Csor.00g074820 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAGGCGTTTGGGTTTTCCGATCAAACGGCGTGATGCGCCTCGTGGAAAACTCCCAAGCCGGCGGCAGCACCGGCACCGGCGCGGACTACTCCTCCGGCGGCGGCGGAAGAAAGAAGGTTCTGGTTCATCTTCCGTCGGGGCAGCCGGTTTGTTCTTACGGATTCCTTGAGAAGATTCTGGAAGGTTTAGGATGGGAGCGATATTACGAAGGCGATCCAGATTTGTTCCAGTTTCATAAGCTTTCTTCCATTGATCTAATTTCTCTTCCAATGGAGTTCTCCAAATTCAACTCCGTTTACATGTACGATCTCGTCGTCAAAAACCCTAACGTCTTCCACGTTCGAGAACCCTAA ATGTCAGGCGTTTGGGTTTTCCGATCAAACGGCGTGATGCGCCTCGTGGAAAACTCCCAAGCCGGCGGCAGCACCGGCACCGGCGCGGACTACTCCTCCGGCGGCGGCGGAAGAAAGAAGGTTCTGGTTCATCTTCCGTCGGGGCAGCCGGTTTGTTCTTACGGATTCCTTGAGAAGATTCTGGAAGGTTTAGGATGGGAGCGATATTACGAAGGCGATCCAGATTTGTTCCAGTTTCATAAGCTTTCTTCCATTGATCTAATTTCTCTTCCAATGGAGTTCTCCAAATTCAACTCCGTTTACATGTACGATCTCGTCGTCAAAAACCCTAACGTCTTCCACGTTCGAGAACCCTAA ATGTCAGGCGTTTGGGTTTTCCGATCAAACGGCGTGATGCGCCTCGTGGAAAACTCCCAAGCCGGCGGCAGCACCGGCACCGGCGCGGACTACTCCTCCGGCGGCGGCGGAAGAAAGAAGGTTCTGGTTCATCTTCCGTCGGGGCAGCCGGTTTGTTCTTACGGATTCCTTGAGAAGATTCTGGAAGGTTTAGGATGGGAGCGATATTACGAAGGCGATCCAGATTTGTTCCAGTTTCATAAGCTTTCTTCCATTGATCTAATTTCTCTTCCAATGGAGTTCTCCAAATTCAACTCCGTTTACATGTACGATCTCGTCGTCAAAAACCCTAACGTCTTCCACGTTCGAGAACCCTAA MSGVWVFRSNGVMRLVENSQAGGSTGTGADYSSGGGGRKKVLVHLPSGQPVCSYGFLEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVREP Homology
BLAST of Csor.00g074820 vs. ExPASy Swiss-Prot
Match: Q5Q0B3 (Flowering-promoting factor 1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FLP1 PE=2 SV=2) HSP 1 Score: 155.6 bits (392), Expect = 3.5e-37 Identity = 81/124 (65.32%), Postives = 93/124 (75.00%), Query Frame = 0
BLAST of Csor.00g074820 vs. ExPASy Swiss-Prot
Match: Q9LXB5 (Flowering-promoting factor 1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLP2 PE=2 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 1.9e-35 Identity = 75/117 (64.10%), Postives = 88/117 (75.21%), Query Frame = 0
BLAST of Csor.00g074820 vs. ExPASy Swiss-Prot
Match: O24340 (Flowering-promoting factor 1 OS=Sinapis alba OX=3728 GN=FPF1 PE=2 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 1.8e-33 Identity = 74/119 (62.18%), Postives = 92/119 (77.31%), Query Frame = 0
BLAST of Csor.00g074820 vs. ExPASy Swiss-Prot
Match: O23624 (Flowering-promoting factor 1 OS=Arabidopsis thaliana OX=3702 GN=FPF1 PE=1 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 2.3e-33 Identity = 74/118 (62.71%), Postives = 88/118 (74.58%), Query Frame = 0
BLAST of Csor.00g074820 vs. ExPASy Swiss-Prot
Match: Q9LGE3 (Flowering-promoting factor 1-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RAA1 PE=1 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 9.1e-30 Identity = 71/115 (61.74%), Postives = 80/115 (69.57%), Query Frame = 0
BLAST of Csor.00g074820 vs. NCBI nr
Match: KAG6608191.1 (Flowering-promoting factor 1-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 244 bits (622), Expect = 2.19e-81 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of Csor.00g074820 vs. NCBI nr
Match: XP_022940479.1 (flowering-promoting factor 1-like protein 2 [Cucurbita moschata] >KAG7037549.1 Flowering-promoting factor 1-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 242 bits (618), Expect = 8.93e-81 Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0
BLAST of Csor.00g074820 vs. NCBI nr
Match: XP_022982497.1 (flowering-promoting factor 1-like protein 2 [Cucurbita maxima]) HSP 1 Score: 230 bits (586), Expect = 8.29e-76 Identity = 114/124 (91.94%), Postives = 115/124 (92.74%), Query Frame = 0
BLAST of Csor.00g074820 vs. NCBI nr
Match: XP_023524426.1 (flowering-promoting factor 1-like protein 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 226 bits (576), Expect = 2.60e-74 Identity = 114/122 (93.44%), Postives = 115/122 (94.26%), Query Frame = 0
BLAST of Csor.00g074820 vs. NCBI nr
Match: XP_004136318.1 (flowering-promoting factor 1-like protein 2 [Cucumis sativus] >KGN60157.1 hypothetical protein Csa_002053 [Cucumis sativus]) HSP 1 Score: 207 bits (528), Expect = 5.62e-67 Identity = 103/123 (83.74%), Postives = 109/123 (88.62%), Query Frame = 0
BLAST of Csor.00g074820 vs. ExPASy TrEMBL
Match: A0A6J1FKC3 (flowering-promoting factor 1-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111446065 PE=3 SV=1) HSP 1 Score: 242 bits (618), Expect = 4.32e-81 Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0
BLAST of Csor.00g074820 vs. ExPASy TrEMBL
Match: A0A6J1IWR8 (flowering-promoting factor 1-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111481300 PE=3 SV=1) HSP 1 Score: 230 bits (586), Expect = 4.01e-76 Identity = 114/124 (91.94%), Postives = 115/124 (92.74%), Query Frame = 0
BLAST of Csor.00g074820 vs. ExPASy TrEMBL
Match: A0A0A0LHE6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881700 PE=3 SV=1) HSP 1 Score: 207 bits (528), Expect = 2.72e-67 Identity = 103/123 (83.74%), Postives = 109/123 (88.62%), Query Frame = 0
BLAST of Csor.00g074820 vs. ExPASy TrEMBL
Match: A0A6J1IMX4 (flowering-promoting factor 1-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111476674 PE=3 SV=1) HSP 1 Score: 206 bits (525), Expect = 6.86e-67 Identity = 100/119 (84.03%), Postives = 107/119 (89.92%), Query Frame = 0
BLAST of Csor.00g074820 vs. ExPASy TrEMBL
Match: A0A5A7UF14 (Flowering-promoting factor 1-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64983G00010 PE=3 SV=1) HSP 1 Score: 206 bits (525), Expect = 9.49e-67 Identity = 106/135 (78.52%), Postives = 109/135 (80.74%), Query Frame = 0
BLAST of Csor.00g074820 vs. TAIR 10
Match: AT4G31380.1 (FPF1-like protein 1 ) HSP 1 Score: 155.6 bits (392), Expect = 2.5e-38 Identity = 81/124 (65.32%), Postives = 93/124 (75.00%), Query Frame = 0
BLAST of Csor.00g074820 vs. TAIR 10
Match: AT5G10625.1 (BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 149.8 bits (377), Expect = 1.3e-36 Identity = 75/117 (64.10%), Postives = 88/117 (75.21%), Query Frame = 0
BLAST of Csor.00g074820 vs. TAIR 10
Match: AT5G24860.1 (flowering promoting factor 1 ) HSP 1 Score: 142.9 bits (359), Expect = 1.6e-34 Identity = 74/118 (62.71%), Postives = 88/118 (74.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|