Csor.00g080910 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g080910
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr01: 12778615 .. 12778962 (+)
RNA-Seq ExpressionCsor.00g080910
SyntenyCsor.00g080910
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAGTGTACCGAGTAATGTGGGGGTGTGGGAACAAACAGCTTTTCATCATTCTGACTCTGATGGGTCTTCTCGTCCACATATAAAAGCAATGGTGAGGGATCCCTTTGATGTGTTCCTGGAAAGTTACCAAGAATCGCGGCTGCTCTTTGTTTGGCACCTTTTACTCTCTCTTTTCTCTTCTTTAGTCATTCGTTTATCCGATTCTCAAGTACTTGTTTCTTGTAACTTCACACAGCATCTTCAAATCTCACTGATGGAATCCGTCGGAATCAGCATCTTCTCCGTTCTTTCCTGGATTCCGCCGCAGTATTTGTCCACGAATGTAAGTGAGTTTCTTGTCTAG

mRNA sequence

ATGTTGAGTGTACCGAGTAATGTGGGGGTGTGGGAACAAACAGCTTTTCATCATTCTGACTCTGATGGGTCTTCTCGTCCACATATAAAAGCAATGCATCTTCAAATCTCACTGATGGAATCCGTCGGAATCAGCATCTTCTCCGTTCTTTCCTGGATTCCGCCGCAGTATTTGTCCACGAATGTAAGTGAGTTTCTTGTCTAG

Coding sequence (CDS)

ATGTTGAGTGTACCGAGTAATGTGGGGGTGTGGGAACAAACAGCTTTTCATCATTCTGACTCTGATGGGTCTTCTCGTCCACATATAAAAGCAATGCATCTTCAAATCTCACTGATGGAATCCGTCGGAATCAGCATCTTCTCCGTTCTTTCCTGGATTCCGCCGCAGTATTTGTCCACGAATGTAAGTGAGTTTCTTGTCTAG

Protein sequence

MLSVPSNVGVWEQTAFHHSDSDGSSRPHIKAMHLQISLMESVGISIFSVLSWIPPQYLSTNVSEFLV
Homology
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BLAST of Csor.00g080910 vs. NCBI nr
Match: KAG6608297.1 (hypothetical protein SDJN03_01639, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 137 bits (344), Expect = 1.44e-40
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  MLSVPSNVGVWEQTAFHHSDSDGSSRPHIKAMHLQISLMESVGISIFSVLSWIPPQYLST 60
          MLSVPSNVGVWEQTAFHHSDSDGSSRPHIKAMHLQISLMESVGISIFSVLSWIPPQYLST
Sbjct: 1  MLSVPSNVGVWEQTAFHHSDSDGSSRPHIKAMHLQISLMESVGISIFSVLSWIPPQYLST 60

Query: 61 NVSEFLV 67
          NVSEFLV
Sbjct: 61 NVSEFLV 67

The following BLAST results are available for this feature:
BLAST of Csor.00g080910 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g080910 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6608297.11.44e-40100.00hypothetical protein SDJN03_01639, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g080910 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g080910 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g080910.m01Csor.00g080910.m01mRNA