Csor.00g087630 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g087630
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description60S ribosomal protein L18
LocationCsor_Chr10: 10905438 .. 10916736 (+)
RNA-Seq ExpressionCsor.00g087630
SyntenyCsor.00g087630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAGCCTCTAAATCTCGCTACTTAATCGTTGCCTTCTCTGTTTGAATTTCCACCTTTAATGGCTGATTTGTATTTCTTGTTTGGATTTTACTTGTTGCTGTGATTAGGGGATCGATCTCGTCGCAGGAGGTAAGAGCAAGAAGACCAAGAGGACTGCGCCCAAATCTGATGATATCTATCTCAAGTTACTCGTCAAGGTACTTGTTAATCGATATTTCTCGTGCATATGCACTTTTATTTGATCTATTGATTCTTAAATATGCCTGATTGTTTGAGTCGCTTAATTGTGTTTTGTTGGATTGTCTTTGAGATGCTTCCATTGAAAATTAACTGAAATGTCAGTCGGTTGGATTTTTGGTTTCTGTAAACGGAGTTTTCCCTCATTATTTGATTCATCTTCTAAGTTTAATTTCGCTCTGTCTGCGTTGCGGTTGTCAAATCCGTTTTAAATTGCTAGCAGTTTATAAGCCTAATTTTTGTATTTTTTTTCGAACGAATTGGTTTCGATGACTGGTCTTTCTGCTTTGATGATATTTGTGAATCCCAGCTCATGATGAGATCTTTTGTAGGTCGGGGAATAGTCTTTTACCCACAATATCTGAGCCTTGCGTCTAGTTTTAGTGTCATTTTTTCTATCCATAACATGTTTCCACAATTGAAGTAAATTATTGCTTTTTCCTTTTTAGGATAAGAAAATACTCAAATGTAAGTGGATAATACGTAAATTACTATGTTACCTATATTACTTGCCCTTTTTGGGTACTGAATATATCAATATACCTCGATTTGCATGAGCTATACTTCTCGGATTTTGTTTGATTTTGTTGGAAAAGCATAAAATGTTCCCAGTGATGATTAACTTGACCATGCTAATGCTGATCACTTTGTGATTAATCCTTACTTTAATTGTTCTGAGGGAACTGGCTCCAATATTTCTATATTTTGAGCTCGATTGCATATCTTGCTCTTAAGTGAGATGGATGGGCATCGTTTTTTTATGGTGATTCTGTCATGGGAGAGGGGAGGGTACTTAATTTACCTTCATGTATTTTATGCATGAAGTGTAATACGTTTTTCTACTTGTGTGTTTTCTTGCAAATACACACATCACCTGGCCCGCATTCACTAAACAAATTATTTCTCCTATTTCTTATCAGCTTTACCGCTTCCTTGTTCGTCGTACTGGAAGCAAGTTCAATGCTGTGATTCTCAAGCGCCTGTTTATGAGCAGGGTTAACAAGCCTCCACTTTCTCTCTCTAGGCTTATCCAGTTCACGAAAGGAAAGGTTGGTTAATTATGTAGTTTTCTAATTTTATTTGGGTTGTTTTTTAGGATTGTGCATATTTGATATATCTGAAACTCTGCACATTTCCTTGTGATGTAATAGGAAAGTAAGATTGCTGTCGTTGTTGGGACTATTACCGATGATATTCGTGTCTATGAAGTTCCACCATTGAAAGTTGCTGCTCTGAGGTTTACTGAGACAGCAAGGGCAAGGATTGAGAAGGCTGGTGGGGAGTGCTTGACATTTGACCAGCTTGCTTTGAGGGCTCCACTGGGTCAGAACACGGTATGGCACTTTTCATTGATACTTCTGTTAACACTGTTTTTGAATGTGCCGAATGGGCTTTTTTTGGGTTCAAGTAATGTAGTCCATTTGCATTTTAAACTTGGTGCTACACTTTGGGATTAATATATTGTTTTGTTTTCAGTTAGCAATGTTTATCCATATATCATCTCTTGTAGACTGTAGATAAAAGCTAACGAGTTTCCAGCAATAATGGTTTAGTAGTTCTGTAGGGGTTTGAATCATCTGTTGGCTACATTTTTATTCTTTTGGTCCCATCTGCAGGTTCTTCTTAGAGGTTCTAAGAACTCCCGGGAGGCTGTGAAGCATTTTGGTCCCGCGCCTGGTGTACCGCACAGCCATAGCAAACCGTATGTGAGGTCGAAGGGTAGGAAGTTTGAGAGGGCAAGAGGAAAGAGAAACAGCAGGGGATACAGGGTTTGATTTGATCTTACGTTGTTTTCAAGCTAATTCAATGCTAGTGTGTGTTATTTTGAACTCAAAATGCAAATTTTGGTAGATTTTAGTTACCTATCAGTTGTTCCATCTCTGCTTACGATTCTGCCGTAATATTGTTGATTACGAATCGATCGAATGCTACTCAGCGAGACTTTTATAGTCCTTTTGTTTGATTTTGTGATGGCCATTTTGTGTCTGGTTCGTGTTAGAGATATCTATCTAGAATCCATTTGATTTGATGATGGTCATAAAAACTTGGATCATATTGCAATCCATTTGATTGATTAGCGATTATTGCAAGTTTTCAACTCAACTCCTTGGATGTTGTTTGATATGAATTTTGAAGGTGGAGAGGGGAAGGAGACTTGTGGACCCTCTACATACAAGATCTCTAATATGAACAAGACACTAATGAACTTCTTGAAGGAAGTTCATTCAAATTATCAACTCAAGAATTTGTAATCAATTTGACATTAGTCAAGTCTCCAAATAAATGCAACTACAATGTGACTTTGTTCTTATATGAATATGGATAAAAATTATTAGTGTTTCATTATTATATTTTAATTTCTTTTTTTTTTTTTAGATTGCATGTTTAAAATTATTTAAAATATTACATAATTGTGTGTAGTTTTAGATTTTACGTTTAGAATAATTATTCAAGTTAACATGATCGATTTTGGTCCTAGAGTAATTGTTAAGATTGTATATTTCGAATGATTCAAGCTTCACATTCTTCAGATTGTATATTACATAATTGTGTGTAGTTTTCGAATGATTCAAGCTTCACAAGTTAACATGATCAAAATAATTGTTAGATGGTATGTTTGTTTAGAATCATTCAAGCTTCACATGATTGATCTTACACATAGAACACATAGAGTGAATCTTACACATAGAGTGATTCAAATCTTAGACAATTGTATGTTTCTTTAGGAACATTCAAGCTTCACATGATTGATCTTACACATAGAGTGATTCAAATCTTAGACAACGATTCTTATATCCTCTTAGTCCCCTCCATTTCTTTGTTCGCTCTTGTTCTTGTTTAGTGATAGAAATGTAGTAGACACAAGTTAAAATAAGAAAATACTAGATCTAATAAAATTATTTTGTTATATCCATTCTATGTATAGTTTAGATGGATGGTCACTTTGCACATGTTCCTTACCTTTTTTTAGCACTAAATTTCTTTACTAGATTACTTGTTTAGAATCATAAGTTAGAAATGATCGATTTTACTTGTGCAGTGTATTGGTGAACGGAGTGATTCGAATATCAAAAAAAGTATATTTTCAATCAGCAAAGTAATAATATCAAAATCATATCTAAGACTAAATGCCAACAAGGATGTTGAATGAGGTATTTTAGACATGTAAAACCAAACATTCAAAAACATCTCCCTAGCATAGACATTAAAACTTTAACTCGTGGAAACACCACGCGATTTAACTTGTGAATGCCTCAAACTTAACTTGTGAGCACAAAAAACTTGTATATGCAAAATTTAACTTGTGAGAGCCCCAAACCAAAACTTAAAAAATATATATATATATATATATATATATATATATTTAAAAATAACGCACAAATTTGGAAATAATATATATTTAAAAAGAACATAAAAATATATTTTAAAAATATTGAACTTTTTATTTAAAAAACTAATTAGTCATTTTGTATTTAAAAAAAATTCCAATATTGTGATTGAAACTAAGGGGTAAAACTATGCATTTACAGAAAACATTAATTAATAATTGACTCAATGAATCAATTTTCATTATTATATTTCAAATATTTGAAAAAAATATAACAAAATAAACAAACCAAATTAAAAATTAAAACTATTTTTTATAGGAAGTGAATGATAAATTGTAACCCAAACATAGATTAATTATATATTTGCAAGGGAATTCATCAACGAATAATAAAACAAATAATAATTTACATAACCATCTTCCACTTCAAATAATAATTAATATTGAAAAAATAAAAATCATATATTAAAAAATTTCATTAAAATGATAAGGACCTCCAAAAGCTCAGATCGACCATTGCCATACGAAGGCCATCCTCTCAACCTTCTCCACTCATCTTCGACTCTTAATTTCAAGCAAAAATGGTAGAAGCTCATTTCAATTGCCATGGCTGTTTTAGTTCTTTCCATCTCGTCTGTCAGCAAGAATATTTATCGATAAGAATATTCACAGACTATTCACTCAAACCTCAAAAAGTTTACTTTATTATCCAATTTAAGCATAATCTCTCCTGATTTACTTTGGGCTTCCCCAGAAAGTTTCGAAGATAGTATTTCTCACTTACAAATCAATGATCTTCCACTAAATTAATCAAAGTAGGACTCAATCCCTTGAAAAGGGTGATTTCCACCGACACCTGCAGCGATTTCCCTGTCAATGACCTATGCAAATCAATCTTTAAAATCACGTTACAAAAGCAATGGATCCATCTCTATGGTAGCACAAATTATGTTCAACATTGCAGCAGATAATGTTATAAATGAAAACATAAACCAATTACAAATGCCTAAAGTTCTTGATCAGATGTGGAGCATCATCCTGGCCAAGACAACGCTCTGATATATTTAATTTCTGTAGGGGAATGTAAAGCTAAGCAGCTAAGCTCAGATCCGTGAAAAACATTATCACTTCTTATAGTAGAATTCAAATTCATATCTGGATCTTAGGTTCATAAGGATGCAAGAAAACTTGATATGTTGAACACTGTGTCAAAAGCAAGAACATATCTACAGAATGAATCTAATCAAAATGCCATTGATTGAACGATCTCTATAAACTCACATCCTTAGTGAGATTCCCTACAACAATCAGCTCATGTAAGCAAATCCGTCAATGAACTAAAGTAACAATTTATCATCAGCCGTAAAATGGAGGAAAACAATAATGTTACTAACAGATCGTCTGGTGAAAACCTACTCAAACCTAGGAATAATCGATTTCCAGTGATTTGAACTCTAAAAAACCTAATGTGTAAGGAAACTAAGGGAGAAAACATCGAAAACCAGATTAAAGCCAAGAAATCACCGGAGATCGATGGAATATCGCGAGGTCAAGCATACTTATATTAGGCATTCACGCGCAATCCTAAACAAATCAACAAAATAATCGAATACAGAATTCAAAAGATAATTCGGGGATGAATGAAATTGATATAATCCAGTTACATTGGAGCAAATCTCTATGGAAAAGAGAGAGATGGCTCAAGCAGAAAGGATGATTCGCTGTACGCACAAATAAAATCCTGGAAACAACTTCAAAAAGAAACAAATTTCCAAGAAGAACTATGTGCGAGATTTGAGATATTGAACCCCAGAATTTGAAGAAAAAACGCTGAAATCTACCGAACTTCGACTGCGCATAAACAAAAACAAGCATTCAGAAAATGATATGTGAAGAACCTTTGGTGTAAAACCCTAGCCTGTAAGATCCTTCTTATATAGAAGGGGCCAGGGGAAAGATGTTGTGAAATGACGATAATAACCCCATATCGAGTTTTAAGAAATAAAATATTTAAAGGCATTTTTTGTGAACTAAATTGTTATATATTTAAGTTTAAAATTAAGATATTAGTTGCTATATATCTTATAATTTTTAATTAATGAGTTCTATAACTTTTAAAATTATAAATAAAAGTTTGATTTCCTTCTCGAACCGATGTGAGATCTCGTAATCTACCCCTTCGTGATCAGTGTCATACTCGTTTCTCTCTCCAATCAACGTGGGATCTCACAATCCATTTCTTCGGATCTCAGCGTTTTAGCTGATACATTGCTCGGTGTTTACTAGGGATGTACATTCAACCTAACAACCCAGACCAACCCAACCCGAACTCTAAGGGTTGGGTTGGGATAGATTAGCATTTCGAGTAGGGTTGTGGTTCATTTTTTTGAACCCGAATAGAAATGGTTCGGTTGCGGGTTCGTGGGACAAAACCTTTGTGGAATAACACTCATGTCCGAGTTCGACGCTAGGCAAACACATGTTTTATTGTGTAGGTTTATGATATGTTTATTAATTATGATTTATACCTAATTTATTATATATATTTTTAATTAATTTTATGATACAAATTTTCAAGAAATGTCAGTATTTAATTGTTTTTAGTTTTATGACAACGTTGAACTATGTTATTATGTAACAATTTTTGTTTATTGTTTTTTATTGAATTTATTTATTTATTTTTTTTTTTTTTATCTATTTGTATATATTTTTAATTAATTTATGATATAAATTCCTATCCGTATTTAATTGTTTTTAAATTTATTTATTTTTTTTATATATATTTGTATATATTTTTAATTAATTTTATGAAACAAATTCTCAAGAAATGTAGGTATTTAATTGTTTTTAGTTTTATGACAATATTGAATTACATAAATACGTAACAAATTTTTTTTTAATCTATTTATATATATTTTTAATTAATTTCATCATACAAATTCTCAAGAAATGTCAATTTTATTATATATATTTTTAATTAATTTATGATACAAATTCTTTAAGAAAGGTCCGTATTTAGTTGTTTTTAAATTTATTTATTATTTTATATATATATTTGTATATATTTTTAATTAATTTTATGATACAAATTCTCAAAAAAAAAATCGGTATTTAGTTGTTTTTAGTTTTATGACAATATTGAATTATGTTAATATGTAATAAAAAAAATTTTAATCTATTTGTATATATTTTTAATTAATTTCATGATACAAATTCTTAAGAAATGTCGGTATTTAGTTGTTTTTAGTTTTATTACAATGATGAACTATGTTAATATGTAACCATTTTCGTTTGTTTATATATATATCTATATATATATATATATATATTTTTTTTCTTTTGATAATTATAGATTGATGTTTGTTTGTTTGGAAACTTTTAACCTATTTTATTTGTATCCGAATAATTATAAATTGTGGATAAATAAAATTTGACAACCCAACTCGAAAATATGGAGGGTTGGGTTGGGTTACCAATCCAACCAAACCGAACTATTAGGTTGGGTCAAAAAGATCTCTCAACCAAACCCAACCCAGCTCGGACCATGCACACACCTACTATCCACCCCATTTGGGGCTAGCGTCCTCTTTGTCACACCGTCTAGTGTCCACTCCCTTTAAGGCCTAACGTCCTCCTTGGCATGCAGCTAAATAAATTTTCACACCATTACAAAAATGTTTCGTTCCCCTCTTCAATGTGGGATCTTATAGTTGTTTTCATTGCATATCCTAACCAAAATTAAGGCTATTTTTTTTAAGTGATTATGTCTAATAATGTCTTGTTTTCTCCGTTTACATCTTAACTTCACACAAAATATTAATATTTAAAGATGTTCATTTAACCTACGAACCTCAACGGATTGGAGACGGTGAATATGGCTTGCACGAGGTTGCTAATTTTCTGACATGTGGTACAGTTGGAGGTTTGAGATTGGCAATTGACGGCAACGTCCAATTGTGAGGGGTTGGAGAAGGTGAGATCGGATTGTTGAGGTTTGTCCCCGACTAATTGAGGGAATGATCATGAGTTTATAAGCAAGGAATACTATCTCCATTAGGGTGAGGCCTTTTGGGAAGCCCAAAGCAAAGCCATTTTGAATATGGACAATATCATACCATTATCTAGAGAGTCGTGATTCCTAACATAGTATAGAACCATGCCCTAAACTTAGCGATGACAATAAAATCCTTAAATGTCGAACAAAGTATTGTGAGCCTAGAAGATATAGTTAAAAGTGACTAAAGTGTCGAACAAATGGTGTACTTTGTTCGAAAACTCCAAAAGAGGAGTCGAGCATCGATTAAGGGAAGGCTGTTCGAAGGCTCCATAGGCCTTGGGGAGGCTCTATAGCGTACTTTGTTTCATCAAAAGTTCAATTTCACCTCTATATCGAGGATTGTCCCATATTAGCTAATTTAGGGAATGTTCATGAATGATCATGACTCATACGTCTGGTCTGGTCTATGCAATTCCTAAAAATAAGAAAAAAAAATCACAAATGTATATAAAAATATATTCCAAACTTAATATCTCAAATCAAATTTGATAATATGAGGTTCGTGTTTGCAGGTTTCTAGTCTCGACGTTGAGATTTGGTGTACGAAGTGCTCCGATTTGAAGGTTCTTGATCTCTCTTATCTCAAGCTTTTCTTGATCTGTTTTACTTATGGTTTTTGTTGCGAATGTAGCGAAATTTCTAATTTCAAGTTTCAATTCGTGAAACGAAATGTTCTAAGCGCTGCAAAATGGTTGATGTTTTCCTTGCAAAATCCATAGGCAACTGGTTTTAAGAACTTCTCAAGAACTAGGATTATTAAGTGGATTAGAAAATTTAAGATCGCTATGTTCTTCCACTTGAAGAACAAGTGCAATTGTTCTTGAAAATCAGGGTACATATTCTCATAGAAATTTTGTTTTAAATTTTTTTAAAATCATCGTCCAGGCAGTACCGATCATTTTCTTTGTGAATGTTGCGAAATTTCTAATTTCAACTTTCAATACGTGAAGCGCTGCAAAATTGTTGATGTTTTCCTTGCAAAATTCATAAGCATCTGGTTTTAAGACGCTTCTCAAGAACTAGGATTATTAAGTGGATTAGAAAATTTAAGATCGTTATGTTCTTCCACTTGAAGAACAAGTGCAGTTATTCTTGAAAATTAGGGCACATATTCTCATAGAAATTTTGTTTTAGAATTTTTTTAAATCATCGGCCAAGCAGTTCCGATCATTTTCTTTTGGCAATACAGTATTATAGTTAAAATTTGTGAACTGAACTTGATATTAGGTTAATACATTTGACAAATGAATCGCTACGTTCTGTATCTTCTTTGCCAAAGCTTGAGATTTTGGTTATGGTGGTCTGTCTTTCAGTTGACGATGTTGGTTTGCAGTATCTTGATTATGGCTTCTGTGAGATCTCACATCGGTTAGAGAGGGAAACGAAACATTTCTTATAAGGGTGTGGAAACCTCTCCCTAACGGATGCGTAAAGAGGACAATATTTGCTAGTGGTAGACTTGGGTAGTAGACAATATCTGCTAGCGGTAGGCTTGGGTAGAAGACAATATCTGCTAGCGGTAGGCTTGGGTCGAAGACAATATCTGCTAGTAGTAGGTTTGGGTAGAAGACAATATCTGCTAGCGGTAGGCTTTGGTTGCTACAAATAGTACTAACCTTGAGGGGAAGCTACAAATAGGATGGATGGTGAGATTCTACCAATAGTATTAAAACCTTGAGGAGAAGCTACAAATAGGATGGATGGTGAGATTCCACATCGGTAGGAGAGGGGAACGAAGCACTCATAAGGGTGTGAAAACTTCTCCCTAACGGACGCATTTTAAAACTTTAAGGGGAAGTCTGGAAGGGAAAGCCCAAAGAGGACATATCTGCTATCGGTGGGCTTGGGCTGCTACAAATAGTATCAGAGCCAGACATCGGGTAGTGTGCCAGCAAGGATGTTGGGCTCCCAAGGGGGATGGATTGTGAGATCCCACATCAGTTGGAGAGGGGAACGAAACATTCCTTATAAGGGTGTGAAAATCTCTCCCTATCATTTTAAAACCTTGAGTGAAAACCTGAAAGGGAAAGCTCAAAGAGGACTATATCTACTAGCAGTGGACTTAGGCTGCTACAAACGATATCAGAGCCAGACACGGGGCAGTGTTCTTTCTGGTTGTAAAAGATCAGTAGATTTGGATTTGAAACAGGTACATGGTTTCATTATGAAGTAATTGTTACAATAATAGGCTATTTGCTTATCTTATTCCCTACCTTTCAGAAAGTAGCTTCTAAAGTAATGGGATTGTTTATTCACTATGCTAAAGAGTGTCTTTAACTATTTTAAATCACTTTTCAAATCTTCATAATATTTGGCTAAATATCAGCCATTATTTTTGTAGTTTAGAATCCTTTAAAGTGCTTTTAATGAACCTGCTTGCCTCCAGATCAAGAAACTCTAGTTGCATGCATCTCTCCCGTTTGTGCTCTCCTCAGATATGCTTGAAATTCTGAATGCTTGGGGTTGCAGGATTAGATTTCTTGTGCATACGTGTTTGTCATGTTCGATATGTATGTTAGGAATCACGAACCTCTACAGTGATATGATGTTGTCCACCTTGAGCGTAAGCTCTCGTGGTTTTGTTTTTGGTTTTCCTAAAGGCCTCACACTAATGGAGATAGTATTCTTTACTTATAAACCCACGATCAACCCCTTAATTAGCCGATGTGGGACTCTTCTCCTCGAACAAAGTACAACCTTTGTTCGACACTTAGTCCCCTTTGTTCAACATTTGAGGATTCTATTGACATACTAAGTTAGGGGCATGGCTCTGATATCATATTAGGAATCACGGACCTTCACAATGATATGATATTGTCCACTTTGAGCATAAGCTCTCACGGCTTTGCTTTTGGTTTTTCCAAAAGGGCTCGTACCAATGGAGATAGTATTCCTTACTTATAAACTCATGATCAACCCCTTAATTAGCCGATGTGGGGCTCTTCTTTGAACAATCCTCCCCTCGAACAAAGTACATCATAGAGCCTCACCTGAGGCGTATGGAGCCCTCGAACAAAGTACACCCTCTGTTCGACACTTAGTCACTTTTGATTACATCTTCGAGGCATATAACTTCTTTGTTTGACATTTGAGGATTCTATTGACATGACTAAGTTAAGGGCATGACTCTGATACCATGTTAGGAATCACGAACCTTCACAATGATATGATATTGTCCACTTTTAGCATAAGCTCTCATGATTTTGCTTTTGGTTTCCCGAAATGTCTCATACCAATGGAGATAGTATTTCTTACTTATAAACCTATCATCAACCCCTTAATTAGTCGATGTGGGACTTCTCTCCCAACAATTCTCTCCTCGAACAAAGTACACCATAAAGCCTCCCCTAAATACACAATTTGTTCGACGCTTAGTCACTCTGACTACATTTTCGAGACACACAACTTGTTTGTTTAACACTTGAGGATTCTATTGACATGGCTAAGTTAAAGACATGACTTTGATACCAGTTAGGAATCACGAACCTCCACAATGATACGATATTGTCCATTTTGAGCATTAGATGCATATAAATTGATATCTATCGAACTATTTCGTTCCCGTCAATGACGTGGGATTGCAATAGTGATATTGGGGAATCATTTACGAATAGATTCATTACTTGACGTCTTTCTACTAAATGTTTCAGTTTTTTCTTCACCATGGGGTTTGA

mRNA sequence

ATGGGGATCGATCTCGTCGCAGGAGGTAAGAGCAAGAAGACCAAGAGGACTGCGCCCAAATCTGATGATATCTATCTCAAGTTACTCGTCAAGCTTTACCGCTTCCTTGTTCGTCGTACTGGAAGCAAGTTCAATGCTGTGATTCTCAAGCGCCTGTTTATGAGCAGGGTTAACAAGCCTCCACTTTCTCTCTCTAGGCTTATCCAGTTCACGAAAGGAAAGGAAAGTAAGATTGCTGTCGTTGTTGGGACTATTACCGATGATATTCGTGTCTATGAAGTTCCACCATTGAAAGTTGCTGCTCTGAGGTTTACTGAGACAGCAAGGGCAAGGATTGAGAAGGCTGGTGGGGAGTGCTTGACATTTGACCAGCTTGCTTTGAGGGCTCCACTGGGTCAGAACACGGTTCTTCTTAGAGGTTCTAAGAACTCCCGGGAGGCTGTGAAGCATTTTGGTCCCGCGCCTGGTGTACCGCACAGCCATAGCAAACCGTATGTGAGGTCGAAGGGTAGGAAGTTTGAGAGGGCAAGAGGAAAGAGAAACAGCAGGGGATACAGGGTTTCTAGTCTCGACGTTGAGATTTGGTGTACGAAGTGCTCCGATTTGAAGTTTTTTCTTCACCATGGGGTTTGA

Coding sequence (CDS)

ATGGGGATCGATCTCGTCGCAGGAGGTAAGAGCAAGAAGACCAAGAGGACTGCGCCCAAATCTGATGATATCTATCTCAAGTTACTCGTCAAGCTTTACCGCTTCCTTGTTCGTCGTACTGGAAGCAAGTTCAATGCTGTGATTCTCAAGCGCCTGTTTATGAGCAGGGTTAACAAGCCTCCACTTTCTCTCTCTAGGCTTATCCAGTTCACGAAAGGAAAGGAAAGTAAGATTGCTGTCGTTGTTGGGACTATTACCGATGATATTCGTGTCTATGAAGTTCCACCATTGAAAGTTGCTGCTCTGAGGTTTACTGAGACAGCAAGGGCAAGGATTGAGAAGGCTGGTGGGGAGTGCTTGACATTTGACCAGCTTGCTTTGAGGGCTCCACTGGGTCAGAACACGGTTCTTCTTAGAGGTTCTAAGAACTCCCGGGAGGCTGTGAAGCATTTTGGTCCCGCGCCTGGTGTACCGCACAGCCATAGCAAACCGTATGTGAGGTCGAAGGGTAGGAAGTTTGAGAGGGCAAGAGGAAAGAGAAACAGCAGGGGATACAGGGTTTCTAGTCTCGACGTTGAGATTTGGTGTACGAAGTGCTCCGATTTGAAGTTTTTTCTTCACCATGGGGTTTGA

Protein sequence

MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPPLKVAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRVSSLDVEIWCTKCSDLKFFLHHGV
Homology
[Close]
BLAST of Csor.00g087630 vs. ExPASy Swiss-Prot
Match: P42791 (60S ribosomal protein L18-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2)

HSP 1 Score: 323.6 bits (828), Expect = 1.7e-87
Identity = 161/187 (86.10%), Postives = 175/187 (93.58%), Query Frame = 0 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDL+AGGKSKKTKRTAPKSDD+YLKL VKLYRFLVRRT SKFN VILKRLFMS+VNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPPLKVAALRFTETARARIEKAGGECL 120
           PLSLSRL++F  GKE KIAV+VGTITDD+RV+E+P +KV ALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRG KNSREAVKHFGPAPGVPHSHSKPYVR+KGRKFE+ARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKR 180

Query: 181 NSRGYRV 188
            SRG++V
Sbjct: 181 KSRGFKV 187

[Close]
BLAST of Csor.00g087630 vs. ExPASy Swiss-Prot
Match: Q940B0 (60S ribosomal protein L18-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18C PE=2 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 9.4e-86
Identity = 158/187 (84.49%), Postives = 175/187 (93.58%), Query Frame = 0 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDL+AGGKSKKTKRTAPKSDD+YLKLLVKLYRFLVRR+ S FNAVILKRLFMS+VNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKA 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPPLKVAALRFTETARARIEKAGGECL 120
           PLSLSRL++F  GK+ KIAV+VGTITDD+RV+E+P +KV ALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRG KNSREAVKHFGPAPGVPHS++KPYVR KGRKFE+ARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKR 180

Query: 181 NSRGYRV 188
            SRG++V
Sbjct: 181 KSRGFKV 187

[Close]
BLAST of Csor.00g087630 vs. ExPASy Swiss-Prot
Match: O65729 (60S ribosomal protein L18 (Fragment) OS=Cicer arietinum OX=3827 GN=RPL18 PE=2 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 2.6e-80
Identity = 151/184 (82.07%), Postives = 170/184 (92.39%), Query Frame = 0 

Query: 4   DLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLS 63
           DL AGGK+KKTKRT+PKS+DIYLKLLVKLYRFLVRRT S FNAVILKRLFMS+VN+PPLS
Sbjct: 1   DLKAGGKNKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLS 60

Query: 64  LSRLIQFTKGKESKIAVVVGTITDDIRVYEVPPLKVAALRFTETARARIEKAGGECLTFD 123
           LSRLI++ +GKE KI VVVG +TDDIRVY+VP +KV AL+FTETARARI+KAGGECLTFD
Sbjct: 61  LSRLIKYMQGKEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFD 120

Query: 124 QLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSR 183
           QLALR PL  +TVLLRG KN+REAVKHFGPAPGVPHSH+KPYVRSKGRKFE+ARG+R SR
Sbjct: 121 QLALRLPL-TDTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSR 180

Query: 184 GYRV 188
           G+RV
Sbjct: 181 GFRV 183

[Close]
BLAST of Csor.00g087630 vs. ExPASy Swiss-Prot
Match: O22254 (Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18A PE=3 SV=3)

HSP 1 Score: 284.6 bits (727), Expect = 8.8e-76
Identity = 143/188 (76.06%), Postives = 164/188 (87.23%), Query Frame = 0 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDL+AGGKSKKTKRT PKSDD+YLKLLVK  R+LVRRT SKFNAVILKRLFMS+VNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTEPKSDDVYLKLLVKANRYLVRRTESKFNAVILKRLFMSKVNKA 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPPLKVAALRFTETARARIEKAGGECL 120
           PLSLSRL+++  GK+ KIAV+VGT+TDD+R+ +VP L V ALRFTE+ARARI KAGGECL
Sbjct: 61  PLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIHKAGGECL 120

Query: 121 TFDQLALRAPL-GQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGK 180
           TFDQLAL  P   +NTVLLRG KN+REAVKHFGPAPGVPHSH+KPYVR  G+K E ARG+
Sbjct: 121 TFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKKIEIARGR 180

Query: 181 RNSRGYRV 188
           R SRG++V
Sbjct: 181 RRSRGFKV 188

[Close]
BLAST of Csor.00g087630 vs. ExPASy Swiss-Prot
Match: Q4GXG7 (60S ribosomal protein L18 OS=Timarcha balearica OX=79517 GN=RpL18 PE=2 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 7.0e-65
Identity = 123/188 (65.43%), Postives = 155/188 (82.45%), Query Frame = 0 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGID +     +K +RT PKS D+YL+LLVKLYR+L RRTG+KFN +ILKRLFMS++ +P
Sbjct: 1   MGID-INHKYDRKVRRTEPKSQDVYLRLLVKLYRYLARRTGAKFNKIILKRLFMSKIYRP 60

Query: 61  PLSLSRLIQFTK--GKESKIAVVVGTITDDIRVYEVPPLKVAALRFTETARARIEKAGGE 120
           P+SLS++++F K  G+E   AV+VGT+TDD R++E+P L + ALR T+TARA I KAGGE
Sbjct: 61  PISLSKVVRFMKKPGRELLTAVIVGTVTDDSRIFEIPKLSICALRVTQTARAGILKAGGE 120

Query: 121 CLTFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARG 180
            +TFDQLALR+P G  TVLL+G +N+REAVKHFGPAPGVPHSH+KP VRSKGRKFERARG
Sbjct: 121 VITFDQLALRSPTGSKTVLLQGKRNAREAVKHFGPAPGVPHSHAKPLVRSKGRKFERARG 180

Query: 181 KRNSRGYR 187
           +R S GY+
Sbjct: 181 RRRSCGYK 187

[Close]
BLAST of Csor.00g087630 vs. NCBI nr
Match: KAG6590454.1 (60S ribosomal protein L18-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 412 bits (1059), Expect = 5.22e-145
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPPLKVAALRFTETARARIEKAGGECL 120
           PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPPLKVAALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPPLKVAALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180

Query: 181 NSRGYRVSSLDVEIWCTKCSDLKFFLHHGV 210
           NSRGYRVSSLDVEIWCTKCSDLKFFLHHGV
Sbjct: 181 NSRGYRVSSLDVEIWCTKCSDLKFFLHHGV 210

[Close]
BLAST of Csor.00g087630 vs. NCBI nr
Match: XP_022961537.1 (60S ribosomal protein L18-2-like [Cucurbita moschata] >KAG7023990.1 60S ribosomal protein L18-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 361 bits (926), Expect = 4.34e-125
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPPLKVAALRFTETARARIEKAGGECL 120
           PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPPLKVAALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPPLKVAALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180

Query: 181 NSRGYRV 187
           NSRGYRV
Sbjct: 181 NSRGYRV 187

[Close]
BLAST of Csor.00g087630 vs. NCBI nr
Match: XP_022968796.1 (60S ribosomal protein L18-2-like [Cucurbita maxima] >XP_023515957.1 60S ribosomal protein L18-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 358 bits (918), Expect = 7.20e-124
Identity = 186/187 (99.47%), Postives = 186/187 (99.47%), Query Frame = 0 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPPLKVAALRFTETARARIEKAGGECL 120
           PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVP LKVAALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180

Query: 181 NSRGYRV 187
           NSRGYRV
Sbjct: 181 NSRGYRV 187

[Close]
BLAST of Csor.00g087630 vs. NCBI nr
Match: XP_022135844.1 (60S ribosomal protein L18-2-like [Momordica charantia])

HSP 1 Score: 355 bits (911), Expect = 8.40e-123
Identity = 184/187 (98.40%), Postives = 186/187 (99.47%), Query Frame = 0 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPPLKVAALRFTETARARIEKAGGECL 120
           PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVP LKVAALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSH+KPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180

Query: 181 NSRGYRV 187
           NSRG+RV
Sbjct: 181 NSRGFRV 187

[Close]
BLAST of Csor.00g087630 vs. NCBI nr
Match: XP_022969995.1 (60S ribosomal protein L18-2 [Cucurbita maxima])

HSP 1 Score: 355 bits (912), Expect = 1.54e-122
Identity = 185/187 (98.93%), Postives = 185/187 (98.93%), Query Frame = 0 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP
Sbjct: 28  MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 87

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPPLKVAALRFTETARARIEKAGGECL 120
           PLSLSRLIQF KGKESKIAVVVGTITDDIRVYEVP LKVAALRFTETARARIEKAGGECL
Sbjct: 88  PLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 147

Query: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR
Sbjct: 148 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 207

Query: 181 NSRGYRV 187
           NSRGYRV
Sbjct: 208 NSRGYRV 214

[Close]
BLAST of Csor.00g087630 vs. ExPASy TrEMBL
Match: A0A6J1HAG3 (60S ribosomal protein L18-2-like OS=Cucurbita moschata OX=3662 GN=LOC111462085 PE=3 SV=1)

HSP 1 Score: 361 bits (926), Expect = 2.10e-125
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPPLKVAALRFTETARARIEKAGGECL 120
           PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPPLKVAALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPPLKVAALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180

Query: 181 NSRGYRV 187
           NSRGYRV
Sbjct: 181 NSRGYRV 187

[Close]
BLAST of Csor.00g087630 vs. ExPASy TrEMBL
Match: A0A6J1HVV8 (60S ribosomal protein L18-2-like OS=Cucurbita maxima OX=3661 GN=LOC111467927 PE=3 SV=1)

HSP 1 Score: 358 bits (918), Expect = 3.49e-124
Identity = 186/187 (99.47%), Postives = 186/187 (99.47%), Query Frame = 0 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPPLKVAALRFTETARARIEKAGGECL 120
           PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVP LKVAALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180

Query: 181 NSRGYRV 187
           NSRGYRV
Sbjct: 181 NSRGYRV 187

[Close]
BLAST of Csor.00g087630 vs. ExPASy TrEMBL
Match: A0A6J1C2L8 (60S ribosomal protein L18-2-like OS=Momordica charantia OX=3673 GN=LOC111007696 PE=3 SV=1)

HSP 1 Score: 355 bits (911), Expect = 4.07e-123
Identity = 184/187 (98.40%), Postives = 186/187 (99.47%), Query Frame = 0 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPPLKVAALRFTETARARIEKAGGECL 120
           PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVP LKVAALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSH+KPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180

Query: 181 NSRGYRV 187
           NSRG+RV
Sbjct: 181 NSRGFRV 187

[Close]
BLAST of Csor.00g087630 vs. ExPASy TrEMBL
Match: A0A6J1I1I5 (60S ribosomal protein L18-2 OS=Cucurbita maxima OX=3661 GN=LOC111469018 PE=3 SV=1)

HSP 1 Score: 355 bits (912), Expect = 7.43e-123
Identity = 185/187 (98.93%), Postives = 185/187 (98.93%), Query Frame = 0 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP
Sbjct: 28  MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 87

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPPLKVAALRFTETARARIEKAGGECL 120
           PLSLSRLIQF KGKESKIAVVVGTITDDIRVYEVP LKVAALRFTETARARIEKAGGECL
Sbjct: 88  PLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 147

Query: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR
Sbjct: 148 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 207

Query: 181 NSRGYRV 187
           NSRGYRV
Sbjct: 208 NSRGYRV 214

[Close]
BLAST of Csor.00g087630 vs. ExPASy TrEMBL
Match: A0A6J1EUD5 (60S ribosomal protein L18-2-like OS=Cucurbita moschata OX=3662 GN=LOC111437842 PE=3 SV=1)

HSP 1 Score: 353 bits (907), Expect = 1.66e-122
Identity = 184/187 (98.40%), Postives = 184/187 (98.40%), Query Frame = 0 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGS FNAVILKRLFMSRVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSRVNKP 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPPLKVAALRFTETARARIEKAGGECL 120
           PLSLSRLIQF KGKESKIAVVVGTITDDIRVYEVP LKVAALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180

Query: 181 NSRGYRV 187
           NSRGYRV
Sbjct: 181 NSRGYRV 187

[Close]
BLAST of Csor.00g087630 vs. TAIR 10
Match: AT3G05590.1 (ribosomal protein L18 )

HSP 1 Score: 323.6 bits (828), Expect = 1.2e-88
Identity = 161/187 (86.10%), Postives = 175/187 (93.58%), Query Frame = 0 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDL+AGGKSKKTKRTAPKSDD+YLKL VKLYRFLVRRT SKFN VILKRLFMS+VNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPPLKVAALRFTETARARIEKAGGECL 120
           PLSLSRL++F  GKE KIAV+VGTITDD+RV+E+P +KV ALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRG KNSREAVKHFGPAPGVPHSHSKPYVR+KGRKFE+ARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKR 180

Query: 181 NSRGYRV 188
            SRG++V
Sbjct: 181 KSRGFKV 187

[Close]
BLAST of Csor.00g087630 vs. TAIR 10
Match: AT5G27850.1 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 317.8 bits (813), Expect = 6.7e-87
Identity = 158/187 (84.49%), Postives = 175/187 (93.58%), Query Frame = 0 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDL+AGGKSKKTKRTAPKSDD+YLKLLVKLYRFLVRR+ S FNAVILKRLFMS+VNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKA 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPPLKVAALRFTETARARIEKAGGECL 120
           PLSLSRL++F  GK+ KIAV+VGTITDD+RV+E+P +KV ALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRG KNSREAVKHFGPAPGVPHS++KPYVR KGRKFE+ARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKR 180

Query: 181 NSRGYRV 188
            SRG++V
Sbjct: 181 KSRGFKV 187

[Close]
BLAST of Csor.00g087630 vs. TAIR 10
Match: AT2G47570.1 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 198.0 bits (502), Expect = 7.7e-51
Identity = 97/135 (71.85%), Postives = 115/135 (85.19%), Query Frame = 0 

Query: 54  MSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPPLKVAALRFTETARARIE 113
           MS+VNK PLSLSRL+++  GK+ KIAV+VGT+TDD+R+ +VP L V ALRFTE+ARARI 
Sbjct: 1   MSKVNKAPLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIH 60

Query: 114 KAGGECLTFDQLALRAPL-GQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRK 173
           KAGGECLTFDQLAL  P   +NTVLLRG KN+REAVKHFGPAPGVPHSH+KPYVR  G+K
Sbjct: 61  KAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKK 120

Query: 174 FERARGKRNSRGYRV 188
            E ARG+R SRG++V
Sbjct: 121 IEIARGRRRSRGFKV 135

[Close]
BLAST of Csor.00g087630 vs. TAIR 10
Match: AT2G47570.2 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 198.0 bits (502), Expect = 7.7e-51
Identity = 97/135 (71.85%), Postives = 115/135 (85.19%), Query Frame = 0 

Query: 54  MSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPPLKVAALRFTETARARIE 113
           MS+VNK PLSLSRL+++  GK+ KIAV+VGT+TDD+R+ +VP L V ALRFTE+ARARI 
Sbjct: 1   MSKVNKAPLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIH 60

Query: 114 KAGGECLTFDQLALRAPL-GQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRK 173
           KAGGECLTFDQLAL  P   +NTVLLRG KN+REAVKHFGPAPGVPHSH+KPYVR  G+K
Sbjct: 61  KAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKK 120

Query: 174 FERARGKRNSRGYRV 188
            E ARG+R SRG++V
Sbjct: 121 IEIARGRRRSRGFKV 135

The following BLAST results are available for this feature:
BLAST of Csor.00g087630 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P427911.7e-8786.1060S ribosomal protein L18-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2[more]
Q940B09.4e-8684.4960S ribosomal protein L18-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18C PE=2 SV=1[more]
O657292.6e-8082.0760S ribosomal protein L18 (Fragment) OS=Cicer arietinum OX=3827 GN=RPL18 PE=2 SV... [more]
O222548.8e-7676.06Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18A P... [more]
Q4GXG77.0e-6565.4360S ribosomal protein L18 OS=Timarcha balearica OX=79517 GN=RpL18 PE=2 SV=1[more]
BLAST of Csor.00g087630 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6590454.15.22e-145100.0060S ribosomal protein L18-2, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022961537.14.34e-125100.0060S ribosomal protein L18-2-like [Cucurbita moschata] >KAG7023990.1 60S ribosoma... [more]
XP_022968796.17.20e-12499.4760S ribosomal protein L18-2-like [Cucurbita maxima] >XP_023515957.1 60S ribosoma... [more]
XP_022135844.18.40e-12398.4060S ribosomal protein L18-2-like [Momordica charantia][more]
XP_022969995.11.54e-12298.9360S ribosomal protein L18-2 [Cucurbita maxima][more]
BLAST of Csor.00g087630 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HAG32.10e-125100.0060S ribosomal protein L18-2-like OS=Cucurbita moschata OX=3662 GN=LOC111462085 P... [more]
A0A6J1HVV83.49e-12499.4760S ribosomal protein L18-2-like OS=Cucurbita maxima OX=3661 GN=LOC111467927 PE=... [more]
A0A6J1C2L84.07e-12398.4060S ribosomal protein L18-2-like OS=Momordica charantia OX=3673 GN=LOC111007696 ... [more]
A0A6J1I1I57.43e-12398.9360S ribosomal protein L18-2 OS=Cucurbita maxima OX=3661 GN=LOC111469018 PE=3 SV=... [more]
A0A6J1EUD51.66e-12298.4060S ribosomal protein L18-2-like OS=Cucurbita moschata OX=3662 GN=LOC111437842 P... [more]
BLAST of Csor.00g087630 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G05590.11.2e-8886.10ribosomal protein L18 [more]
AT5G27850.16.7e-8784.49Ribosomal protein L18e/L15 superfamily protein [more]
AT2G47570.17.7e-5171.85Ribosomal protein L18e/L15 superfamily protein [more]
AT2G47570.27.7e-5171.85Ribosomal protein L18e/L15 superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021131Ribosomal protein L18e/L15PPFAMPF17135Ribosomal_L18coord: 2..187
e-value: 5.8E-94
score: 312.8
NoneNo IPR availableGENE3D3.100.10.10coord: 1..187
e-value: 1.7E-99
score: 332.8
NoneNo IPR availablePANTHERPTHR10934:SF1860S RIBOSOMAL PROTEIN L18-1-RELATEDcoord: 1..187
IPR000039Ribosomal protein L18ePANTHERPTHR1093460S RIBOSOMAL PROTEIN L18coord: 1..187
IPR036227Ribosomal L18e/L15P superfamilySUPERFAMILY52080Ribosomal proteins L15p and L18ecoord: 20..139

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g087630.m01Csor.00g087630.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005737 cytoplasm
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003729 mRNA binding
molecular_function GO:0003735 structural constituent of ribosome