Csor.00g082910 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g082910
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	scarecrow-like protein 8
Location	Csor_Chr18: 7244429 .. 7245094 (-)
RNA-Seq Expression	Csor.00g082910
Synteny	Csor.00g082910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGATGAATCATCGCCTTCAGGAGTTGGAGAAAGAGCTTCTTGAAGATAAGACGACGATGATGGAAGTGATGTTGCGTCTGTGATTACGAGTTTGACTATGGTGTGAGAAGATGTATAATCTAATTAGTCTGACGGCGTTGCTGAATTAGAAGCCGGTTTTGACTTCGCCAACTACCTCTACTTCATCTTCTTGTTCTTCGTCTACGTCGTCTTCAGTAGCTTCTACATCTTCTGATACTTGGAAACAATCTGTAATCGAGGCTGCAGCGGCGATTTCTGAGGGAAAATTGGAGGTTATGGATGAGATTCTTGCATGGGTGGTTAAGATTTCGAATGCGAGAGGTAGTTCTGTGCAGAGATTCGCAGAGTATATGGTTTTTGTTCTGAAATTGCAAGTAAATCCAATGGAATTTCCGCATCTTGTGGCAGAGATTTTCGGTGACAATCCTTAGCGGTGACTCAGTCGCTTTAAGATGTTTCTCCTTACTTTAAGCTTGCTTTCATTGCAGCAAAATCTCGCAATTCTTGAGGGAATAGAGGAAGAGGATCGGAAATTGCATGTTGTGGATTTTGATATCAGGAAGGGAGGTCAGTATATGAATCTAATCCACCTTCTCTCAGGTCGTTATGAAATTAATTGTGATTGTAGCGGAGAATGGTAG

mRNA sequence

ATGATGATGAATCATCGCCTTCAGGAGTTGGAGAAAGAGCTTCTTGAAGATAAGACGACGATGATGGAAAAGCCGGTTTTGACTTCGCCAACTACCTCTACTTCATCTTCTTGTTCTTCGTCTACGTCGTCTTCAGTAGCTTCTACATCTTCTGATACTTGGAAACAATCTGTAATCGAGGCTGCAGCGGCGATTTCTGAGGGAAAATTGGAGGTTATGGATGAGATTCTTGCATGGGTGGTTAAGATTTCGAATGCGAGAGGTAGTTCTGTGCAGAGATTCGCAGAGTATATGGTTTTTGTTCTGAAATTGCAACAAAATCTCGCAATTCTTGAGGGAATAGAGGAAGAGGATCGGAAATTGCATGTTGTGGATTTTGATATCAGGAAGGGAGGTCAGTATATGAATCTAATCCACCTTCTCTCAGGTCGTTATGAAATTAATTGTGATTGTAGCGGAGAATGGTAG

Coding sequence (CDS)

ATGATGATGAATCATCGCCTTCAGGAGTTGGAGAAAGAGCTTCTTGAAGATAAGACGACGATGATGGAAAAGCCGGTTTTGACTTCGCCAACTACCTCTACTTCATCTTCTTGTTCTTCGTCTACGTCGTCTTCAGTAGCTTCTACATCTTCTGATACTTGGAAACAATCTGTAATCGAGGCTGCAGCGGCGATTTCTGAGGGAAAATTGGAGGTTATGGATGAGATTCTTGCATGGGTGGTTAAGATTTCGAATGCGAGAGGTAGTTCTGTGCAGAGATTCGCAGAGTATATGGTTTTTGTTCTGAAATTGCAACAAAATCTCGCAATTCTTGAGGGAATAGAGGAAGAGGATCGGAAATTGCATGTTGTGGATTTTGATATCAGGAAGGGAGGTCAGTATATGAATCTAATCCACCTTCTCTCAGGTCGTTATGAAATTAATTGTGATTGTAGCGGAGAATGGTAG

Protein sequence

MMMNHRLQELEKELLEDKTTMMEKPVLTSPTTSTSSSCSSSTSSSVASTSSDTWKQSVIEAAAAISEGKLEVMDEILAWVVKISNARGSSVQRFAEYMVFVLKLQQNLAILEGIEEEDRKLHVVDFDIRKGGQYMNLIHLLSGRYEINCDCSGEW

Homology

[Close]

BLAST of Csor.00g082910 vs. ExPASy Swiss-Prot
Match: Q9FYR7 (Scarecrow-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=SCL8 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 8.9e-09
Identity = 62/200 (31.00%), Postives = 96/200 (48.00%), Query Frame = 0


Query: 3   MNHRLQELEKELLED----------------KTTMMEKPVLTSP------TTSTSSSCSS 62
           M + L+ELEK+LL+D                 +  ++  V  +P      + S SSS SS
Sbjct: 192 MLNSLRELEKQLLDDDDESGGDDDVSVITNSNSDWIQNLVTPNPNPNPVLSFSPSSSSSS 251

Query: 63  STSSSVASTSSDTWKQSVIEAAAAISEGKLEVMDEILAWVVKISNARGSSVQRFAEYMVF 122
           S+ S+ ++T+S   +Q+V+E A AI+EGK E+  EILA V +  N   +S ++  ++MV 
Sbjct: 252 SSPSTASTTTSVCSRQTVMEIATAIAEGKTEIATEILARVSQTPNLERNSEEKLVDFMVA 311

Query: 123 VLKLQ---------------------------------QNLAILEGIEEEDRKL---HVV 145
            L+ +                                  NLAIL+  +  D  +   HV+
Sbjct: 312 ALRSRIASPVTELYGKEHLISTQLLYELSPCFKLGFEAANLAILDAADNNDGGMMIPHVI 371

[Close]

BLAST of Csor.00g082910 vs. NCBI nr
Match: KAG6573556.1 (Scarecrow-like protein 8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 290 bits (743), Expect = 1.22e-98
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MMMNHRLQELEKELLEDKTTMMEKPVLTSPTTSTSSSCSSSTSSSVASTSSDTWKQSVIE 60
           MMMNHRLQELEKELLEDKTTMMEKPVLTSPTTSTSSSCSSSTSSSVASTSSDTWKQSVIE
Sbjct: 1   MMMNHRLQELEKELLEDKTTMMEKPVLTSPTTSTSSSCSSSTSSSVASTSSDTWKQSVIE 60

Query: 61  AAAAISEGKLEVMDEILAWVVKISNARGSSVQRFAEYMVFVLKLQQNLAILEGIEEEDRK 120
           AAAAISEGKLEVMDEILAWVVKISNARGSSVQRFAEYMVFVLKLQQNLAILEGIEEEDRK
Sbjct: 61  AAAAISEGKLEVMDEILAWVVKISNARGSSVQRFAEYMVFVLKLQQNLAILEGIEEEDRK 120

Query: 121 LHVVDFDIRKGGQYMNLIHLLSGRYEINCDCSGEW 155
           LHVVDFDIRKGGQYMNLIHLLSGRYEINCDCSGEW
Sbjct: 121 LHVVDFDIRKGGQYMNLIHLLSGRYEINCDCSGEW 155

[Close]

BLAST of Csor.00g082910 vs. NCBI nr
Match: KAG6605737.1 (Scarecrow-like protein 8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 184 bits (466), Expect = 9.98e-52
Identity = 125/214 (58.41%), Postives = 132/214 (61.68%), Query Frame = 0


Query: 1   MMMNHRLQELEKELLEDKT--------------------TMM----------EKPVLTSP 60
           MMMNHRLQELEK+LLED                      TM           +KPV TSP
Sbjct: 153 MMMNHRLQELEKQLLEDNDDDDGSDAASVITSSTSAWCETMYNLISPTAPPNQKPVSTSP 212

Query: 61  TTSTSSSCSSSTSSSVASTSSDTWKQSVIEAAAAISEGKLEVMDEILAWVVKISNARGSS 120
           TTS SSSCSSSTSSSVAS SSD+WKQSVIEAAAAISEGKL+V+DEILA VVKISNARGSS
Sbjct: 213 TTSASSSCSSSTSSSVASPSSDSWKQSVIEAAAAISEGKLDVVDEILAPVVKISNARGSS 272

Query: 121 VQRFAEYMVFVLK--------------------------------------LQQNLAILE 146
           VQR AEYMVF LK                                      +  NLAILE
Sbjct: 273 VQRLAEYMVFALKSRVNPAEFPPPVAEIFGDEHSAATQSLYDVSPCFKLAFMAANLAILE 332

[Close]

BLAST of Csor.00g082910 vs. NCBI nr
Match: KAG7035643.1 (Scarecrow-like protein 8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 184 bits (466), Expect = 9.98e-52
Identity = 125/214 (58.41%), Postives = 132/214 (61.68%), Query Frame = 0


Query: 1   MMMNHRLQELEKELLEDKT--------------------TMM----------EKPVLTSP 60
           MMMNHRLQELEK+LLED                      TM           +KPV TSP
Sbjct: 153 MMMNHRLQELEKQLLEDNDDDDGSDAASVITSSTSAWCETMYNLISPTAPPNQKPVSTSP 212

Query: 61  TTSTSSSCSSSTSSSVASTSSDTWKQSVIEAAAAISEGKLEVMDEILAWVVKISNARGSS 120
           TTS SSSCSSSTSSSVAS SSD+WKQSVIEAAAAISEGKL+V+DEILA VVKISNARGSS
Sbjct: 213 TTSASSSCSSSTSSSVASPSSDSWKQSVIEAAAAISEGKLDVVDEILAPVVKISNARGSS 272

Query: 121 VQRFAEYMVFVLK--------------------------------------LQQNLAILE 146
           VQR AEYMVF LK                                      +  NLAILE
Sbjct: 273 VQRLAEYMVFALKSRVNPAEFPPPVAEIFGDEHSAATQSLYDVSPCFKLAFMAANLAILE 332

[Close]

BLAST of Csor.00g082910 vs. NCBI nr
Match: XP_023534055.1 (scarecrow-like protein 8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 182 bits (463), Expect = 2.72e-51
Identity = 124/214 (57.94%), Postives = 132/214 (61.68%), Query Frame = 0


Query: 1   MMMNHRLQELEKELLEDKT--------------------TMM----------EKPVLTSP 60
           MMMNHRLQELEK+LLED                      TM           +KPV TSP
Sbjct: 153 MMMNHRLQELEKQLLEDNDDDDGSDAASVITSSTSAWCETMYNLISPTAPPNQKPVSTSP 212

Query: 61  TTSTSSSCSSSTSSSVASTSSDTWKQSVIEAAAAISEGKLEVMDEILAWVVKISNARGSS 120
           TTS SSSCSSSTSSSVAS SSD+WKQSVIEAAAAISEGKL+V+DEIL+ VVKISNARGSS
Sbjct: 213 TTSASSSCSSSTSSSVASPSSDSWKQSVIEAAAAISEGKLDVVDEILSPVVKISNARGSS 272

Query: 121 VQRFAEYMVFVLK--------------------------------------LQQNLAILE 146
           VQR AEYMVF LK                                      +  NLAILE
Sbjct: 273 VQRLAEYMVFALKSRVNPAEFPPPVAEIFGDEHSAATQSLYDVSPCFKLAFMAANLAILE 332

[Close]

BLAST of Csor.00g082910 vs. NCBI nr
Match: XP_022995259.1 (scarecrow-like protein 8 [Cucurbita maxima])

HSP 1 Score: 182 bits (462), Expect = 3.80e-51
Identity = 124/214 (57.94%), Postives = 131/214 (61.21%), Query Frame = 0


Query: 1   MMMNHRLQELEKELLEDKT--------------------TMM----------EKPVLTSP 60
           MMMNHRLQELEK+LLED                      TM           +KPV TSP
Sbjct: 153 MMMNHRLQELEKQLLEDNDDDDGSDAASVITSSTSAWCETMYNLISPTAPPNQKPVSTSP 212

Query: 61  TTSTSSSCSSSTSSSVASTSSDTWKQSVIEAAAAISEGKLEVMDEILAWVVKISNARGSS 120
           TTS SSSCSSSTSSSVAS SSD+WKQSVIEAAAAISEGKL+V+DEILA VVK SNARGSS
Sbjct: 213 TTSASSSCSSSTSSSVASPSSDSWKQSVIEAAAAISEGKLDVVDEILAPVVKFSNARGSS 272

Query: 121 VQRFAEYMVFVLK--------------------------------------LQQNLAILE 146
           VQR AEYMVF LK                                      +  NLAILE
Sbjct: 273 VQRLAEYMVFALKSRVNPAEFPPPVAEIFGDEHSAATQSLYDVSPCFKLAFMAANLAILE 332

[Close]

BLAST of Csor.00g082910 vs. ExPASy TrEMBL
Match: A0A6J1K574 (scarecrow-like protein 8 OS=Cucurbita maxima OX=3661 GN=LOC111490861 PE=3 SV=1)

HSP 1 Score: 182 bits (462), Expect = 1.84e-51
Identity = 124/214 (57.94%), Postives = 131/214 (61.21%), Query Frame = 0


Query: 1   MMMNHRLQELEKELLEDKT--------------------TMM----------EKPVLTSP 60
           MMMNHRLQELEK+LLED                      TM           +KPV TSP
Sbjct: 153 MMMNHRLQELEKQLLEDNDDDDGSDAASVITSSTSAWCETMYNLISPTAPPNQKPVSTSP 212

Query: 61  TTSTSSSCSSSTSSSVASTSSDTWKQSVIEAAAAISEGKLEVMDEILAWVVKISNARGSS 120
           TTS SSSCSSSTSSSVAS SSD+WKQSVIEAAAAISEGKL+V+DEILA VVK SNARGSS
Sbjct: 213 TTSASSSCSSSTSSSVASPSSDSWKQSVIEAAAAISEGKLDVVDEILAPVVKFSNARGSS 272

Query: 121 VQRFAEYMVFVLK--------------------------------------LQQNLAILE 146
           VQR AEYMVF LK                                      +  NLAILE
Sbjct: 273 VQRLAEYMVFALKSRVNPAEFPPPVAEIFGDEHSAATQSLYDVSPCFKLAFMAANLAILE 332

[Close]

BLAST of Csor.00g082910 vs. ExPASy TrEMBL
Match: A0A6J1H2B4 (scarecrow-like protein 8 OS=Cucurbita moschata OX=3662 GN=LOC111459386 PE=3 SV=1)

HSP 1 Score: 182 bits (461), Expect = 2.57e-51
Identity = 123/213 (57.75%), Postives = 131/213 (61.50%), Query Frame = 0


Query: 2   MMNHRLQELEKELLEDKT--------------------TMM----------EKPVLTSPT 61
           MMNHRLQELEK+LLED                      TM           +KPV TSPT
Sbjct: 154 MMNHRLQELEKQLLEDNDDDDGSDAASVITSSTSAWCETMYNLISPTAPPNQKPVSTSPT 213

Query: 62  TSTSSSCSSSTSSSVASTSSDTWKQSVIEAAAAISEGKLEVMDEILAWVVKISNARGSSV 121
           TS SSSCSSSTSSSVAS SSD+WKQSVIEAAAAISEGKL+V+DEILA VVKISNARGSSV
Sbjct: 214 TSASSSCSSSTSSSVASPSSDSWKQSVIEAAAAISEGKLDVVDEILAPVVKISNARGSSV 273

Query: 122 QRFAEYMVFVLK--------------------------------------LQQNLAILEG 146
           QR AEYMVF LK                                      +  NLAILE 
Sbjct: 274 QRLAEYMVFALKSRVNPAEFPPPVAEIFGDEHSAATQSLYDVSPCFKLAFMAANLAILEA 333

[Close]

BLAST of Csor.00g082910 vs. ExPASy TrEMBL
Match: A0A5A7TML4 (Scarecrow-like protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00990 PE=3 SV=1)

HSP 1 Score: 163 bits (413), Expect = 2.03e-44
Identity = 115/211 (54.50%), Postives = 123/211 (58.29%), Query Frame = 0


Query: 2   MMNHRLQELEKELLEDK------------------------TTMMEKPVLT----SPTTS 61
           MMNHRLQELEKELLED                           +   P  T    SPT+S
Sbjct: 152 MMNHRLQELEKELLEDNDDDDGSDAVSVITSSNSAWCETIYNLISPNPSPTAQNPSPTSS 211

Query: 62  TSSSCSSSTSSSVASTSSDTWKQSVIEAAAAISEGKLEVMDEILAWVVKISNARGSSVQR 121
            SSSCSSSTSSSVAS +SD+WKQSVIEAA AISEGKLE +DEILA VVKISNARG+SVQR
Sbjct: 212 ASSSCSSSTSSSVASPASDSWKQSVIEAATAISEGKLEGLDEILAPVVKISNARGNSVQR 271

Query: 122 FAEYMVFVLK--------------------------------------LQQNLAILEGIE 146
            AEYMV  LK                                      +  NLAILE I 
Sbjct: 272 LAEYMVLALKSRVNPVEFPPPVVEIYGDEHSAATQLLYDVSPCFKLAFMAANLAILEAIG 331

[Close]

BLAST of Csor.00g082910 vs. ExPASy TrEMBL
Match: A0A1S3AUC8 (scarecrow-like protein 8 OS=Cucumis melo OX=3656 GN=LOC103482912 PE=3 SV=1)

HSP 1 Score: 163 bits (413), Expect = 2.03e-44
Identity = 115/211 (54.50%), Postives = 123/211 (58.29%), Query Frame = 0


Query: 2   MMNHRLQELEKELLEDK------------------------TTMMEKPVLT----SPTTS 61
           MMNHRLQELEKELLED                           +   P  T    SPT+S
Sbjct: 152 MMNHRLQELEKELLEDNDDDDGSDAVSVITSSNSAWCETIYNLISPNPSPTAQNPSPTSS 211

Query: 62  TSSSCSSSTSSSVASTSSDTWKQSVIEAAAAISEGKLEVMDEILAWVVKISNARGSSVQR 121
            SSSCSSSTSSSVAS +SD+WKQSVIEAA AISEGKLE +DEILA VVKISNARG+SVQR
Sbjct: 212 ASSSCSSSTSSSVASPASDSWKQSVIEAATAISEGKLEGLDEILAPVVKISNARGNSVQR 271

Query: 122 FAEYMVFVLK--------------------------------------LQQNLAILEGIE 146
            AEYMV  LK                                      +  NLAILE I 
Sbjct: 272 LAEYMVLALKSRVNPVEFPPPVVEIYGDEHSAATQLLYDVSPCFKLAFMAANLAILEAIG 331

[Close]

BLAST of Csor.00g082910 vs. ExPASy TrEMBL
Match: A0A0A0KK19 (GRAS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G140530 PE=3 SV=1)

HSP 1 Score: 162 bits (410), Expect = 5.47e-44
Identity = 114/211 (54.03%), Postives = 123/211 (58.29%), Query Frame = 0


Query: 2   MMNHRLQELEKELLEDK------------------------TTMMEKPVLT----SPTTS 61
           MMNHRLQELEKELLED                           +   P  T    SPT+S
Sbjct: 152 MMNHRLQELEKELLEDNDDDDGSDAVSVITSSNSAWCETIYNLISPNPSPTAQNPSPTSS 211

Query: 62  TSSSCSSSTSSSVASTSSDTWKQSVIEAAAAISEGKLEVMDEILAWVVKISNARGSSVQR 121
            SSSCSSSTSSSVAS +SD+WKQSVIEAA AIS+GKLE +DEILA VVKISNARG+SVQR
Sbjct: 212 ASSSCSSSTSSSVASPASDSWKQSVIEAATAISDGKLEGLDEILAPVVKISNARGNSVQR 271

Query: 122 FAEYMVFVLK--------------------------------------LQQNLAILEGIE 146
            AEYMV  LK                                      +  NLAILE I 
Sbjct: 272 LAEYMVLALKSRVNPVEFPPPVVEIYGDEHSAATQLLYDVSPCFKLAFMAANLAILEAIG 331

[Close]

BLAST of Csor.00g082910 vs. TAIR 10
Match: AT5G52510.1 (SCARECROW-like 8 )

HSP 1 Score: 61.6 bits (148), Expect = 6.3e-10
Identity = 62/200 (31.00%), Postives = 96/200 (48.00%), Query Frame = 0


Query: 3   MNHRLQELEKELLED----------------KTTMMEKPVLTSP------TTSTSSSCSS 62
           M + L+ELEK+LL+D                 +  ++  V  +P      + S SSS SS
Sbjct: 192 MLNSLRELEKQLLDDDDESGGDDDVSVITNSNSDWIQNLVTPNPNPNPVLSFSPSSSSSS 251

Query: 63  STSSSVASTSSDTWKQSVIEAAAAISEGKLEVMDEILAWVVKISNARGSSVQRFAEYMVF 122
           S+ S+ ++T+S   +Q+V+E A AI+EGK E+  EILA V +  N   +S ++  ++MV 
Sbjct: 252 SSPSTASTTTSVCSRQTVMEIATAIAEGKTEIATEILARVSQTPNLERNSEEKLVDFMVA 311

Query: 123 VLKLQ---------------------------------QNLAILEGIEEEDRKL---HVV 145
            L+ +                                  NLAIL+  +  D  +   HV+
Sbjct: 312 ALRSRIASPVTELYGKEHLISTQLLYELSPCFKLGFEAANLAILDAADNNDGGMMIPHVI 371

[Close]

BLAST of Csor.00g082910 vs. TAIR 10
Match: AT1G21450.1 (SCARECROW-like 1 )

HSP 1 Score: 41.6 bits (96), Expect = 6.8e-04
Identity = 57/199 (28.64%), Postives = 83/199 (41.71%), Query Frame = 0


Query: 3   MNHRLQELEKELLEDKTTMM-----------------EKPVLTSPTTSTSSSCSSSTSSS 62
           M  ++QELE+ LL D+   M                 E          +SS+ S+S  SS
Sbjct: 154 MRSKIQELERALLGDEDDKMVGIDNLMEIDSEWSYQNESEQHQDSPKESSSADSNSHVSS 213

Query: 63  VASTSSDTWKQSVIEAAAAISEGKLEVMDEILAWVVKISNARGSSVQRFAEYMV------ 122
               S  T KQ +I  A A+SEGKLE    ++  + +I + +G   QR A YMV      
Sbjct: 214 KEVVSQATPKQILISCARALSEGKLEEALSMVNELRQIVSIQGDPSQRIAAYMVEGLAAR 273

Query: 123 ------FVLK------------------------------LQQNLAILEGIEEEDRKLHV 143
                 F+ +                              L  N AILE I+ E+ ++H+
Sbjct: 274 MAASGKFIYRALKCKEPPSDERLAAMQVLFEVCPCFKFGFLAANGAILEAIKGEE-EVHI 333

The following BLAST results are available for this feature:

BLAST of Csor.00g082910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYR7	8.9e-09	31.00	Scarecrow-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=SCL8 PE=2 SV=1	[more]

BLAST of Csor.00g082910 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6573556.1	1.22e-98	100.00	Scarecrow-like protein 8, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6605737.1	9.98e-52	58.41	Scarecrow-like protein 8, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7035643.1	9.98e-52	58.41	Scarecrow-like protein 8, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023534055.1	2.72e-51	57.94	scarecrow-like protein 8 [Cucurbita pepo subsp. pepo]	[more]
XP_022995259.1	3.80e-51	57.94	scarecrow-like protein 8 [Cucurbita maxima]	[more]

BLAST of Csor.00g082910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K574	1.84e-51	57.94	scarecrow-like protein 8 OS=Cucurbita maxima OX=3661 GN=LOC111490861 PE=3 SV=1	[more]
A0A6J1H2B4	2.57e-51	57.75	scarecrow-like protein 8 OS=Cucurbita moschata OX=3662 GN=LOC111459386 PE=3 SV=1	[more]
A0A5A7TML4	2.03e-44	54.50	Scarecrow-like protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3AUC8	2.03e-44	54.50	scarecrow-like protein 8 OS=Cucumis melo OX=3656 GN=LOC103482912 PE=3 SV=1	[more]
A0A0A0KK19	5.47e-44	54.03	GRAS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G140530 PE=3 S...	[more]

BLAST of Csor.00g082910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52510.1	6.3e-10	31.00	SCARECROW-like 8	[more]
AT1G21450.1	6.8e-04	28.64	SCARECROW-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005202	Transcription factor GRAS	PFAM	PF03514	GRAS	coord: 104..145 e-value: 5.5E-9 score: 35.5
IPR005202	Transcription factor GRAS	PANTHER	PTHR31636	OSJNBA0084A10.13 PROTEIN-RELATED	coord: 27..103 coord: 107..146
IPR005202	Transcription factor GRAS	PROSITE	PS50985	GRAS	coord: 45..155 score: 16.665085
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..48
IPR030013	Scarecrow-like protein 8	PANTHER	PTHR31636:SF221	SCARECROW-LIKE PROTEIN 8	coord: 107..146
IPR030013	Scarecrow-like protein 8	PANTHER	PTHR31636:SF221	SCARECROW-LIKE PROTEIN 8	coord: 27..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g082910.m01	Csor.00g082910.m01	mRNA