTCAACGTGAGATTAATATGCTTGCTTGTAGCTTTCCTTTTCCCAAATGTTTTCTTATCAATGATAGGATGAGGTTCGGATCTTTTTGACATGTACTAATGGTGACTTTCCTCCTTTTCAGAGGTCCACCCACGGAGTGTTTTGTATACCATGCCCGCGCAATGGAAGCTAGATTACCATGCTTGGTATCCACTTGTGGTCCCTTCATGCTCTCGACCTCCTTTTCTTTGATTATCTTTTTCCTTCCTCCCCTTCTTGAAATCTCTTTGTGGAGTTGTAACTGTAAAACATTATTCTATGCTCACTTACACTAAAAAAAGGTAGAAACTTGTTTTTTGCCTTGTGTTCTTGTTTTTTGCCTTGTGTTTTCCACTGGTTGAGAACATAGAGAACTGAAGATGAATTAGTGGAGAAGTGAGTGTGAGTCGAGGAGACATAGAATCTGTGGAAAATTATTTCAAAGCAAACGAGTCCAAGTATGAGCTCGATCCAATGCAAATTAAAATTTTATTGACAAGGGTTGCATTCTCTTCTGTCAGTATCTTAATTTGGATAACCTTAGACAAATTCTGTTCCTTTCTGATCATACATACTTGTATATTTATTTGTTTATCCATGTCTTAATACTCCAACAAAACTAGTGACGTGCTCTTGAATAACCCTATTCCGAATTTAGAGATCTAAGTGGTAGCGTTGTATTGACAGGACCAAGGCGTAGGAAGAAGTGTTATGTGTGTTGAGCTGGTTGCTAATCGCTTCTTGAGGAAGGTAACATCTCCAGGGTTAATTATGCTAATGGTAATATTGTACTGAACGTAAAATTGGCCTTATTTAGATCCAACCTTTTCACCAACTGCTCAAACTTAAGCGTAAGCATTGGAATTTCCCCTCAGTTATAGCAATGTTATACAACCATAAGGCTCCTTCATATTTTGATGGCACTAATTATCGTCTTCGGTTGAATACTACCAATTATAAAGGAATCTAATCATGACCTTGCAGATGGTGCGGGTGCTTGTTGCAACAGCAATTAGAGAGGCAGCTGCTGGTGCTGGAGAGGATGCGTTACTAAAGCTGATGGATGCCACATGTCGACGTGCCACTGCACCTCCTGCGCCTCCTGATGGCCTCAGTCTCGTTGATGTAGGTTATACAGAATTTGATCCACAAAATTGCTTCATATTAAATGACTAA

mRNA sequence

ATGGGCTCGGCCATATTGGGCGCATACCTTGATGGGCTCGGCCATATTGGGCTTTCCCGGTTGGATGAATATGGGCTTGCTCTCTTACATCTGCTTGACTGCAACGTCTACGTGGATTTACATTATCGTCCCTGCCGCGCCGGCGGCTGCAACTGCAAAATACAGTCGTCCGCTCAGGTTGGGTGGTGCGGTGGTTATGATACCAAATCCAAGGGCTATACTGCTATCATCATCAGAAATGCCCGATGGACTTCCAGGGAAAGCTACCAATTCATGTATGAAAGGCCGTGGCAAGAAGTGCTTGATTTTTACTCTCATGCTGTTAATGGAAGATTATCACTGTCCTCGCTTGGAACTGAGACAGTTCGTGATCATGATGATACTGAGATTCAACCGGTTTGCAACACTGCAGAGTTAGACAGAGCTCCGGTTAAAGATGGGACTGGGAGGTGGGCAAGGGCAACATTTAAGATTGTTCTTTCCTACCATGGAAATTCTTTTGATGGATGGCAAAAGCAGCCAGATTTGAATACTGTTCAGGGTGTGGTGGAAAAATCTCTTGGGAAATTTGTAGATGAGAAAAAAGCTCAGCAGCTGAAAGATAGATGCTTACCGATAGAAGGATGTGCTGTGGTTGCTGGGCGCACTGACAAAGGGGTGACAGCTTTGCGACAAGTTTGCTCATTCTATACTTGGCGCACAGATGTTAAACCTCAAGACATTGAAGGTTCCATCAATAATGCAGCTCCGGGAAAACTCAGAGTCTTATCTGTTTCTCAGGTGTCTCGTATGTTCCATCCAAACTTCTCTGCTAAATGGAGGCGATATCTGTATATTTTTCCTCTGAAAGACGGAGAGAAGATGGAGCCAAATTTTGCAATTTGGGAAGATGTAGAAAACAGTAGAGAAGAGGAACATCGTGATAAAATAGAAGCTTTACATGGTGAATGCAAGGATGAGATCCTGAATAATTTGGTCCTCAGTCAGGATGATGAGGAGCCTGCATTAGCTAATAAGCCTCAAACATTTAGTATAATGAGGGTTAACCAACTACTAAGGAAACTAGAAGGAAAGTTATTGTCATACAAGATGTTTGCACGTGACACCAAAGCATCTAGAAACGAAGGTCCACCCACGGAGTGTTTTGTATACCATGCCCGCGCAATGGAAGCTAGATTACCATGCTTGGACCAAGGCGTAGGAAGAAGTGTTATGTGTGTTGAGCTGGTTGCTAATCGCTTCTTGAGGAAGATGGTGCGGGTGCTTGTTGCAACAGCAATTAGAGAGGCAGCTGCTGGTGCTGGAGAGGATGCGTTACTAAAGCTGATGGATGCCACATGTCGACGTGCCACTGCACCTCCTGCGCCTCCTGATGGCCTCAGTCTCGTTGATGTAGGTTATACAGAATTTGATCCACAAAATTGCTTCATATTAAATGACTAA

Coding sequence (CDS)

ATGGGCTCGGCCATATTGGGCGCATACCTTGATGGGCTCGGCCATATTGGGCTTTCCCGGTTGGATGAATATGGGCTTGCTCTCTTACATCTGCTTGACTGCAACGTCTACGTGGATTTACATTATCGTCCCTGCCGCGCCGGCGGCTGCAACTGCAAAATACAGTCGTCCGCTCAGGTTGGGTGGTGCGGTGGTTATGATACCAAATCCAAGGGCTATACTGCTATCATCATCAGAAATGCCCGATGGACTTCCAGGGAAAGCTACCAATTCATGTATGAAAGGCCGTGGCAAGAAGTGCTTGATTTTTACTCTCATGCTGTTAATGGAAGATTATCACTGTCCTCGCTTGGAACTGAGACAGTTCGTGATCATGATGATACTGAGATTCAACCGGTTTGCAACACTGCAGAGTTAGACAGAGCTCCGGTTAAAGATGGGACTGGGAGGTGGGCAAGGGCAACATTTAAGATTGTTCTTTCCTACCATGGAAATTCTTTTGATGGATGGCAAAAGCAGCCAGATTTGAATACTGTTCAGGGTGTGGTGGAAAAATCTCTTGGGAAATTTGTAGATGAGAAAAAAGCTCAGCAGCTGAAAGATAGATGCTTACCGATAGAAGGATGTGCTGTGGTTGCTGGGCGCACTGACAAAGGGGTGACAGCTTTGCGACAAGTTTGCTCATTCTATACTTGGCGCACAGATGTTAAACCTCAAGACATTGAAGGTTCCATCAATAATGCAGCTCCGGGAAAACTCAGAGTCTTATCTGTTTCTCAGGTGTCTCGTATGTTCCATCCAAACTTCTCTGCTAAATGGAGGCGATATCTGTATATTTTTCCTCTGAAAGACGGAGAGAAGATGGAGCCAAATTTTGCAATTTGGGAAGATGTAGAAAACAGTAGAGAAGAGGAACATCGTGATAAAATAGAAGCTTTACATGGTGAATGCAAGGATGAGATCCTGAATAATTTGGTCCTCAGTCAGGATGATGAGGAGCCTGCATTAGCTAATAAGCCTCAAACATTTAGTATAATGAGGGTTAACCAACTACTAAGGAAACTAGAAGGAAAGTTATTGTCATACAAGATGTTTGCACGTGACACCAAAGCATCTAGAAACGAAGGTCCACCCACGGAGTGTTTTGTATACCATGCCCGCGCAATGGAAGCTAGATTACCATGCTTGGACCAAGGCGTAGGAAGAAGTGTTATGTGTGTTGAGCTGGTTGCTAATCGCTTCTTGAGGAAGATGGTGCGGGTGCTTGTTGCAACAGCAATTAGAGAGGCAGCTGCTGGTGCTGGAGAGGATGCGTTACTAAAGCTGATGGATGCCACATGTCGACGTGCCACTGCACCTCCTGCGCCTCCTGATGGCCTCAGTCTCGTTGATGTAGGTTATACAGAATTTGATCCACAAAATTGCTTCATATTAAATGACTAA

Protein sequence

MGSAILGAYLDGLGHIGLSRLDEYGLALLHLLDCNVYVDLHYRPCRAGGCNCKIQSSAQVGWCGGYDTKSKGYTAIIIRNARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSLGTETVRDHDDTEIQPVCNTAELDRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQPDLNTVQGVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWRRYLYIFPLKDGEKMEPNFAIWEDVENSREEEHRDKIEALHGECKDEILNNLVLSQDDEEPALANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFILND

Homology

[Close]

BLAST of Csor.00g092550 vs. ExPASy Swiss-Prot
Match: B3WAI6 (tRNA pseudouridine synthase A OS=Lactobacillus casei (strain BL23) OX=543734 GN=truA PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 3.7e-13
Identity = 44/123 (35.77%), Postives = 69/123 (56.10%), Query Frame = 0


Query: 156 FKIVLSYHGNSFDGWQKQPDLNTVQGVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAGR 215
           +K+ L+Y G +F G+Q QP   TVQGV++K+L K          K + + ++G    +GR
Sbjct: 4   YKVTLAYDGTNFAGYQVQPKQRTVQGVLQKALTKMT--------KGQPVHVDG----SGR 63

Query: 216 TDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWRR 275
           TD GV AL QV SF  +  ++  + +  ++N+  P  + +L    V   FH  +SAK +R
Sbjct: 64  TDSGVHALGQVISF-DYPGNIPAESMLKAMNSLMPLDIEILKAEIVDADFHARYSAKGKR 113

Query: 276 YLY 279
           YLY
Sbjct: 124 YLY 113

[Close]

BLAST of Csor.00g092550 vs. ExPASy Swiss-Prot
Match: Q035B5 (tRNA pseudouridine synthase A OS=Lactobacillus paracasei (strain ATCC 334 / BCRC 17002 / CIP 107868 / KCTC 3260 / NRRL B-441) OX=321967 GN=truA PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 3.7e-13
Identity = 44/123 (35.77%), Postives = 69/123 (56.10%), Query Frame = 0


Query: 156 FKIVLSYHGNSFDGWQKQPDLNTVQGVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAGR 215
           +K+ L+Y G +F G+Q QP   TVQGV++K+L K          K + + ++G    +GR
Sbjct: 4   YKVTLAYDGTNFAGYQVQPKQRTVQGVLQKALTKMT--------KGQPVHVDG----SGR 63

Query: 216 TDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWRR 275
           TD GV AL QV SF  +  ++  + +  ++N+  P  + +L    V   FH  +SAK +R
Sbjct: 64  TDSGVHALGQVISF-DYPGNIPAESMLKAMNSLMPLDIEILKAEIVDADFHARYSAKGKR 113

Query: 276 YLY 279
           YLY
Sbjct: 124 YLY 113

[Close]

BLAST of Csor.00g092550 vs. ExPASy Swiss-Prot
Match: Q73KE3 (tRNA pseudouridine synthase A OS=Treponema denticola (strain ATCC 35405 / DSM 14222 / CIP 103919 / JCM 8153 / KCTC 15104) OX=243275 GN=truA PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 3.7e-13
Identity = 80/318 (25.16%), Postives = 124/318 (38.99%), Query Frame = 0


Query: 158 IVLSYHGNSFDGWQKQ-----PDLNTVQGVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVV 217
           + +SY G +F GWQKQ         TVQG +EK+L K               PIE     
Sbjct: 12  LTISYDGTNFCGWQKQTKEGAETFRTVQGELEKALTKIHKH-----------PIETNG-- 71

Query: 218 AGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSVSQVSRMFHPNFSAK 277
           +GRTD GV A RQ  +F+     ++  +   ++N+  P  +RV+  ++VS + H  F+A 
Sbjct: 72  SGRTDSGVHAARQAVNFFCDIKSMRASNFLPALNSILPKDIRVMDAAEVSPLLHARFNAL 131

Query: 278 WRRYLYIFPLKDGEKMEPNFAIWEDVENSREEEHRDKIEALHGECKDEILNNLVLSQDDE 337
            R Y Y   +K G+ +   FA                                      E
Sbjct: 132 SRTYRY--KIKCGKTI---FA-------------------------------------HE 191

Query: 338 EPALANKPQTFSIMRVNQLLRKLEGKL-LSYKMFARDTKASRNEGPPTECFVYHARAMEA 397
           +P   +  +   I  +N++   L G+L  +    A D   S++       F         
Sbjct: 192 QPYTWHIRRYPDIAALNEMASCLSGELDCTAFSAAGDQSISKSRYIKKAVFF-------- 251

Query: 398 RLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLKLMDATCRRAT 457
                   +    +  E+ AN FL KMVR +V T +     GA +     ++++  R   
Sbjct: 252 --------IENDYLIFEICANAFLWKMVRSIVGTLLHLDEIGASKKDFKDILESKMREKA 258

Query: 458 APPAPPDGLSLVDVGYTE 470
            P APP GL L  + Y E
Sbjct: 312 GPTAPPQGLFLWSIEYPE 258

[Close]

BLAST of Csor.00g092550 vs. ExPASy Swiss-Prot
Match: B0SC03 (tRNA pseudouridine synthase A OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) OX=355278 GN=truA PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 4.9e-13
Identity = 44/123 (35.77%), Postives = 61/123 (49.59%), Query Frame = 0


Query: 156 FKIVLSYHGNSFDGWQKQPDLNTVQGVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAGR 215
           + +++ Y G  F+GWQKQ +L TVQ  +E +LG  +    A +L            VAGR
Sbjct: 4   YALLVEYDGTHFNGWQKQKNLPTVQSSIESALGIILRRNPASRLS-----------VAGR 63

Query: 216 TDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWRR 275
           TD GV AL  VC+F T         +  S+N   P  + V +V +V   FH  FS   R 
Sbjct: 64  TDTGVHALGMVCNFKTEHPIPNFHKLLVSLNALTPTGVSVKNVVEVPSDFHARFSCTGRE 115

Query: 276 YLY 279
           Y+Y
Sbjct: 124 YIY 115

[Close]

BLAST of Csor.00g092550 vs. ExPASy Swiss-Prot
Match: B0SJC4 (tRNA pseudouridine synthase A OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) OX=456481 GN=truA PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 4.9e-13
Identity = 44/123 (35.77%), Postives = 61/123 (49.59%), Query Frame = 0


Query: 156 FKIVLSYHGNSFDGWQKQPDLNTVQGVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAGR 215
           + +++ Y G  F+GWQKQ +L TVQ  +E +LG  +    A +L            VAGR
Sbjct: 4   YALLVEYDGTHFNGWQKQKNLPTVQSSIESALGIILRRNPASRLS-----------VAGR 63

Query: 216 TDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWRR 275
           TD GV AL  VC+F T         +  S+N   P  + V +V +V   FH  FS   R 
Sbjct: 64  TDTGVHALGMVCNFKTEHPIPNFHKLLVSLNALTPTGVSVKNVVEVPSDFHARFSCTGRE 115

Query: 276 YLY 279
           Y+Y
Sbjct: 124 YIY 115

[Close]

BLAST of Csor.00g092550 vs. NCBI nr
Match: KAG6587701.1 (hypothetical protein SDJN03_16266, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 981 bits (2536), Expect = 0.0
Identity = 480/480 (100.00%), Postives = 480/480 (100.00%), Query Frame = 0


Query: 1   MGSAILGAYLDGLGHIGLSRLDEYGLALLHLLDCNVYVDLHYRPCRAGGCNCKIQSSAQV 60
           MGSAILGAYLDGLGHIGLSRLDEYGLALLHLLDCNVYVDLHYRPCRAGGCNCKIQSSAQV
Sbjct: 1   MGSAILGAYLDGLGHIGLSRLDEYGLALLHLLDCNVYVDLHYRPCRAGGCNCKIQSSAQV 60

Query: 61  GWCGGYDTKSKGYTAIIIRNARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSLGTE 120
           GWCGGYDTKSKGYTAIIIRNARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSLGTE
Sbjct: 61  GWCGGYDTKSKGYTAIIIRNARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSLGTE 120

Query: 121 TVRDHDDTEIQPVCNTAELDRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQPDLNTVQ 180
           TVRDHDDTEIQPVCNTAELDRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQPDLNTVQ
Sbjct: 121 TVRDHDDTEIQPVCNTAELDRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQPDLNTVQ 180

Query: 181 GVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQD 240
           GVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQD
Sbjct: 181 GVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQD 240

Query: 241 IEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWRRYLYIFPLKDGEKMEPNFAIWEDVEN 300
           IEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWRRYLYIFPLKDGEKMEPNFAIWEDVEN
Sbjct: 241 IEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWRRYLYIFPLKDGEKMEPNFAIWEDVEN 300

Query: 301 SREEEHRDKIEALHGECKDEILNNLVLSQDDEEPALANKPQTFSIMRVNQLLRKLEGKLL 360
           SREEEHRDKIEALHGECKDEILNNLVLSQDDEEPALANKPQTFSIMRVNQLLRKLEGKLL
Sbjct: 301 SREEEHRDKIEALHGECKDEILNNLVLSQDDEEPALANKPQTFSIMRVNQLLRKLEGKLL 360

Query: 361 SYKMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVR 420
           SYKMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVR
Sbjct: 361 SYKMFARDTKASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVR 420

Query: 421 VLVATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFILND 480
           VLVATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFILND
Sbjct: 421 VLVATAIREAAAGAGEDALLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFILND 480

[Close]

BLAST of Csor.00g092550 vs. NCBI nr
Match: KAG7021669.1 (truA, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 817 bits (2110), Expect = 5.27e-296
Identity = 402/402 (100.00%), Postives = 402/402 (100.00%), Query Frame = 0


Query: 79  RNARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSLGTETVRDHDDTEIQPVCNTAE 138
           RNARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSLGTETVRDHDDTEIQPVCNTAE
Sbjct: 86  RNARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSLGTETVRDHDDTEIQPVCNTAE 145

Query: 139 LDRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQPDLNTVQGVVEKSLGKFVDEKKAQQ 198
           LDRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQPDLNTVQGVVEKSLGKFVDEKKAQQ
Sbjct: 146 LDRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQPDLNTVQGVVEKSLGKFVDEKKAQQ 205

Query: 199 LKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSV 258
           LKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSV
Sbjct: 206 LKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSV 265

Query: 259 SQVSRMFHPNFSAKWRRYLYIFPLKDGEKMEPNFAIWEDVENSREEEHRDKIEALHGECK 318
           SQVSRMFHPNFSAKWRRYLYIFPLKDGEKMEPNFAIWEDVENSREEEHRDKIEALHGECK
Sbjct: 266 SQVSRMFHPNFSAKWRRYLYIFPLKDGEKMEPNFAIWEDVENSREEEHRDKIEALHGECK 325

Query: 319 DEILNNLVLSQDDEEPALANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPP 378
           DEILNNLVLSQDDEEPALANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPP
Sbjct: 326 DEILNNLVLSQDDEEPALANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPP 385

Query: 379 TECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA 438
           TECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA
Sbjct: 386 TECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA 445

Query: 439 LLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFILND 480
           LLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFILND
Sbjct: 446 LLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFILND 487

[Close]

BLAST of Csor.00g092550 vs. NCBI nr
Match: XP_022933289.1 (uncharacterized protein LOC111440432 isoform X1 [Cucurbita moschata])

HSP 1 Score: 804 bits (2077), Expect = 1.15e-291
Identity = 396/402 (98.51%), Postives = 398/402 (99.00%), Query Frame = 0


Query: 79  RNARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSLGTETVRDHDDTEIQPVCNTAE 138
           RNARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSLGTETVRDHDDTEIQPVCNTAE
Sbjct: 44  RNARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSLGTETVRDHDDTEIQPVCNTAE 103

Query: 139 LDRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQPDLNTVQGVVEKSLGKFVDEKKAQQ 198
           L+RAP KDGTGRWARATFKIVLSYHGNSFDGWQKQP+LNTVQGVVEKSLGKFVDEKKAQQ
Sbjct: 104 LNRAPGKDGTGRWARATFKIVLSYHGNSFDGWQKQPELNTVQGVVEKSLGKFVDEKKAQQ 163

Query: 199 LKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSV 258
           LKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSV
Sbjct: 164 LKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSV 223

Query: 259 SQVSRMFHPNFSAKWRRYLYIFPLKDGEKMEPNFAIWEDVENSREEEHRDKIEALHGECK 318
           SQVSRMFHPNFSAKWRRYLYIFPLKDGE MEPNFAIWEDVEN REEEHRDKIEALHGECK
Sbjct: 224 SQVSRMFHPNFSAKWRRYLYIFPLKDGENMEPNFAIWEDVENIREEEHRDKIEALHGECK 283

Query: 319 DEILNNLVLSQDDEEPALANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPP 378
           DEILNNLVLSQDDEEPA ANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPP
Sbjct: 284 DEILNNLVLSQDDEEPASANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPP 343

Query: 379 TECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA 438
           TECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA
Sbjct: 344 TECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA 403

Query: 439 LLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFILND 480
           LLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFILND
Sbjct: 404 LLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFILND 445

[Close]

BLAST of Csor.00g092550 vs. NCBI nr
Match: XP_023531012.1 (uncharacterized protein LOC111793396 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 793 bits (2049), Expect = 2.04e-287
Identity = 393/402 (97.76%), Postives = 396/402 (98.51%), Query Frame = 0


Query: 79  RNARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSLGTETVRDHDDTEIQPVCNTAE 138
           RNARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSLGTETVRDHDDTEIQPVCNTAE
Sbjct: 44  RNARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSLGTETVRDHDDTEIQPVCNTAE 103

Query: 139 LDRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQPDLNTVQGVVEKSLGKFVDEKKAQQ 198
           L+RAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQP+L TVQGVVEKSLGKFVDEKKAQQ
Sbjct: 104 LNRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQPELITVQGVVEKSLGKFVDEKKAQQ 163

Query: 199 LKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSV 258
           LKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSV
Sbjct: 164 LKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSV 223

Query: 259 SQVSRMFHPNFSAKWRRYLYIFPLKDGEKMEPNFAIWEDVENSREEEHRDKIEALHGECK 318
           SQVSRMFHPNFSAKWRRYLYIFPLKDGE MEPNF IWEDVENSREE+ RDKIE LHGECK
Sbjct: 224 SQVSRMFHPNFSAKWRRYLYIFPLKDGENMEPNFPIWEDVENSREED-RDKIEVLHGECK 283

Query: 319 DEILNNLVLSQDDEEPALANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPP 378
           DEILNNLVLSQDDEEPA ANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPP
Sbjct: 284 DEILNNLVLSQDDEEPASANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPP 343

Query: 379 TECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA 438
           TECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA
Sbjct: 344 TECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA 403

Query: 439 LLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFILND 480
           LLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFILND
Sbjct: 404 LLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFILND 444

[Close]

BLAST of Csor.00g092550 vs. NCBI nr
Match: XP_023006334.1 (uncharacterized protein LOC111499102 isoform X1 [Cucurbita maxima])

HSP 1 Score: 795 bits (2052), Expect = 4.16e-287
Identity = 392/402 (97.51%), Postives = 396/402 (98.51%), Query Frame = 0


Query: 79  RNARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSLGTETVRDHDDTEIQPVCNTAE 138
           RNARWTSRESYQ MYERPWQEVLDFYSHAVNGRLSLSSL TETVRDHDDTEIQPVCNTAE
Sbjct: 90  RNARWTSRESYQLMYERPWQEVLDFYSHAVNGRLSLSSLRTETVRDHDDTEIQPVCNTAE 149

Query: 139 LDRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQPDLNTVQGVVEKSLGKFVDEKKAQQ 198
           L+RAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQP+LNTVQGVVEKSLGKFVDEKKAQQ
Sbjct: 150 LNRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQPELNTVQGVVEKSLGKFVDEKKAQQ 209

Query: 199 LKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSV 258
           LKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSV
Sbjct: 210 LKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSV 269

Query: 259 SQVSRMFHPNFSAKWRRYLYIFPLKDGEKMEPNFAIWEDVENSREEEHRDKIEALHGECK 318
           SQVSRMFHPNFSAKWRRYLYIFPLKDGE MEPNFAI EDVENSREEE+RDKIE LHGECK
Sbjct: 270 SQVSRMFHPNFSAKWRRYLYIFPLKDGENMEPNFAILEDVENSREEEYRDKIEVLHGECK 329

Query: 319 DEILNNLVLSQDDEEPALANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPP 378
           DEILNNL+LSQDDEEPA ANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPP
Sbjct: 330 DEILNNLILSQDDEEPASANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPP 389

Query: 379 TECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA 438
           TECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA
Sbjct: 390 TECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA 449

Query: 439 LLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFILND 480
           LLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFILND
Sbjct: 450 LLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFILND 491

[Close]

BLAST of Csor.00g092550 vs. ExPASy TrEMBL
Match: A0A6J1EZC2 (tRNA pseudouridine synthase OS=Cucurbita moschata OX=3662 GN=LOC111440432 PE=3 SV=1)

HSP 1 Score: 804 bits (2077), Expect = 5.58e-292
Identity = 396/402 (98.51%), Postives = 398/402 (99.00%), Query Frame = 0


Query: 79  RNARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSLGTETVRDHDDTEIQPVCNTAE 138
           RNARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSLGTETVRDHDDTEIQPVCNTAE
Sbjct: 44  RNARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSLGTETVRDHDDTEIQPVCNTAE 103

Query: 139 LDRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQPDLNTVQGVVEKSLGKFVDEKKAQQ 198
           L+RAP KDGTGRWARATFKIVLSYHGNSFDGWQKQP+LNTVQGVVEKSLGKFVDEKKAQQ
Sbjct: 104 LNRAPGKDGTGRWARATFKIVLSYHGNSFDGWQKQPELNTVQGVVEKSLGKFVDEKKAQQ 163

Query: 199 LKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSV 258
           LKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSV
Sbjct: 164 LKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSV 223

Query: 259 SQVSRMFHPNFSAKWRRYLYIFPLKDGEKMEPNFAIWEDVENSREEEHRDKIEALHGECK 318
           SQVSRMFHPNFSAKWRRYLYIFPLKDGE MEPNFAIWEDVEN REEEHRDKIEALHGECK
Sbjct: 224 SQVSRMFHPNFSAKWRRYLYIFPLKDGENMEPNFAIWEDVENIREEEHRDKIEALHGECK 283

Query: 319 DEILNNLVLSQDDEEPALANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPP 378
           DEILNNLVLSQDDEEPA ANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPP
Sbjct: 284 DEILNNLVLSQDDEEPASANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPP 343

Query: 379 TECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA 438
           TECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA
Sbjct: 344 TECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA 403

Query: 439 LLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFILND 480
           LLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFILND
Sbjct: 404 LLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFILND 445

[Close]

BLAST of Csor.00g092550 vs. ExPASy TrEMBL
Match: A0A6J1L1W3 (tRNA pseudouridine synthase OS=Cucurbita maxima OX=3661 GN=LOC111499102 PE=3 SV=1)

HSP 1 Score: 795 bits (2052), Expect = 2.01e-287
Identity = 392/402 (97.51%), Postives = 396/402 (98.51%), Query Frame = 0


Query: 79  RNARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSLGTETVRDHDDTEIQPVCNTAE 138
           RNARWTSRESYQ MYERPWQEVLDFYSHAVNGRLSLSSL TETVRDHDDTEIQPVCNTAE
Sbjct: 90  RNARWTSRESYQLMYERPWQEVLDFYSHAVNGRLSLSSLRTETVRDHDDTEIQPVCNTAE 149

Query: 139 LDRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQPDLNTVQGVVEKSLGKFVDEKKAQQ 198
           L+RAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQP+LNTVQGVVEKSLGKFVDEKKAQQ
Sbjct: 150 LNRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQPELNTVQGVVEKSLGKFVDEKKAQQ 209

Query: 199 LKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSV 258
           LKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSV
Sbjct: 210 LKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSV 269

Query: 259 SQVSRMFHPNFSAKWRRYLYIFPLKDGEKMEPNFAIWEDVENSREEEHRDKIEALHGECK 318
           SQVSRMFHPNFSAKWRRYLYIFPLKDGE MEPNFAI EDVENSREEE+RDKIE LHGECK
Sbjct: 270 SQVSRMFHPNFSAKWRRYLYIFPLKDGENMEPNFAILEDVENSREEEYRDKIEVLHGECK 329

Query: 319 DEILNNLVLSQDDEEPALANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPP 378
           DEILNNL+LSQDDEEPA ANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPP
Sbjct: 330 DEILNNLILSQDDEEPASANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPP 389

Query: 379 TECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA 438
           TECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA
Sbjct: 390 TECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA 449

Query: 439 LLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFILND 480
           LLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFILND
Sbjct: 450 LLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFILND 491

[Close]

BLAST of Csor.00g092550 vs. ExPASy TrEMBL
Match: A0A6J1F4H2 (tRNA pseudouridine synthase OS=Cucurbita moschata OX=3662 GN=LOC111440432 PE=3 SV=1)

HSP 1 Score: 769 bits (1986), Expect = 2.99e-278
Identity = 382/392 (97.45%), Postives = 384/392 (97.96%), Query Frame = 0


Query: 79  RNARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSLGTETVRDHDDTEIQPVCNTAE 138
           RNARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSLGTETVRDHDDTEIQPVCNTAE
Sbjct: 44  RNARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSLGTETVRDHDDTEIQPVCNTAE 103

Query: 139 LDRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQPDLNTVQGVVEKSLGKFVDEKKAQQ 198
           L+RAP KDGTGRWARATFKIVLSYHGNSFDGWQKQP+LNTVQGVVEKSLGKFVDEKKAQQ
Sbjct: 104 LNRAPGKDGTGRWARATFKIVLSYHGNSFDGWQKQPELNTVQGVVEKSLGKFVDEKKAQQ 163

Query: 199 LKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSV 258
           LKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSV
Sbjct: 164 LKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSV 223

Query: 259 SQVSRMFHPNFSAKWRRYLYIFPLKDGEKMEPNFAIWEDVENSREEEHRDKIEALHGECK 318
           SQVSRMFHPNFSAKWRRYLYIFPLKDGE MEPNFAIWEDVEN REEEHRDKIEALHGECK
Sbjct: 224 SQVSRMFHPNFSAKWRRYLYIFPLKDGENMEPNFAIWEDVENIREEEHRDKIEALHGECK 283

Query: 319 DEILNNLVLSQDDEEPALANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPP 378
           DEILNNLVLSQDDEEPA ANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPP
Sbjct: 284 DEILNNLVLSQDDEEPASANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPP 343

Query: 379 TECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA 438
           TECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA
Sbjct: 344 TECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA 403

Query: 439 LLKLMDATCRRATAPPAPPDGLSLVDVGYTEF 470
           LLKLMDATCRRATAPPAPPDGLSLVD    EF
Sbjct: 404 LLKLMDATCRRATAPPAPPDGLSLVDKVGWEF 435

[Close]

BLAST of Csor.00g092550 vs. ExPASy TrEMBL
Match: A0A6J1EZD3 (tRNA pseudouridine synthase OS=Cucurbita moschata OX=3662 GN=LOC111440432 PE=3 SV=1)

HSP 1 Score: 768 bits (1984), Expect = 4.64e-278
Identity = 380/386 (98.45%), Postives = 382/386 (98.96%), Query Frame = 0


Query: 79  RNARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSLGTETVRDHDDTEIQPVCNTAE 138
           RNARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSLGTETVRDHDDTEIQPVCNTAE
Sbjct: 44  RNARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSLGTETVRDHDDTEIQPVCNTAE 103

Query: 139 LDRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQPDLNTVQGVVEKSLGKFVDEKKAQQ 198
           L+RAP KDGTGRWARATFKIVLSYHGNSFDGWQKQP+LNTVQGVVEKSLGKFVDEKKAQQ
Sbjct: 104 LNRAPGKDGTGRWARATFKIVLSYHGNSFDGWQKQPELNTVQGVVEKSLGKFVDEKKAQQ 163

Query: 199 LKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSV 258
           LKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSV
Sbjct: 164 LKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSV 223

Query: 259 SQVSRMFHPNFSAKWRRYLYIFPLKDGEKMEPNFAIWEDVENSREEEHRDKIEALHGECK 318
           SQVSRMFHPNFSAKWRRYLYIFPLKDGE MEPNFAIWEDVEN REEEHRDKIEALHGECK
Sbjct: 224 SQVSRMFHPNFSAKWRRYLYIFPLKDGENMEPNFAIWEDVENIREEEHRDKIEALHGECK 283

Query: 319 DEILNNLVLSQDDEEPALANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPP 378
           DEILNNLVLSQDDEEPA ANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPP
Sbjct: 284 DEILNNLVLSQDDEEPASANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPP 343

Query: 379 TECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA 438
           TECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA
Sbjct: 344 TECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA 403

Query: 439 LLKLMDATCRRATAPPAPPDGLSLVD 464
           LLKLMDATCRRATAPPAPPDGLSLVD
Sbjct: 404 LLKLMDATCRRATAPPAPPDGLSLVD 429

[Close]

BLAST of Csor.00g092550 vs. ExPASy TrEMBL
Match: A0A6J1EZC8 (tRNA pseudouridine synthase OS=Cucurbita moschata OX=3662 GN=LOC111440432 PE=3 SV=1)

HSP 1 Score: 768 bits (1984), Expect = 5.00e-278
Identity = 380/386 (98.45%), Postives = 382/386 (98.96%), Query Frame = 0


Query: 79  RNARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSLGTETVRDHDDTEIQPVCNTAE 138
           RNARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSLGTETVRDHDDTEIQPVCNTAE
Sbjct: 44  RNARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSLGTETVRDHDDTEIQPVCNTAE 103

Query: 139 LDRAPVKDGTGRWARATFKIVLSYHGNSFDGWQKQPDLNTVQGVVEKSLGKFVDEKKAQQ 198
           L+RAP KDGTGRWARATFKIVLSYHGNSFDGWQKQP+LNTVQGVVEKSLGKFVDEKKAQQ
Sbjct: 104 LNRAPGKDGTGRWARATFKIVLSYHGNSFDGWQKQPELNTVQGVVEKSLGKFVDEKKAQQ 163

Query: 199 LKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSV 258
           LKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSV
Sbjct: 164 LKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSV 223

Query: 259 SQVSRMFHPNFSAKWRRYLYIFPLKDGEKMEPNFAIWEDVENSREEEHRDKIEALHGECK 318
           SQVSRMFHPNFSAKWRRYLYIFPLKDGE MEPNFAIWEDVEN REEEHRDKIEALHGECK
Sbjct: 224 SQVSRMFHPNFSAKWRRYLYIFPLKDGENMEPNFAIWEDVENIREEEHRDKIEALHGECK 283

Query: 319 DEILNNLVLSQDDEEPALANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPP 378
           DEILNNLVLSQDDEEPA ANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPP
Sbjct: 284 DEILNNLVLSQDDEEPASANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPP 343

Query: 379 TECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA 438
           TECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA
Sbjct: 344 TECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA 403

Query: 439 LLKLMDATCRRATAPPAPPDGLSLVD 464
           LLKLMDATCRRATAPPAPPDGLSLVD
Sbjct: 404 LLKLMDATCRRATAPPAPPDGLSLVD 429

[Close]

BLAST of Csor.00g092550 vs. TAIR 10
Match: AT5G35400.1 (Pseudouridine synthase family protein )

HSP 1 Score: 483.4 bits (1243), Expect = 2.1e-136
Identity = 252/407 (61.92%), Postives = 307/407 (75.43%), Query Frame = 0


Query: 81  ARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSL-GTETVRDHDDTEIQPVCNTAEL 140
           ARW +RE+++FMY+RPWQ VLDFYS+AV G LS+ SL   +    HDD   + +   +E 
Sbjct: 18  ARWNARETFRFMYDRPWQHVLDFYSNAVEGNLSVLSLFQPKKSLVHDDGITEEMLLESEP 77

Query: 141 DRAPVKDG-TGRWARATFKIVLSYHGNSFDGWQKQPDLNTVQGVVEKSLGKFVDEKKAQQ 200
           + +  KDG +GRW R  FKIVLSY+G SFDGWQKQPDL+TVQGVVEKSLG FVDE+KAQ 
Sbjct: 78  ETSTRKDGRSGRWERVNFKIVLSYNGASFDGWQKQPDLHTVQGVVEKSLGGFVDERKAQL 137

Query: 201 LKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSV 260
           LK +C P+EG  +VAGRTDKGV+AL QVCSFYTWR D++P  IE +IN  A GKLRV+S+
Sbjct: 138 LKKKCKPLEGRVLVAGRTDKGVSALNQVCSFYTWRKDIEPIAIEDAINKDASGKLRVVSI 197

Query: 261 SQVSRMFHPNFSAKWRRYLYIFPLKDGEKMEPNFAIWEDVENSREEEHRDKIEALHGECK 320
           S+VSR FHPNFSAKWRRYLYIFPL D E +  +    E+ EN   +E++ K    +G   
Sbjct: 198 SKVSRSFHPNFSAKWRRYLYIFPLDDAEPLRKS---GENHENFIFDENKKK--QRNGLLS 257

Query: 321 DEILNNLVLSQDDE--------EPALANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTK 380
           +EI   +++S+DDE           +  KP  FS+ +V+QLL+ L+GK+LSYKMFARDTK
Sbjct: 258 EEIAEEVIMSEDDELEIEETSNALEVVEKPSDFSVSKVDQLLQHLQGKVLSYKMFARDTK 317

Query: 381 ASRNEGPPTECFVYHARAMEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREA 440
           A+RNEGPPTECF+YHARA E RL   D   GR VMCVELVANRFLRKMVRVLVAT+IREA
Sbjct: 318 AARNEGPPTECFMYHARAAEIRLSSSDCVEGRRVMCVELVANRFLRKMVRVLVATSIREA 377

Query: 441 AAGAGEDALLKLMDATCRRATAPPAPPDGLSLVDVGYTEFDPQNCFI 478
           AAGA +DALLKL++A+CRRATAPPAP +GL L DVGYT+FDPQ   I
Sbjct: 378 AAGAEDDALLKLLEASCRRATAPPAPSEGLCLFDVGYTDFDPQTSLI 419

[Close]

BLAST of Csor.00g092550 vs. TAIR 10
Match: AT5G35400.2 (Pseudouridine synthase family protein )

HSP 1 Score: 459.9 bits (1182), Expect = 2.5e-129
Identity = 252/458 (55.02%), Postives = 307/458 (67.03%), Query Frame = 0


Query: 81  ARWTSRESYQFMYERPWQEVLDFYSHAVNGRLSLSSL-GTETVRDHDDTEIQPVCNTAEL 140
           ARW +RE+++FMY+RPWQ VLDFYS+AV G LS+ SL   +    HDD   + +   +E 
Sbjct: 18  ARWNARETFRFMYDRPWQHVLDFYSNAVEGNLSVLSLFQPKKSLVHDDGITEEMLLESEP 77

Query: 141 DRAPVKDG-TGRWARATFKIVLSYHGNSFDGWQKQPDLNTVQGVVEKSLGKFVDEKKAQQ 200
           + +  KDG +GRW R  FKIVLSY+G SFDGWQKQPDL+TVQGVVEKSLG FVDE+KAQ 
Sbjct: 78  ETSTRKDGRSGRWERVNFKIVLSYNGASFDGWQKQPDLHTVQGVVEKSLGGFVDERKAQL 137

Query: 201 LKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSV 260
           LK +C P+EG  +VAGRTDKGV+AL QVCSFYTWR D++P  IE +IN  A GKLRV+S+
Sbjct: 138 LKKKCKPLEGRVLVAGRTDKGVSALNQVCSFYTWRKDIEPIAIEDAINKDASGKLRVVSI 197

Query: 261 SQVSRMFHPNFSAKWRRYLYIFPLKDGEKMEPNFAIWEDVENSREEEHRDKIEALHGECK 320
           S+VSR FHPNFSAKWRRYLYIFPL D E +  +    E+ EN   +E++ K    +G   
Sbjct: 198 SKVSRSFHPNFSAKWRRYLYIFPLDDAEPLRKS---GENHENFIFDENKKK--QRNGLLS 257

Query: 321 DEILNNLVLSQDDE--------EPALANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTK 380
           +EI   +++S+DDE           +  KP  FS+ +V+QLL+ L+GK+LSYKMFARDTK
Sbjct: 258 EEIAEEVIMSEDDELEIEETSNALEVVEKPSDFSVSKVDQLLQHLQGKVLSYKMFARDTK 317

Query: 381 ASRNEGPPTECFVYHARAMEARLP------------------------------------ 440
           A+RNEGPPTECF+YHARA E RL                                     
Sbjct: 318 AARNEGPPTECFMYHARAAEIRLSSSVVHFVAWVFGGSIVLVILATEGSTLDLTDTKLYI 377

Query: 441 ---------------CLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDAL 478
                            D   GR VMCVELVANRFLRKMVRVLVAT+IREAAAGA +DAL
Sbjct: 378 ASWFLIKRSCEFLFIASDCVEGRRVMCVELVANRFLRKMVRVLVATSIREAAAGAEDDAL 437

[Close]

BLAST of Csor.00g092550 vs. TAIR 10
Match: AT3G06950.1 (Pseudouridine synthase family protein )

HSP 1 Score: 63.9 bits (154), Expect = 4.0e-10
Identity = 40/124 (32.26%), Postives = 58/124 (46.77%), Query Frame = 0


Query: 156 FKIVLSYHGNSFDGWQKQPDLNTVQGVVEKSLGKFVD-EKKAQQLKDRCLPIEGCAVVAG 215
           +++V++Y G  F GWQ Q    T+Q ++EK+L +  +  +K  QL           + AG
Sbjct: 43  WRLVIAYDGTRFAGWQYQESPPTIQSMLEKALIQITELGRKELQL-----------IGAG 102

Query: 216 RTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWR 275
           RTD GV A  QV  F T            ++N   P  +RV  +S     FH  FSA  +
Sbjct: 103 RTDAGVHAWGQVAHFVTPFNYTSLDSFHAALNGLLPKDIRVRELSAAVPEFHARFSASSK 155

Query: 276 RYLY 279
            Y Y
Sbjct: 163 VYRY 155

[Close]

BLAST of Csor.00g092550 vs. TAIR 10
Match: AT1G20370.1 (Pseudouridine synthase family protein )

HSP 1 Score: 62.0 bits (149), Expect = 1.5e-09
Identity = 49/172 (28.49%), Postives = 77/172 (44.77%), Query Frame = 0


Query: 111 RLSLSSLGTETVRDHDDTEIQPVCNTAELDRAPVKDGTGRWARATFKIVLSYHGNSFDGW 170
           +L +S+ G ET    D + +    +     RAP      ++ R    IV ++ G  + G 
Sbjct: 25  KLKISTTGQET----DSSAVTTGGSNVAERRAP------KYRRRKVAIVFAFCGVGYQGM 84

Query: 171 QKQPDLNTVQGVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFY 230
           QK P   T++G +E++L        A    DR  P       + RTDKGV+A+ QV S  
Sbjct: 85  QKNPGAKTIEGELEEAL----FHAGAVPDADRNKPRNYEWARSARTDKGVSAVGQVVS-- 144

Query: 231 TWRTDVKPQDIEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWRRYLYIFPL 283
             R  V P      +N+  P ++RV    +V+  F        RRY+Y+ P+
Sbjct: 145 -GRFYVDPPGFVERLNSKLPDQIRVFGYKRVAPSFSSKKFCDRRRYVYLIPV 179

[Close]

BLAST of Csor.00g092550 vs. TAIR 10
Match: AT1G76120.1 (Pseudouridine synthase family protein )

HSP 1 Score: 55.1 bits (131), Expect = 1.8e-07
Identity = 35/125 (28.00%), Postives = 59/125 (47.20%), Query Frame = 0


Query: 158 IVLSYHGNSFDGWQKQPDLNTVQGVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAGRTD 217
           I+ ++ G  + G QK P   T++G +E++L       ++ + K +       A    RTD
Sbjct: 26  IIFAFCGVGYQGMQKNPGAKTIEGELEEALFHAGAVPESIRGKPKLYDFARSA----RTD 85

Query: 218 KGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWRRYL 277
           KGV+A+ QV S    R  V P      +N+  P ++R+     V+  F        RRY+
Sbjct: 86  KGVSAVGQVVS---GRFIVDPLGFVNRLNSNLPNQIRIFGYKHVTPSFSSKKFCDRRRYV 143

Query: 278 YIFPL 283
           Y+ P+
Sbjct: 146 YLLPV 143

The following BLAST results are available for this feature:

BLAST of Csor.00g092550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B3WAI6	3.7e-13	35.77	tRNA pseudouridine synthase A OS=Lactobacillus casei (strain BL23) OX=543734 GN=...	[more]
Q035B5	3.7e-13	35.77	tRNA pseudouridine synthase A OS=Lactobacillus paracasei (strain ATCC 334 / BCRC...	[more]
Q73KE3	3.7e-13	25.16	tRNA pseudouridine synthase A OS=Treponema denticola (strain ATCC 35405 / DSM 14...	[more]
B0SC03	4.9e-13	35.77	tRNA pseudouridine synthase A OS=Leptospira biflexa serovar Patoc (strain Patoc ...	[more]
B0SJC4	4.9e-13	35.77	tRNA pseudouridine synthase A OS=Leptospira biflexa serovar Patoc (strain Patoc ...	[more]

BLAST of Csor.00g092550 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6587701.1	0.0	100.00	hypothetical protein SDJN03_16266, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7021669.1	5.27e-296	100.00	truA, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022933289.1	1.15e-291	98.51	uncharacterized protein LOC111440432 isoform X1 [Cucurbita moschata]	[more]
XP_023531012.1	2.04e-287	97.76	uncharacterized protein LOC111793396 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023006334.1	4.16e-287	97.51	uncharacterized protein LOC111499102 isoform X1 [Cucurbita maxima]	[more]

BLAST of Csor.00g092550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EZC2	5.58e-292	98.51	tRNA pseudouridine synthase OS=Cucurbita moschata OX=3662 GN=LOC111440432 PE=3 S...	[more]
A0A6J1L1W3	2.01e-287	97.51	tRNA pseudouridine synthase OS=Cucurbita maxima OX=3661 GN=LOC111499102 PE=3 SV=...	[more]
A0A6J1F4H2	2.99e-278	97.45	tRNA pseudouridine synthase OS=Cucurbita moschata OX=3662 GN=LOC111440432 PE=3 S...	[more]
A0A6J1EZD3	4.64e-278	98.45	tRNA pseudouridine synthase OS=Cucurbita moschata OX=3662 GN=LOC111440432 PE=3 S...	[more]
A0A6J1EZC8	5.00e-278	98.45	tRNA pseudouridine synthase OS=Cucurbita moschata OX=3662 GN=LOC111440432 PE=3 S...	[more]

BLAST of Csor.00g092550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35400.1	2.1e-136	61.92	Pseudouridine synthase family protein	[more]
AT5G35400.2	2.5e-129	55.02	Pseudouridine synthase family protein	[more]
AT3G06950.1	4.0e-10	32.26	Pseudouridine synthase family protein	[more]
AT1G20370.1	1.5e-09	28.49	Pseudouridine synthase family protein	[more]
AT1G76120.1	1.8e-07	28.00	Pseudouridine synthase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020095	Pseudouridine synthase I, TruA, C-terminal	GENE3D	3.30.70.660		coord: 323..465 e-value: 4.0E-14 score: 54.6
IPR020097	Pseudouridine synthase I, TruA, alpha/beta domain	PFAM	PF01416	PseudoU_synth_1	coord: 379..467 e-value: 1.4E-6 score: 28.8
IPR020094	Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal	GENE3D	3.30.70.580		coord: 153..271 e-value: 5.6E-25 score: 89.7
None	No IPR available	PANTHER	PTHR11142:SF10	TRNA PSEUDOURIDINE SYNTHASE	coord: 81..477
IPR001406	Pseudouridine synthase I, TruA	PANTHER	PTHR11142	PSEUDOURIDYLATE SYNTHASE	coord: 81..477
IPR020103	Pseudouridine synthase, catalytic domain superfamily	SUPERFAMILY	55120	Pseudouridine synthase	coord: 155..472

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g092550.m01	Csor.00g092550.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031119	tRNA pseudouridine synthesis
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0009451	RNA modification
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0106029	tRNA pseudouridine synthase activity
molecular_function	GO:0009982	pseudouridine synthase activity