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Csor.00g080980 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTTCAACTTCATGGATTCAGATAACATTTACAATCATCATAGTCATGTGGATCATAGAAGTGAATCCTTGCGATATTATTATTCAGATCAGGGCTACTCGTCGACCCTGATGGAGAAGAGGCAACTATTTCTGAGGAGCTATCAGTTCTGCACAAAAAAGAGTGTACCCCAGAAGATAAACGCCTCCCTTCTCAAAATCAAGAGAGTTATATGGGTGAGGCTCAAGAACTTGTTGCTTCATTCCTGCAGGCTCCGAAATGCTTCTCGTTCACGTAGAAGAAGATCTGTTCGTCTCCACCACCCCATTCACTCGCTGTCTTGTTTCTCATGA ATGGCCTTCAACTTCATGGATTCAGATAACATTTACAATCATCATAGTCATGTGGATCATAGAAGTGAATCCTTGCGATATTATTATTCAGATCAGGGCTACTCGTCGACCCTGATGGAGAAGAGGCAACTATTTCTGAGGAGCTATCAGTTCTGCACAAAAAAGAGTGTACCCCAGAAGATAAACGCCTCCCTTCTCAAAATCAAGAGAGTTATATGGGTGAGGCTCAAGAACTTGTTGCTTCATTCCTGCAGGCTCCGAAATGCTTCTCGTTCACGTAGAAGAAGATCTGTTCGTCTCCACCACCCCATTCACTCGCTGTCTTGTTTCTCATGA ATGGCCTTCAACTTCATGGATTCAGATAACATTTACAATCATCATAGTCATGTGGATCATAGAAGTGAATCCTTGCGATATTATTATTCAGATCAGGGCTACTCGTCGACCCTGATGGAGAAGAGGCAACTATTTCTGAGGAGCTATCAGTTCTGCACAAAAAAGAGTGTACCCCAGAAGATAAACGCCTCCCTTCTCAAAATCAAGAGAGTTATATGGGTGAGGCTCAAGAACTTGTTGCTTCATTCCTGCAGGCTCCGAAATGCTTCTCGTTCACGTAGAAGAAGATCTGTTCGTCTCCACCACCCCATTCACTCGCTGTCTTGTTTCTCATGA MAFNFMDSDNIYNHHSHVDHRSESLRYYYSDQGYSSTLMEKRQLFLRSYQFCTKKSVPQKINASLLKIKRVIWVRLKNLLLHSCRLRNASRSRRRRSVRLHHPIHSLSCFS Homology
BLAST of Csor.00g080980 vs. NCBI nr
Match: KAG6590523.1 (hypothetical protein SDJN03_15946, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 221 bits (563), Expect = 1.31e-72 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of Csor.00g080980 vs. NCBI nr
Match: XP_014495653.1 (uncharacterized protein LOC106757494 isoform X2 [Vigna radiata var. radiata]) HSP 1 Score: 78.6 bits (192), Expect = 3.81e-16 Identity = 46/100 (46.00%), Postives = 65/100 (65.00%), Query Frame = 0
BLAST of Csor.00g080980 vs. NCBI nr
Match: QCD98370.1 (hypothetical protein DEO72_LG6g3090 [Vigna unguiculata]) HSP 1 Score: 78.6 bits (192), Expect = 4.94e-16 Identity = 46/100 (46.00%), Postives = 65/100 (65.00%), Query Frame = 0
BLAST of Csor.00g080980 vs. NCBI nr
Match: XP_017418063.1 (PREDICTED: uncharacterized protein LOC108328681 [Vigna angularis]) HSP 1 Score: 78.2 bits (191), Expect = 5.40e-16 Identity = 45/100 (45.00%), Postives = 65/100 (65.00%), Query Frame = 0
BLAST of Csor.00g080980 vs. NCBI nr
Match: XP_014495652.1 (uncharacterized protein LOC106757494 isoform X1 [Vigna radiata var. radiata]) HSP 1 Score: 78.6 bits (192), Expect = 5.90e-16 Identity = 46/100 (46.00%), Postives = 65/100 (65.00%), Query Frame = 0
BLAST of Csor.00g080980 vs. ExPASy TrEMBL
Match: A0A1S3TPD2 (uncharacterized protein LOC106757494 isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106757494 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.85e-16 Identity = 46/100 (46.00%), Postives = 65/100 (65.00%), Query Frame = 0
BLAST of Csor.00g080980 vs. ExPASy TrEMBL
Match: A0A4D6MC86 (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g3090 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 2.39e-16 Identity = 46/100 (46.00%), Postives = 65/100 (65.00%), Query Frame = 0
BLAST of Csor.00g080980 vs. ExPASy TrEMBL
Match: A0A1S3TPK1 (uncharacterized protein LOC106757494 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106757494 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 2.85e-16 Identity = 46/100 (46.00%), Postives = 65/100 (65.00%), Query Frame = 0
BLAST of Csor.00g080980 vs. ExPASy TrEMBL
Match: V7D0U9 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G220700g PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 3.00e-16 Identity = 46/100 (46.00%), Postives = 65/100 (65.00%), Query Frame = 0
BLAST of Csor.00g080980 vs. ExPASy TrEMBL
Match: A0A0L9U9C1 (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan03g270300 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 3.94e-16 Identity = 45/100 (45.00%), Postives = 65/100 (65.00%), Query Frame = 0
BLAST of Csor.00g080980 vs. TAIR 10
Match: AT5G26731.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 53.9 bits (128), Expect = 9.5e-08 Identity = 35/76 (46.05%), Postives = 47/76 (61.84%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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