Csor.00g072190 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g072190
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionred chlorophyll catabolite reductase
LocationCsor_Chr02: 3091021 .. 3092304 (-)
RNA-Seq ExpressionCsor.00g072190
SyntenyCsor.00g072190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGATATCATGGCACTTTATTAGACATTAACAAAGATGTCGAATTCCTGTCTTCTTTGGCGTCTTTCGCACTATTGAGCACTCAAGTTTTTCGTCCGATTACTTAACCATGGCGGACACGGGGATGAAAACCAAATGCTAAAATGGCGTTGATGGTTTATCAATCTCCAAAAGCTTTCAGTCCTCCGACGCCGGTGAAATCCCGTTTCAGAGCGTTGGTGATAAGGAATGCAGCATCGAACATGGTGGAGAACGTGTCGATCCAGCCGGGATCGTCGCGTCGAAGCTGAAGGAGTTTCCACATTTGTCGGCTTCTCACAGAGCTCTGATGACTGATCTCGTCGGTGCCACTGAATCTCGACTCGAAGATCATCTTCTTCCTTGCACTCTTCCTCCTGATGTTGAATACTTCCAGAATCAGAACGGGACTTCGCAAGGCTCTCTTCTCATCAGATCTGGCTCGCCGGACTCTTCTGTATGTCTCTCTGTCTCTGTCTCTTAAGAAATTTAGATAATCAAACTGTTTCGCGTTCCGAAATTGAGGATTTAAAATTTAAATTTCTTTCGTAGTCTGCAAATCAATTAGATATAAAATTGATTGTTTATGCATCTGTTAAGTACTTTTTGAATCCAAATTTATCAAATCTCCAACGCTTAGCATGTTAGATACCATGGATTATCGAGTTTTTACATTAATCAAAATCTCTAGCGATATATAATTGTTTTGTTAAGCATTTGAACTAAAATTCACTAAAATTCTATGTAAGTGTTTCTAACGAATCAAGAGTATGAGATAATTGTGAAAATTCTGTAGCAGCAGATCCAAATTCAAACTAACAAATTGGTAATGAGATTGTGTTCATTATTTAATCTATGTTTCTAAACTTTTGTGTTAGATTAATTACATATTGGGAAGTTGGTTGCATAGCAAGCTACCAACAGGAGCATCATTAAACATAGCAAGCTTTTCTGCCCACTTGAGGCCATCAACTGATGCTCCAAACTTCCTCATAGAATTCATTCAAAGCTCTCCAACCTCCCTCATTCTCATTCTGGATCTACCTCCCAGAAAGGATCTGGTGTTCAATTCAGACTACCTTCAATTGTTCTATGAAGATACAGGATTAGACAAATACCGTAAAGCAATCGAAGAACTCCCTGAAGTACGACCATATGTCATGTCCTCTCTCTTCTTCCGCTCCTTAGTTTCTCCAACTTCCATAATTGTCCGTGTCGATACGGAATCGGGAGAGGACCCGAACGCATGGAGGAGATTATAG

mRNA sequence

ATGGAGAGATATCATGGCACTTTATTAGACATTAACAAAGATGTCGAATTCCTGTCTTCTTTGGCGTCTTTCGCACTATTGAGCACTCAATCCTCCGACGCCGGTGAAATCCCGTTTCAGAGCGTTGGTGATAAGGAATGCAGCATCGAACATGGTGGAGAACGTGTCGATCCAGCCGGGATCGTCGCGTCGAAGCTGAAGGAGTTTCCACATTTGTCGGCTTCTCACAGAGCTCTGATGACTGATCTCGTCGGTGCCACTGAATCTCGACTCGAAGATCATCTTCTTCCTTGCACTCTTCCTCCTGATGTTGAATACTTCCAGAATCAGAACGGGACTTCGCAAGGCTCTCTTCTCATCAGATCTGGCTCGCCGGACTCTTCTATTAATTACATATTGGGAAGTTGGTTGCATAGCAAGCTACCAACAGGAGCATCATTAAACATAGCAAGCTTTTCTGCCCACTTGAGGCCATCAACTGATGCTCCAAACTTCCTCATAGAATTCATTCAAAGCTCTCCAACCTCCCTCATTCTCATTCTGGATCTACCTCCCAGAAAGGATCTGGTGTTCAATTCAGACTACCTTCAATTGTTCTATGAAGATACAGGATTAGACAAATACCGTAAAGCAATCGAAGAACTCCCTGAAGTACGACCATATGTCATGTCCTCTCTCTTCTTCCGCTCCTTAGTTTCTCCAACTTCCATAATTGTCCGTGTCGATACGGAATCGGGAGAGGACCCGAACGCATGGAGGAGATTATAG

Coding sequence (CDS)

ATGGAGAGATATCATGGCACTTTATTAGACATTAACAAAGATGTCGAATTCCTGTCTTCTTTGGCGTCTTTCGCACTATTGAGCACTCAATCCTCCGACGCCGGTGAAATCCCGTTTCAGAGCGTTGGTGATAAGGAATGCAGCATCGAACATGGTGGAGAACGTGTCGATCCAGCCGGGATCGTCGCGTCGAAGCTGAAGGAGTTTCCACATTTGTCGGCTTCTCACAGAGCTCTGATGACTGATCTCGTCGGTGCCACTGAATCTCGACTCGAAGATCATCTTCTTCCTTGCACTCTTCCTCCTGATGTTGAATACTTCCAGAATCAGAACGGGACTTCGCAAGGCTCTCTTCTCATCAGATCTGGCTCGCCGGACTCTTCTATTAATTACATATTGGGAAGTTGGTTGCATAGCAAGCTACCAACAGGAGCATCATTAAACATAGCAAGCTTTTCTGCCCACTTGAGGCCATCAACTGATGCTCCAAACTTCCTCATAGAATTCATTCAAAGCTCTCCAACCTCCCTCATTCTCATTCTGGATCTACCTCCCAGAAAGGATCTGGTGTTCAATTCAGACTACCTTCAATTGTTCTATGAAGATACAGGATTAGACAAATACCGTAAAGCAATCGAAGAACTCCCTGAAGTACGACCATATGTCATGTCCTCTCTCTTCTTCCGCTCCTTAGTTTCTCCAACTTCCATAATTGTCCGTGTCGATACGGAATCGGGAGAGGACCCGAACGCATGGAGGAGATTATAG

Protein sequence

MERYHGTLLDINKDVEFLSSLASFALLSTQSSDAGEIPFQSVGDKECSIEHGGERVDPAGIVASKLKEFPHLSASHRALMTDLVGATESRLEDHLLPCTLPPDVEYFQNQNGTSQGSLLIRSGSPDSSINYILGSWLHSKLPTGASLNIASFSAHLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDLVFNSDYLQLFYEDTGLDKYRKAIEELPEVRPYVMSSLFFRSLVSPTSIIVRVDTESGEDPNAWRRL
Homology
[Close]
BLAST of Csor.00g072190 vs. ExPASy Swiss-Prot
Match: Q8LDU4 (Red chlorophyll catabolite reductase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RCCR PE=1 SV=2)

HSP 1 Score: 211.5 bits (537), Expect = 1.1e-53
Identity = 99/180 (55.00%), Postives = 131/180 (72.78%), Query Frame = 0 

Query: 65  KLKEFPHLSASHRALMTDLVGATESRLEDHLLPCTLPPDVEYFQNQNGTSQGSLLIRSGS 124
           K  EFP++S + + LM DL+   E+RL+  LLPC LPPDV  F N NG+++ SL IRSG 
Sbjct: 51  KFMEFPYVSPTRKQLMVDLMSTVENRLQSQLLPCNLPPDVRNFNNPNGSAEASLHIRSGD 110

Query: 125 PDSSINYILGSWLHSKLPTGASLNIASFSAHLRPSTDAPNFLIEFIQSSPTSLILILDLP 184
             S I++++GSW+H K+PTG SLNI S S  L  ST APNF++E IQSS  SL+LILDLP
Sbjct: 111 KSSPIDFVIGSWIHCKIPTGVSLNITSISGFLNSSTKAPNFVVELIQSSSKSLVLILDLP 170

Query: 185 PRKDLVFNSDYLQLFYEDTGLDKYRKAIEELPEVRPYVMSSLFFRSLVSPTSIIVRVDTE 244
            RKDLV N DYL+ +Y+DT LD +R+++ +LPEV PYV  SLF RS  SPT+ ++++D E
Sbjct: 171 HRKDLVLNPDYLKEYYQDTALDSHRQSLLKLPEVNPYVSPSLFVRSAFSPTASMLKIDAE 230

[Close]
BLAST of Csor.00g072190 vs. ExPASy Swiss-Prot
Match: Q338P6 (Red chlorophyll catabolite reductase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RCCR1 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.0e-37
Identity = 81/177 (45.76%), Postives = 117/177 (66.10%), Query Frame = 0 

Query: 72  LSASHRALMTDLVGATESRLEDHLLPCTLPPDVEYFQNQNGTSQ--GSLLIRSGSPDSSI 131
           +  +HR +   L    E+RL   LLP  +PPDV  F++  G     GSL +R G+P S+I
Sbjct: 66  VEVAHREVARALASLAEARLGARLLPSAVPPDVAEFRSGGGAGNAVGSLDVRRGAPGSTI 125

Query: 132 NYILGSWLHSKLPTGASLNIASFSAHLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKDL 191
           +++L S LH K+P GA ++I S    L  STDAP+FL+EFIQ SPTS++++LDL PRKDL
Sbjct: 126 DFMLQSSLHCKVPNGA-IDITSLLIFLNASTDAPHFLMEFIQGSPTSIVVLLDLLPRKDL 185

Query: 192 VFNSDYLQLFYEDTGLDKYRKAIEELPEVRPYVMSSLFFRSLVSPTSIIVRVDTESG 247
             + +Y++ +YE+T +DK R+ +EELP+ RPY   SLF RS  S T+I++ +D   G
Sbjct: 186 ALHPEYIERYYENTQVDKQREKVEELPQARPYRSRSLFVRSTFSLTAILMSIDCGQG 241

[Close]
BLAST of Csor.00g072190 vs. ExPASy Swiss-Prot
Match: Q9MTQ6 (Red chlorophyll catabolite reductase (Fragment) OS=Hordeum vulgare OX=4513 GN=rccR PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 6.3e-28
Identity = 60/118 (50.85%), Postives = 86/118 (72.88%), Query Frame = 0 

Query: 129 INYILGSWLHSKLPTGASLNIASFSAHLRPSTDAPNFLIEFIQSSPTSLILILDLPPRKD 188
           I+++L S LH K+P GA ++I S   +L  STDAP+F++EFIQ SPTS++++LDL PRKD
Sbjct: 1   IDFMLQSSLHCKVPNGA-IDITSLFINLNASTDAPHFIMEFIQGSPTSMVVLLDLLPRKD 60

Query: 189 LVFNSDYLQLFYEDTGLDKYRKAIEELPEVRPYVMSSLFFRSLVSPTSIIVRVDTESG 247
           L  + +Y++ +YEDT +DK RK IE+LP+ RPY+  SLF RS  SPT++   +D   G
Sbjct: 61  LALHPEYIEKYYEDTEVDKQRKIIEQLPQARPYLSPSLFVRSAFSPTAVFFTIDCGKG 117

[Close]
BLAST of Csor.00g072190 vs. NCBI nr
Match: KAG6605234.1 (Red chlorophyll catabolite reductase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 509 bits (1310), Expect = 8.96e-182
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0 

Query: 1   MERYHGTLLDINKDVEFLSSLASFALLSTQSSDAGEIPFQSVGDKECSIEHGGERVDPAG 60
           MERYHGTLLDINKDVEFLSSLASFALLSTQSSDAGEIPFQSVGDKECSIEHGGERVDPAG
Sbjct: 1   MERYHGTLLDINKDVEFLSSLASFALLSTQSSDAGEIPFQSVGDKECSIEHGGERVDPAG 60

Query: 61  IVASKLKEFPHLSASHRALMTDLVGATESRLEDHLLPCTLPPDVEYFQNQNGTSQGSLLI 120
           IVASKLKEFPHLSASHRALMTDLVGATESRLEDHLLPCTLPPDVEYFQNQNGTSQGSLLI
Sbjct: 61  IVASKLKEFPHLSASHRALMTDLVGATESRLEDHLLPCTLPPDVEYFQNQNGTSQGSLLI 120

Query: 121 RSGSPDSSINYILGSWLHSKLPTGASLNIASFSAHLRPSTDAPNFLIEFIQSSPTSLILI 180
           RSGSPDSSINYILGSWLHSKLPTGASLNIASFSAHLRPSTDAPNFLIEFIQSSPTSLILI
Sbjct: 121 RSGSPDSSINYILGSWLHSKLPTGASLNIASFSAHLRPSTDAPNFLIEFIQSSPTSLILI 180

Query: 181 LDLPPRKDLVFNSDYLQLFYEDTGLDKYRKAIEELPEVRPYVMSSLFFRSLVSPTSIIVR 240
           LDLPPRKDLVFNSDYLQLFYEDTGLDKYRKAIEELPEVRPYVMSSLFFRSLVSPTSIIVR
Sbjct: 181 LDLPPRKDLVFNSDYLQLFYEDTGLDKYRKAIEELPEVRPYVMSSLFFRSLVSPTSIIVR 240

Query: 241 VDTESGEDPNAWRRL 255
           VDTESGEDPNAWRRL
Sbjct: 241 VDTESGEDPNAWRRL 255

[Close]
BLAST of Csor.00g072190 vs. NCBI nr
Match: KAG6605235.1 (Red chlorophyll catabolite reductase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 355 bits (912), Expect = 3.17e-120
Identity = 178/184 (96.74%), Postives = 182/184 (98.91%), Query Frame = 0 

Query: 63  ASKLKEFPHLSASHRALMTDLVGATESRLEDHLLPCTLPPDVEYFQNQNGTSQGSLLIRS 122
           +SKLKEFPHLSASHRALMTDLVGATESRLEDHLLPCTLPPDVEYFQNQNGTSQG+LLIRS
Sbjct: 48  SSKLKEFPHLSASHRALMTDLVGATESRLEDHLLPCTLPPDVEYFQNQNGTSQGALLIRS 107

Query: 123 GSPDSSINYILGSWLHSKLPTGASLNIASFSAHLRPSTDAPNFLIEFIQSSPTSLILILD 182
           GSPDSSIN+ILGSWLHSKLPTGASLNIAS SA+LRPSTDAPNFLIEFIQSSPTSLILILD
Sbjct: 108 GSPDSSINFILGSWLHSKLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILD 167

Query: 183 LPPRKDLVFNSDYLQLFYEDTGLDKYRKAIEELPEVRPYVMSSLFFRSLVSPTSIIVRVD 242
           LPPRKDLV NSDYLQLFYEDTGLDKYRKAIEELPEVRPYVMSSLFFRSLVSPTSIIVRVD
Sbjct: 168 LPPRKDLVLNSDYLQLFYEDTGLDKYRKAIEELPEVRPYVMSSLFFRSLVSPTSIIVRVD 227

Query: 243 TESG 246
           TESG
Sbjct: 228 TESG 231

[Close]
BLAST of Csor.00g072190 vs. NCBI nr
Match: XP_023521266.1 (red chlorophyll catabolite reductase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 348 bits (894), Expect = 1.72e-117
Identity = 174/184 (94.57%), Postives = 179/184 (97.28%), Query Frame = 0 

Query: 63  ASKLKEFPHLSASHRALMTDLVGATESRLEDHLLPCTLPPDVEYFQNQNGTSQGSLLIRS 122
           +SKLKEFPHLSASHRALMTDLVGA ESRLEDHLLPCTLPPDVEYFQNQNGTSQG+LLIRS
Sbjct: 48  SSKLKEFPHLSASHRALMTDLVGAAESRLEDHLLPCTLPPDVEYFQNQNGTSQGALLIRS 107

Query: 123 GSPDSSINYILGSWLHSKLPTGASLNIASFSAHLRPSTDAPNFLIEFIQSSPTSLILILD 182
           GSPDSSIN+ILGSWLHS+LPTGASLNIAS SA+LRPSTDAPNFLIEFIQSSPTSLILILD
Sbjct: 108 GSPDSSINFILGSWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILD 167

Query: 183 LPPRKDLVFNSDYLQLFYEDTGLDKYRKAIEELPEVRPYVMSSLFFRSLVSPTSIIVRVD 242
           LPPRKDLV N DYLQLFYEDTGLDKYRKAIEELPEVRPY MSSLFFRSLVSPTSIIVRVD
Sbjct: 168 LPPRKDLVLNPDYLQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVD 227

Query: 243 TESG 246
           TESG
Sbjct: 228 TESG 231

[Close]
BLAST of Csor.00g072190 vs. NCBI nr
Match: XP_023534657.1 (red chlorophyll catabolite reductase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 348 bits (894), Expect = 1.72e-117
Identity = 174/184 (94.57%), Postives = 179/184 (97.28%), Query Frame = 0 

Query: 63  ASKLKEFPHLSASHRALMTDLVGATESRLEDHLLPCTLPPDVEYFQNQNGTSQGSLLIRS 122
           +SKLKEFPHLSASHRALMTDLVGA ESRLEDHLLPCTLPPDVEYFQNQNGTSQG+LLIRS
Sbjct: 48  SSKLKEFPHLSASHRALMTDLVGAAESRLEDHLLPCTLPPDVEYFQNQNGTSQGALLIRS 107

Query: 123 GSPDSSINYILGSWLHSKLPTGASLNIASFSAHLRPSTDAPNFLIEFIQSSPTSLILILD 182
           GSPDSSIN+ILGSWLHS+LPTGASLNIAS SA+LRPSTDAPNFLIEFIQSSPTSLILILD
Sbjct: 108 GSPDSSINFILGSWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILD 167

Query: 183 LPPRKDLVFNSDYLQLFYEDTGLDKYRKAIEELPEVRPYVMSSLFFRSLVSPTSIIVRVD 242
           LPPRKDLV N DYLQLFYEDTGLDKYRKAIEELPEVRPY MSSLFFRSLVSPTSIIVRVD
Sbjct: 168 LPPRKDLVLNPDYLQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVD 227

Query: 243 TESG 246
           TESG
Sbjct: 228 TESG 231

[Close]
BLAST of Csor.00g072190 vs. NCBI nr
Match: XP_022948072.1 (red chlorophyll catabolite reductase [Cucurbita moschata])

HSP 1 Score: 347 bits (891), Expect = 4.92e-117
Identity = 174/184 (94.57%), Postives = 179/184 (97.28%), Query Frame = 0 

Query: 63  ASKLKEFPHLSASHRALMTDLVGATESRLEDHLLPCTLPPDVEYFQNQNGTSQGSLLIRS 122
           +SKLKEFPHLSASHRALMTDLVGATESRLED LLPCTLPPDVEYFQNQNGTSQG+LLIRS
Sbjct: 48  SSKLKEFPHLSASHRALMTDLVGATESRLEDRLLPCTLPPDVEYFQNQNGTSQGALLIRS 107

Query: 123 GSPDSSINYILGSWLHSKLPTGASLNIASFSAHLRPSTDAPNFLIEFIQSSPTSLILILD 182
           GSPDSSIN+ILGSWLHS+LPTGASLNIAS SA+LRPSTDAPNFLIEFIQSSPTSLILILD
Sbjct: 108 GSPDSSINFILGSWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILD 167

Query: 183 LPPRKDLVFNSDYLQLFYEDTGLDKYRKAIEELPEVRPYVMSSLFFRSLVSPTSIIVRVD 242
           LPPRKDLV N DYLQLFYEDTGLDKYRKAIEELPEVRPY MSSLFFRSLVSPTSIIVRVD
Sbjct: 168 LPPRKDLVLNPDYLQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVD 227

Query: 243 TESG 246
           TESG
Sbjct: 228 TESG 231

[Close]
BLAST of Csor.00g072190 vs. ExPASy TrEMBL
Match: A0A6J1G868 (red chlorophyll catabolite reductase OS=Cucurbita moschata OX=3662 GN=LOC111451765 PE=4 SV=1)

HSP 1 Score: 347 bits (891), Expect = 2.38e-117
Identity = 174/184 (94.57%), Postives = 179/184 (97.28%), Query Frame = 0 

Query: 63  ASKLKEFPHLSASHRALMTDLVGATESRLEDHLLPCTLPPDVEYFQNQNGTSQGSLLIRS 122
           +SKLKEFPHLSASHRALMTDLVGATESRLED LLPCTLPPDVEYFQNQNGTSQG+LLIRS
Sbjct: 48  SSKLKEFPHLSASHRALMTDLVGATESRLEDRLLPCTLPPDVEYFQNQNGTSQGALLIRS 107

Query: 123 GSPDSSINYILGSWLHSKLPTGASLNIASFSAHLRPSTDAPNFLIEFIQSSPTSLILILD 182
           GSPDSSIN+ILGSWLHS+LPTGASLNIAS SA+LRPSTDAPNFLIEFIQSSPTSLILILD
Sbjct: 108 GSPDSSINFILGSWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILD 167

Query: 183 LPPRKDLVFNSDYLQLFYEDTGLDKYRKAIEELPEVRPYVMSSLFFRSLVSPTSIIVRVD 242
           LPPRKDLV N DYLQLFYEDTGLDKYRKAIEELPEVRPY MSSLFFRSLVSPTSIIVRVD
Sbjct: 168 LPPRKDLVLNPDYLQLFYEDTGLDKYRKAIEELPEVRPYAMSSLFFRSLVSPTSIIVRVD 227

Query: 243 TESG 246
           TESG
Sbjct: 228 TESG 231

[Close]
BLAST of Csor.00g072190 vs. ExPASy TrEMBL
Match: A0A6J1L1Y1 (red chlorophyll catabolite reductase-like OS=Cucurbita maxima OX=3661 GN=LOC111499663 PE=4 SV=1)

HSP 1 Score: 347 bits (889), Expect = 4.80e-117
Identity = 173/184 (94.02%), Postives = 180/184 (97.83%), Query Frame = 0 

Query: 63  ASKLKEFPHLSASHRALMTDLVGATESRLEDHLLPCTLPPDVEYFQNQNGTSQGSLLIRS 122
           +SKLKEFPHLSASHRALMTDLVGA ESRLEDHLLPCTLPPDVEYFQNQNGTSQG+LLIR+
Sbjct: 48  SSKLKEFPHLSASHRALMTDLVGAIESRLEDHLLPCTLPPDVEYFQNQNGTSQGALLIRT 107

Query: 123 GSPDSSINYILGSWLHSKLPTGASLNIASFSAHLRPSTDAPNFLIEFIQSSPTSLILILD 182
           GSPDSSIN+ILGSWL+S+LPTG SLNIAS SA+LRPSTDAPNFLIEFIQSSPTSLILILD
Sbjct: 108 GSPDSSINFILGSWLNSQLPTGTSLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILD 167

Query: 183 LPPRKDLVFNSDYLQLFYEDTGLDKYRKAIEELPEVRPYVMSSLFFRSLVSPTSIIVRVD 242
           LPPRKDLVFN DYLQLFYEDTGLDKYRKAIEELPEVRPYVMSSLFFRSLVSPTSIIVRVD
Sbjct: 168 LPPRKDLVFNPDYLQLFYEDTGLDKYRKAIEELPEVRPYVMSSLFFRSLVSPTSIIVRVD 227

Query: 243 TESG 246
           TESG
Sbjct: 228 TESG 231

[Close]
BLAST of Csor.00g072190 vs. ExPASy TrEMBL
Match: D1MWY7 (Red chlorophyll catabolite reductase OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=CitRCCR PE=2 SV=1)

HSP 1 Score: 315 bits (808), Expect = 8.66e-105
Identity = 155/184 (84.24%), Postives = 168/184 (91.30%), Query Frame = 0 

Query: 63  ASKLKEFPHLSASHRALMTDLVGATESRLEDHLLPCTLPPDVEYFQNQNGTSQGSLLIRS 122
           +SKLKEFPHLS SHRALM DL+GA E RLED LLPC LPPDVEY++NQ+GTS+G+LL+RS
Sbjct: 45  SSKLKEFPHLSGSHRALMADLIGAIEDRLEDRLLPCALPPDVEYYRNQSGTSEGALLVRS 104

Query: 123 GSPDSSINYILGSWLHSKLPTGASLNIASFSAHLRPSTDAPNFLIEFIQSSPTSLILILD 182
           GSPDSSIN+IL SWLHS+LPTGASLNIAS SA+LRPSTDAPNFLIEFIQSSPTSLILILD
Sbjct: 105 GSPDSSINFILASWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILD 164

Query: 183 LPPRKDLVFNSDYLQLFYEDTGLDKYRKAIEELPEVRPYVMSSLFFRSLVSPTSIIVRVD 242
           +PPRKD V N DYLQLFYEDT LD YRK IEELPE RPYVMSSL+FRSLVSPTSII RVD
Sbjct: 165 MPPRKDPVLNPDYLQLFYEDTRLDTYRKTIEELPETRPYVMSSLYFRSLVSPTSIISRVD 224

Query: 243 TESG 246
           TESG
Sbjct: 225 TESG 228

[Close]
BLAST of Csor.00g072190 vs. ExPASy TrEMBL
Match: A0A1S3C745 (red chlorophyll catabolite reductase-like OS=Cucumis melo OX=3656 GN=LOC103497431 PE=4 SV=1)

HSP 1 Score: 311 bits (798), Expect = 2.95e-103
Identity = 155/184 (84.24%), Postives = 165/184 (89.67%), Query Frame = 0 

Query: 63  ASKLKEFPHLSASHRALMTDLVGATESRLEDHLLPCTLPPDVEYFQNQNGTSQGSLLIRS 122
           +SKLKEFPHLS S RALM DL+ A E R ED LLPCTLPPDVEY+QNQ+GTS+G+LLIRS
Sbjct: 45  SSKLKEFPHLSTSQRALMADLINAIEDRFEDRLLPCTLPPDVEYYQNQSGTSEGALLIRS 104

Query: 123 GSPDSSINYILGSWLHSKLPTGASLNIASFSAHLRPSTDAPNFLIEFIQSSPTSLILILD 182
           GSPDSSIN+IL SWLHS+LPTGASLNIAS SA+LRPSTDAPNFLIEFIQSSPTSLILILD
Sbjct: 105 GSPDSSINFILASWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILD 164

Query: 183 LPPRKDLVFNSDYLQLFYEDTGLDKYRKAIEELPEVRPYVMSSLFFRSLVSPTSIIVRVD 242
           LPPRKD V N DYLQ FYEDT LD YRK IEELPE RPYVMSSLFFRSLVSPTSII R+D
Sbjct: 165 LPPRKDPVLNPDYLQSFYEDTRLDTYRKTIEELPETRPYVMSSLFFRSLVSPTSIISRID 224

Query: 243 TESG 246
           TESG
Sbjct: 225 TESG 228

[Close]
BLAST of Csor.00g072190 vs. ExPASy TrEMBL
Match: A0A0A0LJH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285300 PE=4 SV=1)

HSP 1 Score: 311 bits (796), Expect = 5.93e-103
Identity = 154/184 (83.70%), Postives = 166/184 (90.22%), Query Frame = 0 

Query: 63  ASKLKEFPHLSASHRALMTDLVGATESRLEDHLLPCTLPPDVEYFQNQNGTSQGSLLIRS 122
           +SKLK+FPHLS+S RALM DL+ A E R ED LLPCTLPPDVEY+QNQ+G S+G+LLIRS
Sbjct: 45  SSKLKDFPHLSSSQRALMGDLINAIEDRFEDRLLPCTLPPDVEYYQNQSGNSEGALLIRS 104

Query: 123 GSPDSSINYILGSWLHSKLPTGASLNIASFSAHLRPSTDAPNFLIEFIQSSPTSLILILD 182
           GSPDSSIN+IL SWLHS+LPTGASLNIAS SA+LRPSTDAPNFLIEFIQSSPTSLILILD
Sbjct: 105 GSPDSSINFILASWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILD 164

Query: 183 LPPRKDLVFNSDYLQLFYEDTGLDKYRKAIEELPEVRPYVMSSLFFRSLVSPTSIIVRVD 242
           LPPRKDLV N DYLQ FYEDT LD YRK IEELPE RPY+MSSLFFRSLVSPTSII RVD
Sbjct: 165 LPPRKDLVLNPDYLQSFYEDTRLDTYRKTIEELPEARPYIMSSLFFRSLVSPTSIISRVD 224

Query: 243 TESG 246
           TESG
Sbjct: 225 TESG 228

[Close]
BLAST of Csor.00g072190 vs. TAIR 10
Match: AT4G37000.1 (accelerated cell death 2 (ACD2) )

HSP 1 Score: 211.5 bits (537), Expect = 8.2e-55
Identity = 99/180 (55.00%), Postives = 131/180 (72.78%), Query Frame = 0 

Query: 65  KLKEFPHLSASHRALMTDLVGATESRLEDHLLPCTLPPDVEYFQNQNGTSQGSLLIRSGS 124
           K  EFP++S + + LM DL+   E+RL+  LLPC LPPDV  F N NG+++ SL IRSG 
Sbjct: 51  KFMEFPYVSPTRKQLMVDLMSTVENRLQSQLLPCNLPPDVRNFNNPNGSAEASLHIRSGD 110

Query: 125 PDSSINYILGSWLHSKLPTGASLNIASFSAHLRPSTDAPNFLIEFIQSSPTSLILILDLP 184
             S I++++GSW+H K+PTG SLNI S S  L  ST APNF++E IQSS  SL+LILDLP
Sbjct: 111 KSSPIDFVIGSWIHCKIPTGVSLNITSISGFLNSSTKAPNFVVELIQSSSKSLVLILDLP 170

Query: 185 PRKDLVFNSDYLQLFYEDTGLDKYRKAIEELPEVRPYVMSSLFFRSLVSPTSIIVRVDTE 244
            RKDLV N DYL+ +Y+DT LD +R+++ +LPEV PYV  SLF RS  SPT+ ++++D E
Sbjct: 171 HRKDLVLNPDYLKEYYQDTALDSHRQSLLKLPEVNPYVSPSLFVRSAFSPTASMLKIDAE 230

The following BLAST results are available for this feature:
BLAST of Csor.00g072190 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8LDU41.1e-5355.00Red chlorophyll catabolite reductase, chloroplastic OS=Arabidopsis thaliana OX=3... [more]
Q338P62.0e-3745.76Red chlorophyll catabolite reductase 1, chloroplastic OS=Oryza sativa subsp. jap... [more]
Q9MTQ66.3e-2850.85Red chlorophyll catabolite reductase (Fragment) OS=Hordeum vulgare OX=4513 GN=rc... [more]
BLAST of Csor.00g072190 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6605234.18.96e-182100.00Red chlorophyll catabolite reductase, chloroplastic, partial [Cucurbita argyrosp... [more]
KAG6605235.13.17e-12096.74Red chlorophyll catabolite reductase, chloroplastic, partial [Cucurbita argyrosp... [more]
XP_023521266.11.72e-11794.57red chlorophyll catabolite reductase-like [Cucurbita pepo subsp. pepo][more]
XP_023534657.11.72e-11794.57red chlorophyll catabolite reductase-like [Cucurbita pepo subsp. pepo][more]
XP_022948072.14.92e-11794.57red chlorophyll catabolite reductase [Cucurbita moschata][more]
BLAST of Csor.00g072190 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G8682.38e-11794.57red chlorophyll catabolite reductase OS=Cucurbita moschata OX=3662 GN=LOC1114517... [more]
A0A6J1L1Y14.80e-11794.02red chlorophyll catabolite reductase-like OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
D1MWY78.66e-10584.24Red chlorophyll catabolite reductase OS=Citrullus lanatus subsp. vulgaris OX=260... [more]
A0A1S3C7452.95e-10384.24red chlorophyll catabolite reductase-like OS=Cucumis melo OX=3656 GN=LOC10349743... [more]
A0A0A0LJH45.93e-10383.70Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285300 PE=4 SV=1[more]
BLAST of Csor.00g072190 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G37000.18.2e-5555.00accelerated cell death 2 (ACD2) [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009439Red chlorophyll catabolite reductasePFAMPF06405RCC_reductasecoord: 76..248
e-value: 2.0E-77
score: 259.8
IPR009439Red chlorophyll catabolite reductasePANTHERPTHR34685RED CHLOROPHYLL CATABOLITE REDUCTASE, CHLOROPLASTICcoord: 56..247
NoneNo IPR availableGENE3D3.40.1500.20coord: 61..252
e-value: 2.7E-74
score: 251.7
NoneNo IPR availablePANTHERPTHR34685:SF2RED CHLOROPHYLL CATABOLITE REDUCTASE, CHLOROPLASTICcoord: 56..247

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g072190.m01Csor.00g072190.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015996 chlorophyll catabolic process
biological_process GO:0010363 regulation of plant-type hypersensitive response
cellular_component GO:0009507 chloroplast
cellular_component GO:0005829 cytosol
cellular_component GO:0005739 mitochondrion
molecular_function GO:0051743 red chlorophyll catabolite reductase activity