Csor.00g083080 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g083080
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Pectate lyase
Location	Csor_Chr05: 1013958 .. 1015413 (-)
RNA-Seq Expression	Csor.00g083080
Synteny	Csor.00g083080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCGCCATTTCATCTTCTCCAGTCGCCGACCCTGAACTAGTCGTCCAAGAAGTTCTCTCGTGAGTTCTTTTCCAATTCTGAAACTTTGAACACGTATTAGTGGGAACTTTTTTGTGAACATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGGTCATGGTTTCAGGAGCATCAACAATGCAACAACAAGAAGGAATTTGGGGTTCCTTTCCTGTGGAACTGGAAACCCAATAGACGACTGTTGGCGGTGCGACCCCAATTGGGAGAAGAATCGTAAGCGTCTAGCCGACTGCGGCATTGGGTTTCGGGAAGCGAGCCATCGGCGGCAAAAACGGGAAATTCTACGTAGTCACTGACCCATCCGACAAGGACAGTGGTGAACCCAAACCAGGCACTCTTCGTCACGCCGTAATCCAAAAGAACCCTTATGGATCACCTTTTAAACGCGACATGGTCATCAAATTAAAAGCAGAGCTGCTGATGAACTCTTTCAAAACCATCGACGGTCGGGGTGTGTCGGTCCACATAGCCGGCGGGCCTTGCATTACAATTCAGTATGTGACCAACATTATCATCCACGGCATCAACATTCACGACTGCAAGCAAGGTGTGGAACACGTACGTTAGAGATTCGCCGGAGCATTATGGTTGGAGGACTCTGTCGGACGGCGATGGGTTTCGATATTTGGAGGCAGCCATGTTTGGATCGACCATTGCTCTTTGTCGAATTGTCGTGATGGGCTGATTGATGCGATTCATGGGTCTACGGCCATCACTGTTTCCAACAATTACATGACCCACCATAACAAAGTTATGCTTTTTTTTTTGTTTGTAGGACACAGTGATTCGTATACTCAAGACAAGAACATGCAAGTCACCATTGCTTTCAACCATTTTTGGTGAGGGCCTTGTCCAGAGAATGCCACGGTAAGTTCAAATTTAAAATGGCTTGATCTCGTGAATGCCACTGTGTGGGAAGTCATTGGGTTTTCCTTATTTTGGCAGATGCCGGCATGGGTACTTTCATGTGGTGAACAATGACTACACTCATTGGATAATGTACGCCATTGGTTGGAAGTGCTTCCCCTACCATCAATAGCCAAGGGAACAGATACCTTGCTCCAAATAACCGAGATAGGAAAGAGGTCAGAATTTAGATTCCAATTATTTCTTTTAAAACTTGATTACAAAAGATGAGAGTTTATGAACTTAAGTGGGTGATGGTTTCAGGTCACAAAGCGGGAGGATGCACCACAAAGCAAATGGAAGAATTGGAATTGGAGGTCAAGTGGAGATTTGATGTTGAATGGAGCATTCTTCACGAGATCGGGTGCTGGATCGTCGTCTAGCTACGCGAGGGCGTCGAGCTTGAGTGCGAAGTCGTCGTCGTTGGTGAGTACGATGACGGCGGGAGCAGGGGTGCTGCGGTGCCGAAAGGGGTCCCGGTGTTAG

mRNA sequence

ATGTGCGCCATTTCATCTTCTCCAGTCGCCGACCCTGAACTAGTCGTCCAAGAAGTTCTCTCGAGCATCAACAATGCAACAACAAGAAGGAATTTGGGGTTCCTTTCCTGTGGAACTGGAAACCCAATAGACGACTGTTGGCGGTGCGACCCCAATTGGGAGAAGAATCTCACTGACCCATCCGACAAGGACAGTGGTGAACCCAAACCAGGCACTCTTCGTCACGCCGTAATCCAAAAGAACCCTTATGGATCACCTTTTAAACGCGACATGGTCATCAAATTAAAAGCAGAGCTGCTGATGAACTCTTTCAAAACCATCGACGGTCGGGGTGTGTCGGTCCACATAGCCGGCGGGCCTTGCATTACAATTCAGTATGTGACCAACATTATCATCCACGGCATCAACATTCACGACTGCAAGCAAGGTGTGGAACACGACACAGTGATTCGTATACTCAAGACAAGAACATGCAAGTCACCATTGCTTTCAACCATTTTTGGTGAGGGCCTTGTCCAGAGAATGCCACGTGCTTCCCCTACCATCAATAGCCAAGGGAACAGATACCTTGCTCCAAATAACCGAGATAGGAAAGAGGTCACAAAGCGGGAGGATGCACCACAAAGCAAATGGAAGAATTGGAATTGGAGGTCAAGTGGAGATTTGATGTTGAATGGAGCATTCTTCACGAGATCGGGTGCTGGATCGTCGTCTAGCTACGCGAGGGCGTCGAGCTTGAGTGCGAAGTCGTCGTCGTTGGTGAGTACGATGACGGCGGGAGCAGGGGTGCTGCGGTGCCGAAAGGGGTCCCGGTGTTAG

Coding sequence (CDS)

ATGTGCGCCATTTCATCTTCTCCAGTCGCCGACCCTGAACTAGTCGTCCAAGAAGTTCTCTCGAGCATCAACAATGCAACAACAAGAAGGAATTTGGGGTTCCTTTCCTGTGGAACTGGAAACCCAATAGACGACTGTTGGCGGTGCGACCCCAATTGGGAGAAGAATCTCACTGACCCATCCGACAAGGACAGTGGTGAACCCAAACCAGGCACTCTTCGTCACGCCGTAATCCAAAAGAACCCTTATGGATCACCTTTTAAACGCGACATGGTCATCAAATTAAAAGCAGAGCTGCTGATGAACTCTTTCAAAACCATCGACGGTCGGGGTGTGTCGGTCCACATAGCCGGCGGGCCTTGCATTACAATTCAGTATGTGACCAACATTATCATCCACGGCATCAACATTCACGACTGCAAGCAAGGTGTGGAACACGACACAGTGATTCGTATACTCAAGACAAGAACATGCAAGTCACCATTGCTTTCAACCATTTTTGGTGAGGGCCTTGTCCAGAGAATGCCACGTGCTTCCCCTACCATCAATAGCCAAGGGAACAGATACCTTGCTCCAAATAACCGAGATAGGAAAGAGGTCACAAAGCGGGAGGATGCACCACAAAGCAAATGGAAGAATTGGAATTGGAGGTCAAGTGGAGATTTGATGTTGAATGGAGCATTCTTCACGAGATCGGGTGCTGGATCGTCGTCTAGCTACGCGAGGGCGTCGAGCTTGAGTGCGAAGTCGTCGTCGTTGGTGAGTACGATGACGGCGGGAGCAGGGGTGCTGCGGTGCCGAAAGGGGTCCCGGTGTTAG

Protein sequence

MCAISSSPVADPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKNLTDPSDKDSGEPKPGTLRHAVIQKNPYGSPFKRDMVIKLKAELLMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQGVEHDTVIRILKTRTCKSPLLSTIFGEGLVQRMPRASPTINSQGNRYLAPNNRDRKEVTKREDAPQSKWKNWNWRSSGDLMLNGAFFTRSGAGSSSSYARASSLSAKSSSLVSTMTAGAGVLRCRKGSRC

Homology

[Close]

BLAST of Csor.00g083080 vs. ExPASy Swiss-Prot
Match: Q9FXD8 (Probable pectate lyase 5 OS=Arabidopsis thaliana OX=3702 GN=At1g67750 PE=2 SV=2)

HSP 1 Score: 320.1 bits (819), Expect = 2.4e-86
Identity = 192/386 (49.74%), Postives = 218/386 (56.48%), Query Frame = 0


Query: 4   ISSSPVADPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKN------- 63
           I+S+PV++PELVVQEV   IN   +RRNLG LSCGTGNPIDDCWRCDP WEKN       
Sbjct: 25  IASTPVSEPELVVQEVNEKIN--ASRRNLGVLSCGTGNPIDDCWRCDPKWEKNRQRLADC 84

Query: 64  ------------------LTDPSDKDSGEPKPGTLRHAVIQKNPYGSPFKRDMVIKLKAE 123
                             +TD SDKD   PKPGTLRHAVIQ  P    F RDMVIKLK E
Sbjct: 85  AIGFGKHAIGGRDGKIYVVTDSSDKDVVNPKPGTLRHAVIQDEPLWIIFARDMVIKLKEE 144

Query: 124 LLMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQ---------------- 183
           L+MNSFKTIDGRG SVHIAGG CIT+QYVTNIIIHG+NIHDCK+                
Sbjct: 145 LIMNSFKTIDGRGASVHIAGGACITVQYVTNIIIHGVNIHDCKRKGNAYVRDSPSHYGWR 204

Query: 184 --------------------------------GVEHDTVIRI------------------ 243
                                            +   T I I                  
Sbjct: 205 TASDGDAVSIFGGSHVWVDHCSLSNCADGLIDAIHGSTAITISNNYLSHHNKVMLLGHSD 264

Query: 244 --LKTRTCKSPLLSTIFGEGLVQRMPR------------------------ASPTINSQG 273
              + +  +  +    FGEGLVQRMPR                        A+PTINSQG
Sbjct: 265 SYTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWQMYAIGGSAAPTINSQG 324

[Close]

BLAST of Csor.00g083080 vs. ExPASy Swiss-Prot
Match: Q9C5M8 (Probable pectate lyase 18 OS=Arabidopsis thaliana OX=3702 GN=At4g24780 PE=2 SV=2)

HSP 1 Score: 306.2 bits (783), Expect = 3.7e-82
Identity = 183/385 (47.53%), Postives = 214/385 (55.58%), Query Frame = 0


Query: 6   SSPVADPELVVQEVLSSIN-NATTRRNLGFLSCGTGNPIDDCWRCDPNWEKN-------- 65
           SSPV DPE VV+EV  SIN +   RR LG+LSC TGNPIDDCWRCDP+WE++        
Sbjct: 24  SSPVPDPESVVEEVHKSINASVAGRRKLGYLSCTTGNPIDDCWRCDPHWEQHRQRLADCA 83

Query: 66  -----------------LTDPSDKDSGEPKPGTLRHAVIQKNPYGSPFKRDMVIKLKAEL 125
                            +TD  + +   PKPGTLRHAV+Q  P    F+RDM I+LK EL
Sbjct: 84  IGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEPLWIIFQRDMTIQLKEEL 143

Query: 126 LMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQG---------------- 185
           +MNSFKTIDGRG SVHI+GGPCITIQYVTNIIIHGI+IHDCKQG                
Sbjct: 144 IMNSFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCKQGGNAMVRSSPRHFGWRT 203

Query: 186 ----------------------------------------------VEHDTVIRI----- 245
                                                           HD V+ +     
Sbjct: 204 ISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSNNHMTHHDKVMLLGHSDT 263

Query: 246 -LKTRTCKSPLLSTIFGEGLVQRMPR------------------------ASPTINSQGN 273
             + +  +  +    FGEGLVQRMPR                        A+PTINSQGN
Sbjct: 264 YSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGN 323

[Close]

BLAST of Csor.00g083080 vs. ExPASy Swiss-Prot
Match: Q93Z25 (Probable pectate lyase 22 OS=Arabidopsis thaliana OX=3702 GN=At5g63180 PE=2 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 2.6e-80
Identity = 183/387 (47.29%), Postives = 219/387 (56.59%), Query Frame = 0


Query: 5   SSSPVADPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKN-------- 64
           SS PV+DPELVV+EV   IN + +RR LGF SCG+GNPIDDCWRCD +WEKN        
Sbjct: 46  SSLPVSDPELVVEEVHRKINESISRRKLGFFSCGSGNPIDDCWRCDKDWEKNRKRLADCG 105

Query: 65  -----------------LTDPSDKDSGEPKPGTLRHAVIQKNPYGSPFKRDMVIKLKAEL 124
                            +TDP + D   P+PGTLR+AVIQ  P    FKRDM I+LK EL
Sbjct: 106 IGFGKNAIGGRDGEIYVVTDPGNDDPVNPRPGTLRYAVIQDEPLWIIFKRDMTIQLKEEL 165

Query: 125 LMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQG---------------- 184
           +MNSFKT+DGRG SVHI+GGPCITIQYVTNIIIHG++IHDCKQG                
Sbjct: 166 IMNSFKTLDGRGASVHISGGPCITIQYVTNIIIHGLHIHDCKQGGNTYVRDSPEHYGYRT 225

Query: 185 ----------------VEH-------DTVIRILKTRTC------------KSPLLS---- 244
                           V+H       D +I  ++  T             K  LL     
Sbjct: 226 VSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIRGSTAITISNNYLTHHNKVMLLGHSDT 285

Query: 245 ---------TI----FGEGLVQRMPR------------------------ASPTINSQGN 273
                    TI    FGEGLVQRMPR                        A+PTINSQGN
Sbjct: 286 YEQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGN 345

[Close]

BLAST of Csor.00g083080 vs. ExPASy Swiss-Prot
Match: O24554 (Pectate lyase OS=Zinnia violacea OX=34245 PE=1 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 2.1e-77
Identity = 176/385 (45.71%), Postives = 206/385 (53.51%), Query Frame = 0


Query: 5   SSSPVADPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKN-------- 64
           SSSP   P  +V EV  SIN   +RRNLG+LSCGTGNPIDDCWRCDPNW  N        
Sbjct: 19  SSSPSRTPHAIVNEVHKSIN--ASRRNLGYLSCGTGNPIDDCWRCDPNWANNRQRLADCA 78

Query: 65  -----------------LTDPSDKDSGEPKPGTLRHAVIQKNPYGSPFKRDMVIKLKAEL 124
                            +TDP + D   P PGTLR+AVIQ  P    FKRDMVI+L+ EL
Sbjct: 79  IGFGKNAMGGRNGRIYVVTDPGNDDPVNPVPGTLRYAVIQDEPLWIIFKRDMVIQLRQEL 138

Query: 125 LMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQG---------------- 184
           +MNS KTIDGRGV+VHI  GPCITI Y +NIIIHGI+IHDCKQ                 
Sbjct: 139 VMNSHKTIDGRGVNVHIGNGPCITIHYASNIIIHGIHIHDCKQAGNGNIRNSPHHSGWWT 198

Query: 185 ----------------------------------------------VEHDTVIRI----- 244
                                                           HD V+ +     
Sbjct: 199 QSDGDGISIFASKDIWIDHNSLSNCHDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDS 258

Query: 245 -LKTRTCKSPLLSTIFGEGLVQRMPR------------------------ASPTINSQGN 273
             + +  +  +    FGEGLVQRMPR                        ASPTI SQGN
Sbjct: 259 YTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGN 318

[Close]

BLAST of Csor.00g083080 vs. ExPASy Swiss-Prot
Match: Q9LTZ0 (Putative pectate lyase 11 OS=Arabidopsis thaliana OX=3702 GN=At3g27400 PE=3 SV=2)

HSP 1 Score: 282.7 bits (722), Expect = 4.3e-75
Identity = 170/381 (44.62%), Postives = 204/381 (53.54%), Query Frame = 0


Query: 9   VADPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKN------------ 68
           V DP LVV +V  S+ NA +RR+L +LSC TGNPIDDCWRCDPNWE N            
Sbjct: 33  VQDPNLVVDDVNRSVFNA-SRRSLAYLSCRTGNPIDDCWRCDPNWETNRQRLADCAIGFG 92

Query: 69  -------------LTDPSDKDSGEPKPGTLRHAVIQKNPYGSPFKRDMVIKLKAELLMNS 128
                        +TDP++ D   P+PGTLR+AV Q+ P    FKRDMVI+LK EL++ S
Sbjct: 93  KNAIGGRKGRIYVVTDPANDDPVNPRPGTLRYAVTQEEPLWIIFKRDMVIRLKKELIITS 152

Query: 129 FKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQG-------------------- 188
           FKTIDGRG SVHI  GPC+ I Y TNIIIHGINIHDCK G                    
Sbjct: 153 FKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHDCKPGSGGMIKDGPHHTGWWMQSDG 212

Query: 189 ------------------------------------------VEHDTVIRI------LKT 248
                                                       HD V+ +       + 
Sbjct: 213 DAVAIFGGKHVWIDHCSLSNCDDGLIDAIHGSTAITISNNHMTHHDKVMLLGHSDSYTQD 272

Query: 249 RTCKSPLLSTIFGEGLVQRMPR------------------------ASPTINSQGNRYLA 273
           +  +  +    FGEGLVQRMPR                        ASPTI SQGNR+LA
Sbjct: 273 KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFLA 332

[Close]

BLAST of Csor.00g083080 vs. NCBI nr
Match: KAG6598424.1 (putative pectate lyase 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 545 bits (1404), Expect = 1.56e-195
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0


Query: 1   MCAISSSPVADPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKNLTDP 60
           MCAISSSPVADPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKNLTDP
Sbjct: 1   MCAISSSPVADPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKNLTDP 60

Query: 61  SDKDSGEPKPGTLRHAVIQKNPYGSPFKRDMVIKLKAELLMNSFKTIDGRGVSVHIAGGP 120
           SDKDSGEPKPGTLRHAVIQKNPYGSPFKRDMVIKLKAELLMNSFKTIDGRGVSVHIAGGP
Sbjct: 61  SDKDSGEPKPGTLRHAVIQKNPYGSPFKRDMVIKLKAELLMNSFKTIDGRGVSVHIAGGP 120

Query: 121 CITIQYVTNIIIHGINIHDCKQGVEHDTVIRILKTRTCKSPLLSTIFGEGLVQRMPRASP 180
           CITIQYVTNIIIHGINIHDCKQGVEHDTVIRILKTRTCKSPLLSTIFGEGLVQRMPRASP
Sbjct: 121 CITIQYVTNIIIHGINIHDCKQGVEHDTVIRILKTRTCKSPLLSTIFGEGLVQRMPRASP 180

Query: 181 TINSQGNRYLAPNNRDRKEVTKREDAPQSKWKNWNWRSSGDLMLNGAFFTRSGAGSSSSY 240
           TINSQGNRYLAPNNRDRKEVTKREDAPQSKWKNWNWRSSGDLMLNGAFFTRSGAGSSSSY
Sbjct: 181 TINSQGNRYLAPNNRDRKEVTKREDAPQSKWKNWNWRSSGDLMLNGAFFTRSGAGSSSSY 240

Query: 241 ARASSLSAKSSSLVSTMTAGAGVLRCRKGSRC 272
           ARASSLSAKSSSLVSTMTAGAGVLRCRKGSRC
Sbjct: 241 ARASSLSAKSSSLVSTMTAGAGVLRCRKGSRC 272

[Close]

BLAST of Csor.00g083080 vs. NCBI nr
Match: KAG6598251.1 (putative pectate lyase 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 421 bits (1081), Expect = 1.56e-144
Identity = 248/389 (63.75%), Postives = 251/389 (64.52%), Query Frame = 0


Query: 1   MCAISSSPVADPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKN---- 60
           MCAISSSPVADPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKN    
Sbjct: 1   MCAISSSPVADPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKNRKRL 60

Query: 61  ---------------------LTDPSDKDSGEPKPGTLRHAVIQKNPYGSPFKRDMVIKL 120
                                +TDPSDKD   PKPGTLRHAVIQK P    FKRDMVIKL
Sbjct: 61  ADCGIGFGKRAIGGKNGKFYVVTDPSDKDVVNPKPGTLRHAVIQKEPLWITFKRDMVIKL 120

Query: 121 KAELLMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQG--------VEH- 180
           KAELLMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQG         EH 
Sbjct: 121 KAELLMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQGGNTYVRDSPEHY 180

Query: 181 --------DTV---------IRILKTRTCKSPLLSTI----------------------- 240
                   D V         I       C+  L+  I                       
Sbjct: 181 GWRTLSDGDGVSIFGGSHVWIDHCSLSNCRDGLIDAIHGSTAITVSNNYMTHHNKVMLLG 240

Query: 241 -------------------FGEGLVQRMPR------------------------ASPTIN 272
                              FGEGLVQRMPR                        ASPTIN
Sbjct: 241 HSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWIMYAIGGSASPTIN 300

[Close]

BLAST of Csor.00g083080 vs. NCBI nr
Match: KAG7029228.1 (putative pectate lyase 5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 421 bits (1081), Expect = 2.80e-144
Identity = 248/389 (63.75%), Postives = 251/389 (64.52%), Query Frame = 0


Query: 1   MCAISSSPVADPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKN---- 60
           MCAISSSPVADPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKN    
Sbjct: 18  MCAISSSPVADPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKNRKRL 77

Query: 61  ---------------------LTDPSDKDSGEPKPGTLRHAVIQKNPYGSPFKRDMVIKL 120
                                +TDPSDKD   PKPGTLRHAVIQK P    FKRDMVIKL
Sbjct: 78  ADCGIGFGKRAIGGKNGKFYVVTDPSDKDVVNPKPGTLRHAVIQKEPLWITFKRDMVIKL 137

Query: 121 KAELLMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQG--------VEH- 180
           KAELLMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQG         EH 
Sbjct: 138 KAELLMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQGGNTYVRDSPEHY 197

Query: 181 --------DTV---------IRILKTRTCKSPLLSTI----------------------- 240
                   D V         I       C+  L+  I                       
Sbjct: 198 GWRTLSDGDGVSIFGGSHVWIDHCSLSNCRDGLIDAIHGSTAITVSNNYMTHHNKVMLLG 257

Query: 241 -------------------FGEGLVQRMPR------------------------ASPTIN 272
                              FGEGLVQRMPR                        ASPTIN
Sbjct: 258 HSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWIMYAIGGSASPTIN 317

[Close]

BLAST of Csor.00g083080 vs. NCBI nr
Match: XP_023545498.1 (probable pectate lyase 5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 419 bits (1078), Expect = 7.99e-144
Identity = 247/389 (63.50%), Postives = 251/389 (64.52%), Query Frame = 0


Query: 1   MCAISSSPVADPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKN---- 60
           MCAISSSPV+DPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKN    
Sbjct: 18  MCAISSSPVSDPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKNRKRL 77

Query: 61  ---------------------LTDPSDKDSGEPKPGTLRHAVIQKNPYGSPFKRDMVIKL 120
                                +TDPSDKD   PKPGTLRHAVIQK P    FKRDMVIKL
Sbjct: 78  ADCGIGFGKRAIGGKNGKFYVVTDPSDKDVVNPKPGTLRHAVIQKEPLWITFKRDMVIKL 137

Query: 121 KAELLMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQG--------VEH- 180
           KAELLMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQG         EH 
Sbjct: 138 KAELLMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQGGNTYVRDSPEHY 197

Query: 181 --------DTV---------IRILKTRTCKSPLLSTI----------------------- 240
                   D V         I       C+  L+  I                       
Sbjct: 198 GWRTLSDGDGVSIFGGSHVWIDHCSLSNCRDGLIDAIHGSTAITVSNNYMTHHNKVMLLG 257

Query: 241 -------------------FGEGLVQRMPR------------------------ASPTIN 272
                              FGEGLVQRMPR                        ASPTIN
Sbjct: 258 HSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWIMYAIGGSASPTIN 317

[Close]

BLAST of Csor.00g083080 vs. NCBI nr
Match: XP_022996659.1 (probable pectate lyase 5 [Cucurbita maxima])

HSP 1 Score: 419 bits (1078), Expect = 7.99e-144
Identity = 247/389 (63.50%), Postives = 251/389 (64.52%), Query Frame = 0


Query: 1   MCAISSSPVADPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKN---- 60
           MC+ISSSPVADPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKN    
Sbjct: 18  MCSISSSPVADPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKNRKRL 77

Query: 61  ---------------------LTDPSDKDSGEPKPGTLRHAVIQKNPYGSPFKRDMVIKL 120
                                +TDPSDKD   PKPGTLRHAVIQK P    FKRDMVIKL
Sbjct: 78  ADCGIGFGKRAIGGKNGKFYVVTDPSDKDVVNPKPGTLRHAVIQKEPLWITFKRDMVIKL 137

Query: 121 KAELLMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQG--------VEH- 180
           KAELLMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQG         EH 
Sbjct: 138 KAELLMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQGGNTYVRDSPEHY 197

Query: 181 --------DTV---------IRILKTRTCKSPLLSTI----------------------- 240
                   D V         I       C+  L+  I                       
Sbjct: 198 GWRTLSDGDGVSIFGGSHVWIDHCSLSNCRDGLIDAIHGSTAITVSNNYMTHHNKVMLLG 257

Query: 241 -------------------FGEGLVQRMPR------------------------ASPTIN 272
                              FGEGLVQRMPR                        ASPTIN
Sbjct: 258 HSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWIMYAIGGSASPTIN 317

[Close]

BLAST of Csor.00g083080 vs. ExPASy TrEMBL
Match: A0A6J1K9C7 (Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111491836 PE=3 SV=1)

HSP 1 Score: 419 bits (1078), Expect = 3.87e-144
Identity = 247/389 (63.50%), Postives = 251/389 (64.52%), Query Frame = 0


Query: 1   MCAISSSPVADPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKN---- 60
           MC+ISSSPVADPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKN    
Sbjct: 18  MCSISSSPVADPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKNRKRL 77

Query: 61  ---------------------LTDPSDKDSGEPKPGTLRHAVIQKNPYGSPFKRDMVIKL 120
                                +TDPSDKD   PKPGTLRHAVIQK P    FKRDMVIKL
Sbjct: 78  ADCGIGFGKRAIGGKNGKFYVVTDPSDKDVVNPKPGTLRHAVIQKEPLWITFKRDMVIKL 137

Query: 121 KAELLMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQG--------VEH- 180
           KAELLMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQG         EH 
Sbjct: 138 KAELLMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQGGNTYVRDSPEHY 197

Query: 181 --------DTV---------IRILKTRTCKSPLLSTI----------------------- 240
                   D V         I       C+  L+  I                       
Sbjct: 198 GWRTLSDGDGVSIFGGSHVWIDHCSLSNCRDGLIDAIHGSTAITVSNNYMTHHNKVMLLG 257

Query: 241 -------------------FGEGLVQRMPR------------------------ASPTIN 272
                              FGEGLVQRMPR                        ASPTIN
Sbjct: 258 HSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWIMYAIGGSASPTIN 317

[Close]

BLAST of Csor.00g083080 vs. ExPASy TrEMBL
Match: A0A6J1HD44 (Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111462874 PE=3 SV=1)

HSP 1 Score: 419 bits (1078), Expect = 3.87e-144
Identity = 247/389 (63.50%), Postives = 251/389 (64.52%), Query Frame = 0


Query: 1   MCAISSSPVADPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKN---- 60
           MCAISSSPVADP+LVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKN    
Sbjct: 18  MCAISSSPVADPQLVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKNRKRL 77

Query: 61  ---------------------LTDPSDKDSGEPKPGTLRHAVIQKNPYGSPFKRDMVIKL 120
                                +TDPSDKD   PKPGTLRHAVIQK P    FKRDMVIKL
Sbjct: 78  ADCGIGFGKRAIGGKNGKFYVVTDPSDKDVVNPKPGTLRHAVIQKEPLWITFKRDMVIKL 137

Query: 121 KAELLMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQG--------VEH- 180
           KAELLMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQG         EH 
Sbjct: 138 KAELLMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQGGNTYVRDSPEHY 197

Query: 181 --------DTV---------IRILKTRTCKSPLLSTI----------------------- 240
                   D V         I       C+  L+  I                       
Sbjct: 198 GWRTLSDGDGVSIFGGSHVWIDHCSLSNCRDGLIDAIHGSTAITVSNNYMTHHNKVMLLG 257

Query: 241 -------------------FGEGLVQRMPR------------------------ASPTIN 272
                              FGEGLVQRMPR                        ASPTIN
Sbjct: 258 HSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWIMYAIGGSASPTIN 317

[Close]

BLAST of Csor.00g083080 vs. ExPASy TrEMBL
Match: A0A5A7V5E9 (Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001810 PE=3 SV=1)

HSP 1 Score: 385 bits (988), Expect = 1.05e-130
Identity = 228/390 (58.46%), Postives = 241/390 (61.79%), Query Frame = 0


Query: 1   MCAISSS-PVADPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKN--- 60
           MC+ISSS PV DP+LV QEVL+SINNATTRRNLGFLSC TGNPIDDCWRCD NWEKN   
Sbjct: 1   MCSISSSSPVPDPDLVAQEVLTSINNATTRRNLGFLSCRTGNPIDDCWRCDANWEKNRKR 60

Query: 61  ----------------------LTDPSDKDSGEPKPGTLRHAVIQKNPYGSPFKRDMVIK 120
                                 +TDPSD D   PKPGTLRHAVIQK P    FKRDMVIK
Sbjct: 61  LADCAIGFGKRAIGGKNGRYYIVTDPSDNDVVNPKPGTLRHAVIQKEPLWIIFKRDMVIK 120

Query: 121 LKAELLMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQG----------- 180
           LKAELLMNSFKTIDGRGVSVHIAGGPCITIQ+VTNIIIHGINIHDCKQG           
Sbjct: 121 LKAELLMNSFKTIDGRGVSVHIAGGPCITIQFVTNIIIHGINIHDCKQGGNTYVRDSPEH 180

Query: 181 -----VEHDTVIRIL----------KTRTCKSPLLSTI---------------------- 240
                V     I I               C+  L+  I                      
Sbjct: 181 YGWRTVSDGDGISIFGGSHVWIDHCSLSNCRDGLIDAIHGSTAITVSNNYMTHHNKVMLL 240

Query: 241 --------------------FGEGLVQRMPR------------------------ASPTI 272
                               FGEGLVQRMPR                        ASPTI
Sbjct: 241 GHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWIMYAIGGSASPTI 300

[Close]

BLAST of Csor.00g083080 vs. ExPASy TrEMBL
Match: A0A1S3BB18 (Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103487738 PE=3 SV=1)

HSP 1 Score: 385 bits (988), Expect = 2.41e-130
Identity = 228/390 (58.46%), Postives = 241/390 (61.79%), Query Frame = 0


Query: 1   MCAISSS-PVADPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKN--- 60
           MC+ISSS PV DP+LV QEVL+SINNATTRRNLGFLSC TGNPIDDCWRCD NWEKN   
Sbjct: 26  MCSISSSSPVPDPDLVAQEVLTSINNATTRRNLGFLSCRTGNPIDDCWRCDANWEKNRKR 85

Query: 61  ----------------------LTDPSDKDSGEPKPGTLRHAVIQKNPYGSPFKRDMVIK 120
                                 +TDPSD D   PKPGTLRHAVIQK P    FKRDMVIK
Sbjct: 86  LANCAIGFGKRAIGGKNGRYYIVTDPSDNDVVNPKPGTLRHAVIQKEPLWIIFKRDMVIK 145

Query: 121 LKAELLMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQG----------- 180
           LKAELLMNSFKTIDGRGVSVHIAGGPCITIQ+VTNIIIHGINIHDCKQG           
Sbjct: 146 LKAELLMNSFKTIDGRGVSVHIAGGPCITIQFVTNIIIHGINIHDCKQGGNTYVRDSPEH 205

Query: 181 -----VEHDTVIRIL----------KTRTCKSPLLSTI---------------------- 240
                V     I I               C+  L+  I                      
Sbjct: 206 YGWRTVSDGDGISIFGGSHVWIDHCSLSNCRDGLIDAIHGSTAITVSNNYMTHHNKVMLL 265

Query: 241 --------------------FGEGLVQRMPR------------------------ASPTI 272
                               FGEGLVQRMPR                        ASPTI
Sbjct: 266 GHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWIMYAIGGSASPTI 325

[Close]

BLAST of Csor.00g083080 vs. ExPASy TrEMBL
Match: A0A6J1BR07 (Pectate lyase OS=Momordica charantia OX=3673 GN=LOC111004807 PE=3 SV=1)

HSP 1 Score: 376 bits (966), Expect = 4.01e-127
Identity = 224/389 (57.58%), Postives = 240/389 (61.70%), Query Frame = 0


Query: 1   MCAISSSPVADPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKN---- 60
           M +ISSSPVADPE +V+EVL+SINNA+ RR LGFLSCGTGNPIDDCWRCDPNWEKN    
Sbjct: 20  MSSISSSPVADPETIVEEVLTSINNAS-RRKLGFLSCGTGNPIDDCWRCDPNWEKNRKRL 79

Query: 61  ---------------------LTDPSDKDSGEPKPGTLRHAVIQKNPYGSPFKRDMVIKL 120
                                +TDPSDKD   PKPGTLRHAVIQK P    FKRDMVIKL
Sbjct: 80  ADCGIGFGKRAIGGKDGKFYVVTDPSDKDVVNPKPGTLRHAVIQKEPLWITFKRDMVIKL 139

Query: 121 KAELLMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQG------------ 180
           KAELLMNSFKTIDGRG SVHIAGGPCITIQ+VTNIIIHGINIHDCKQG            
Sbjct: 140 KAELLMNSFKTIDGRGASVHIAGGPCITIQFVTNIIIHGINIHDCKQGGNTYVRDSPDHY 199

Query: 181 -----VEHDTV---------IRILKTRTCKSPLLSTI----------------------- 240
                 + D V         I       C+  L+  I                       
Sbjct: 200 GWRTLSDGDGVSIFGGTHIWIDHCSLSNCRDGLIDAIHGSTAITISNNYMTHHNKVMLLG 259

Query: 241 -------------------FGEGLVQRMPR------------------------ASPTIN 272
                              FGEGLVQRMPR                        ASPTIN
Sbjct: 260 HSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWIMYAIGGSASPTIN 319

[Close]

BLAST of Csor.00g083080 vs. TAIR 10
Match: AT1G67750.1 (Pectate lyase family protein )

HSP 1 Score: 320.1 bits (819), Expect = 1.7e-87
Identity = 192/386 (49.74%), Postives = 218/386 (56.48%), Query Frame = 0


Query: 4   ISSSPVADPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKN------- 63
           I+S+PV++PELVVQEV   IN   +RRNLG LSCGTGNPIDDCWRCDP WEKN       
Sbjct: 25  IASTPVSEPELVVQEVNEKIN--ASRRNLGVLSCGTGNPIDDCWRCDPKWEKNRQRLADC 84

Query: 64  ------------------LTDPSDKDSGEPKPGTLRHAVIQKNPYGSPFKRDMVIKLKAE 123
                             +TD SDKD   PKPGTLRHAVIQ  P    F RDMVIKLK E
Sbjct: 85  AIGFGKHAIGGRDGKIYVVTDSSDKDVVNPKPGTLRHAVIQDEPLWIIFARDMVIKLKEE 144

Query: 124 LLMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQ---------------- 183
           L+MNSFKTIDGRG SVHIAGG CIT+QYVTNIIIHG+NIHDCK+                
Sbjct: 145 LIMNSFKTIDGRGASVHIAGGACITVQYVTNIIIHGVNIHDCKRKGNAYVRDSPSHYGWR 204

Query: 184 --------------------------------GVEHDTVIRI------------------ 243
                                            +   T I I                  
Sbjct: 205 TASDGDAVSIFGGSHVWVDHCSLSNCADGLIDAIHGSTAITISNNYLSHHNKVMLLGHSD 264

Query: 244 --LKTRTCKSPLLSTIFGEGLVQRMPR------------------------ASPTINSQG 273
              + +  +  +    FGEGLVQRMPR                        A+PTINSQG
Sbjct: 265 SYTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWQMYAIGGSAAPTINSQG 324

[Close]

BLAST of Csor.00g083080 vs. TAIR 10
Match: AT4G24780.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 306.2 bits (783), Expect = 2.6e-83
Identity = 183/385 (47.53%), Postives = 214/385 (55.58%), Query Frame = 0


Query: 6   SSPVADPELVVQEVLSSIN-NATTRRNLGFLSCGTGNPIDDCWRCDPNWEKN-------- 65
           SSPV DPE VV+EV  SIN +   RR LG+LSC TGNPIDDCWRCDP+WE++        
Sbjct: 24  SSPVPDPESVVEEVHKSINASVAGRRKLGYLSCTTGNPIDDCWRCDPHWEQHRQRLADCA 83

Query: 66  -----------------LTDPSDKDSGEPKPGTLRHAVIQKNPYGSPFKRDMVIKLKAEL 125
                            +TD  + +   PKPGTLRHAV+Q  P    F+RDM I+LK EL
Sbjct: 84  IGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEPLWIIFQRDMTIQLKEEL 143

Query: 126 LMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQG---------------- 185
           +MNSFKTIDGRG SVHI+GGPCITIQYVTNIIIHGI+IHDCKQG                
Sbjct: 144 IMNSFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCKQGGNAMVRSSPRHFGWRT 203

Query: 186 ----------------------------------------------VEHDTVIRI----- 245
                                                           HD V+ +     
Sbjct: 204 ISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSNNHMTHHDKVMLLGHSDT 263

Query: 246 -LKTRTCKSPLLSTIFGEGLVQRMPR------------------------ASPTINSQGN 273
             + +  +  +    FGEGLVQRMPR                        A+PTINSQGN
Sbjct: 264 YSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGN 323

[Close]

BLAST of Csor.00g083080 vs. TAIR 10
Match: AT4G24780.2 (Pectin lyase-like superfamily protein )

HSP 1 Score: 306.2 bits (783), Expect = 2.6e-83
Identity = 183/385 (47.53%), Postives = 214/385 (55.58%), Query Frame = 0


Query: 6   SSPVADPELVVQEVLSSIN-NATTRRNLGFLSCGTGNPIDDCWRCDPNWEKN-------- 65
           SSPV DPE VV+EV  SIN +   RR LG+LSC TGNPIDDCWRCDP+WE++        
Sbjct: 24  SSPVPDPESVVEEVHKSINASVAGRRKLGYLSCTTGNPIDDCWRCDPHWEQHRQRLADCA 83

Query: 66  -----------------LTDPSDKDSGEPKPGTLRHAVIQKNPYGSPFKRDMVIKLKAEL 125
                            +TD  + +   PKPGTLRHAV+Q  P    F+RDM I+LK EL
Sbjct: 84  IGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEPLWIIFQRDMTIQLKEEL 143

Query: 126 LMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQG---------------- 185
           +MNSFKTIDGRG SVHI+GGPCITIQYVTNIIIHGI+IHDCKQG                
Sbjct: 144 IMNSFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCKQGGNAMVRSSPRHFGWRT 203

Query: 186 ----------------------------------------------VEHDTVIRI----- 245
                                                           HD V+ +     
Sbjct: 204 ISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSNNHMTHHDKVMLLGHSDT 263

Query: 246 -LKTRTCKSPLLSTIFGEGLVQRMPR------------------------ASPTINSQGN 273
             + +  +  +    FGEGLVQRMPR                        A+PTINSQGN
Sbjct: 264 YSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGN 323

[Close]

BLAST of Csor.00g083080 vs. TAIR 10
Match: AT5G63180.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 300.1 bits (767), Expect = 1.9e-81
Identity = 183/387 (47.29%), Postives = 219/387 (56.59%), Query Frame = 0


Query: 5   SSSPVADPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKN-------- 64
           SS PV+DPELVV+EV   IN + +RR LGF SCG+GNPIDDCWRCD +WEKN        
Sbjct: 46  SSLPVSDPELVVEEVHRKINESISRRKLGFFSCGSGNPIDDCWRCDKDWEKNRKRLADCG 105

Query: 65  -----------------LTDPSDKDSGEPKPGTLRHAVIQKNPYGSPFKRDMVIKLKAEL 124
                            +TDP + D   P+PGTLR+AVIQ  P    FKRDM I+LK EL
Sbjct: 106 IGFGKNAIGGRDGEIYVVTDPGNDDPVNPRPGTLRYAVIQDEPLWIIFKRDMTIQLKEEL 165

Query: 125 LMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQG---------------- 184
           +MNSFKT+DGRG SVHI+GGPCITIQYVTNIIIHG++IHDCKQG                
Sbjct: 166 IMNSFKTLDGRGASVHISGGPCITIQYVTNIIIHGLHIHDCKQGGNTYVRDSPEHYGYRT 225

Query: 185 ----------------VEH-------DTVIRILKTRTC------------KSPLLS---- 244
                           V+H       D +I  ++  T             K  LL     
Sbjct: 226 VSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIRGSTAITISNNYLTHHNKVMLLGHSDT 285

Query: 245 ---------TI----FGEGLVQRMPR------------------------ASPTINSQGN 273
                    TI    FGEGLVQRMPR                        A+PTINSQGN
Sbjct: 286 YEQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGN 345

[Close]

BLAST of Csor.00g083080 vs. TAIR 10
Match: AT3G27400.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 282.7 bits (722), Expect = 3.1e-76
Identity = 170/381 (44.62%), Postives = 204/381 (53.54%), Query Frame = 0


Query: 9   VADPELVVQEVLSSINNATTRRNLGFLSCGTGNPIDDCWRCDPNWEKN------------ 68
           V DP LVV +V  S+ NA +RR+L +LSC TGNPIDDCWRCDPNWE N            
Sbjct: 33  VQDPNLVVDDVNRSVFNA-SRRSLAYLSCRTGNPIDDCWRCDPNWETNRQRLADCAIGFG 92

Query: 69  -------------LTDPSDKDSGEPKPGTLRHAVIQKNPYGSPFKRDMVIKLKAELLMNS 128
                        +TDP++ D   P+PGTLR+AV Q+ P    FKRDMVI+LK EL++ S
Sbjct: 93  KNAIGGRKGRIYVVTDPANDDPVNPRPGTLRYAVTQEEPLWIIFKRDMVIRLKKELIITS 152

Query: 129 FKTIDGRGVSVHIAGGPCITIQYVTNIIIHGINIHDCKQG-------------------- 188
           FKTIDGRG SVHI  GPC+ I Y TNIIIHGINIHDCK G                    
Sbjct: 153 FKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHDCKPGSGGMIKDGPHHTGWWMQSDG 212

Query: 189 ------------------------------------------VEHDTVIRI------LKT 248
                                                       HD V+ +       + 
Sbjct: 213 DAVAIFGGKHVWIDHCSLSNCDDGLIDAIHGSTAITISNNHMTHHDKVMLLGHSDSYTQD 272

Query: 249 RTCKSPLLSTIFGEGLVQRMPR------------------------ASPTINSQGNRYLA 273
           +  +  +    FGEGLVQRMPR                        ASPTI SQGNR+LA
Sbjct: 273 KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFLA 332

The following BLAST results are available for this feature:

BLAST of Csor.00g083080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FXD8	2.4e-86	49.74	Probable pectate lyase 5 OS=Arabidopsis thaliana OX=3702 GN=At1g67750 PE=2 SV=2	[more]
Q9C5M8	3.7e-82	47.53	Probable pectate lyase 18 OS=Arabidopsis thaliana OX=3702 GN=At4g24780 PE=2 SV=2	[more]
Q93Z25	2.6e-80	47.29	Probable pectate lyase 22 OS=Arabidopsis thaliana OX=3702 GN=At5g63180 PE=2 SV=1	[more]
O24554	2.1e-77	45.71	Pectate lyase OS=Zinnia violacea OX=34245 PE=1 SV=1	[more]
Q9LTZ0	4.3e-75	44.62	Putative pectate lyase 11 OS=Arabidopsis thaliana OX=3702 GN=At3g27400 PE=3 SV=2	[more]

BLAST of Csor.00g083080 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6598424.1	1.56e-195	100.00	putative pectate lyase 5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6598251.1	1.56e-144	63.75	putative pectate lyase 5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7029228.1	2.80e-144	63.75	putative pectate lyase 5 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023545498.1	7.99e-144	63.50	probable pectate lyase 5 [Cucurbita pepo subsp. pepo]	[more]
XP_022996659.1	7.99e-144	63.50	probable pectate lyase 5 [Cucurbita maxima]	[more]

BLAST of Csor.00g083080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K9C7	3.87e-144	63.50	Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111491836 PE=3 SV=1	[more]
A0A6J1HD44	3.87e-144	63.50	Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111462874 PE=3 SV=1	[more]
A0A5A7V5E9	1.05e-130	58.46	Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001810...	[more]
A0A1S3BB18	2.41e-130	58.46	Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103487738 PE=3 SV=1	[more]
A0A6J1BR07	4.01e-127	57.58	Pectate lyase OS=Momordica charantia OX=3673 GN=LOC111004807 PE=3 SV=1	[more]

BLAST of Csor.00g083080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67750.1	1.7e-87	49.74	Pectate lyase family protein	[more]
AT4G24780.1	2.6e-83	47.53	Pectin lyase-like superfamily protein	[more]
AT4G24780.2	2.6e-83	47.53	Pectin lyase-like superfamily protein	[more]
AT5G63180.1	1.9e-81	47.29	Pectin lyase-like superfamily protein	[more]
AT3G27400.1	3.1e-76	44.62	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018082	AmbAllergen	PRINTS	PR00807	AMBALLERGEN	coord: 62..87 score: 47.62 coord: 98..114 score: 66.67
IPR002022	Pectate lyase	SMART	SM00656	amb_all	coord: 90..195 e-value: 0.0049 score: -37.2
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 40..157 e-value: 2.9E-22 score: 81.1 coord: 170..265 e-value: 1.6E-14 score: 55.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..208
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..208
None	No IPR available	PANTHER	PTHR31683:SF138	PECTATE LYASE	coord: 57..142
None	No IPR available	PANTHER	PTHR31683:SF138	PECTATE LYASE	coord: 178..269 coord: 4..56
IPR045032	Pectin lyase family	PANTHER	PTHR31683	PECTATE LYASE 18-RELATED	coord: 57..142 coord: 178..269 coord: 4..56
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 68..272

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g083080.m01	Csor.00g083080.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0030570	pectate lyase activity