Csor.00g089430 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g089430
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr11: 3248346 .. 3249782 (+)
RNA-Seq ExpressionCsor.00g089430
SyntenyCsor.00g089430
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAGCATAAGAACATTATCCCACATGCCACCGAAAATTGCAGCATAAACCGAGCGGAATTGTTCGATATTCTTCTGAAGAAATGCCAGGTAAAACCACGACATGCTTAATAATATGCACTATATTCTCATTCTTTATCTTATGGATGGCGTTGATAAGTGGTCTTAGTGAGGAGATGAACTCGTGTTTATGGATGATTCCTTTTGCCCATAAGGTGTTTGATAAAATGTCTGAATCATTTTTTCAACGTAGTGGTTGCTCTGCCGATGCTACTCTTGCTTTTATTCATATTCTTTTTCTTTGTTTACTTGTGCATCGTCGACTCATTTGAATATTCCAGCATGTTTGAACATATCTATATGGAAAGAAGCTGACTGCAGTTTTGTTTCTTCAGAAGGAAGAAAAATGCGCCTTCCTTTGACAAGATGGTCAAGTTTCCAGGGCTACCCAAAAGGTAGAATTTTTTCCCCTCTTTCAACATGCAAGATTGTTCGAGGATTGTTGGGAGGGAGTCCCACGTTGGCTAATTTAGGAAATGATCACGGGTTTATAAGTAAGTAATACATCTTCATTAGTATGAGACCTTTTTGGGAAGCCCGAAGCAAAGCCACGAGAGCTTGTGCTCAAAGTGGAGAATATCATACCATTGTGGAGATCTGTGATTCTTAATAAAGCTCGCTTGAAATTATAGAGCTCTGTAACTCGTTGACTTTTTGTGGTGGGGTTGGGTTTCAACTTCCATTTAATCACTCCTCTCTTAAAGAATCGAAATGAATTAATTTTTCTTCTTTAATGTGACTTTCCCATTATCCAGATATCTTGAACAAGGATGGTCTACCAGAAACTTCAAGTACTAGAAAACTTATTCTCATCAATGGTAACATTGGACCCAAAAGAACAGCACTTGATGTTTTGTCTCCTGACATTTATACACCAATCGTGGACGTGGAACTTCTAGATCACTGGAATGATGAATACGAAGGGGTCATCATTAATTCAGAGAGCCTACCCTCTTCTGCAAACGCCTTTGCATCAGCTCTCCAGGCATCTCTCTTCCAATGAAGGCTCAAGGTCTGGGAAAAAGTAAAGTTTCCCTTTCTTCTTTATACCACAGTTTTCTTGAGATCTCTGTGCCTAGAACCTTTTTTTTCCTTCCAAATTACAAACAGAGCAAGCTGAACTTGTTTCTGTGGCCATTGATGTGAGATAATAACTGATATTTTTAGTTCACACTTTCAATCACTGCAAAAGCTGTGGCATCAGATTCTCGAATTTGAACTTCCATAGCCATTATTAGATATTTTAGAGTTGTAACTTTCAGGAGGGGTTCAACTCGCATCATGCTGAAGCAGGATATGTCATGCTCACTTACTGAATTCCTACTTTGTCCTGCATGCTTCCTTCTGGCCCCTCGCATCATATTGGCGTTGTAG

mRNA sequence

ATGGAAGAGCATAAGAACATTATCCCACATGCCACCGAAAATTGCAGCATAAACCGAGCGGAATTGTTCGATATTCTTCTGAAGAAATGCCAGAGAGCCTACCCTCTTCTGCAAACGCCTTTGCATCAGCTCTCCAGGCATCTCTCTTCCAATGAAGGCTCAAGGAGGGGTTCAACTCGCATCATGCTGAAGCAGGATATGTCATGCTCACTTACTGAATTCCTACTTTGTCCTGCATGCTTCCTTCTGGCCCCTCGCATCATATTGGCGTTGTAG

Coding sequence (CDS)

ATGGAAGAGCATAAGAACATTATCCCACATGCCACCGAAAATTGCAGCATAAACCGAGCGGAATTGTTCGATATTCTTCTGAAGAAATGCCAGAGAGCCTACCCTCTTCTGCAAACGCCTTTGCATCAGCTCTCCAGGCATCTCTCTTCCAATGAAGGCTCAAGGAGGGGTTCAACTCGCATCATGCTGAAGCAGGATATGTCATGCTCACTTACTGAATTCCTACTTTGTCCTGCATGCTTCCTTCTGGCCCCTCGCATCATATTGGCGTTGTAG

Protein sequence

MEEHKNIIPHATENCSINRAELFDILLKKCQRAYPLLQTPLHQLSRHLSSNEGSRRGSTRIMLKQDMSCSLTEFLLCPACFLLAPRIILAL
Homology
[Close]
BLAST of Csor.00g089430 vs. NCBI nr
Match: KAG6588012.1 (hypothetical protein SDJN03_16577, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 184 bits (466), Expect = 1.91e-58
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0 

Query: 1  MEEHKNIIPHATENCSINRAELFDILLKKCQRAYPLLQTPLHQLSRHLSSNEGSRRGSTR 60
          MEEHKNIIPHATENCSINRAELFDILLKKCQRAYPLLQTPLHQLSRHLSSNEGSRRGSTR
Sbjct: 1  MEEHKNIIPHATENCSINRAELFDILLKKCQRAYPLLQTPLHQLSRHLSSNEGSRRGSTR 60

Query: 61 IMLKQDMSCSLTEFLLCPACFLLAPRIILAL 91
          IMLKQDMSCSLTEFLLCPACFLLAPRIILAL
Sbjct: 61 IMLKQDMSCSLTEFLLCPACFLLAPRIILAL 91

[Close]
BLAST of Csor.00g089430 vs. NCBI nr
Match: KAG7021906.1 (hypothetical protein SDJN02_15634, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 102 bits (253), Expect = 3.18e-25
Identity = 60/93 (64.52%), Postives = 60/93 (64.52%), Query Frame = 0 

Query: 32  RAYPLLQTPLHQLSRHLSSNEGSR---------------------------------RGS 91
           RAYPLLQTPLHQLSRHLSSNEGSR                                 RGS
Sbjct: 60  RAYPLLQTPLHQLSRHLSSNEGSRSGKNFLEISVPRTFFFLPNYKQSKLNLFLWPLMRGS 119

The following BLAST results are available for this feature:
BLAST of Csor.00g089430 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g089430 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6588012.11.91e-58100.00hypothetical protein SDJN03_16577, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7021906.13.18e-2564.52hypothetical protein SDJN02_15634, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Csor.00g089430 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g089430 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g089430.m01Csor.00g089430.m01mRNA