Csor.00g079570 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTCACGAACTCAGAGATGGTTCTCTCCCAGTTCTCTAAAATCAACATTTCTCTCTTTACTTCACCAATCCATCGCAATTTTAGCGCATTTCCGGCCAATAAACCAATTATCGCGGCAACAGCAGCCCCCATTTTCACATCGACTTCATTCCAGTTGCCCAAATCCACTGTAACTCCGGCCGAACCAATTCCGATCACCGATTTTTCGGAATATCCGGAAGAAATCCAGTTATCCATATCCCCTGATAAGCTATTTGTGCCGCCGGAAACAGATATTTCCGGCGGCGGTGGTACGGGGCCGAGAATCTTGAAAGGGTCGAACATTGTATTAGGTCGGTACGCGAGGGATGCGCAGGTTTCTGAGGCGGATTTTGTGAAGAGTAGTGTGACAACTGAGGATTGCCCTTCTGATGGGCTTCCTGAATTTGCGCTTGTTGGGCGCTCGAATGTGGGGAAATCTTCGCTGTTGAACTCGCTTGTTCGGCGGAAGAAGCTTGCTCTTACATCCAAGAAACCAGGTGAGTGGTTTGTTCTGACCTAAGTTCATCTTGATTGTTTGGGTTCTGTTCATATGTTGTAGCTGTTGTGATGTGTTTGGTGTAGTTTCAAACTGTGTAAGAGATGAATATGGATCAAAGAATTAGAGGGCTGTTCAAGGAAATAGAAGATAATTGTACAACATAGCTTAACAGAACAAATATTTTAAGAGCTCATTACCTATTAGATCCATTAAGGAAAGCACTGTAAGCGGATTTTGTATGCTTTGACATGTTACGTATCATTGTCAACCTCACGGTTTTAAAACATGTCTAATAGGGAGAGGTTTCCACCTTATAAGGAACACTTCGTTCCCCCCTCTCCAACCAACGTGGGATCTTACAATTCACCCCCTTGGGGCCCAACGTCCTCATTGGCACACCGCTTGATGATTGACTCTGATACCATTTATAACAGCTCAAGCCCACCACTAACATATTATCCGCTCTGACCCGTTACGTATCACTGTCAACCTCACAGTTTTAAAACGCGTCTAATAGGGAGAAGTTTCGACACTCTTGTAAAGAATGTTTTGCTTCATGTTGTGAAAACTTCTAGCTTAGTAATTTGCGAATGGGTAGAAAAAGGAATAAGCGAGTTAATTAGAGGCCCGAGGGTTTATTTGCATCATAATTGTAGGCGGGCTATAGGCCTTTTTGGTTATCTTATGAGGGATACATATGCACTAAGGAATTGTGAGGGAGACTTTGCGTGCGGGCCACAAGAGCGGTACCAAATTGAGGCAAACTCGAAATATTAGATGTGATCTCAAAATAACAAGGGTTCAGGTCGTCTCTGTGAAAATATACTTTCTGCTTTCTCTATATTGTCTCTTACTGTACGTACCTGAAGCCATTGATATAAACCTTTAGCTAATGTTCATCTTTGCATTTTCACTCTCTTATCTTTGTGTTCATCTAGATCGAGTGTGTGCGTTATTGTGTGATCCTAATAGTCTCAGCAACCAAATCTAATAGGTGAGGCGGTTGTCCTATGAATATAGTCGAGGTGCATGCATGCTAGTCCAAACCGTCACAGATATTAAAAAAAACGGAGGGGGAGGGTAGGCACCTAACAATATTTTTGTGAACTTTAAACCTCAAATGTCCGAAATCTTTTGTACAGTTTAATCTCATATAGACTCTCCCATTTGTATTATCAGAATGTTGGAAATGGATATAAACATTTCCATGTCTTCTTGCAGGAAAGACACAGTGCATAAACCACTTTCGAATTAACGATAGTTGGTACTTGGTCGATTTGCCGGGATACGGGTATGTCTCAGCTTCAACGTGTTTCGATGTCGGTCAGAAGATCGTTTTTCGACTTTCAAACATGCTTTTTAAGTGATTTGAGTTCACTGTCCAACTTTGTTCCTTCTATGCGTTTAGGTATGCAGCTGCACCACAGGAACTCCGAACGGATTGGAACAAGTTTACGAGGAACTATTTTCTGAATCGGTCGACGTTGGTTTCGGTTTTCCTTCTTATAGATGCAAGCATTCCTGCCAAACAAATTGATCTTGACTATGCTAGTTGGTTGGGTCAGAATCAGGTAATTTAGTTTTTCATTCAACTGATCTGATGCCTTGGTTTCTAAGAAATTTGGATATGGAATGGTCTCTGCAGATTCCAATGACAATAATATTTACGAAATGTGACAAACGAAAGAAGAAAAAGAACGGTGGAAAACGACCCGAAGAAAACGTGAGCGACTTTCACGAACTGATAAGTGGTTTTTTCCAAACGACTCCGCCGTGGATCATGACGAGCAGTGTCACCCATCAGGGTCGGGATGAAATACTTCTACATATCGCTCAGCTGAGGAACTATTGGCTCAAGCACTGAAAAAGCACCTTGCAGACTCGCCTTCACGAGTCAACCAGGTACAATATCTTATCAGTTATGCTCGTGTTGGCAATACATAAAGATCGTTATTTATCCAAGTACAGAAAATAGGTTCTCACGATTTCGAGCGTGAATCAACAATGACTGCAAATAAAAGCGCTCGATCTCGAGTCGGATTGATTGAATATGAATCATGAATTATATATTGAATAGCCTGCACTGTTTGACAGTGTCCATGAATTTTGGAGAGTTTACAAAGCAGCAGCGCTGGCAAGAGTGTCCCAATGCTTACTTTAA ATGCTCACGAACTCAGAGATGGTTCTCTCCCAGTTCTCTAAAATCAACATTTCTCTCTTTACTTCACCAATCCATCGCAATTTTAGCGCATTTCCGGCCAATAAACCAATTATCGCGGCAACAGCAGCCCCCATTTTCACATCGACTTCATTCCAGTTGCCCAAATCCACTGTAACTCCGGCCGAACCAATTCCGATCACCGATTTTTCGGAATATCCGGAAGAAATCCAGTTATCCATATCCCCTGATAAGCTATTTGTGCCGCCGGAAACAGATATTTCCGGCGGCGGTGGTACGGGGCCGAGAATCTTGAAAGGGTCGAACATTGTATTAGGTCGGTACGCGAGGGATGCGCAGGTTTCTGAGGCGGATTTTGTGAAGAGTAGTGTGACAACTGAGGATTGCCCTTCTGATGGGCTTCCTGAATTTGCGCTTGTTGGGCGCTCGAATGTGGGGAAATCTTCGCTGTTGAACTCGCTTGTTCGGCGGAAGAAGCTTGCTCTTACATCCAAGAAACCAGGAAAGACACAGTGCATAAACCACTTTCGAATTAACGATAGTTGGTACTTGGTCGATTTGCCGGGATACGGGTATGCAGCTGCACCACAGGAACTCCGAACGGATTGGAACAAGTTTACGAGGAACTATTTTCTGAATCGGTCGACGTTGGTTTCGGTTTTCCTTCTTATAGATGCAAGCATTCCTGCCAAACAAATTGATCTTGACTATGCTAGTTGGTTGGGTCAGAATCAGATTCCAATGACAATAATATTTACGAAATGTGACAAACGAAAGAAGAAAAAGAACGGTGGAAAACGACCCGAAGAAAACACTCGCCTTCACGAGTCAACCAGTGTCCATGAATTTTGGAGAGTTTACAAAGCAGCAGCGCTGGCAAGAGTGTCCCAATGCTTACTTTAA ATGCTCACGAACTCAGAGATGGTTCTCTCCCAGTTCTCTAAAATCAACATTTCTCTCTTTACTTCACCAATCCATCGCAATTTTAGCGCATTTCCGGCCAATAAACCAATTATCGCGGCAACAGCAGCCCCCATTTTCACATCGACTTCATTCCAGTTGCCCAAATCCACTGTAACTCCGGCCGAACCAATTCCGATCACCGATTTTTCGGAATATCCGGAAGAAATCCAGTTATCCATATCCCCTGATAAGCTATTTGTGCCGCCGGAAACAGATATTTCCGGCGGCGGTGGTACGGGGCCGAGAATCTTGAAAGGGTCGAACATTGTATTAGGTCGGTACGCGAGGGATGCGCAGGTTTCTGAGGCGGATTTTGTGAAGAGTAGTGTGACAACTGAGGATTGCCCTTCTGATGGGCTTCCTGAATTTGCGCTTGTTGGGCGCTCGAATGTGGGGAAATCTTCGCTGTTGAACTCGCTTGTTCGGCGGAAGAAGCTTGCTCTTACATCCAAGAAACCAGGAAAGACACAGTGCATAAACCACTTTCGAATTAACGATAGTTGGTACTTGGTCGATTTGCCGGGATACGGGTATGCAGCTGCACCACAGGAACTCCGAACGGATTGGAACAAGTTTACGAGGAACTATTTTCTGAATCGGTCGACGTTGGTTTCGGTTTTCCTTCTTATAGATGCAAGCATTCCTGCCAAACAAATTGATCTTGACTATGCTAGTTGGTTGGGTCAGAATCAGATTCCAATGACAATAATATTTACGAAATGTGACAAACGAAAGAAGAAAAAGAACGGTGGAAAACGACCCGAAGAAAACACTCGCCTTCACGAGTCAACCAGTGTCCATGAATTTTGGAGAGTTTACAAAGCAGCAGCGCTGGCAAGAGTGTCCCAATGCTTACTTTAA MLTNSEMVLSQFSKINISLFTSPIHRNFSAFPANKPIIAATAAPIFTSTSFQLPKSTVTPAEPIPITDFSEYPEEIQLSISPDKLFVPPETDISGGGGTGPRILKGSNIVLGRYARDAQVSEADFVKSSVTTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRINDSWYLVDLPGYGYAAAPQELRTDWNKFTRNYFLNRSTLVSVFLLIDASIPAKQIDLDYASWLGQNQIPMTIIFTKCDKRKKKKNGGKRPEENTRLHESTSVHEFWRVYKAAALARVSQCLL Homology
BLAST of Csor.00g079570 vs. ExPASy Swiss-Prot
Match: O81004 (GTP-binding protein At2g22870 OS=Arabidopsis thaliana OX=3702 GN=EMB2001 PE=2 SV=2) HSP 1 Score: 249.6 bits (636), Expect = 4.6e-65 Identity = 120/211 (56.87%), Postives = 152/211 (72.04%), Query Frame = 0
BLAST of Csor.00g079570 vs. ExPASy Swiss-Prot
Match: A5FIZ1 (Probable GTP-binding protein EngB OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / JCM 8514 / NBRC 14942 / NCIMB 11054 / UW101) OX=376686 GN=engB PE=3 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 2.3e-40 Identity = 76/150 (50.67%), Postives = 108/150 (72.00%), Query Frame = 0
BLAST of Csor.00g079570 vs. ExPASy Swiss-Prot
Match: A6L4J3 (Probable GTP-binding protein EngB OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / NBRC 14291 / NCTC 11154) OX=435590 GN=engB PE=3 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 1.1e-39 Identity = 81/172 (47.09%), Postives = 109/172 (63.37%), Query Frame = 0
BLAST of Csor.00g079570 vs. ExPASy Swiss-Prot
Match: Q8A8T4 (Probable GTP-binding protein EngB OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) OX=226186 GN=engB PE=3 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.9e-39 Identity = 75/147 (51.02%), Postives = 101/147 (68.71%), Query Frame = 0
BLAST of Csor.00g079570 vs. ExPASy Swiss-Prot
Match: A0M537 (Probable GTP-binding protein EngB OS=Gramella forsetii (strain KT0803) OX=411154 GN=engB PE=3 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.9e-39 Identity = 76/149 (51.01%), Postives = 101/149 (67.79%), Query Frame = 0
BLAST of Csor.00g079570 vs. NCBI nr
Match: KAG6591656.1 (GTP-binding protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 608 bits (1569), Expect = 1.53e-219 Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0
BLAST of Csor.00g079570 vs. NCBI nr
Match: KAG7024538.1 (GTP-binding protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 551 bits (1420), Expect = 1.47e-196 Identity = 280/286 (97.90%), Postives = 280/286 (97.90%), Query Frame = 0
BLAST of Csor.00g079570 vs. NCBI nr
Match: XP_022936076.1 (GTP-binding protein At2g22870-like [Cucurbita moschata]) HSP 1 Score: 549 bits (1414), Expect = 1.20e-195 Identity = 279/286 (97.55%), Postives = 279/286 (97.55%), Query Frame = 0
BLAST of Csor.00g079570 vs. NCBI nr
Match: XP_023535583.1 (GTP-binding protein At2g22870-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 545 bits (1405), Expect = 2.83e-194 Identity = 277/286 (96.85%), Postives = 278/286 (97.20%), Query Frame = 0
BLAST of Csor.00g079570 vs. NCBI nr
Match: XP_022975913.1 (GTP-binding protein At2g22870-like [Cucurbita maxima]) HSP 1 Score: 540 bits (1392), Expect = 2.71e-192 Identity = 274/286 (95.80%), Postives = 276/286 (96.50%), Query Frame = 0
BLAST of Csor.00g079570 vs. ExPASy TrEMBL
Match: A0A6J1F6H7 (GTP-binding protein At2g22870-like OS=Cucurbita moschata OX=3662 GN=LOC111442787 PE=3 SV=1) HSP 1 Score: 549 bits (1414), Expect = 5.83e-196 Identity = 279/286 (97.55%), Postives = 279/286 (97.55%), Query Frame = 0
BLAST of Csor.00g079570 vs. ExPASy TrEMBL
Match: A0A6J1IKL5 (GTP-binding protein At2g22870-like OS=Cucurbita maxima OX=3661 GN=LOC111476474 PE=3 SV=1) HSP 1 Score: 540 bits (1392), Expect = 1.31e-192 Identity = 274/286 (95.80%), Postives = 276/286 (96.50%), Query Frame = 0
BLAST of Csor.00g079570 vs. ExPASy TrEMBL
Match: A0A0A0LGU2 (EngB-type G domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G888580 PE=3 SV=1) HSP 1 Score: 476 bits (1226), Expect = 1.94e-167 Identity = 243/272 (89.34%), Postives = 252/272 (92.65%), Query Frame = 0
BLAST of Csor.00g079570 vs. ExPASy TrEMBL
Match: A0A5A7T5H0 (GTP-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006340 PE=3 SV=1) HSP 1 Score: 475 bits (1222), Expect = 7.88e-167 Identity = 243/272 (89.34%), Postives = 251/272 (92.28%), Query Frame = 0
BLAST of Csor.00g079570 vs. ExPASy TrEMBL
Match: A0A6J1CLQ0 (GTP-binding protein At2g22870 OS=Momordica charantia OX=3673 GN=LOC111012429 PE=3 SV=1) HSP 1 Score: 468 bits (1203), Expect = 6.85e-164 Identity = 237/273 (86.81%), Postives = 250/273 (91.58%), Query Frame = 0
BLAST of Csor.00g079570 vs. TAIR 10
Match: AT5G11480.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 357.8 bits (917), Expect = 8.5e-99 Identity = 185/281 (65.84%), Postives = 216/281 (76.87%), Query Frame = 0
BLAST of Csor.00g079570 vs. TAIR 10
Match: AT2G22870.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 249.6 bits (636), Expect = 3.2e-66 Identity = 120/211 (56.87%), Postives = 152/211 (72.04%), Query Frame = 0
BLAST of Csor.00g079570 vs. TAIR 10
Match: AT5G58370.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 105.1 bits (261), Expect = 9.9e-23 Identity = 54/142 (38.03%), Postives = 78/142 (54.93%), Query Frame = 0
BLAST of Csor.00g079570 vs. TAIR 10
Match: AT5G58370.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 105.1 bits (261), Expect = 9.9e-23 Identity = 54/142 (38.03%), Postives = 78/142 (54.93%), Query Frame = 0
BLAST of Csor.00g079570 vs. TAIR 10
Match: AT1G08410.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 44.3 bits (103), Expect = 2.1e-04 Identity = 24/50 (48.00%), Postives = 31/50 (62.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|