Csor.00g084700 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTAAGCTAACTGGAAATGGTGTTTACTTTATAAGGTACGTTCTTCTCGGCTTGGTTTTATATGTTTTTTTTGTAATTTCCTACATTGGTTGGGGAGGAGAACAAACACCCTTTATAAGGGTGTGGAAACCTTTCTATAGTAGATGCGTTTTAAAGTCTTGAGAGGAAGGCTAAAAGGAAAAGTTCAAGAAGGACAATATTTGCTAGAAGTGGGTCTAGATGGTTACAAATGGTGTCAGAGCCAGACATTGGGTGGTGTGCTAGTAAGGATGCTGGGCCTCGAAAGGGATGGATTTGGTGGGAGTCTTATGTCGATTGGAGAATGGAACGAGTGCTAGTGAGGACGCTGGGACCTAAAGGGATGGATTGCGATATCCCACTAGGGAGGAGAACGAAACACCCTTAGAAAGGGGGGTGGATTTTGATATCCTACTGGGGAGGAGAACGAAACACCCTTAGAAGGGGGTCGATTGTGATATCCTACTGGGGAGGAGAACGAAACACCCTTAGAAGGGGGTCGATTGTGATATCCTATGGGGGAGGAGAACGAAATACCCTTTATAAGGGTGTGAAAACTTTTCCCTACCATTTTAAGGTCTTGAGGGGAAGCCTAAAAGGGAAAGCCCAAAGAGAACAATGTTTGCTAGTGATGGACCCAAATGGTATTAGAGCCGGACACCGGCAATGTGCTAGCGAGGAGGCTGTTCCTCGAACGGGGTAGACACGAGGCGGTGTGCTAGTAAGGAGGGGCCCCGAAGGGGGTTGGATTTGGTGGAAGTCCCACGTCGATTGGAGAATGGAACGAGTGCCAGCAAGGACACTGGGCCCTGAAGGGGGGTGGATTGTGATATCCCACTGGGAAGGAGAACGAAACACCCTTAAAAGGGGGTGGATTGTGATATCCCATTGGGAAGGAGAACGAAACACCCTTAGAAGGGGGTAGATTGTGATATCCTACGGGAGAGGAGAACGAAACACCCTTTATAAGGGTGTGAAAACTTTTCCCTAACAGACACGTTTTAAAGCCTTGACTTGTCTAATTTAGCAATGCAATAGCAGGCGACTGAGCTCTTTGGTTGCATCCGAGCAACTTAAAGCACGAGCAACTGCACCGATGACGGTGAAGAACGTGATAGCAACTGTGGAAACGAGCGGTTCGGATGATATCAAGGCAGTTGAACAGAAGAACATATTTTGGATGAAAGATCCAAAGAGTGGGAACTGGATTCCTGAGAACCACTTCGGAGAGATTGATGTGGTCGAATTGAGGGAGAAACTGCTGTCTAAAACTAAGAAGCTGTTCTAA ATGGCTAAGCTAACTGGAAATGGTGTTTACTTTATAAGGCGACTGAGCTCTTTGGTTGCATCCGAGCAACTTAAAGCACGAGCAACTGCACCGATGACGGTGAAGAACGTGATAGCAACTGTGGAAACGAGCGGTTCGGATGATATCAAGGCAGTTGAACAGAAGAACATATTTTGGATGAAAGATCCAAAGAGTGGGAACTGGATTCCTGAGAACCACTTCGGAGAGATTGATGTGGTCGAATTGAGGGAGAAACTGCTGTCTAAAACTAAGAAGCTGTTCTAA ATGGCTAAGCTAACTGGAAATGGTGTTTACTTTATAAGGCGACTGAGCTCTTTGGTTGCATCCGAGCAACTTAAAGCACGAGCAACTGCACCGATGACGGTGAAGAACGTGATAGCAACTGTGGAAACGAGCGGTTCGGATGATATCAAGGCAGTTGAACAGAAGAACATATTTTGGATGAAAGATCCAAAGAGTGGGAACTGGATTCCTGAGAACCACTTCGGAGAGATTGATGTGGTCGAATTGAGGGAGAAACTGCTGTCTAAAACTAAGAAGCTGTTCTAA MAKLTGNGVYFIRRLSSLVASEQLKARATAPMTVKNVIATVETSGSDDIKAVEQKNIFWMKDPKSGNWIPENHFGEIDVVELREKLLSKTKKLF Homology
BLAST of Csor.00g084700 vs. NCBI nr
Match: KAG6575415.1 (hypothetical protein SDJN03_26054, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 187 bits (476), Expect = 7.09e-60 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of Csor.00g084700 vs. NCBI nr
Match: KAE8646489.1 (hypothetical protein Csa_015817 [Cucumis sativus]) HSP 1 Score: 111 bits (278), Expect = 7.17e-30 Identity = 57/79 (72.15%), Postives = 64/79 (81.01%), Query Frame = 0
BLAST of Csor.00g084700 vs. NCBI nr
Match: KAA0059359.1 (putative Senescence-associated protein 21 [Cucumis melo var. makuwa] >TYK03967.1 putative Senescence-associated protein 21 [Cucumis melo var. makuwa]) HSP 1 Score: 107 bits (266), Expect = 4.57e-28 Identity = 55/77 (71.43%), Postives = 62/77 (80.52%), Query Frame = 0
BLAST of Csor.00g084700 vs. NCBI nr
Match: EOY27380.1 (Senescence-associated gene 21, putative [Theobroma cacao]) HSP 1 Score: 85.1 bits (209), Expect = 2.70e-19 Identity = 45/95 (47.37%), Postives = 59/95 (62.11%), Query Frame = 0
BLAST of Csor.00g084700 vs. NCBI nr
Match: XP_039070777.1 (uncharacterized protein LOC120217767 isoform X1 [Hibiscus syriacus] >KAE8715086.1 Eukaryotic translation initiation factor 2B family protein [Hibiscus syriacus]) HSP 1 Score: 85.1 bits (209), Expect = 2.93e-19 Identity = 44/92 (47.83%), Postives = 57/92 (61.96%), Query Frame = 0
BLAST of Csor.00g084700 vs. ExPASy TrEMBL
Match: A0A0A0K7L4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448050 PE=4 SV=1) HSP 1 Score: 134 bits (338), Expect = 3.73e-39 Identity = 68/93 (73.12%), Postives = 77/93 (82.80%), Query Frame = 0
BLAST of Csor.00g084700 vs. ExPASy TrEMBL
Match: A0A5D3BWU2 (Putative Senescence-associated protein 21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001640 PE=4 SV=1) HSP 1 Score: 107 bits (266), Expect = 2.21e-28 Identity = 55/77 (71.43%), Postives = 62/77 (80.52%), Query Frame = 0
BLAST of Csor.00g084700 vs. ExPASy TrEMBL
Match: A0A061GBY1 (Senescence-associated gene 21, putative OS=Theobroma cacao OX=3641 GN=TCM_029240 PE=3 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.31e-19 Identity = 45/95 (47.37%), Postives = 59/95 (62.11%), Query Frame = 0
BLAST of Csor.00g084700 vs. ExPASy TrEMBL
Match: A0A6A3BDL0 (Eukaryotic translation initiation factor 2B family protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110187pilonHSYRG00534 PE=3 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.42e-19 Identity = 44/92 (47.83%), Postives = 57/92 (61.96%), Query Frame = 0
BLAST of Csor.00g084700 vs. ExPASy TrEMBL
Match: A0A6J1B6Z6 (uncharacterized protein LOC110424687 OS=Herrania umbratica OX=108875 GN=LOC110424687 PE=3 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 5.31e-19 Identity = 46/92 (50.00%), Postives = 61/92 (66.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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