Csor.00g080130 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g080130
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr01: 4015538 .. 4019002 (-)
RNA-Seq ExpressionCsor.00g080130
SyntenyCsor.00g080130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGAGGACCATCGCAAACGCCGTCAGCTTCGATTCCCACTTTCTCCTTGCAATATGTCTGGCAATTAGGTGGCAGAGTGTTGTGGCAGGTTCCCGGTTTGAACATTGGCAACTGCCTCTGGCAATACCTTTGTCCTCCCACATTTTTAACCATCATTTCTTCCCCTACAACATAATCCAACACTTTTATTTTTAATTATGCATAATAAATATTTGGAACGGCTCAGACTTTAGCAAATATTGTCCTCTTTGGGCTTTCTTTTGAGGGGAATGTAACGACTGAGGCCCATCGTTAACAGATATTGTCCTCTTTGGGCTTTCCCTTGAGGGGAATGTAACGCCCAGGTCCACCACTAGCGGATATTGTCCTCTTTAGGCTTTCCCTTGAGGGAAAGAATGTAATGACTCAAACCCACCGCATGTATTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTCCCCTTAATGCTTCTAAAACGTGTCTGTTAGGGGAAGGTTTCCACACCCAAAGAGTGTTTTGTTCTCCTCCCTAACCAATGTGAGACATCACACTTCAGATCATCAATCTGACATCTCTCAACTGAACTATGCACGCCCTTGCAAGGGGTGTTTTGTTCTCCTCCCCAACCAATGTGGGACATTACATGCAGTTTTGTCTACGGGTATTTATAGGTTGGGTTGGGTCGGATCGGGTTGAGACTATTGGATGATGAAAATCCCACGTCTGCTAATTTAGGAAATGATCATGGGTTTATATAACCAAGGAATACTATCTCCATTCGATGAGGTCTTTTGGGCAGCTTAAAGCAAAGCCATGAGAGCTTATACTCAAAGTGGACAATATCATACCATCGTGGAGAGTCGTGTTCATCTAACAATGACATTTTTTATAAGTTTGAATATGGCACGAAATTCTCAAAATTCTCGAACGAACCCATAAAATTTTTAGTTATTTGAAATCAATCCAATTCAAACAGTAAAAAATTAAGTTGGATTAAAAGAGATTCTTACCACTGAGAATGAGGAGAACGATAAGGAACAAGGACTGAAAGAGAGCTCGAGACATTTTTCTTCTTTTAGGATCTTGCAAATTCTACTTCTTAACGTTCACAACTACGAATTTTTATGTTTATCGTCTGTGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAATAAATAAATATAAATAAAGGCATCATAAATTTGGTAACCTAATTAAGATACTCGATCCATGTAATACTCTCTTAAATGCTCATCCTTAATATCACATATTGGAATACAATATATGTTTTTTTTTTTTTTTTTTTTTTTGTCTCGCGTTAAAATCTAAATTATTTTATTTAGTCGATATGCTTTGAACTTTATTATATTTTAATTTTTATATTTTAAAATACCTAAACTTAGTTCGTGTACTTTCAATCAAGTTTAAAATCGGGTTACAAACTCTATTCGGATTGCTCGAATCACCAACCTACCCAATTTAGGTTTAGGGAATTTTTTTTTTTAAATAACAATAAATTAATGTAAGACCAATTTTAAATTTTATTAAAAGTGAAATTAAAAAGGTAAAAATAACATATTTATTTTGTTTCCAATTGTAGGAATATTATATTCCTTTCAGATTTAATGATTTAACGGAAGAAAATTATTTGTAATATTCTCAACAAATAATAATAATAATAATAAATAAATAAATAAATATATATATATATATATATATATATATATATATATATATATATATATATTCTAAAAAAAAGTATGTAAATTAAATATTTTGTTATTAAAATTAAAATAGAACTTATAATAATTTTTTTTTCGTGTTATACCAATAAATATTTATGAGTTATCGAATGAAATTAGAGGATTAAAAAAAACAAAACAAGGACATGGAATGAAAACCTAGTACATTCTCGAAGAGACAGCTTTACAAGTGAAGAACGAATATTGGGTGGGATAATGACGTTTTTTTTTTTCTTTTCGGAGGTTAATTCGATATTAATATTGATATCGAACAAAGCTACTCAGTATAATTCAATACTTGGAAAAAAATTGAGCGGTTGAGGAATATATTAAAAATATTTAATTAACGAGAATCGATAAAATAAAGGAATTAGAATACCAAATGAACTCGAAAGGGACATGAGGCAACATCGGGACGTAACGAAATGACATTGCAATGCTGAAAACCCACAAAATTACACATCTTGCTTTGGTCGAAGTGCTATCAATTTCAAGTTAACGTCAATCATATTTCAAATAACCAAAGATCGACGATGTGTGAATTTTGTACGACGAACCATCCTAATTACAACAATATATGACCGTTATAAAACCATATTTTTTTAGAAAAAAAAAAAATCAATTTTCCAAATTATTTATAAGCTTTAAAATAAATAAAAAATGCTCGTGTAATGTAAGAAGGGAACATGAAATTCATTTTATTCCGGCCAAATTTTGATAAATAAATAATTTGCTATGGTTCTCTGATTACTAACGAGGAATATGGTTAAAAAAATATTTACCCACTTAATTTTTTTTTTACAATTTAATCTTATTTTATGTTTCTCGTAAGGGTTTATGGTTGTTCCAGAAGAAATGAAACAAGAGATAGAGTAGAACGATAACAGTTTTTGTACGAGATTTACCCAATACTAGATGCAAAAGTACCTAATAGATCGATATGAACATCACGAGCTGTCTTATCATAAACCCTGTTGTAGCTTAAACTTTCTTCCCGGTTCCTTATTACATAACCCGAGTTCAGAGAAGAAAGACACAAGAGGGTCCTACCGAGAACGTGGTCAGAAATTCATAAATTATAACTTATGAATCGATCACTGGGTTTTATCCAACTAAAAACTCCAGATTGAAATGATAAAATTAGAATCACTAATGAAAAAAATGATCGTAAGAAGGTTTAGAAGTCGTTTTTCGATGTAATTGAACGCGAAGAACAGTACCTCAACTTCCCATCACCCATTTTTGTGTAAAAACATTTGTTCTAAGGTTGGAAAAAAAAAACATATGACCTTAACAAAAAGATTTTAAAAAAATTGTTTTAAAAGACAAAAATCTCATAATTTGGGCTAAATTTTTAGGTCACCGTACAAAAAACCGGAAATTCGTACCGAGCATCATCGGAGTTTCTGTATGTTGGTCAGAATCCTGTGAAGTTGAACGAGGAAAATTCTATTGCAAATTCAAGGGATCCTGGGAGAAGCTGCGAAAAGTGTAGCCATTTCAGTTCCCAACGCGAAATCGAAGCTGAAAGAGAAGCAGATTAGTTTGAAGAAGATTCATCGACATAGCCGATGTTCGATTTCCAGTAATTTGGTATGAACAATATCTTTTGAGATTCTTGTTACTGTAATTAGTTTACTCTCCTCACCGACGATAAATTGGCAGCGATTTCATTGA

mRNA sequence

ATGACGAGGACCATCGCAAACGCCGTCAGCTTCGATTCCCACTTTCTCCTTGCAATATGTCTGGCAATTAGGTGGCAGAGTGTTGTGGCAGGGATCCTGGGAGAAGCTGCGAAAAGTGTAGCCATTTCAGTTCCCAACGCGAAATCGAAGCTGAAAGAGAAGCAGATTAGTTTGAAGAAGATTCATCGACATAGCCGATGTTCGATTTCCAGTAATTTGCGATTTCATTGA

Coding sequence (CDS)

ATGACGAGGACCATCGCAAACGCCGTCAGCTTCGATTCCCACTTTCTCCTTGCAATATGTCTGGCAATTAGGTGGCAGAGTGTTGTGGCAGGGATCCTGGGAGAAGCTGCGAAAAGTGTAGCCATTTCAGTTCCCAACGCGAAATCGAAGCTGAAAGAGAAGCAGATTAGTTTGAAGAAGATTCATCGACATAGCCGATGTTCGATTTCCAGTAATTTGCGATTTCATTGA

Protein sequence

MTRTIANAVSFDSHFLLAICLAIRWQSVVAGILGEAAKSVAISVPNAKSKLKEKQISLKKIHRHSRCSISSNLRFH
Homology
[Close]
BLAST of Csor.00g080130 vs. NCBI nr
Match: KAG6607384.1 (hypothetical protein SDJN03_00726, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 144 bits (363), Expect = 3.42e-43
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 

Query: 1  MTRTIANAVSFDSHFLLAICLAIRWQSVVAGILGEAAKSVAISVPNAKSKLKEKQISLKK 60
          MTRTIANAVSFDSHFLLAICLAIRWQSVVAGILGEAAKSVAISVPNAKSKLKEKQISLKK
Sbjct: 1  MTRTIANAVSFDSHFLLAICLAIRWQSVVAGILGEAAKSVAISVPNAKSKLKEKQISLKK 60

Query: 61 IHRHSRCSISSNLRFH 76
          IHRHSRCSISSNLRFH
Sbjct: 61 IHRHSRCSISSNLRFH 76

The following BLAST results are available for this feature:
BLAST of Csor.00g080130 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g080130 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6607384.13.42e-43100.00hypothetical protein SDJN03_00726, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g080130 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g080130 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g080130.m01Csor.00g080130.m01mRNA