Csor.00g074520 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCAACGAAGTCCAACAAAATCAGAGACATCGTTAGGCTTCAACAGATCCTGAAGAAGTGGCAGGACGTTGGCGAAACTCATCAAAGACGGGGGGGCTATAGATACTCCGGCACGGCGGCGGGATCTGGCCGAAAAGAGCATGAAGTTTCTGAAGCGGAACGCTCTCAGCCGGATGCGATGTTTCCGGCGCGTCCGTACCGAAAAGGAATCTTTGCCGGTGAGCGGTCGGTGAGGAGCAAAAGCGATTTGTGA ATGGATTCAACGAAGTCCAACAAAATCAGAGACATCGTTAGGCTTCAACAGATCCTGAAGAAGTGGCAGGACGTTGGCGAAACTCATCAAAGACGGGGGGGCTATAGATACTCCGGCACGGCGGCGGGATCTGGCCGAAAAGAGCATGAAGTTTCTGAAGCGGAACGCTCTCAGCCGGATGCGATGTTTCCGGCGCGTCCGTACCGAAAAGGAATCTTTGCCGGTGAGCGGTCGGTGAGGAGCAAAAGCGATTTGTGA ATGGATTCAACGAAGTCCAACAAAATCAGAGACATCGTTAGGCTTCAACAGATCCTGAAGAAGTGGCAGGACGTTGGCGAAACTCATCAAAGACGGGGGGGCTATAGATACTCCGGCACGGCGGCGGGATCTGGCCGAAAAGAGCATGAAGTTTCTGAAGCGGAACGCTCTCAGCCGGATGCGATGTTTCCGGCGCGTCCGTACCGAAAAGGAATCTTTGCCGGTGAGCGGTCGGTGAGGAGCAAAAGCGATTTGTGA MDSTKSNKIRDIVRLQQILKKWQDVGETHQRRGGYRYSGTAAGSGRKEHEVSEAERSQPDAMFPARPYRKGIFAGERSVRSKSDL Homology
BLAST of Csor.00g074520 vs. NCBI nr
Match: KAG6608220.1 (hypothetical protein SDJN03_01562, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 171 bits (433), Expect = 1.35e-53 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of Csor.00g074520 vs. NCBI nr
Match: XP_022941145.1 (auxin-responsive protein SAUR32-like [Cucurbita moschata] >KAG6608228.1 Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 57.4 bits (137), Expect = 8.31e-08 Identity = 32/47 (68.09%), Postives = 36/47 (76.60%), Query Frame = 0
BLAST of Csor.00g074520 vs. NCBI nr
Match: XP_023524404.1 (auxin-responsive protein SAUR32-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 57.4 bits (137), Expect = 8.31e-08 Identity = 32/47 (68.09%), Postives = 36/47 (76.60%), Query Frame = 0
BLAST of Csor.00g074520 vs. NCBI nr
Match: KAG7037580.1 (Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 57.0 bits (136), Expect = 1.17e-07 Identity = 32/47 (68.09%), Postives = 36/47 (76.60%), Query Frame = 0
BLAST of Csor.00g074520 vs. NCBI nr
Match: XP_022981908.1 (auxin-responsive protein SAUR32-like [Cucurbita maxima]) HSP 1 Score: 55.8 bits (133), Expect = 3.23e-07 Identity = 31/47 (65.96%), Postives = 35/47 (74.47%), Query Frame = 0
BLAST of Csor.00g074520 vs. ExPASy TrEMBL
Match: A0A6J1FSQ6 (auxin-responsive protein SAUR32-like OS=Cucurbita moschata OX=3662 GN=LOC111446531 PE=3 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 4.03e-08 Identity = 32/47 (68.09%), Postives = 36/47 (76.60%), Query Frame = 0
BLAST of Csor.00g074520 vs. ExPASy TrEMBL
Match: A0A6J1J3D2 (auxin-responsive protein SAUR32-like OS=Cucurbita maxima OX=3661 GN=LOC111480907 PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.56e-07 Identity = 31/47 (65.96%), Postives = 35/47 (74.47%), Query Frame = 0
BLAST of Csor.00g074520 vs. ExPASy TrEMBL
Match: A0A6J1IEM6 (auxin-responsive protein SAUR72-like OS=Cucurbita maxima OX=3661 GN=LOC111476547 PE=3 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 1.36e-04 Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 0
BLAST of Csor.00g074520 vs. ExPASy TrEMBL
Match: A0A6J1F9Z3 (auxin-responsive protein SAUR71-like OS=Cucurbita moschata OX=3662 GN=LOC111443447 PE=3 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 1.90e-04 Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 0
BLAST of Csor.00g074520 vs. ExPASy TrEMBL
Match: A0A314YAQ0 (Auxin-responsive protein SAUR72-like OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_31214 PE=4 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 2.32e-04 Identity = 21/28 (75.00%), Postives = 25/28 (89.29%), Query Frame = 0
BLAST of Csor.00g074520 vs. TAIR 10
Match: AT4G31320.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 41.2 bits (95), Expect = 4.9e-04 Identity = 18/31 (58.06%), Postives = 25/31 (80.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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