Csor.00g081990 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACATCTCACTTGTCTTGTGGTTCATTAGCATGTGCAACTGGAAGTACTAACATGAATAGTCAGTCAAGGTATAGATTTGATGAAATTCATATTTTAGTTTGTCTTCTCTTTTTTTTGTATCGAATGTCTGAATGATATGTTTGTAATTAAATCTTTTATCTGTTTTCAAGGAGTTCATATCAACAAGGGCGTTTTGGCTTTTAACAACGTCATAAGTGCATTGGGAGTTGAGAATAATCGAAGAGAAAGATGCCATGTTATCTACCATGACAGCAAGTTAACACGTTCGTTACAGACATGCCATGTTATTCTCTGTTCAAAATATACATCACCCTCAATTATCGTCATACATATATATATATATACACACATATTTAGCTTTTATCTTGTTTTTGTTTTTGTAGAAAGAGATGGAGGAACTTAGACGTAAGCTTTCGAACATATTGTCTACATCTGATGACGGGGTGCAAAAGTTGAAGCAAGAATATCGCAGTCTCATATTTTGGATATTTTATAATTTAGGTCTCAGGACGAGGCAGAGGTCGGAGCTGTTGTTGCAGAGGAAGGTCTAGGGGTAGAGGTATGACTTTGATTATTTTATGGCGGGTGGTAGTTCAGTTAGTTTCTTGCTTTAAGTAGAGCACGTATGGCCCGTAACAATTTGTTTTTATTTTATAATGATATTGGTTTTAGGACTTCTAGTTAATGGCTATGTGGGTAACAAGTTTTTTGTATTTACTCTTCATTATTAACTCAATGCCAAACTTAATAATGAAAATTTAAATATATCCGTTTTTCTTTATTTTCACTTTTTATACCTCATCAACCGTTTTGGCCTTGATTTGACAATTTTCTTAAATAAAAATTGCAGAACTCAGCTTTGAAGGAGTATGCATAAGTATGCAGAAATATGAAAAAGTATGTAGAAGTATACAGAAATATGCAGAAGTATACAGAGGTATGCAAAATTATATAATAGTATGAAGAAGTATGCAGAAATATTTAGAGGTACGAAGAAATACATTTTATCCCTCTTAAACAGTTTTGACATACATTTAAAACTTTCCTTAAATGAAAATTGCCGAACTCAGCTTTGAAGAAGTATACAGAAATATGAAGAAGTATGCAGAGGTATGCAGGAAGTATTTAGAGATATGAAAAAGTATGCAAAAATATGAAAAAGTATGCAGGATATAAAAATGACAGAATTTAGTTTGCATATGTATGCAAAAATATACAAAAGTATCTAAGATATGAAAATTGCATAACTCGGCAGCTTCTATTTCTCTCTGTTTAGTGTAAACCCGAATCTTCCATTTCCCTCTGTTTCTTTAGACGTTGAGAATATCAGTTGAATCTTGGCTTCCGGAGTTGACTTTGATTTTACATCGGAAGTGTATTATGTTAAAATTCTTCGCAATGCATACGCGTTGCTGTGAACATTAATTAGACCTTTGATTACACCCGAGCTAATCGATGGGTGTATGGATTATATTACCGTTGTGCCTGGCGAACCTCAGGTGTTGATTACGTTGGGTTTTGAATGTTTATATTTCGTTTCATTTGTTTGCAATTTTCAGTTGTTGAATTTTTTTGTTTGTGTTTAATGGAATGATTCAATTTTGCAGGTTCATATTGGGTCACACGTACTCAGATACGATAATGTGTATGGTAGCTTTGGATCGCCATCTTATGCATTATATGACGACTGCATTGCCCCATTAGTGGATGCATTATTTGAGGCTATAACATTACTGTTATTGCTTATGGATGGACGAACATTTATGTTGTCTCAGAGCTGTGTTTCTTAA ATGACATCTCACTTGTCTTGTGGTTCATTAGCATGTGCAACTGGAAGTACTAACATGAATAGTCAGTCAAGGTCTCAGGACGAGGCAGAGGTCGGAGCTGTTGTTGCAGAGGAAGGTCTAGGGGTAGAGGTTCATATTGGGTCACACGTACTCAGATACGATAATGTGTATGGTAGCTTTGGATCGCCATCTTATGCATTATATGACGACTGCATTGCCCCATTAGTGGATGCATTATTTGAGGCTATAACATTACTGTTATTGCTTATGGATGGACGAACATTTATGTTGTCTCAGAGCTGTGTTTCTTAA ATGACATCTCACTTGTCTTGTGGTTCATTAGCATGTGCAACTGGAAGTACTAACATGAATAGTCAGTCAAGGTCTCAGGACGAGGCAGAGGTCGGAGCTGTTGTTGCAGAGGAAGGTCTAGGGGTAGAGGTTCATATTGGGTCACACGTACTCAGATACGATAATGTGTATGGTAGCTTTGGATCGCCATCTTATGCATTATATGACGACTGCATTGCCCCATTAGTGGATGCATTATTTGAGGCTATAACATTACTGTTATTGCTTATGGATGGACGAACATTTATGTTGTCTCAGAGCTGTGTTTCTTAA MTSHLSCGSLACATGSTNMNSQSRSQDEAEVGAVVAEEGLGVEVHIGSHVLRYDNVYGSFGSPSYALYDDCIAPLVDALFEAITLLLLLMDGRTFMLSQSCVS Homology
BLAST of Csor.00g081990 vs. ExPASy Swiss-Prot
Match: Q6YUL8 (Kinesin-like protein KIN-4A OS=Oryza sativa subsp. japonica OX=39947 GN=KIN4A PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 6.6e-08 Identity = 26/63 (41.27%), Postives = 41/63 (65.08%), Query Frame = 0
BLAST of Csor.00g081990 vs. ExPASy Swiss-Prot
Match: Q8GS71 (Kinesin-like protein KIN-4A OS=Arabidopsis thaliana OX=3702 GN=KIN4A PE=1 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 1.5e-07 Identity = 27/63 (42.86%), Postives = 38/63 (60.32%), Query Frame = 0
BLAST of Csor.00g081990 vs. ExPASy Swiss-Prot
Match: F4K0J3 (Kinesin-like protein KIN-4C OS=Arabidopsis thaliana OX=3702 GN=KIN4C PE=2 SV=2) HSP 1 Score: 53.5 bits (127), Expect = 1.6e-06 Identity = 24/46 (52.17%), Postives = 31/46 (67.39%), Query Frame = 0
BLAST of Csor.00g081990 vs. ExPASy Swiss-Prot
Match: B9F2Y7 (Kinesin-like protein KIN-4C OS=Oryza sativa subsp. japonica OX=39947 GN=KIN4C PE=2 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 1.0e-05 Identity = 21/46 (45.65%), Postives = 31/46 (67.39%), Query Frame = 0
BLAST of Csor.00g081990 vs. ExPASy Swiss-Prot
Match: Q94LW7 (Kinesin-like protein KIN-4B OS=Arabidopsis thaliana OX=3702 GN=KIN4B PE=2 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.2e-04 Identity = 32/101 (31.68%), Postives = 53/101 (52.48%), Query Frame = 0
BLAST of Csor.00g081990 vs. NCBI nr
Match: KAG6591256.1 (Kinesin-like protein KIN-4A, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 202 bits (515), Expect = 1.53e-65 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of Csor.00g081990 vs. NCBI nr
Match: QWT43299.1 (kinesin-related protein KIN4A [Citrullus lanatus subsp. vulgaris]) HSP 1 Score: 73.6 bits (179), Expect = 1.43e-12 Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = 0
BLAST of Csor.00g081990 vs. NCBI nr
Match: XP_022981763.1 (kinesin-like protein KIN-4C isoform X2 [Cucurbita maxima]) HSP 1 Score: 73.6 bits (179), Expect = 1.43e-12 Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = 0
BLAST of Csor.00g081990 vs. NCBI nr
Match: XP_022981762.1 (kinesin-like protein KIN-4C isoform X1 [Cucurbita maxima] >XP_022981764.1 kinesin-like protein KIN-4C isoform X1 [Cucurbita maxima]) HSP 1 Score: 73.6 bits (179), Expect = 1.43e-12 Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = 0
BLAST of Csor.00g081990 vs. NCBI nr
Match: XP_022137643.1 (LOW QUALITY PROTEIN: kinesin-like protein KIN-4C [Momordica charantia]) HSP 1 Score: 73.6 bits (179), Expect = 1.43e-12 Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = 0
BLAST of Csor.00g081990 vs. ExPASy TrEMBL
Match: A0A6J1J2Z7 (kinesin-like protein KIN-4C isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480816 PE=3 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 6.93e-13 Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = 0
BLAST of Csor.00g081990 vs. ExPASy TrEMBL
Match: A0A6J1J2S0 (kinesin-like protein KIN-4C isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480816 PE=3 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 6.93e-13 Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = 0
BLAST of Csor.00g081990 vs. ExPASy TrEMBL
Match: A0A6J1CAW4 (LOW QUALITY PROTEIN: kinesin-like protein KIN-4C OS=Momordica charantia OX=3673 GN=LOC111009034 PE=3 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 6.93e-13 Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = 0
BLAST of Csor.00g081990 vs. ExPASy TrEMBL
Match: A0A1S3CQK5 (kinesin-like protein KIN-4C OS=Cucumis melo OX=3656 GN=LOC103503659 PE=3 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 3.29e-12 Identity = 30/39 (76.92%), Postives = 35/39 (89.74%), Query Frame = 0
BLAST of Csor.00g081990 vs. ExPASy TrEMBL
Match: A0A6J1FKW6 (kinesin-like protein KIN-4C isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446675 PE=3 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 3.29e-12 Identity = 31/39 (79.49%), Postives = 34/39 (87.18%), Query Frame = 0
BLAST of Csor.00g081990 vs. TAIR 10
Match: AT5G47820.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 57.0 bits (136), Expect = 1.0e-08 Identity = 27/63 (42.86%), Postives = 38/63 (60.32%), Query Frame = 0
BLAST of Csor.00g081990 vs. TAIR 10
Match: AT5G47820.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 57.0 bits (136), Expect = 1.0e-08 Identity = 27/63 (42.86%), Postives = 38/63 (60.32%), Query Frame = 0
BLAST of Csor.00g081990 vs. TAIR 10
Match: AT5G60930.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 53.5 bits (127), Expect = 1.1e-07 Identity = 24/46 (52.17%), Postives = 31/46 (67.39%), Query Frame = 0
BLAST of Csor.00g081990 vs. TAIR 10
Match: AT3G50240.1 (ATP binding microtubule motor family protein ) HSP 1 Score: 47.4 bits (111), Expect = 8.2e-06 Identity = 32/101 (31.68%), Postives = 53/101 (52.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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