Csor.00g081540 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAATCCAACGCGTGGGTTCTATTGTTAATGGCGATCTACTTCGGTGTTGTCAATTGCATTGATGACAAATGCGCCGCTTGCAATGCCGTTGCCGTAAGTTCTTGTTCTTAACAATTCTCTGTTCCCCTTTGGATTATTTTTGTTGTTGTTTTTTTTTTCTTTTTTGTTTGGTCTCCGAATCGTGAAAGCCCTTCATCGTTTTGCATATTTTTATGTGGCGCGTGCCTGAATCTGATCACTGTCTTTTACTGTTTTTGGATTGGCTTTTACTTTCTAGTCATCCTTCTCTGTTGCATTGTCTTATAGTTTGGTTTCAACTTAGTTGTATGTGTTCCTTTTCTTTGGTGGATAACTTCATTTTCTTGTTGGATGTCTAAGTAATTTCTCTTGCTAATGCTGAATTGATCGTAATCCCGCTTAGCATCGCTAATGCTAACTAGTAAATATACGAAAGGGGACCTAACTTCCGTAATTATTGTTCGCAGGAAGAGATAGAACGTGGACTTTCCAATGTAAGGCGATGTTCCTTTCTATAGAAAAATTCAACCACAGTTTTAGACGGTTTCTAAGTGTTATAGTGGGGCTCCAATAACCAAAAAGTAATTACATGTTTAACTAGGAAAAACCGAGGAATCATTTAGATATGAGACATCGGTTGGATTCTAAAGGTCAGCGTAAGGGGAAGGTGATTGACTACAGGTAAAACACCAACCTCCCGATTTTCAGGCTGCTCTTTTTCCCTTGGCACGTTTAGAACATTTCTTATTAATATGTAACAAAATGCAGCGGTGACAATGGATAGATGAACTGTTTAAATAGTTCAGTAGTAATATATGTTGGGCCGACATCTATGGGGGGAAGAGTAGCTTGTAGAAAGGCCGGTAAATGAAGAAGGTGATATCGATACTGTTAAAATTCCAAATAGTCGCTCAGTTAATAATGTTTGATATCAATTACGCAGAACAGAGACTGTTATTAATATGAAGCAAAATTTTCTTGTACAATTTCATTACTGGATAAAGAGTCGCAATAATTCTGATTTTAATTGCTTGAATTATTTTGAAATCTTACTTTATTATTGAGATTCAGACGTATAGTTCAATTTATGATTTTAATGTGGTAAACATTAAAGAACTCTTTACGTGTTAAAGGTTATTAAAACTGATTATTCTTAGTTACAGTTTTCATATTTGTAAATTGTAAGCTTAAATTTCTGCAGGGTCAGTGAGCTAAGAGTTGTTGAACTCCTGGACGGGCTTTGTGAAAAGATGCAAGATTACACTATCGAGAAGGTACTTCTCTTTGAAATTAACTATTTGATCTTAGTTGGATTGGACTCTAGAAGATTGGTTAATTTCTGACAGTCGGGGGGCTTATTTTGTGAGATAATTGTTTCATCTGTTCTTGGTGCAGACAGATTCAACTGGAAAACAGTGGATCAAAGTGGATGACTGGGACAACTTGACAAGTGTGTGGCAAATTTAAGCTTCTATTTTTCATTGAGTTCCTACTCAATAAACCTATGTTTCTTTTGTTTTTGTTTTTGTTGTTTGTTTATTTGTTTATTTGTTATTTTTGTTATTGTTGTTGTTGTGTGTGTGTGTGTGTTTTGGCTACTGAAATTAACACTTGAAACTTTTACTCCAGTTGTTGAATGTTTGATAGCTAACTATCGTGCACTTGATGCATAACAAGAATCAAAAGTGGCCTGGACTGAATTTATTTAGATCTTGGTCATTCTCCAAATTCACTTTCTTGTAGATGACTGATATTTATAGCTTGCTGCGTTTGCATATGAAATTCTTTTTGCTTGTTTGTTATAATGCAAACATTTATTTGCTTTCATTGTAACAGATAAACAAGAAGCTCGGGCTTATTCAAAAGATATATCAACTTATTGTGGGAGGTGAGACTGTATTTTGTGATGATTATTCAGCGATTATAATTAAGCTGGTTCATTTAGATTTATGATTTTCCCAATCTAATGTTGTTGTCATTATCGAAACAGATTATTAGAGGAAACAGAAGATGATGTAAGTTGACATGTTTGCCTATGAATAATTTCTTTTTCTTTTATTTCTTTTTTCCCTCTCAACAGATCTAAGCAATTTCTTGATATTGATGAACCTGCAGTTGGCAGAGTTGATTAAGAAAGGATCTGTCAGACCAGGTGCTGTTAGCAAAGTACTATGCCATGATTTGAGCAGGCATTGCAGCAAGGCGAGGTAAGTCTTAATTTGCTGTTCGTGAACCTCTGAAAAGTGCTTTTATATCAATTTCAAATGTTAATTTGACTATGAAGTTGATCTTGTGATAAAAATGTTCATTCTGCACTGATTAAAGAATTAGTTATTGTAGTACTTAACTGCTCCATCAAAATAGTTCTCTTAGGTCTATTGGATAATGAATTTGTTTTTAGTTCTGTTTTTTAAATTTATGTTTGTTCCCTCTTAATTTCAATACTGTGGTTGTCACATTTCTTAAAAGAAATATTTGAATTCTAAGACCTAGCTTGGTTTGTTCCCTTTCTAGTTTTCAAGACCTAGCTTGGTTTTTGAAAACGATGGTAGAAAGTGGATTACAAAATAAATGAACTTATAGGTGAAAGTGAGTTTATAAGCTTAGTGTTCAAAAATCTAAAACTAAATGTTTATCAAAGGGAGCTTTAACTACCTCTTTCGATTATTGATTTCAAAATAAGTATTGGTGGATTTAGAAAGCAGAACAAGCGTTATTTTTAGAACATCTAAAATAATGATATGTAACCTAAAGTACTTTTTATATAACAGTGACCTATGAATTTAACCTACCTCAGAGTCTAGATGGCGGTTCCTATTTGTGATAAAGACGAAAACCATAGCCACTGTTTTAGATTACGTTTCCCTTTTCGTCATTTGACCATTTTGGCAGATTTGTGAAATCTTATAGTTTCAATACGTAATAAACAGTTGCCACCTTGTTTGTGTAAAGCAGTGTTCAGCTGAATGACGATGATGATGAAGCAGATGGGGAGCTATGA ATGAAATCCAACGCGTGGGTTCTATTGTTAATGGCGATCTACTTCGGTGTTGTCAATTGCATTGATGACAAATGCGCCGCTTGCAATGCCGTTGCCGAAGAGATAGAACGTGGACTTTCCAATGAAAAACCGAGGAATCATTTAGATATGAGACATCGGTTGGATTCTAAAGGTCAGCGTAAGGGGAAGGTGATTGACTACAGGGTCAGTGAGCTAAGAGTTGTTGAACTCCTGGACGGGCTTTGTGAAAAGATGCAAGATTACACTATCGAGAAGACAGATTCAACTGGAAAACAGTGGATCAAAGTGGATGACTGGGACAACTTGACAAATAAACAAGAAGCTCGGGCTTATTCAAAAGATATATCAACTTATTGTGGGAGATTATTAGAGGAAACAGAAGATGATTTGGCAGAGTTGATTAAGAAAGGATCTGTCAGACCAGGTGCTGTTAGCAAAGTACTATGCCATGATTTGAGCAGGCATTGCAGCAAGGCGAGTGTTCAGCTGAATGACGATGATGATGAAGCAGATGGGGAGCTATGA ATGAAATCCAACGCGTGGGTTCTATTGTTAATGGCGATCTACTTCGGTGTTGTCAATTGCATTGATGACAAATGCGCCGCTTGCAATGCCGTTGCCGAAGAGATAGAACGTGGACTTTCCAATGAAAAACCGAGGAATCATTTAGATATGAGACATCGGTTGGATTCTAAAGGTCAGCGTAAGGGGAAGGTGATTGACTACAGGGTCAGTGAGCTAAGAGTTGTTGAACTCCTGGACGGGCTTTGTGAAAAGATGCAAGATTACACTATCGAGAAGACAGATTCAACTGGAAAACAGTGGATCAAAGTGGATGACTGGGACAACTTGACAAATAAACAAGAAGCTCGGGCTTATTCAAAAGATATATCAACTTATTGTGGGAGATTATTAGAGGAAACAGAAGATGATTTGGCAGAGTTGATTAAGAAAGGATCTGTCAGACCAGGTGCTGTTAGCAAAGTACTATGCCATGATTTGAGCAGGCATTGCAGCAAGGCGAGTGTTCAGCTGAATGACGATGATGATGAAGCAGATGGGGAGCTATGA MKSNAWVLLLMAIYFGVVNCIDDKCAACNAVAEEIERGLSNEKPRNHLDMRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTDSTGKQWIKVDDWDNLTNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSVRPGAVSKVLCHDLSRHCSKASVQLNDDDDEADGEL Homology
BLAST of Csor.00g081540 vs. ExPASy Swiss-Prot
Match: Q7JXF7 (Protein seele OS=Drosophila melanogaster OX=7227 GN=sel PE=1 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 8.8e-08 Identity = 40/160 (25.00%), Postives = 75/160 (46.88%), Query Frame = 0
BLAST of Csor.00g081540 vs. ExPASy Swiss-Prot
Match: Q9QXT0 (Protein canopy homolog 2 OS=Mus musculus OX=10090 GN=Cnpy2 PE=1 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 4.4e-07 Identity = 44/184 (23.91%), Postives = 84/184 (45.65%), Query Frame = 0
BLAST of Csor.00g081540 vs. ExPASy Swiss-Prot
Match: Q9Y2B0 (Protein canopy homolog 2 OS=Homo sapiens OX=9606 GN=CNPY2 PE=1 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 2.8e-06 Identity = 38/154 (24.68%), Postives = 73/154 (47.40%), Query Frame = 0
BLAST of Csor.00g081540 vs. ExPASy Swiss-Prot
Match: Q5M7D4 (Protein canopy homolog 1 OS=Xenopus laevis OX=8355 GN=cnpy1 PE=2 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 5.4e-05 Identity = 34/128 (26.56%), Postives = 62/128 (48.44%), Query Frame = 0
BLAST of Csor.00g081540 vs. ExPASy Swiss-Prot
Match: Q5HZV5 (Protein canopy homolog 3 OS=Xenopus tropicalis OX=8364 GN=cnpy3 PE=2 SV=2) HSP 1 Score: 48.1 bits (113), Expect = 1.2e-04 Identity = 42/171 (24.56%), Postives = 74/171 (43.27%), Query Frame = 0
BLAST of Csor.00g081540 vs. NCBI nr
Match: XP_022936576.1 (protein canopy-1-like isoform X2 [Cucurbita moschata] >KAG6591211.1 Protein canopy-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024094.1 Protein canopy-1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 367 bits (941), Expect = 5.59e-128 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of Csor.00g081540 vs. NCBI nr
Match: XP_023535791.1 (protein canopy-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 363 bits (933), Expect = 9.29e-127 Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 0
BLAST of Csor.00g081540 vs. NCBI nr
Match: XP_022936575.1 (protein canopy-1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 362 bits (929), Expect = 3.92e-126 Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 0
BLAST of Csor.00g081540 vs. NCBI nr
Match: XP_022975790.1 (protein canopy-1-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 361 bits (927), Expect = 7.64e-126 Identity = 178/181 (98.34%), Postives = 179/181 (98.90%), Query Frame = 0
BLAST of Csor.00g081540 vs. NCBI nr
Match: XP_022975788.1 (protein canopy-1-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 357 bits (915), Expect = 5.35e-124 Identity = 178/182 (97.80%), Postives = 179/182 (98.35%), Query Frame = 0
BLAST of Csor.00g081540 vs. ExPASy TrEMBL
Match: A0A6J1F7V4 (protein canopy-1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443141 PE=4 SV=1) HSP 1 Score: 367 bits (941), Expect = 2.71e-128 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of Csor.00g081540 vs. ExPASy TrEMBL
Match: A0A6J1FE32 (protein canopy-1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443141 PE=4 SV=1) HSP 1 Score: 362 bits (929), Expect = 1.90e-126 Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 0
BLAST of Csor.00g081540 vs. ExPASy TrEMBL
Match: A0A6J1IHQ2 (protein canopy-1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111476381 PE=4 SV=1) HSP 1 Score: 361 bits (927), Expect = 3.70e-126 Identity = 178/181 (98.34%), Postives = 179/181 (98.90%), Query Frame = 0
BLAST of Csor.00g081540 vs. ExPASy TrEMBL
Match: A0A6J1IKA3 (protein canopy-1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111476381 PE=4 SV=1) HSP 1 Score: 357 bits (915), Expect = 2.59e-124 Identity = 178/182 (97.80%), Postives = 179/182 (98.35%), Query Frame = 0
BLAST of Csor.00g081540 vs. ExPASy TrEMBL
Match: A0A1S3BWB0 (protein canopy-1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493830 PE=4 SV=1) HSP 1 Score: 338 bits (866), Expect = 7.94e-117 Identity = 166/181 (91.71%), Postives = 172/181 (95.03%), Query Frame = 0
BLAST of Csor.00g081540 vs. TAIR 10
Match: AT1G42480.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3456 (InterPro:IPR021852); Has 177 Blast hits to 177 proteins in 59 species: Archae - 0; Bacteria - 0; Metazoa - 140; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 226.1 bits (575), Expect = 2.3e-59 Identity = 104/160 (65.00%), Postives = 136/160 (85.00%), Query Frame = 0
BLAST of Csor.00g081540 vs. TAIR 10
Match: AT1G42480.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3456 (InterPro:IPR021852); Has 152 Blast hits to 152 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 169.5 bits (428), Expect = 2.5e-42 Identity = 84/161 (52.17%), Postives = 119/161 (73.91%), Query Frame = 0
BLAST of Csor.00g081540 vs. TAIR 10
Match: AT1G42480.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3456 (InterPro:IPR021852); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 142.9 bits (359), Expect = 2.5e-34 Identity = 64/91 (70.33%), Postives = 82/91 (90.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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