Csor.00g075200 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g075200
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	ethylene-responsive transcription factor SHINE 2-like
Location	Csor_Chr01: 11907407 .. 11908071 (-)
RNA-Seq Expression	Csor.00g075200
Synteny	Csor.00g075200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTGTCTGGTGCCCATAACCTGTTTGTTGATATGCCTGAAAGAAGCTGAGCGGCCATGGCGTTGGCATGCGTATCTATGTGTTCTTGGTTGTGATTTGGAACTACATTACATCATGAGCGCACATCCTTATATTGTTCATGTGTTTTTCTTTGTAGGAAAAGAAGGGTGTGGCTAGGGACATTCGACACCGCAGAGGATGCAGCACGAGCATATGATCAAGCATCCATCTTGATGAACGGCCAAAACGCCAAGACCAATTTCCCTGCATCGAAAGACCGATCTGAAGAAGCCAGCCATGGCCATGGGGCTTCTCCATTGTCCCCAAAAGCACTTTCAGAGCTACTCAGCACAAAGCTCAGGAAGTGCTGCAAGAACCCTTCTCCCTCCTTGACATGCCTGCGACTCGACAGTGACAATGCCCACATCGGCGTCTGGCAGAAGCGTGCAGGCACTCGAGCAGCCTCCGATTGGGTCATGAGGATTGAGTTAGGAAAGAAGGAGACACCGTCGCCGTCGATGTCCCTGTCCCCATTGCCCGAACCTGCAAGCCAGGAAGCTGAAGGCCGCCAAAATGGGATTGATGAAGAAGACAGAATTGCAATGCAAATGATCGAAGAGTTGCTGAGTTGGAACTGCCCTCTTCCTTCAACTTCAAGCTAG

mRNA sequence

ATGTTTTGTCTGGTGCCCATAACCTGTTTGTTGATATGCCTGAAAGAAGCTGAGCGGCCATGGCGTTGGCATGCGAAAAGAAGGGTGTGGCTAGGGACATTCGACACCGCAGAGGATGCAGCACGAGCATATGATCAAGCATCCATCTTGATGAACGGCCAAAACGCCAAGACCAATTTCCCTGCATCGAAAGACCGATCTGAAGAAGCCAGCCATGGCCATGGGGCTTCTCCATTGTCCCCAAAAGCACTTTCAGAGCTACTCAGCACAAAGCTCAGGAAGTGCTGCAAGAACCCTTCTCCCTCCTTGACATGCCTGCGACTCGACAGTGACAATGCCCACATCGGCGTCTGGCAGAAGCGTGCAGGCACTCGAGCAGCCTCCGATTGGGTCATGAGGATTGAGTTAGGAAAGAAGGAGACACCGTCGCCGTCGATGTCCCTGTCCCCATTGCCCGAACCTGCAAGCCAGGAAGCTGAAGGCCGCCAAAATGGGATTGATGAAGAAGACAGAATTGCAATGCAAATGATCGAAGAGTTGCTGAGTTGGAACTGCCCTCTTCCTTCAACTTCAAGCTAG

Coding sequence (CDS)

ATGTTTTGTCTGGTGCCCATAACCTGTTTGTTGATATGCCTGAAAGAAGCTGAGCGGCCATGGCGTTGGCATGCGAAAAGAAGGGTGTGGCTAGGGACATTCGACACCGCAGAGGATGCAGCACGAGCATATGATCAAGCATCCATCTTGATGAACGGCCAAAACGCCAAGACCAATTTCCCTGCATCGAAAGACCGATCTGAAGAAGCCAGCCATGGCCATGGGGCTTCTCCATTGTCCCCAAAAGCACTTTCAGAGCTACTCAGCACAAAGCTCAGGAAGTGCTGCAAGAACCCTTCTCCCTCCTTGACATGCCTGCGACTCGACAGTGACAATGCCCACATCGGCGTCTGGCAGAAGCGTGCAGGCACTCGAGCAGCCTCCGATTGGGTCATGAGGATTGAGTTAGGAAAGAAGGAGACACCGTCGCCGTCGATGTCCCTGTCCCCATTGCCCGAACCTGCAAGCCAGGAAGCTGAAGGCCGCCAAAATGGGATTGATGAAGAAGACAGAATTGCAATGCAAATGATCGAAGAGTTGCTGAGTTGGAACTGCCCTCTTCCTTCAACTTCAAGCTAG

Protein sequence

MFCLVPITCLLICLKEAERPWRWHAKRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHGASPLSPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETPSPSMSLSPLPEPASQEAEGRQNGIDEEDRIAMQMIEELLSWNCPLPSTSS

Homology

[Close]

BLAST of Csor.00g075200 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.2e-42
Identity = 89/161 (55.28%), Postives = 115/161 (71.43%), Query Frame = 0


Query: 26  KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHGASPLSPKALS 85
           KRRVWLGTFDTAE AARAYDQA++LMNGQ+AKTNFP  K     +   + A   SPK+LS
Sbjct: 28  KRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPVIKSNGSNSLEINSAL-RSPKSLS 87

Query: 86  ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETPSPS 145
           ELL+ KLRK CK+ +P LTCLRLD+D++HIGVWQKRAG++ + +WV  +ELG K    P 
Sbjct: 88  ELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAGSKTSPNWVKLVELGDKVNARPG 147

Query: 146 MSLSPLPEPASQEAEGRQNGIDEEDRIAMQMIEELLSWNCP 187
             +       + + + R   + E+D++AMQMIEELL+W CP
Sbjct: 148 GDIE------TNKMKVRNEDVQEDDQMAMQMIEELLNWTCP 181

[Close]

BLAST of Csor.00g075200 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 7.6e-42
Identity = 93/162 (57.41%), Postives = 119/162 (73.46%), Query Frame = 0


Query: 26  KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHGASPL-SPKAL 85
           KRRVWLGTF+TAE AARAYDQA++LMNGQNAKTNFP  K            SPL SPK+L
Sbjct: 28  KRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPVVKSEEGSDHVKDVNSPLMSPKSL 87

Query: 86  SELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETPSP 145
           SELL+ KLRK CK+ +PSLTCLRLD+D++HIGVWQKRAG++ +  WVMR+ELG     S 
Sbjct: 88  SELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGVWQKRAGSKTSPTWVMRLELGNVVNESA 147

Query: 146 -SMSLSPL-PEPASQEAEGRQNGIDEEDRIAMQMIEELLSWN 185
             + L+ +  +   +E E  +  I +ED++AM+MIEELL+W+
Sbjct: 148 VDLGLTTMNKQNVEKEEEEEEAIISDEDQLAMEMIEELLNWS 189

[Close]

BLAST of Csor.00g075200 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.3e-41
Identity = 91/172 (52.91%), Postives = 123/172 (71.51%), Query Frame = 0


Query: 26  KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHG--------AS 85
           KRR+WLGTF+TAE+AARAYD+A++LM+G+NAKTNFP + + + E S G          +S
Sbjct: 28  KRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPLNNNNTGETSEGKTDISASSTMSS 87

Query: 86  PLSPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELG 145
             S  +LS +LS KLRKCCK+PSPSLTCLRLD+ ++HIGVWQKRAG+++ S WVM +ELG
Sbjct: 88  STSSSSLSSILSAKLRKCCKSPSPSLTCLRLDTASSHIGVWQKRAGSKSDSSWVMTVELG 147

Query: 146 ----KKETPSPSMSLSPLPEPASQEAEG-RQNGIDEEDRIAMQMIEELLSWN 185
                +ET S +   + L      E  G R+  +DEE+++A+QMIEELL+ N
Sbjct: 148 PASSSQETTSKASQDAILAPTTEVEIGGSREEVLDEEEKVALQMIEELLNTN 199

[Close]

BLAST of Csor.00g075200 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.9e-09
Identity = 37/71 (52.11%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 26 KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHGASPL-SPKAL 85
          K R+WLGTF+TAEDAARAYD+A+ LM G  A+TNFP          +   A P  S K L
Sbjct: 29 KTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFP----------YNPNAIPTSSSKLL 88

Query: 86 SELLSTKLRKC 96
          S  L+ KL KC
Sbjct: 89 SATLTAKLHKC 89

[Close]

BLAST of Csor.00g075200 vs. ExPASy Swiss-Prot
Match: Q9SXS8 (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.0e-09
Identity = 31/59 (52.54%), Postives = 37/59 (62.71%), Query Frame = 0


Query: 16 EAERPWRWHAKRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGH 75
          E   PW+   K RVWLGTFD+AEDAARAYD A+  + G  AKTNFP       + + GH
Sbjct: 42 EIRDPWK---KTRVWLGTFDSAEDAARAYDAAARALRGPKAKTNFPLPYAHHHQFNQGH 97

[Close]

BLAST of Csor.00g075200 vs. NCBI nr
Match: KAG6608153.1 (Ethylene-responsive transcription factor SHINE 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 391 bits (1005), Expect = 2.25e-137
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MFCLVPITCLLICLKEAERPWRWHAKRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNF 60
           MFCLVPITCLLICLKEAERPWRWHAKRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNF
Sbjct: 1   MFCLVPITCLLICLKEAERPWRWHAKRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNF 60

Query: 61  PASKDRSEEASHGHGASPLSPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQK 120
           PASKDRSEEASHGHGASPLSPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQK
Sbjct: 61  PASKDRSEEASHGHGASPLSPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQK 120

Query: 121 RAGTRAASDWVMRIELGKKETPSPSMSLSPLPEPASQEAEGRQNGIDEEDRIAMQMIEEL 180
           RAGTRAASDWVMRIELGKKETPSPSMSLSPLPEPASQEAEGRQNGIDEEDRIAMQMIEEL
Sbjct: 121 RAGTRAASDWVMRIELGKKETPSPSMSLSPLPEPASQEAEGRQNGIDEEDRIAMQMIEEL 180

Query: 181 LSWNCPLPSTSS 192
           LSWNCPLPSTSS
Sbjct: 181 LSWNCPLPSTSS 192

[Close]

BLAST of Csor.00g075200 vs. NCBI nr
Match: KAG7031792.1 (Ethylene-responsive transcription factor SHINE 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 335 bits (858), Expect = 6.24e-115
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 26  KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHGASPLSPKALS 85
           KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHGASPLSPKALS
Sbjct: 28  KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHGASPLSPKALS 87

Query: 86  ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETPSPS 145
           ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETPSPS
Sbjct: 88  ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETPSPS 147

Query: 146 MSLSPLPEPASQEAEGRQNGIDEEDRIAMQMIEELLSWNCPLPSTSS 192
           MSLSPLPEPASQEAEGRQNGIDEEDRIAMQMIEELLSWNCPLPSTSS
Sbjct: 148 MSLSPLPEPASQEAEGRQNGIDEEDRIAMQMIEELLSWNCPLPSTSS 194

[Close]

BLAST of Csor.00g075200 vs. NCBI nr
Match: XP_022940114.1 (ethylene-responsive transcription factor SHINE 3-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 333 bits (853), Expect = 1.45e-114
Identity = 166/167 (99.40%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 26  KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHGASPLSPKALS 85
           KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHGASPLSPKALS
Sbjct: 2   KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHGASPLSPKALS 61

Query: 86  ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETPSPS 145
           ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETP PS
Sbjct: 62  ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETPPPS 121

Query: 146 MSLSPLPEPASQEAEGRQNGIDEEDRIAMQMIEELLSWNCPLPSTSS 192
           MSLSPLPEPASQEAEGRQNGIDEEDRIAMQMIEELLSWNCPLPSTSS
Sbjct: 122 MSLSPLPEPASQEAEGRQNGIDEEDRIAMQMIEELLSWNCPLPSTSS 168

[Close]

BLAST of Csor.00g075200 vs. NCBI nr
Match: XP_022940113.1 (ethylene-responsive transcription factor SHINE 2-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 333 bits (853), Expect = 3.61e-114
Identity = 166/167 (99.40%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 26  KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHGASPLSPKALS 85
           KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHGASPLSPKALS
Sbjct: 28  KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHGASPLSPKALS 87

Query: 86  ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETPSPS 145
           ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETP PS
Sbjct: 88  ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETPPPS 147

Query: 146 MSLSPLPEPASQEAEGRQNGIDEEDRIAMQMIEELLSWNCPLPSTSS 192
           MSLSPLPEPASQEAEGRQNGIDEEDRIAMQMIEELLSWNCPLPSTSS
Sbjct: 148 MSLSPLPEPASQEAEGRQNGIDEEDRIAMQMIEELLSWNCPLPSTSS 194

[Close]

BLAST of Csor.00g075200 vs. NCBI nr
Match: XP_022981249.1 (ethylene-responsive transcription factor SHINE 3-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 328 bits (840), Expect = 1.39e-112
Identity = 164/167 (98.20%), Postives = 164/167 (98.20%), Query Frame = 0


Query: 26  KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHGASPLSPKALS 85
           KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGH ASPLSPK LS
Sbjct: 2   KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHSASPLSPKTLS 61

Query: 86  ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETPSPS 145
           ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETPSPS
Sbjct: 62  ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETPSPS 121

Query: 146 MSLSPLPEPASQEAEGRQNGIDEEDRIAMQMIEELLSWNCPLPSTSS 192
           MSLSPLPEPASQEAEG QNGIDEEDRIAMQMIEELLSWNCPLPSTSS
Sbjct: 122 MSLSPLPEPASQEAEGCQNGIDEEDRIAMQMIEELLSWNCPLPSTSS 168

[Close]

BLAST of Csor.00g075200 vs. ExPASy TrEMBL
Match: A0A6J1FJ45 (ethylene-responsive transcription factor SHINE 3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445833 PE=4 SV=1)

HSP 1 Score: 333 bits (853), Expect = 7.03e-115
Identity = 166/167 (99.40%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 26  KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHGASPLSPKALS 85
           KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHGASPLSPKALS
Sbjct: 2   KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHGASPLSPKALS 61

Query: 86  ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETPSPS 145
           ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETP PS
Sbjct: 62  ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETPPPS 121

Query: 146 MSLSPLPEPASQEAEGRQNGIDEEDRIAMQMIEELLSWNCPLPSTSS 192
           MSLSPLPEPASQEAEGRQNGIDEEDRIAMQMIEELLSWNCPLPSTSS
Sbjct: 122 MSLSPLPEPASQEAEGRQNGIDEEDRIAMQMIEELLSWNCPLPSTSS 168

[Close]

BLAST of Csor.00g075200 vs. ExPASy TrEMBL
Match: A0A6J1FNE0 (ethylene-responsive transcription factor SHINE 2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445833 PE=4 SV=1)

HSP 1 Score: 333 bits (853), Expect = 1.75e-114
Identity = 166/167 (99.40%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 26  KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHGASPLSPKALS 85
           KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHGASPLSPKALS
Sbjct: 28  KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHGASPLSPKALS 87

Query: 86  ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETPSPS 145
           ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETP PS
Sbjct: 88  ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETPPPS 147

Query: 146 MSLSPLPEPASQEAEGRQNGIDEEDRIAMQMIEELLSWNCPLPSTSS 192
           MSLSPLPEPASQEAEGRQNGIDEEDRIAMQMIEELLSWNCPLPSTSS
Sbjct: 148 MSLSPLPEPASQEAEGRQNGIDEEDRIAMQMIEELLSWNCPLPSTSS 194

[Close]

BLAST of Csor.00g075200 vs. ExPASy TrEMBL
Match: A0A6J1J1D6 (ethylene-responsive transcription factor SHINE 3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480443 PE=4 SV=1)

HSP 1 Score: 328 bits (840), Expect = 6.74e-113
Identity = 164/167 (98.20%), Postives = 164/167 (98.20%), Query Frame = 0


Query: 26  KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHGASPLSPKALS 85
           KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGH ASPLSPK LS
Sbjct: 2   KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHSASPLSPKTLS 61

Query: 86  ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETPSPS 145
           ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETPSPS
Sbjct: 62  ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETPSPS 121

Query: 146 MSLSPLPEPASQEAEGRQNGIDEEDRIAMQMIEELLSWNCPLPSTSS 192
           MSLSPLPEPASQEAEG QNGIDEEDRIAMQMIEELLSWNCPLPSTSS
Sbjct: 122 MSLSPLPEPASQEAEGCQNGIDEEDRIAMQMIEELLSWNCPLPSTSS 168

[Close]

BLAST of Csor.00g075200 vs. ExPASy TrEMBL
Match: A0A6J1J1K6 (ethylene-responsive transcription factor SHINE 2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480443 PE=4 SV=1)

HSP 1 Score: 328 bits (840), Expect = 1.67e-112
Identity = 164/167 (98.20%), Postives = 164/167 (98.20%), Query Frame = 0


Query: 26  KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHGASPLSPKALS 85
           KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGH ASPLSPK LS
Sbjct: 28  KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHSASPLSPKTLS 87

Query: 86  ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETPSPS 145
           ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETPSPS
Sbjct: 88  ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETPSPS 147

Query: 146 MSLSPLPEPASQEAEGRQNGIDEEDRIAMQMIEELLSWNCPLPSTSS 192
           MSLSPLPEPASQEAEG QNGIDEEDRIAMQMIEELLSWNCPLPSTSS
Sbjct: 148 MSLSPLPEPASQEAEGCQNGIDEEDRIAMQMIEELLSWNCPLPSTSS 194

[Close]

BLAST of Csor.00g075200 vs. ExPASy TrEMBL
Match: A0A6J1FE08 (ethylene-responsive transcription factor SHINE 3 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111443124 PE=4 SV=1)

HSP 1 Score: 289 bits (739), Expect = 1.61e-97
Identity = 144/167 (86.23%), Postives = 153/167 (91.62%), Query Frame = 0


Query: 26  KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHGASPLSPKALS 85
           KRRVWLGTFDTAEDAARAYDQA+ILMNGQNAKTNFPASKD+S EASHGHG+SP++PKALS
Sbjct: 5   KRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALS 64

Query: 86  ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETPSPS 145
           ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRA S+WVMRIELGKKE PSP 
Sbjct: 65  ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPL 124

Query: 146 MSLSPLPEPASQEAEGRQNGIDEEDRIAMQMIEELLSWNCPLPSTSS 192
               P PE  SQE +G +NGIDEEDRIAMQMIEELL+WNCPLPS SS
Sbjct: 125 ----PSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS 167

[Close]

BLAST of Csor.00g075200 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 174.5 bits (441), Expect = 8.3e-44
Identity = 89/161 (55.28%), Postives = 115/161 (71.43%), Query Frame = 0


Query: 26  KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHGASPLSPKALS 85
           KRRVWLGTFDTAE AARAYDQA++LMNGQ+AKTNFP  K     +   + A   SPK+LS
Sbjct: 28  KRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPVIKSNGSNSLEINSAL-RSPKSLS 87

Query: 86  ELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETPSPS 145
           ELL+ KLRK CK+ +P LTCLRLD+D++HIGVWQKRAG++ + +WV  +ELG K    P 
Sbjct: 88  ELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAGSKTSPNWVKLVELGDKVNARPG 147

Query: 146 MSLSPLPEPASQEAEGRQNGIDEEDRIAMQMIEELLSWNCP 187
             +       + + + R   + E+D++AMQMIEELL+W CP
Sbjct: 148 GDIE------TNKMKVRNEDVQEDDQMAMQMIEELLNWTCP 181

[Close]

BLAST of Csor.00g075200 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 171.8 bits (434), Expect = 5.4e-43
Identity = 93/162 (57.41%), Postives = 119/162 (73.46%), Query Frame = 0


Query: 26  KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHGASPL-SPKAL 85
           KRRVWLGTF+TAE AARAYDQA++LMNGQNAKTNFP  K            SPL SPK+L
Sbjct: 28  KRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPVVKSEEGSDHVKDVNSPLMSPKSL 87

Query: 86  SELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETPSP 145
           SELL+ KLRK CK+ +PSLTCLRLD+D++HIGVWQKRAG++ +  WVMR+ELG     S 
Sbjct: 88  SELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGVWQKRAGSKTSPTWVMRLELGNVVNESA 147

Query: 146 -SMSLSPL-PEPASQEAEGRQNGIDEEDRIAMQMIEELLSWN 185
             + L+ +  +   +E E  +  I +ED++AM+MIEELL+W+
Sbjct: 148 VDLGLTTMNKQNVEKEEEEEEAIISDEDQLAMEMIEELLNWS 189

[Close]

BLAST of Csor.00g075200 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 171.0 bits (432), Expect = 9.2e-43
Identity = 91/172 (52.91%), Postives = 123/172 (71.51%), Query Frame = 0


Query: 26  KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHG--------AS 85
           KRR+WLGTF+TAE+AARAYD+A++LM+G+NAKTNFP + + + E S G          +S
Sbjct: 28  KRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPLNNNNTGETSEGKTDISASSTMSS 87

Query: 86  PLSPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELG 145
             S  +LS +LS KLRKCCK+PSPSLTCLRLD+ ++HIGVWQKRAG+++ S WVM +ELG
Sbjct: 88  STSSSSLSSILSAKLRKCCKSPSPSLTCLRLDTASSHIGVWQKRAGSKSDSSWVMTVELG 147

Query: 146 ----KKETPSPSMSLSPLPEPASQEAEG-RQNGIDEEDRIAMQMIEELLSWN 185
                +ET S +   + L      E  G R+  +DEE+++A+QMIEELL+ N
Sbjct: 148 PASSSQETTSKASQDAILAPTTEVEIGGSREEVLDEEEKVALQMIEELLNTN 199

[Close]

BLAST of Csor.00g075200 vs. TAIR 10
Match: AT5G25390.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 169.9 bits (429), Expect = 2.0e-42
Identity = 90/174 (51.72%), Postives = 119/174 (68.39%), Query Frame = 0


Query: 18  ERPW-RWHAKRR----VWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASH 77
           +R W  W ++ R    VWLGTFDTAE AARAYDQA++LMNGQ+AKTNFP  K     +  
Sbjct: 12  QRQWGSWVSEIRHPLLVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPVIKSNGSNSLE 71

Query: 78  GHGASPLSPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVM 137
            + A   SPK+LSELL+ KLRK CK+ +P LTCLRLD+D++HIGVWQKRAG++ + +WV 
Sbjct: 72  INSAL-RSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAGSKTSPNWVK 131

Query: 138 RIELGKKETPSPSMSLSPLPEPASQEAEGRQNGIDEEDRIAMQMIEELLSWNCP 187
            +ELG K    P   +       + + + R   + E+D++AMQMIEELL+W CP
Sbjct: 132 LVELGDKVNARPGGDIE------TNKMKVRNEDVQEDDQMAMQMIEELLNWTCP 178

[Close]

BLAST of Csor.00g075200 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 63.5 bits (153), Expect = 2.1e-10
Identity = 37/71 (52.11%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 26 KRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHGASPL-SPKAL 85
          K R+WLGTF+TAEDAARAYD+A+ LM G  A+TNFP          +   A P  S K L
Sbjct: 29 KTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFP----------YNPNAIPTSSSKLL 88

Query: 86 SELLSTKLRKC 96
          S  L+ KL KC
Sbjct: 89 SATLTAKLHKC 89

The following BLAST results are available for this feature:

BLAST of Csor.00g075200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3E958	1.2e-42	55.28	Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LFN7	7.6e-42	57.41	Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702...	[more]
Q9XI33	1.3e-41	52.91	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q94AW5	2.9e-09	52.11	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SXS8	5.0e-09	52.54	Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 ...	[more]

BLAST of Csor.00g075200 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6608153.1	2.25e-137	100.00	Ethylene-responsive transcription factor SHINE 3, partial [Cucurbita argyrosperm...	[more]
KAG7031792.1	6.24e-115	100.00	Ethylene-responsive transcription factor SHINE 3, partial [Cucurbita argyrosperm...	[more]
XP_022940114.1	1.45e-114	99.40	ethylene-responsive transcription factor SHINE 3-like isoform X2 [Cucurbita mosc...	[more]
XP_022940113.1	3.61e-114	99.40	ethylene-responsive transcription factor SHINE 2-like isoform X1 [Cucurbita mosc...	[more]
XP_022981249.1	1.39e-112	98.20	ethylene-responsive transcription factor SHINE 3-like isoform X2 [Cucurbita maxi...	[more]

BLAST of Csor.00g075200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FJ45	7.03e-115	99.40	ethylene-responsive transcription factor SHINE 3-like isoform X2 OS=Cucurbita mo...	[more]
A0A6J1FNE0	1.75e-114	99.40	ethylene-responsive transcription factor SHINE 2-like isoform X1 OS=Cucurbita mo...	[more]
A0A6J1J1D6	6.74e-113	98.20	ethylene-responsive transcription factor SHINE 3-like isoform X2 OS=Cucurbita ma...	[more]
A0A6J1J1K6	1.67e-112	98.20	ethylene-responsive transcription factor SHINE 2-like isoform X1 OS=Cucurbita ma...	[more]
A0A6J1FE08	1.61e-97	86.23	ethylene-responsive transcription factor SHINE 3 isoform X3 OS=Cucurbita moschat...	[more]

BLAST of Csor.00g075200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25390.2	8.3e-44	55.28	Integrase-type DNA-binding superfamily protein	[more]
AT5G11190.1	5.4e-43	57.41	Integrase-type DNA-binding superfamily protein	[more]
AT1G15360.1	9.2e-43	52.91	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.1	2.0e-42	51.72	Integrase-type DNA-binding superfamily protein	[more]
AT5G25190.1	2.1e-10	52.11	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 18..67 e-value: 3.6E-14 score: 63.1
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 24..53 e-value: 1.9E-6 score: 28.0
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 16..61 score: 12.878933
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 18..63 e-value: 8.28607E-20 score: 76.9267
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 16..63 e-value: 8.0E-16 score: 59.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..81
None	No IPR available	PANTHER	PTHR31194:SF13	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SHINE 2	coord: 26..190
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 26..190
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 22..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g075200.m01	Csor.00g075200.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity