Csor.00g076220 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTAAGGAGGTTTACACCAGGGAAGAGTTGCTTGCGCTGTTGCAGGTTTTTGGATTTGTCGCTCTTTTTGTTCTATTTTTTTCAATTTCGATTGATTAAGTTTTAGTATTCGTGCTGTACTTCGGAGAATAGGTTTCTTCTCTCGTGATTGAATGTTAGAGACCTGTGGTTGAGTTTTTGTTGAACTCTGCTGATTCTTCTGGTTTTGAGATTGACGTCATAATTTACTTGCTTGGAGTAGCGCTGATAACAGAGTTGCAGACGTTTACTTTTGTTTCTATCGAAATTTATAGTCCGTGTACTGCCGCTAGATTATGGAGTGTGCTTCTTTGCTTAATTATCTGTCGTTACCGATTGAATTCAGATGATGATTATATATGTGTTTGTTTTTTTTTTTTTTCCCCTTCTTTTTGTCTCATTTTCGCTCGCTAATGCAATTAAGAATGCTCTGTAGGATCTTCAAATTGATTTCGCCAAGTACGAACATCCAGCTGTAATGACAGTTGAAGCTCAGGTAATTCTGTATGAAACAAACGAATGAAATCATCCTTGTCATTCTATTGTTAATTCTTTTATATATAAGTTAACGGAAGCATGTTTTTTCGAATCTTCATCAGGCAAAATATGTTGGAAATTTGGGGGGTGGTATCAGTAAGAATCTGTTTTTGAAGGTAGACTTCTGAACAAACTGTTCCTGCCCCATAATTCTAGTTATTAGAGTATTGCATTCTATATTACAACGTATGGTTTAACATCTGCAATGTTTTCCGCGCATTGGCAGGACAAAAAGAATAGATACTATGTAGTTTCAGCATTGGCACAGACCAAAGTAGACCTGAAAGGTCTGTACATTTTACTAATGGCTGTGATTTGTTTTTAAAATTTTTCTTATGAAGGGTCAATCTTGGTCCGTTAATGTCCGTTGATGATGGGTTTCTTGAAGATACAATGTCTATGATCATGTATTTATAGTGTGATGTGATTCACGGTCAGTTTTAGTCATGCAGTTCTATCTGCAAGACTTGGTTTGGGGAAAGGAGGTCTGAGAATGGCTCCCGAGGAAGCGTTGGGAGAGAAACTTAAGGTTAGAAATAGCCATTTCAGGGATTTCACACTTAAATAATTCTTTACTTCGTTGTGTTGGATCTTTCATGGGCTCTTTTTTTTTTTATTATTTTTTTTTTTTTATAAATTTTTTATTATCAAATTGGACAGTGCCGATGCCATAATTCTTTGTTTTCACCTGCCTTGTTTTATTAGCAATGATCTTATGGTCATGGAAGCATGTGTAATAAACCAGCTTAGTGGTCACTCAATTTTTTTTTTTTTTTTATTGCCTTTTACATTAATGTGAATGTGTTTTCTAACTAAGTAGTTATCGTGATTGTTTTTAAATTTCAAGGTAGACTGCATGTGTGAAATTGCAGTCAAATTCAATTAAGAATATCTGATTTAAATGAAGATTAAGCATTTTAACATTGTTGAGGAGGTTAAAGGTGTGAAGCGTATGAGGTATATGCCTCAGTTTAATTAAAAGACACCAATGTAACTCATATAAGTATAACATTCAGTATTACTGAAATGAAATGATTGCATAAATGTGTGTGTGTCTGTATTTAATATTCTTTAATTGTCTTCTGTTTTTTTAGAACTATTGGGGTAAAAGCACAAACGGTCTGTAATAGTACAACTTATGGTGTATTAGCAATAAATACTGTAGAGACTTCTGATATTTTGGAGAATAAATTACGAATTAGTATTATTCTTCAGCCACTTTATCAGAAGTAAAGACTAAGTTTTAGTTCATTCTCAGGCATGAAACAAGGGATATTAACTTACAAGTAATCACCAATATCTAATTATCCTAAAAAGTTACAGTTTTGGTTCAACTATTTAATTATTTGCAAAAAGTCATCGGCATCAGAGAAATAGATGCTGGGAACCCTAAAGGAATCGATGAATCGCAATATCCTTGTTGAAACATGATGTGTGAAGTTAATTCGTTTATTTAGTCGTGTCATTTTGGCATGGCTCTAAAGATTTCTACTGCATAAGTTACTTTCTCTTGCACCAATTAATTGATGCCATTCAATTTATGCTAGTTATGCAGAGGTGATGATATTTCAATTGTACAGTTCTAGATTCTTATTCAGATGGCTGACATGTGATTACTTATATCTTTATTTTCATTTGTTGCTCAGGTGTCGTTGGGTTGTGTTACTCCATTTGCACTCATCAATAAAACAGCACGGTAATGTATTAATATACTCCTTGGCCGTGAATTTTATTTTCACGCATCTATCAACAGTTTACCCAAATTTTGTTCTTTCACTTTCAGTAGCTATCTATGTTTTGTTGCTGTTTGGTATGTTGCTAGGAAATCTTTTAGAAATTTATGTAACTAAGACTTGGACAATACTTGGAACATTTACCTAATGTGCAATCCTCCGGTGGTGGAAGGAAGAGCTAACCTTTCCTAACAGTTGGACCTGGAAAGTCGGATTGTTTGAATAATATAAGGCAGCATATTATATTTTTCTATTTTATTTGTGTTCATTAACTATGGCTGAATGAACCATCAATTTTTTTTTATATTTTGCTCAAAGTTATTATTTTGTGTTATTGTTAACTCTTTCCTTGTGCAGAGATGTTGCTTTATTGTTAGACCATGGATTTAAAAGCCAGGAATTCTGCTTCTTCCACCCTTTGTCAAATGAAACATCAATATGTATGTGAGGCACACTTTCGCTTATTTACTCTTTGCCTTTATTCACCTTGCGATGCATATGTTGCTGAGGTTTCAGATTTCTAACAGTCCAAACCTGACTTTCAATGTTGTTATGTACTTTACCCTTGCCAAATGTTGTTATTCTGTGTTTCACTCTTCATTTTGATGGCTGCTTTCATTTAATTGGATTTGGTGGCTGTCTCTGTTAACCACGCATTCCTCCCACATATATCTTGCTCTATACCTGTGGAAGTGAAAACTTGTTTTTATTATAGAAAAGTTTTTCCATGTTTATCTGACATGATAAAGCAATCTTGGTCTTGCATACGCGTGGATTAATCAGTAGAACTTTGCCTGATCTTTTATAAGTTAGACTCTAATTCTCTTTATATATTTATGTCTCCAGCTCTTAATACCACTAATCTCGACAAGTTCCTTAAATCAATTGGGAGAGACCCTTCATACATTGACTTGGAGGTGAATCCATATCTGGTAACCATTGAGATGATCCAAAAAGTTTATTATTTGTTGATTTTTATTCTTTCTCTGCAGGCTAATCCTTCTGTAGGAAAGGATCAACCCCCCGATCTTGCTGGGCTTGTTCCTTCTGGATCTGCTTTTGTGCCCGATACTCCAGAGAAAACATCTTCATGTCCTGGTTCAAATGAAAATCAAGGTGTTGCGGACAAAAAGTCTAAGGCAGCTGCAGGTAGTTTATTGAGCTTATACTTATGTAGGACAAAAAGATAGGGGAGACAAATTAGTATAGGTGATAAAATTGTACGTGGATGTTATTGCTTCAGCTTCAGGACTTACGGATTAGACTAACTAAATGTTAGGTTGTATAGGGTTTTCAAGTTTTGTCTGCTATATTAGTTAAGAATAAGATAAATGCATTGATTCATTCTGATTTTGCACTTAAGGAAAATAAAATACTTCACAATGCCTGGTAGTTTATTAATCACGATGATTGGACGGGTTGTTCTCTTCCCCCGTCCTCATTTAGGAACTCAATCACAATATAGCATCCCTGAATGATCTTCTCTTTGCTAAAGTAACGAGTCTCTCTCTTTAAAATAGTGAAGCCATCTTCTGCTGTGAAAGCTGGAAAGGACAAAGCCGTACCAAAAGCACGACCATCCTACGCGAATGTGGAGAAATTTGTCGAAGAGATTCTTGATAAGACATCAGCAATAGTGCTTTCAGAGGTTATAACACTGTTCTTGGCATTAGTATACACTTAGTCCAAACTTGTTCTGAACTGACAGAACCAATTTTGACAGCTCACAGAGGAGACTGTTAAAAAACATGGAGAACAGTTGGGAGATGTGGTGTCAAACAGCATTAAGAAACATCTTAGCTCGGAGTTGAACAATCTTTCTGTGAGTATTTTTCTTGGTTATTTTTTTTATTTGCTTCTTTGGGAGCAACGAAAAACAACTTTAAGAGCCATGCACACTTGCCGTTTCAAAGTTTAAAATATTTGTATTGTTTACAGATCTTTCGATTTTGAGTCAAGTGGTTATAAATTTAGTATGGTTTGTGATTTATCTATGATTGCAGATGATATTTAAGAACAATGCATACACAGAAGGGTTCCATGCTGGATCTTCCCATAAAGTGAAGCATGCGTGCTGA ATGGCTAAGGAGGTTTACACCAGGGAAGAGTTGCTTGCGCTGTTGCAGGATCTTCAAATTGATTTCGCCAAGTACGAACATCCAGCTGTAATGACAGTTGAAGCTCAGGCAAAATATGTTGGAAATTTGGGGGGTGGTATCAGTAAGAATCTGTTTTTGAAGGACAAAAAGAATAGATACTATGTAGTTTCAGCATTGGCACAGACCAAAGTAGACCTGAAAGTTCTATCTGCAAGACTTGGTTTGGGGAAAGGAGGTCTGAGAATGGCTCCCGAGGAAGCGTTGGGAGAGAAACTTAAGGTGTCGTTGGGTTGTGTTACTCCATTTGCACTCATCAATAAAACAGCACGAGATGTTGCTTTATTGTTAGACCATGGATTTAAAAGCCAGGAATTCTGCTTCTTCCACCCTTTGTCAAATGAAACATCAATATCTCTTAATACCACTAATCTCGACAAGTTCCTTAAATCAATTGGGAGAGACCCTTCATACATTGACTTGGAGGCTAATCCTTCTGTAGGAAAGGATCAACCCCCCGATCTTGCTGGGCTTGTTCCTTCTGGATCTGCTTTTGTGCCCGATACTCCAGAGAAAACATCTTCATGTCCTGGTTCAAATGAAAATCAAGGTGTTGCGGACAAAAAGTCTAAGGCAGCTGCAGTGAAGCCATCTTCTGCTGTGAAAGCTGGAAAGGACAAAGCCGTACCAAAAGCACGACCATCCTACGCGAATGTGGAGAAATTTGTCGAAGAGATTCTTGATAAGACATCAGCAATAGTGCTTTCAGAGCTCACAGAGGAGACTGTTAAAAAACATGGAGAACAGTTGGGAGATGTGGTGTCAAACAGCATTAAGAAACATCTTAGCTCGGAGTTGAACAATCTTTCTATGATATTTAAGAACAATGCATACACAGAAGGGTTCCATGCTGGATCTTCCCATAAAGTGAAGCATGCGTGCTGA ATGGCTAAGGAGGTTTACACCAGGGAAGAGTTGCTTGCGCTGTTGCAGGATCTTCAAATTGATTTCGCCAAGTACGAACATCCAGCTGTAATGACAGTTGAAGCTCAGGCAAAATATGTTGGAAATTTGGGGGGTGGTATCAGTAAGAATCTGTTTTTGAAGGACAAAAAGAATAGATACTATGTAGTTTCAGCATTGGCACAGACCAAAGTAGACCTGAAAGTTCTATCTGCAAGACTTGGTTTGGGGAAAGGAGGTCTGAGAATGGCTCCCGAGGAAGCGTTGGGAGAGAAACTTAAGGTGTCGTTGGGTTGTGTTACTCCATTTGCACTCATCAATAAAACAGCACGAGATGTTGCTTTATTGTTAGACCATGGATTTAAAAGCCAGGAATTCTGCTTCTTCCACCCTTTGTCAAATGAAACATCAATATCTCTTAATACCACTAATCTCGACAAGTTCCTTAAATCAATTGGGAGAGACCCTTCATACATTGACTTGGAGGCTAATCCTTCTGTAGGAAAGGATCAACCCCCCGATCTTGCTGGGCTTGTTCCTTCTGGATCTGCTTTTGTGCCCGATACTCCAGAGAAAACATCTTCATGTCCTGGTTCAAATGAAAATCAAGGTGTTGCGGACAAAAAGTCTAAGGCAGCTGCAGTGAAGCCATCTTCTGCTGTGAAAGCTGGAAAGGACAAAGCCGTACCAAAAGCACGACCATCCTACGCGAATGTGGAGAAATTTGTCGAAGAGATTCTTGATAAGACATCAGCAATAGTGCTTTCAGAGCTCACAGAGGAGACTGTTAAAAAACATGGAGAACAGTTGGGAGATGTGGTGTCAAACAGCATTAAGAAACATCTTAGCTCGGAGTTGAACAATCTTTCTATGATATTTAAGAACAATGCATACACAGAAGGGTTCCATGCTGGATCTTCCCATAAAGTGAAGCATGCGTGCTGA MAKEVYTREELLALLQDLQIDFAKYEHPAVMTVEAQAKYVGNLGGGISKNLFLKDKKNRYYVVSALAQTKVDLKVLSARLGLGKGGLRMAPEEALGEKLKVSLGCVTPFALINKTARDVALLLDHGFKSQEFCFFHPLSNETSISLNTTNLDKFLKSIGRDPSYIDLEANPSVGKDQPPDLAGLVPSGSAFVPDTPEKTSSCPGSNENQGVADKKSKAAAVKPSSAVKAGKDKAVPKARPSYANVEKFVEEILDKTSAIVLSELTEETVKKHGEQLGDVVSNSIKKHLSSELNNLSMIFKNNAYTEGFHAGSSHKVKHAC Homology
BLAST of Csor.00g076220 vs. ExPASy Swiss-Prot
Match: Q6NRL0 (Prolyl-tRNA synthetase associated domain-containing protein 1 OS=Xenopus laevis OX=8355 GN=prorsd1p PE=2 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 6.3e-25 Identity = 71/164 (43.29%), Postives = 92/164 (56.10%), Query Frame = 0
BLAST of Csor.00g076220 vs. ExPASy Swiss-Prot
Match: A1A4Q2 (Prolyl-tRNA synthetase associated domain-containing protein 1 OS=Bos taurus OX=9913 GN=PRORSD1 PE=2 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 3.5e-23 Identity = 66/166 (39.76%), Postives = 93/166 (56.02%), Query Frame = 0
BLAST of Csor.00g076220 vs. ExPASy Swiss-Prot
Match: A6NEY8 (Putative prolyl-tRNA synthetase associated domain-containing protein 1 OS=Homo sapiens OX=9606 GN=PRORSD1P PE=5 SV=3) HSP 1 Score: 108.2 bits (269), Expect = 1.7e-22 Identity = 60/146 (41.10%), Postives = 86/146 (58.90%), Query Frame = 0
BLAST of Csor.00g076220 vs. ExPASy Swiss-Prot
Match: Q9D820 (Prolyl-tRNA synthetase associated domain-containing protein 1 OS=Mus musculus OX=10090 GN=Prorsd1 PE=1 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 2.9e-22 Identity = 64/164 (39.02%), Postives = 92/164 (56.10%), Query Frame = 0
BLAST of Csor.00g076220 vs. ExPASy Swiss-Prot
Match: Q6PFS2 (Prolyl-tRNA synthetase associated domain-containing protein 1 OS=Danio rerio OX=7955 GN=Prorsd1 PE=2 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 7.2e-21 Identity = 64/165 (38.79%), Postives = 88/165 (53.33%), Query Frame = 0
BLAST of Csor.00g076220 vs. NCBI nr
Match: KAG6608051.1 (Prolyl-tRNA synthetase associated domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031680.1 Prolyl-tRNA synthetase associated domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 616 bits (1589), Expect = 4.05e-222 Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0
BLAST of Csor.00g076220 vs. NCBI nr
Match: XP_022941394.1 (prolyl-tRNA synthetase associated domain-containing protein 1 [Cucurbita moschata]) HSP 1 Score: 612 bits (1578), Expect = 1.93e-220 Identity = 318/320 (99.38%), Postives = 319/320 (99.69%), Query Frame = 0
BLAST of Csor.00g076220 vs. NCBI nr
Match: XP_023525795.1 (prolyl-tRNA synthetase associated domain-containing protein 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 612 bits (1578), Expect = 1.93e-220 Identity = 318/320 (99.38%), Postives = 319/320 (99.69%), Query Frame = 0
BLAST of Csor.00g076220 vs. NCBI nr
Match: XP_022981029.1 (prolyl-tRNA synthetase associated domain-containing protein 1 [Cucurbita maxima]) HSP 1 Score: 604 bits (1557), Expect = 3.06e-217 Identity = 312/320 (97.50%), Postives = 317/320 (99.06%), Query Frame = 0
BLAST of Csor.00g076220 vs. NCBI nr
Match: XP_038898012.1 (prolyl-tRNA synthetase associated domain-containing protein 1 [Benincasa hispida]) HSP 1 Score: 552 bits (1422), Expect = 1.27e-196 Identity = 288/323 (89.16%), Postives = 301/323 (93.19%), Query Frame = 0
BLAST of Csor.00g076220 vs. ExPASy TrEMBL
Match: A0A6J1FN76 (prolyl-tRNA synthetase associated domain-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111446698 PE=3 SV=1) HSP 1 Score: 612 bits (1578), Expect = 9.33e-221 Identity = 318/320 (99.38%), Postives = 319/320 (99.69%), Query Frame = 0
BLAST of Csor.00g076220 vs. ExPASy TrEMBL
Match: A0A6J1J0V9 (prolyl-tRNA synthetase associated domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111480300 PE=3 SV=1) HSP 1 Score: 604 bits (1557), Expect = 1.48e-217 Identity = 312/320 (97.50%), Postives = 317/320 (99.06%), Query Frame = 0
BLAST of Csor.00g076220 vs. ExPASy TrEMBL
Match: A0A1S3BAG3 (prolyl-tRNA synthetase associated domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC103487573 PE=3 SV=1) HSP 1 Score: 549 bits (1414), Expect = 1.02e-195 Identity = 283/323 (87.62%), Postives = 298/323 (92.26%), Query Frame = 0
BLAST of Csor.00g076220 vs. ExPASy TrEMBL
Match: A0A0A0KYL1 (tRNA_edit domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G370560 PE=3 SV=1) HSP 1 Score: 542 bits (1397), Expect = 4.87e-192 Identity = 279/323 (86.38%), Postives = 296/323 (91.64%), Query Frame = 0
BLAST of Csor.00g076220 vs. ExPASy TrEMBL
Match: A0A6J1CAT2 (uncharacterized protein LOC111009964 OS=Momordica charantia OX=3673 GN=LOC111009964 PE=3 SV=1) HSP 1 Score: 538 bits (1386), Expect = 1.95e-191 Identity = 284/324 (87.65%), Postives = 296/324 (91.36%), Query Frame = 0
BLAST of Csor.00g076220 vs. TAIR 10
Match: AT1G44835.1 (YbaK/aminoacyl-tRNA synthetase-associated domain ) HSP 1 Score: 343.2 bits (879), Expect = 2.3e-94 Identity = 185/314 (58.92%), Postives = 237/314 (75.48%), Query Frame = 0
BLAST of Csor.00g076220 vs. TAIR 10
Match: AT1G44835.2 (YbaK/aminoacyl-tRNA synthetase-associated domain ) HSP 1 Score: 342.4 bits (877), Expect = 3.8e-94 Identity = 185/314 (58.92%), Postives = 240/314 (76.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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