Csor.00g071140 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g071140
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	polyadenylate-binding protein RBP47-like
Location	Csor_Chr02: 2330786 .. 2344240 (-)
RNA-Seq Expression	Csor.00g071140
Synteny	Csor.00g071140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACACGCAGGTTTTCTCGGTTAAGGTCATATGCAATAAGCAAACTGGTCAATCTGAGGGCTATGGATTTGTTGAGTTCTATTCACATGCAACAGCTGATAAAGTGTTGCAGAACTATAATGGTGCTATGATGCCAAACACAGATCTGCCTTTCCGTCTCAATTGGGCAACCTTTAGTGGAAATGATAGGCGACCGGACACTGGTTCTGACCTATCTATATTTGTTGGTGATTTGGCTGCTGATGTAACTGATGCTATGCTGCAAGAAACTTTCTCTAGTAAATACACATCTGTTAAAGGAGCAAAGGTGGTTATTGATTCAAATTCAGGGCGTTCAAAGGGTTATGGATTTGTCAGGTTTGGTGATGAAAATGAAAAGTCCAGGGCTATGACTGAAATGAATGGGATATATTGTTCAAGTAGACCCATGCGCATTGGTGTTGCAACACCAAAGAAAGCATCTGGATATCAACAAGGTTATTCTTCACAGGGTTAGTATTGGTTCGCTTCTGGCATCACTGCTGGATGTTGTTGTTTATTGATCTATTATTCAGTTTTTCATGCTTTTGGTGACATTATTCTTTATTATGGGACATCCAAGTTGGAGTGTATTTCATCTTTTTGGTACTGTGTTTTTCTGGATGGCAAGTTTCTTTTTTCTTTTTATCTTTCTCCTCCTGGTGCAATGATAAGTGAAGCATTATTTTCAAGAAGTTTATGGAACCAGCTGGCAGTATTAATGTTTTTGGCTGTATGTCAACTAGAAGACTAGAAGTTTAATATTTCCACCTGACATGTGCATGGTTCTTTAGCATCTGTCCCAGTAATATTTTCTTTTTTCATGAATGGGTTTTAGACATTGGCATAATGAACATGGGTTTTGTTAGGCCTCCAATTGTGAATGTTTATTCTAGGCAGGGTAGGGAATGGAAAGAATAGTTAGTTAGCTGTGGAGCATTTTTTGCCTTTTTAGTGTGGGGAGGTAGTAAGGAACGTTTATGAGATATCTTGGGAATTGTGGAGCATTTTTGGAGAGATCGACCCTCTTGAATTAGCTAGGAATCTTATATGGTGATATTATCACTCTGTCTACTTTAACATAAATAAACGATCCCAGATACCTATAAGATTTGCATTCTACCTCTTGTGTAGAAGATGTTATAATGATTGATTTATTTCTTAGTTATAAGGTAAGGTGTGAGTAAAATGCAGTTAATATGTTAACTCGTTTTTGAGATGAGATATTAATTGGATGCCTATTTCTGTTTTTCTTTAAAATTTTGTTTAGCTTTAGTTCTGGCTGGTGGACATGCAAATGGCATGGCTGTTCAGGGACCACAAGATGGCGAGTCGAACAACACGACTGTTAGTTTATTCCTTCCTGTCTCAATACTAATTTTTTTTTTCCGGCTAATACATACCTTACCAACTTGTTCTACTTCAGATATTTGTTGGCGGCCTTGATTCTGATGTTAGTGATGAAGATCTCAAGCAAACTTTCTCTAAATTTGGTGAGATTGTCTCTGTGAAAATTCCTATTGGAAAGGGATGTGGATTTGTGCAGTTTGCCAACAGGTATTCTTCTTATTTTTCTGTGGAGCTTTCTGTCGTTAAATATGCAGCTTCTATTGCCGATCTTTACATCTCGCAAGTAATTAGAGGTTACAAAAAGGCAAGGTCACCGGTCAAGTTTGATTGACCCGTGAAATAGCAGTCAGTTTTGTTTGCCATAGTAGTTAGCGATATTGGGTCTACGATTTATTACCTATATGCCTGTGTCTTCTTTTAGGATATTTTGATTATGTAGCCTGCTTTTCTAGAATATATGTAGATATGTACTTTTTTTATGATAATAATTAGCTATATATTTTTAAAAAGTAATGGCAAACCAAATTGACTTGATAGTAATCACCTTTTCTTCTTCTTTTTATTACCTAAAAAGTAACTTTTTATTGTAATCACTGATTTACTTAATTGATGCTACCTTGATATAGATTATGATAATCATGGTAGTCACTCATTGACATAGGTTTTATTCTTCGCCCTATATGTTATTATTATTTTTTTTTCTGAGATTCAATTTCTTCAATACTAATTTTCAATTAATTTCCAACGACCCCTTCTTTTATAGAGAAGTAAACACATGCGCCAGTAAGCATGGAGGATATTTAGTTAAAAGTAAATTTAGAAGTCAAAACTCTTTAGAAAATTTCCATGCATATTAAATCATTTATTTTTTTCAATAAAAAAGTTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGGGAGTATATGAGGCCAACCGAGAGAAGTTGTGCCCCTTTTGTTCGGGAGGTGTATACAATTCCAGTGATCTATAAGCGATGTAAGAGCAAGACTTTAATCACGAAAATATGGGGAGAAATTACACCACGTTAGAGCAAGATAAATAAGGTATTCAAAAAAGGATTCGATTTCCAAAGCATTGTCCTTGAAAATACAGCAGTTAAGTTAAAGGCAAGTTAACCAAAGAAAAGCTTTGTTGATAGAAGAGTAGACAACTTCCTTTTCTTTGCTTAAGAGATGATCCAAAACGAGGATTTCGAGAAATATAATGGTAACATTTGGGCAATGTGGAATCTGACTGCCATAAGAACCCTCTTCCAATAGGACCGTGCAAATTTACATGTCATGAAAAGGTGCATCATAGTTTCTCCACTGTCATGACAGAGGAGACACCAGTTTGGAGAGGAAACAATCCATGAGGATTTTTTTGAGCAAGGTGTCGGCTATGTTGATGCATCCATGATTAAATTCGCAATTCCCGGATGAATTATTTTACTTTCTTTGGGACAGGGCCTTTCCATAGACGTACACAAAAATCCTTGTGCATAATGTGATCCCTGGATGTAAGCTTTTTGTGTAACAACTCAAGTCCACCGCTAGCAGATATTGTCTTCTTTGGGCTTTCCCTTTCGGGCTTCCCCTCAAGGCTTTAAAACGCATCTGCTAGGGAAAGGTTTCCACTCCCTTATAAAGGGTGTTTTGTTCTCCTCCCCAACCAATGTTGGATATCACAATCCACCCCCTTCAGGGCCCAGCATCCTCGTTGACACTCGTTCCCTTTCTCCAATCGATGTGGGACCCCTACCAAATCCACCCTCCTTCAAGGAACAACCTCCTTTGCGGCACATTGCCCGGTGTAGATACCATTTGTAACGGCTCAAGTCTACCCCTAGCAGATATTGTCCTCTTTGGACTTTCCCTTTTGGGCTTCCCCTCGAGACTTTAAAACGCATCTGCTACGGAAAGGTTTCCACACCCTTATAAAGGGTGTTTCATTCTCCTCTCCAACCAAAGTGGGATATCACATTTTGTGTTAGGGATTTTACTGTGAAGGAAGGTGCCTCTGTCATCCAGAGTCCATCTCCAAAGATCTTCGATATTGGGGCTTGGAGGAGGGGAAATAATGGTGGAAAGGATAGACCAGTCATTGAACTACATTCCTTCCTTCCCCCCAGTTTATTAGGAACTTCAAAGTTTTATAGAACAACCAAATTAAATGACATAGCTTGTCGTTTGAGAGTGAATTCTTACTAATTTTTTTGTGATCAGATTAGTCCATAAATCTTGAATTATGCAAGGTTGTGTTATCAAGCGATAAGGAATTCTCCCAAGATTGGAAGACGTGGACTTTTTAGTACTTGCTTTCTTAGTCACTGGCTCCTGCATGGGTGATTTCCTTGTTTATAATTTCATTTGATTTCTTTTTTTTATTAGAAGAAAAGAAATAATCAAGGAATACCCTATAGGCCTGGGAGGTAAGAGATCCCCTTTCCTAATAGAAGGATTATACAAGTTGCTTACAGAAGCAGAATAGTTACAAAATATGCTGTATAAGGCTATCCAATTTGAAGCTGTAAACTTGGCACTCAAGTCAGACATGGGTGTTTGCTCTTTACTCATACAACAAGCTACCTTTTGCCCGGTGCCTAAAATGAGCTACTGAACACAATTGGGTGAGGAGATTAATCCTATATGGTCCCTTCAACTTTAAAGAAGCTAACTTTTGGATTCATTCGAAACTGGTTTAAACTATTTCTCCCAATTTGAAGCTGTAAACCATTCAGTCACAAAAATCAGCAAAATTCATTATAAGTAGTTTTGTAATTGGCATTTAGCCTTTATTCTTGCTGATTTGGACCCCTGCTTAATCTACAAAATGATAGGTTGGTTTCTTACCGAAACTATGAACTTCTTCTCAAAATATCTTTTTGCAACCTATCTTCGGTGCTGAGGCTTTTGTAAGCCAAAGTTCATTGATATAATTTTACTTCTTTCAGAAAATTTCCATCTCGAAATCAATTTGGCTGAAATATTCTGATCAAGCTTGCCTTCACCATGTTTGTTGAAACAATTGCCAAATTTGCAAGATTATACACTCAATCCTCAAATTTTGTAACTATATCATCATTTTTATTGATTAGCAAAAACAAGCTTTAACTTATGAGGAGCAAGCCCATTTCATAATAATCCATCAAATAGATTCGTTCTAAAGAAATGAATGCTTTCTTTCTTTTCTCCCCTCCCCCTCCGAGAATTTCATTTGTACAATGAAGTTTTTTTTTTTTTTTTTTTTTTCTTCACTTTTTTTTTAAAAAAAAAATTGTGAATGCTTGCTTGAATAGATTAAATTAGCAATTATACGTTGCTTGTTTGTACGCTCAGCTGGTTTCTTTATACATTTTAAAGACTGGCAAAGTTGATTGATTGTTTGATTGTTTGTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATATCAATTGTGTCTCTGGTGCCATTTTCTTCAACATCATTAATGGAAAGCCAAGAGATAAGATCTTTAGCTTCAAGATGTCATAGACGAGGAGTGCCTCATTTTCCATTCCTTCTCTTTTCCTCCTCATTAGTAAGGTGGATTGTGTGTGTATGTTCGAGGCCTTGAGGTGCAAAGTACAGTGACTCAAGGCTTCTTTATTAATTGGAAAAAAAAAAAAAAAAACGAAATTTCCTAACCCTAAATGCTTAAGTCGGTTTCATAATCACACACACACAAAGAAAAAAAAAAAAGTTTGTACCACACTTAAGCTCTATAAGGCTATGACCTGAGCAGCTACTGAACCTGAACCTTCTTGAACTCGGTAAAGCTCTTGCTTGAATTGTAACCTAAGACTCAACACGAGAAAAACTCTAATTCATTGTTACCACAGGCGATTCTGAAAAACAAAGTTCCATTCGAGATTGCGCAGAAGGTTGGGAAACCAAGCTACTATAATGCTTTAGAAAACACTATGGATCTTATTTTATGGATATAAGGGACAGAACCACAAGGAAACTTATTCCTTAGTTGCCTCCTTGCCAACAAATATTGGTCCTATGCACACACACACACACACACATATTTTTAAGAAACTGAACGTTCATGGTGAGTAATGAAAGAAATACAAGGGCAGATAAAAATCCAACCCAACAAAAAGGAAGCCCCAAAACCAACCAAGGGACTCTAATCCAACAAAATCAAACCAATATCATAATTACAAAAAGTCTAGTGACCGATGATAGCAAGGAGGGCATTAAACCTTGTCAAGTCCCAAATCTCGTCACAAGACCCTAAAGACTCTATTATTCCTCTCAATAAATTTCATCAAAATTGCAAAGAAACTAGCATGCCTCAAAACTTTACCTTTACAGGTACTATATTCTATCCTCCTTCAGATGTCACATAGCAACAAATTGACAACTGCCGACTGCTGAGTGTGTTTTCTGAAAATGGGGTTTCAAATTAAAATTTAAACTCATTTGCGTTGCAGGATTTTCTCATTTGAGCTACTTAAAATTTTATACTATTTTACTTAATTGTTTAATCTACAAGTTATTCGGATGAATGAATTTTTGAAAGAAGTTTGGATGGATTTTTTAATTCTCATAATTAATCCTCTTTTTATTTATATCAGTATGAAAGTATAATGTAGTCGATCAATTTATACTTGAAAGAACAGTTGATGATTTGTAGATAAACAATGACTTAAGAAAATATTGAAGAAACCTATAAGAAGTGCAAATTATTGTTTATGTTCTTGTTGTTCTTGTTTCTAATTGTGTTTAGATGTCAGTTTTCTGAGTCAGAAACATTTTTTGTATTTAAAAATAATATTAATTTTTAAATATAGCTTCTGTACAACGCCATGGTCAAGGTCCTAAGTTTTCATGCCATGTTTCACGATATGATATCTCCTATTGTTCCCTTTTGTTTCAAGCAAAACAAACTGAGATATAAAGTTCGTATTGATTTTCAAGAGAGGAAAATTTCTATTGTCTTGTATCGTTCAGTCCAAGATTTAAGGGGTAAATTTTTACAGATAAAGAAATACAACTAAAAGCCAAATAAAGGGGAACCCAACGGGACAAAAAAGAAGACAAGGGAATGAACAAAAGTTAAAGAAATAATTAAGGGAACAAAATACAAGGGAGGAAGGTCTATACGTCGGGTCTTCGGCAATACTGATAGTGGCTTGGTTATCACAGTAGTCTTCCATTGGTGCCTCTGATGTTACTTTTAGTTAAGATCAGATTCTTTGGATCCACATTCCTTTACATATTCCTTGTGTGAGCTCTTAATCAGGTTCAATATTGCTTCTTGATAATGAGTTGTTTTTTACTCTGCCATATTACTAGGTTGCCCCACACAAAGGTGCAATAGGTGGCAGTTGATCTTCTATTTACTTTTGAACTTGCCGAATCAACATCTGTGAAGACTTCATCTTTCTTCTTGTTGACTTCTTGAGATATAGTCTTTCTCCAGGCATTCCTTTTAAGTATCTTAGAATCATGTAGACTGTTTGCGTATGTTCTATGGTTGGATTGTTCATAAATTGGTCTACATAGCTAACTGCCTGCAAAATGTGTGTCAGGTATAGTATCAAAGAACCTTGAGATGCTAATCCACGAAAAACGGTACAAAAAATTCAAAAGAACTCATCTAACTAACTCCACAAAAGAACCCGTAAGTTTGCCGCTAATGCTACTTCAATGAATTATGAAAGACACAAGAATTAGCCTGGAACAGTTCCTTTGTGGAAATGTATGCAGCCAAACAAAGACTACTCGAATTGTTCAAGTGGATCTAGTAGCTTAGTAATTACCTTAGCTTGTCTTTAGTAATTACTAAGCTAATTGAGCGTTATTCCATAGAGATCTCAACCTGGCTGTGAATGAGATTTCCAACTAGTCTCTGATATATCTCTTTGTTGCCATAGTATTTTCGTTTCCAAAGTTGTGATTAGGATCAATTGGAGTACTGGTAGGTTTACACCTAAGCATTCCAATTTTCTTGAGAGAAGGTTTACCAACTCTTTCCTTGAGCGAGCCACTTCAATGCCTAGGAAGTATTTTAGAGGTCCTAGATCTTTTACTTTGAACCTTTTCCCTCTCCCGTTCTTTCTTGATTTTGCAGGGTAGATTTTAATGTTACTAGATGGTCTCATGAGAAATCTACTTCCAGCTCCAACTAGAAGCATGGAAATTTCAGCCAATTCATTGAATATGCTAGCCTCATTGATATGCTAGCTCTTCCAAAATGGATGATTTACTTGGTCTTGTAATCGTGCATCCTCCTATCACTCTTTGATAAACTTGTTATCTTACGACTCGACTTTCCGAACACGTACCAATTAGAGCTGTTACTTGAAAACAAGGCTTTTGCAAGGAAAAGATGTTTTGATACAAGTAAAACATGCTCAGGGTACCCTTTAAAATAACCTTTGGAAGGCATGCATTTAAAACAAATCAAACTAACACTACAAACTTTGGAAATACACAATCAATTCACAATCTCCCTGATCCACGTAAACCAAAGAGTTTTCAAATACAAACATATTAATGTAGAAGCATTTGAAAACATAAAAACACTGGAGTCAACCCATGGTCTGTTCTCTTCACCCTATTCACCCTACTCAAACTTTCTTGCGCCATTCCAACACTTATTTAATCTAGAGTTACTTGCCTAACCCTAACAAAAAAAAAAAAAAAACATCCTAAAATTAGCTAAATCCATGCAATTCAAGCCAAGGCAAGGAGAATTAAGGTCTACTGGCCTTGAAAGTCGAAGTAGAATGAGAAAAAGTGGTAGGACCAAAACTGGTCCAATTAAATTGGAGTTTGTGAACCAGTTTGATTGAACCGCTGGATGCTGATCCCAAAATCGAAACAGTCACTCCTTGTGGCTTCACGTCTTTTGGAGCTATGTCTGCTGCGCGATTTTCAACGACTACAGTTCCTTAGAAGCGGCAGAGACGACTTTGCTGCAACGAAGGAAATCAAATAGTGAGAATCCCTTGAATTCTAAGCCCAAATCATAGCAAAATTGGGGAAATACACCCTTATGTTTGCTCCAATGTGGTGGTGGGAGGTAAGTCCCACTGGTGGTAGATGGTGATTGGTTGAAGAGAACAATAGAACTCGAGGGGTGGCAAAATCCCTTAATGAATCCATGACGACGATCGAAGGAAAACACAAAAGATTTGGTGAAGACAAGGAATAAATGCAACAACTTGGATGACGACGGTTGATCCTGGGCTGCGTGCACTATGAGAGGAGAAGACCTCACTCGACTTTTATAGCGAAGTAGGTCTGCGGCGGGTTTTTCCCTTTTTCCCTTCAAACAAATTTCAAGATGTTACTGCTTCCTCATTTTCCTTCAAACAAATTTCAGGATGTTACAGCTTCTCATCTCAGAAGGCTGCCTTTCCAAGTCTGGGCATGAAATTGTTGGAAGATTAGAGAGAATTACATCCAACCACTTTCCCCATCGTTCTGACACTTGGTTGGCAAAGATGGTTTCCTTCATTCTTCAAGTTTCTTTTACACACGCTTAAATAACTATTTGTAGCACCCCAAGCCTACCGCTAGCAGATATTATCCTCTTTGGACTTTCCCTTTCGGGCTTCCCCTCAAGGCTTTGAAACGTGTCTGCTAGGGAAAGGTTTCCACACCCTTATAAAGGGTGTTTCGTTCTCCTCCCCAACCAATGTGGGATATCACAGTCCACCCCCTTCAGGGCCCAGCATCCTCGTTGGCACTCGTTCTTTTCTCCAATCGATGTGGGTAGTAGTGATATCAAGATAAAGGTAAGGTCAGATTGTCCACCTATCGCCTTAGTCAGGTAGTACTTGACTCTTGTCTTTCCTGAGCCTGAGGCTGGAGAACGAGTCAGGCGAAGCCCTTTCCTTCCCTTTACTTACTGACGGGCTTGCTTGCCTTTAGGTAAGGGAATAGTCCAACTTTCGACCCTATATTGGCTTCCAGTACTTTCTATTCCCGATAACAAGGTAATGCTCTTTTCCTAAAGCGCTTGTTCCGCTAGGGCCCTCTTCTGTTCCTATATAAGAGGATAACAGTCCGTTATTCTATGGCTGGCTTCGGGAGGCTCCTTTAAAAAGAGTAGTTGACCCGTGATCTACGGAAAGGCTGCTTAAAGTACGTACACACAAGCAAGAGAGAGAACACAAGTGGTACGTAAGAGCAAACTGTCTTATTGGCTATTACCGAATCGAAAGTGCTTAAACCTCTCCTCTTTTTGTCAGTCTACTTTACTGACTGAAAAACGGGAAGTCACTCATTCAAACCTCTCGCCCTCTCCAGTCAGGCATGTTTTCACCGGCGTTGAATTTGAAGCCCTCGGCGGAAGGCTTGGTAGAACAACAACTGGGTCTGGAACTCCAAGACAAAGCTAGAATAGCCATTGGGGTAAAGAGAATTAACCCCATCATGTATTCGATTCTTCTTTCACGAGGTAAAGCTGCTTCGCGATTCTCTGTCTCCTTACGCCTCCCCCACCAAATCCAACCTCTTTCGGGTCCCAGCGTCCTTACTAGTACACCGTCTCGTGTCTACCCCCTTTCGGGGAACAATCTCCTCGCTGGCACATCACGCGGTGTCTGACTTTGATACCATTTGTAACGGCCCGGGCCCACAGCTAGCAGATATTATCCTCTTTGGGGTTTCCTTTTCTGGCTTCCCCTCACGGCTTTAAAACACGTCTGCGAGGGAAAGGTTTCCACACTATTATAAAGGATGTTTCGTTCTCCTCTCCAACCATATCACACTATTCTTGTTTTTCCTCTCTTCTAAAAAGTTGGTGGAGAGCAAACCCGCCCGTTGGCTAGCTGGGCCATGGTTTTAATCAGAAGCTTAAAGCATTCAAAAGTTTTCAAGGATTGGAATGTAAACACTTTTTGGCAGTTCACTGCGAACAAAACATCTCTTTAAAAAAGCTTGTCTGACATAGATTCTTTGGAAGAATTGGGTTCATTGAAGCCTAGCTATTTCCAGAAAAGGGTTGAAATCAATCTGAACTTCTTTCTATTGCTTCGTCTGAGGAACCTATTTGGCAACAGCGAGGTAAATCACAGTTGTTGAAAGTGGGTGATGGAAATACCTTCTTTTTTTTTTCCCCCATCGTATAATTACTGCCAATATGGCATGGAACACAATTGTTGAGGTGCTTGCTCGGTCGGGTATGAGGTTAGTTACTGACCAGGACATCTAAGATGAGTTTGTGACTTCTATAGAGCTTTATGCACTTGGAAAAGAGGTGGGCACACTATTGTACATTTTATTGGAGTCACAGATTCTTTCTGCTGTTAACGAAATGTTGCACAGACAAAGTCCCTGGGGCTTCACTATTGAACTCCTAAAAAAATCTTGGAACATCCTCGAGATGGACATCGAGAGTGTTCACTGATTTTTTTTTTTTTTTTTTTTTTTTTAGAATGCTATTATCGATGCCAGTGTGTTAATGTGACCTATATCTGTCTTATCCCTAGAAGAATTGATGCTAAATCGGTAGGCCTTTAAGTCTTACTGCTTGCCTTTACAAAATCATTATGAAGGTTCTCTCGAAAAGACTAAAGAAAATGCTTCCATACACTATCTCCGACTACCAATCAGCCTTTGTGTGGCTAATAGATAGACTGTACCTGCATCTTAGATTGCAAATGAGTTTATTGAAAATAGACGTTGCCAGAAGGAACCAGATGTGGTGATCAAATCTGACATTGAAAAGGATTTTGACAAGGTTGGTTAAGACTTTCTAGACCTTATTCTTCAAGCTCAGGGTTTTGGGCATCCTTGGAGGAGGTAGATTAGGGGTTGTATTTCATCAATTAACTTCTCCAACTAACTTCTCCATCATCAACAATGGCTAGCCCTGTGGAATGATCATTGCTTCTACAGGTCTTCGACACGGTGATCCTTTATCACCTTTCCTTTACACCATTGTTATGGATGTTTTTTTTTGTAGAATGTTCTCCCTTGCAGAAAGGAGATGCTTGATTAATGTGTTGGAAGTGGGTAGGACAGACCACTGTTTTTTTCGGTTACTCCCTTACAATTGCGGATGACACTGTTCTTTTTTCATCTCCAGAGGTCTCTCACATTAATTATTTGTTGTATTAAAGAGTTTGAAGAAGCATCCGGGCGTAATATTTATTATCAGAAACCGATTTATGGGGGTTGATCTCGATAATTCTCCTGCGGAATCGTAGGCTACCGAATGGGGTTGCAAAAAGGTTGGTGACCTGCTGTTTATTTGGGTTTACCTTTGAATGGCAAGCCAAATTCTAATTCCTTTTTGCTGTCAATTGTTGAGAAGGTGCAGAAAAGGCTACGATCTTGGGAACCTCATATGTCAAAAGGGGGTTGATGAGACACTTATTCAAGCTACTTCGGCTAATCTCTCCATCTACCATCCATCCCCTTTTCCTATTTACTCAAAATCTTCTGCGTCTATTGAGAGATCTTTTAGGAACTTTTATTGAAGGGAAATTTTCACAACTTAAGATGGGATAAAGTTAAACACCCGTTTGAGGAAGGTGGCCTGGGGATTATTGGCCTAAAACTTAAAAATGTATCCTTAATGTTTGAATCGATTTGGCAATTTCACGAAGAAAAATTTGCTCCACGGAGGAGCGTGCAAACAACTTCTCAACAAGCATCCAACTTCTGGAGTTTTCTCCTTGAAGTTTTTGGTTGGCTTCTTCCCCCTTGATATGCAACTTTTTTTCTCTCATATGATCACTGGTCACCCTTTCAAGAAAGAAAGGAAAATCCTTTGGCTGAATTTTATTTTGGTTTCTTTTTGGTCCATGTGAATACCTCAATTCACCTATTTTTACCGAAAAGGACCTAGACCCACACTCCATACGTACCTCAATGACTTTTTTGGCACTCTCTTTGTGTAAATTGAATGCACGCTTTTGAAACTATAGTTTAACTACTCTCGTGACCAATTGGAAAAGTTTTTTATTTAATTTTCTCTTATGAAATGTTGCTGTTTCTTTTTTTTTTCTTTTTTTTTTTTTTTAATTTTAAAAATTGTATTCGTTAGATTCATAATGAAAGATTGATGAGTGTATATGATGAGTGTTTATACAAATATTTAGCTTTGTTTTTGGAGAGGACACTATTTCCAGTACTTACTCGAGCTTGATTTAAACTGACTCGATCATCAATTACATGCATAATAAGCGAGATTGTCCAAAAAGACTAAATGTGGGCATTAGTGAAAAAAAACACATAACCTATCTTGGCATACATTTTTTCTTCTTTTTTGTAGAAAAAATGCCGAGGATGCAATACAGGGACTGAATGGAACAGTTATTGGCAAGCAAATTGTTCGTCTTTCTTGGGGCCGAAGTACAGGGAGCAAGCAGGTTTGACCACGTGCCTTTTCCTTTTCAATGTTTGCCCATCTTTACTTGTCACTTGTCTTCTTGTGAATATTTTTAGATTATTAGTTTTTAAAACTCAACATATGGCCTATGATCTTTAGAATATAAGTGTAGAAATGAGATTTGATGATAATTAGACACTCCTTGTATACAATATTAGACACATCAACATCTGATGAACCCATGTCAACAACTTTGAATATATGTCGAACATTTATTGGACAAAAGGAATAATGGATTGATTTTAAGTCATATGAACATTGATTTTGAAAATATGTTATATTTATGTCGAATCATCTAGAGAAATATATATTTAGTTTCTTCACACTATGTTCCACTGTTAGATCCTCAGGCATCTTTTTCATTGATCTCTCTAAACGACAATAATCGTAGCTTTTTTCCTCGGTTATATGAACACATTTTGAGGGTACTTTATCTTCAAAAGCCTTCGACGATGAACAGCCACTATTGATTCCTTTTCATATTTCTGAATAGTCTTTATATTATATGTTGGCAGTGGAGAAGTGATTCTAATAACCAATGGAATGGAGGACGTTATGGAGTCCCAGGCTACGGTGGTGGATACGGTGGTTACTACGCAGTACCACAGCAGCAGGACGCAAACACGCAAGCCACAGTTGGCGCAGAGTTAATGGGTCATCTTGCCCCAGCTGCCGCAGTTAATGGCTCATCTTGA

mRNA sequence

ATGAACACGCAGGTTTTCTCGGTTAAGGTCATATGCAATAAGCAAACTGGTCAATCTGAGGGCTATGGATTTGTTGAGTTCTATTCACATGCAACAGCTGATAAAGTGTTGCAGAACTATAATGGTGCTATGATGCCAAACACAGATCTGCCTTTCCGTCTCAATTGGGCAACCTTTAGTGGAAATGATAGGCGACCGGACACTGGTTCTGACCTATCTATATTTGTTGGTGATTTGGCTGCTGATGTAACTGATGCTATGCTGCAAGAAACTTTCTCTAGTAAATACACATCTGTTAAAGGAGCAAAGGTGGTTATTGATTCAAATTCAGGGCGTTCAAAGGGTTATGGATTTGTCAGGTTTGGTGATGAAAATGAAAAGTCCAGGGCTATGACTGAAATGAATGGGATATATTGTTCAAGTAGACCCATGCGCATTGGTGTTGCAACACCAAAGAAAGCATCTGGATATCAACAAGGTTATTCTTCACAGGCTTTAGTTCTGGCTGGTGGACATGCAAATGGCATGGCTGTTCAGGGACCACAAGATGGCGAGTCGAACAACACGACTATATTTGTTGGCGGCCTTGATTCTGATGTTAGTGATGAAGATCTCAAGCAAACTTTCTCTAAATTTGGTGAGATTGTCTCTGTGAAAATTCCTATTGGAAAGGGATGTGGATTTGTGCAGTTTGCCAACAGAAAAAATGCCGAGGATGCAATACAGGGACTGAATGGAACAGTTATTGGCAAGCAAATTGTTCGTCTTTCTTGGGGCCGAAGTACAGGGAGCAAGCAGTGGAGAAGTGATTCTAATAACCAATGGAATGGAGGACGTTATGGAGTCCCAGGCTACGGTGGTGGATACGGTGGTTACTACGCAGTACCACAGCAGCAGGACGCAAACACGCAAGCCACAGTTGGCGCAGAGTTAATGGGTCATCTTGCCCCAGCTGCCGCAGTTAATGGCTCATCTTGA

Coding sequence (CDS)

ATGAACACGCAGGTTTTCTCGGTTAAGGTCATATGCAATAAGCAAACTGGTCAATCTGAGGGCTATGGATTTGTTGAGTTCTATTCACATGCAACAGCTGATAAAGTGTTGCAGAACTATAATGGTGCTATGATGCCAAACACAGATCTGCCTTTCCGTCTCAATTGGGCAACCTTTAGTGGAAATGATAGGCGACCGGACACTGGTTCTGACCTATCTATATTTGTTGGTGATTTGGCTGCTGATGTAACTGATGCTATGCTGCAAGAAACTTTCTCTAGTAAATACACATCTGTTAAAGGAGCAAAGGTGGTTATTGATTCAAATTCAGGGCGTTCAAAGGGTTATGGATTTGTCAGGTTTGGTGATGAAAATGAAAAGTCCAGGGCTATGACTGAAATGAATGGGATATATTGTTCAAGTAGACCCATGCGCATTGGTGTTGCAACACCAAAGAAAGCATCTGGATATCAACAAGGTTATTCTTCACAGGCTTTAGTTCTGGCTGGTGGACATGCAAATGGCATGGCTGTTCAGGGACCACAAGATGGCGAGTCGAACAACACGACTATATTTGTTGGCGGCCTTGATTCTGATGTTAGTGATGAAGATCTCAAGCAAACTTTCTCTAAATTTGGTGAGATTGTCTCTGTGAAAATTCCTATTGGAAAGGGATGTGGATTTGTGCAGTTTGCCAACAGAAAAAATGCCGAGGATGCAATACAGGGACTGAATGGAACAGTTATTGGCAAGCAAATTGTTCGTCTTTCTTGGGGCCGAAGTACAGGGAGCAAGCAGTGGAGAAGTGATTCTAATAACCAATGGAATGGAGGACGTTATGGAGTCCCAGGCTACGGTGGTGGATACGGTGGTTACTACGCAGTACCACAGCAGCAGGACGCAAACACGCAAGCCACAGTTGGCGCAGAGTTAATGGGTCATCTTGCCCCAGCTGCCGCAGTTAATGGCTCATCTTGA

Protein sequence

MNTQVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFSGNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGPQDGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQGLNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGYYAVPQQQDANTQATVGAELMGHLAPAAAVNGSS

Homology

[Close]

BLAST of Csor.00g071140 vs. ExPASy Swiss-Prot
Match: Q9LEB3 (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP47 PE=1 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 3.3e-114
Identity = 209/308 (67.86%), Postives = 257/308 (83.44%), Query Frame = 0


Query: 4   QVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFSGND 63
           +V SVK+I NKQTGQSE YGFVEF +HA A+KVLQ+YNG MMPNT+ PFRLNWA FS  +
Sbjct: 109 EVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQSYNGTMMPNTEQPFRLNWAGFSTGE 168

Query: 64  RRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGD 123
           +R +TGSD SIFVGDLA+DVTD ML++TF+S+Y S+KGAKVV+D+N+G SKGYGFVRFGD
Sbjct: 169 KRAETGSDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGD 228

Query: 124 ENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHA-NGMAVQGPQ 183
           E+E+SRAMTEMNG+YCSSR MRIGVATPKK S ++Q YSSQA++L+GG+A NG A  G Q
Sbjct: 229 ESERSRAMTEMNGVYCSSRAMRIGVATPKKPSAHEQ-YSSQAVILSGGYASNGAATHGSQ 288

Query: 184 -DGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAI 243
            DG+S+NTTIFVGGLDS+V+DE+L+Q+F++FGE+VSVKIP GKGCGFVQF++R +A++AI
Sbjct: 289 SDGDSSNTTIFVGGLDSEVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAI 348

Query: 244 QGLNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGYYAVPQQQDA 303
           Q L+G +IGKQ VRLSWGRS  +KQ R+DS +QWNGG  G   Y GGYG  Y   Q QD+
Sbjct: 349 QKLSGAIIGKQAVRLSWGRSPANKQMRTDSGSQWNGGYNGRQNY-GGYG--YGASQNQDS 408

Query: 304 NTQATVGA 310
              AT  A
Sbjct: 409 GMYATGAA 412

[Close]

BLAST of Csor.00g071140 vs. ExPASy Swiss-Prot
Match: F4I3B3 (Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A PE=2 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 9.3e-109
Identity = 206/311 (66.24%), Postives = 241/311 (77.49%), Query Frame = 0


Query: 4   QVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFS-GN 63
           +V SVKVI NKQT QSEGYGFVEF S + A++ LQ+++G  MPN + PFRLNWA+FS G 
Sbjct: 144 EVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGE 203

Query: 64  DRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFG 123
            R  + G DLSIFVGDLA DV+DA+L ETF+ +Y SVKGAKVVIDSN+GRSKGYGFVRFG
Sbjct: 204 KRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFG 263

Query: 124 DENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGPQ 183
           DENE+SRAMTEMNG +CSSR MR+G+ATPK+A+ Y Q   SQAL LAGGH    ++    
Sbjct: 264 DENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSM---S 323

Query: 184 DGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQ 243
           DGESNN+TIFVGGLD+DV++EDL Q FS FGE+VSVKIP+GKGCGFVQFANR++AE+AI 
Sbjct: 324 DGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIG 383

Query: 244 GLNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGYYAVPQQQDAN 303
            LNGTVIGK  VRLSWGRS  +KQWRSDS NQWNGG     GY  GY         QD+N
Sbjct: 384 NLNGTVIGKNTVRLSWGRSP-NKQWRSDSGNQWNGGYSRGQGYNNGYA-------NQDSN 443

Query: 304 TQATVGAELMG 314
             AT  A + G
Sbjct: 444 MYATAAAAVPG 443

[Close]

BLAST of Csor.00g071140 vs. ExPASy Swiss-Prot
Match: Q0WW84 (Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B PE=1 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 1.2e-108
Identity = 203/295 (68.81%), Postives = 239/295 (81.02%), Query Frame = 0


Query: 4   QVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFS-GN 63
           +V SVKVI NK T QSEGYGFVEF S A A++VLQNY+G++MPN+D PFR+NWA+FS G 
Sbjct: 133 EVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSDQPFRINWASFSTGE 192

Query: 64  DRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFG 123
            R  + G DLS+FVGDL+ DVTD +L ETFS +Y SVK AKVVIDSN+GRSKGYGFVRFG
Sbjct: 193 KRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFG 252

Query: 124 DENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGH-ANGMAVQGP 183
           DENE+SRA+TEMNG YCS+R MR+G+ATPK+A   QQ +SSQA++LAGGH +NG    G 
Sbjct: 253 DENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGS 312

Query: 184 Q-DGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDA 243
           Q DGES N TIFVGG+D DV DEDL+Q FS+FGE+VSVKIP+GKGCGFVQFA+RK+AEDA
Sbjct: 313 QSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDA 372

Query: 244 IQGLNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGY--GGGYGGYY 294
           I+ LNGTVIGK  VRLSWGRS  +KQWR DS  QWNGG     GY  GGGY  ++
Sbjct: 373 IESLNGTVIGKNTVRLSWGRSP-NKQWRGDSGQQWNGGYSRGHGYNNGGGYANHH 426

[Close]

BLAST of Csor.00g071140 vs. ExPASy Swiss-Prot
Match: Q9SX80 (Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C' PE=2 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 1.1e-98
Identity = 194/296 (65.54%), Postives = 223/296 (75.34%), Query Frame = 0


Query: 4   QVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFS-GN 63
           ++ S+KVI NK  G SEGYGFVEF SH  ADKVLQ +NGA MPNTD PFRLNWA+FS G 
Sbjct: 130 EIVSLKVIRNKHNGSSEGYGFVEFESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTGE 189

Query: 64  DRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFG 123
            R  + G DLSIFVGDLA DV+DA+L ETFS KY SVK AKVV+D+N+GRSKGYGFVRFG
Sbjct: 190 KRLENNGPDLSIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFG 249

Query: 124 DENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGPQ 183
           DENE+++AMTEMNG+ CSSR MRIG ATP+K +GYQQ          GG+    A     
Sbjct: 250 DENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQ---------QGGYMPSGAFT-RS 309

Query: 184 DGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQ 243
           +G++ NTTIFVGGLDS V+DEDLKQ FS+FGEIVSVKIP+GKGCGFVQF NR NAE+A++
Sbjct: 310 EGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALE 369

Query: 244 GLNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGY-YAVPQ 298
            LNGTVIGKQ VRLSWGR+  +KQ R    NQW    YG    G  Y GY Y VPQ
Sbjct: 370 KLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYYG----GQFYNGYGYMVPQ 411

[Close]

BLAST of Csor.00g071140 vs. ExPASy Swiss-Prot
Match: Q9SX79 (Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C PE=2 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 1.1e-96
Identity = 190/296 (64.19%), Postives = 221/296 (74.66%), Query Frame = 0


Query: 4   QVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFS-GN 63
           ++ SVKVI NK  G SEGYGFVEF SH  ADKVL+ +NG  MPNTD PFRLNWA+FS G 
Sbjct: 128 EIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNWASFSTGE 187

Query: 64  DRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFG 123
            R  + G DLSIFVGDL+ DV+D +L ETFS KY SVK AKVV+D+N+GRSKGYGFVRFG
Sbjct: 188 KRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFG 247

Query: 124 DENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGPQ 183
           DENE+++AMTEMNG+ CSSR MRIG ATP+K +GYQQ          GG+     +  P 
Sbjct: 248 DENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQ---------QGGYMPNGTLTRP- 307

Query: 184 DGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQ 243
           +G+  NTTIFVGGLDS V+DEDLKQ F++FGEIVSVKIP+GKGCGFVQF NR NAE+A++
Sbjct: 308 EGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALE 367

Query: 244 GLNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGY-YAVPQ 298
            LNGTVIGKQ VRLSWGR+  +KQ R    NQW    YG    G  Y GY Y VPQ
Sbjct: 368 KLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYYG----GQFYNGYGYMVPQ 409

[Close]

BLAST of Csor.00g071140 vs. NCBI nr
Match: KAG6605129.1 (Polyadenylate-binding protein RBP47, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 648 bits (1672), Expect = 1.33e-234
Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 0


Query: 1   MNTQVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFS 60
           MNTQVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFS
Sbjct: 1   MNTQVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFS 60

Query: 61  GNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVR 120
           GNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVR
Sbjct: 61  GNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVR 120

Query: 121 FGDENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQG 180
           FGDENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQG
Sbjct: 121 FGDENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQG 180

Query: 181 PQDGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDA 240
           PQDGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDA
Sbjct: 181 PQDGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDA 240

Query: 241 IQGLNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGYYAVPQQQD 300
           IQGLNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGYYAVPQQQD
Sbjct: 241 IQGLNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGYYAVPQQQD 300

Query: 301 ANTQATVGAELMGHLAPAAAVNGSS 325
           ANTQATVGAELMGHLAPAAAVNGSS
Sbjct: 301 ANTQATVGAELMGHLAPAAAVNGSS 325

[Close]

BLAST of Csor.00g071140 vs. NCBI nr
Match: XP_022947439.1 (polyadenylate-binding protein RBP47-like [Cucurbita moschata])

HSP 1 Score: 639 bits (1647), Expect = 7.85e-229
Identity = 320/322 (99.38%), Postives = 321/322 (99.69%), Query Frame = 0


Query: 4   QVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFSGND 63
           +VFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFSGND
Sbjct: 126 EVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFSGND 185

Query: 64  RRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGD 123
           RRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGD
Sbjct: 186 RRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGD 245

Query: 124 ENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGPQD 183
           ENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGPQD
Sbjct: 246 ENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGPQD 305

Query: 184 GESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQG 243
           GESNNTTIFVGGLDSDVSDEDLKQ FSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQG
Sbjct: 306 GESNNTTIFVGGLDSDVSDEDLKQPFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQG 365

Query: 244 LNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGYYAVPQQQDANT 303
           LNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGYYAVPQQQDANT
Sbjct: 366 LNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGYYAVPQQQDANT 425

Query: 304 QATVGAELMGHLAPAAAVNGSS 325
           QATVGAELMGHLAPAAAVNGSS
Sbjct: 426 QATVGAELMGHLAPAAAVNGSS 447

[Close]

BLAST of Csor.00g071140 vs. NCBI nr
Match: XP_023533349.1 (polyadenylate-binding protein RBP47 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 636 bits (1640), Expect = 8.81e-228
Identity = 318/322 (98.76%), Postives = 321/322 (99.69%), Query Frame = 0


Query: 4   QVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFSGND 63
           +VFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFSGND
Sbjct: 125 EVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFSGND 184

Query: 64  RRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGD 123
           RRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGD
Sbjct: 185 RRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGD 244

Query: 124 ENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGPQD 183
           ENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGPQD
Sbjct: 245 ENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGPQD 304

Query: 184 GESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQG 243
           GESNNTTIFVGGLDSDVSDEDLKQ FSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQG
Sbjct: 305 GESNNTTIFVGGLDSDVSDEDLKQPFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQG 364

Query: 244 LNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGYYAVPQQQDANT 303
           LNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGYY+VPQQQ+ANT
Sbjct: 365 LNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGYYSVPQQQEANT 424

Query: 304 QATVGAELMGHLAPAAAVNGSS 325
           QATVGAELMGHLAPAAAVNGSS
Sbjct: 425 QATVGAELMGHLAPAAAVNGSS 446

[Close]

BLAST of Csor.00g071140 vs. NCBI nr
Match: XP_023007482.1 (polyadenylate-binding protein RBP47-like [Cucurbita maxima])

HSP 1 Score: 633 bits (1632), Expect = 1.75e-226
Identity = 319/323 (98.76%), Postives = 321/323 (99.38%), Query Frame = 0


Query: 4   QVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFSGND 63
           +VFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFSGND
Sbjct: 129 EVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFSGND 188

Query: 64  RRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGD 123
           RRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGD
Sbjct: 189 RRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGD 248

Query: 124 ENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGPQ- 183
           ENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGPQ 
Sbjct: 249 ENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGPQS 308

Query: 184 DGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQ 243
           DGESNNTTIFVGGLDSDVSDEDLKQ FSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQ
Sbjct: 309 DGESNNTTIFVGGLDSDVSDEDLKQPFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQ 368

Query: 244 GLNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGYYAVPQQQDAN 303
           GLNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGYY+VPQQQDAN
Sbjct: 369 GLNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGYYSVPQQQDAN 428

Query: 304 TQATVGAELMGHLAPAAAVNGSS 325
           TQATVGAELMGHLAPAAAVNGSS
Sbjct: 429 TQATVGAELMGHLAPAAAVNGSS 451

[Close]

BLAST of Csor.00g071140 vs. NCBI nr
Match: XP_022986538.1 (polyadenylate-binding protein RBP47-like [Cucurbita maxima])

HSP 1 Score: 564 bits (1453), Expect = 1.50e-199
Identity = 288/323 (89.16%), Postives = 300/323 (92.88%), Query Frame = 0


Query: 4   QVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFSGND 63
           +VFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGA+MPNTDLPFRLNWATFSG+D
Sbjct: 121 EVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTDLPFRLNWATFSGSD 180

Query: 64  RRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGD 123
           RRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGD
Sbjct: 181 RRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGD 240

Query: 124 ENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGPQ- 183
           E+E++RA+TEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQG Q 
Sbjct: 241 ESERTRAVTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGSQS 300

Query: 184 DGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQ 243
           DGESNNTTIFVGGLDSDVSDEDL+Q FSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQ
Sbjct: 301 DGESNNTTIFVGGLDSDVSDEDLRQPFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQ 360

Query: 244 GLNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGYYAVPQQQDAN 303
           GLNGTVIGKQ VRLSWGRSTG+KQWR DSNNQWNGGRYG  GYGG YGGYY++PQ QDAN
Sbjct: 361 GLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQGYGG-YGGYYSIPQHQDAN 420

Query: 304 TQATVGAELMGHLAPAAAVNGSS 325
             A            AAAVNG+S
Sbjct: 421 MHAA-----------AAAVNGTS 431

[Close]

BLAST of Csor.00g071140 vs. ExPASy TrEMBL
Match: A0A6J1G6T8 (polyadenylate-binding protein RBP47-like OS=Cucurbita moschata OX=3662 GN=LOC111451298 PE=4 SV=1)

HSP 1 Score: 639 bits (1647), Expect = 3.80e-229
Identity = 320/322 (99.38%), Postives = 321/322 (99.69%), Query Frame = 0


Query: 4   QVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFSGND 63
           +VFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFSGND
Sbjct: 126 EVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFSGND 185

Query: 64  RRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGD 123
           RRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGD
Sbjct: 186 RRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGD 245

Query: 124 ENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGPQD 183
           ENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGPQD
Sbjct: 246 ENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGPQD 305

Query: 184 GESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQG 243
           GESNNTTIFVGGLDSDVSDEDLKQ FSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQG
Sbjct: 306 GESNNTTIFVGGLDSDVSDEDLKQPFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQG 365

Query: 244 LNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGYYAVPQQQDANT 303
           LNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGYYAVPQQQDANT
Sbjct: 366 LNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGYYAVPQQQDANT 425

Query: 304 QATVGAELMGHLAPAAAVNGSS 325
           QATVGAELMGHLAPAAAVNGSS
Sbjct: 426 QATVGAELMGHLAPAAAVNGSS 447

[Close]

BLAST of Csor.00g071140 vs. ExPASy TrEMBL
Match: A0A6J1KYU5 (polyadenylate-binding protein RBP47-like OS=Cucurbita maxima OX=3661 GN=LOC111499959 PE=4 SV=1)

HSP 1 Score: 633 bits (1632), Expect = 8.45e-227
Identity = 319/323 (98.76%), Postives = 321/323 (99.38%), Query Frame = 0


Query: 4   QVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFSGND 63
           +VFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFSGND
Sbjct: 129 EVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFSGND 188

Query: 64  RRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGD 123
           RRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGD
Sbjct: 189 RRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGD 248

Query: 124 ENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGPQ- 183
           ENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGPQ 
Sbjct: 249 ENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGPQS 308

Query: 184 DGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQ 243
           DGESNNTTIFVGGLDSDVSDEDLKQ FSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQ
Sbjct: 309 DGESNNTTIFVGGLDSDVSDEDLKQPFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQ 368

Query: 244 GLNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGYYAVPQQQDAN 303
           GLNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGYY+VPQQQDAN
Sbjct: 369 GLNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGYYSVPQQQDAN 428

Query: 304 TQATVGAELMGHLAPAAAVNGSS 325
           TQATVGAELMGHLAPAAAVNGSS
Sbjct: 429 TQATVGAELMGHLAPAAAVNGSS 451

[Close]

BLAST of Csor.00g071140 vs. ExPASy TrEMBL
Match: A0A6J1JGT7 (polyadenylate-binding protein RBP47-like OS=Cucurbita maxima OX=3661 GN=LOC111484248 PE=4 SV=1)

HSP 1 Score: 564 bits (1453), Expect = 7.25e-200
Identity = 288/323 (89.16%), Postives = 300/323 (92.88%), Query Frame = 0


Query: 4   QVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFSGND 63
           +VFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGA+MPNTDLPFRLNWATFSG+D
Sbjct: 121 EVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTDLPFRLNWATFSGSD 180

Query: 64  RRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGD 123
           RRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGD
Sbjct: 181 RRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGD 240

Query: 124 ENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGPQ- 183
           E+E++RA+TEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQG Q 
Sbjct: 241 ESERTRAVTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGSQS 300

Query: 184 DGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQ 243
           DGESNNTTIFVGGLDSDVSDEDL+Q FSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQ
Sbjct: 301 DGESNNTTIFVGGLDSDVSDEDLRQPFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQ 360

Query: 244 GLNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGYYAVPQQQDAN 303
           GLNGTVIGKQ VRLSWGRSTG+KQWR DSNNQWNGGRYG  GYGG YGGYY++PQ QDAN
Sbjct: 361 GLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQGYGG-YGGYYSIPQHQDAN 420

Query: 304 TQATVGAELMGHLAPAAAVNGSS 325
             A            AAAVNG+S
Sbjct: 421 MHAA-----------AAAVNGTS 431

[Close]

BLAST of Csor.00g071140 vs. ExPASy TrEMBL
Match: A0A6J1D3C6 (polyadenylate-binding protein RBP47 OS=Momordica charantia OX=3673 GN=LOC111017220 PE=4 SV=1)

HSP 1 Score: 560 bits (1443), Expect = 2.50e-198
Identity = 280/311 (90.03%), Postives = 293/311 (94.21%), Query Frame = 0


Query: 4   QVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFSGND 63
           +VFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGA+MPNT+LPFRLNWATFS  D
Sbjct: 121 EVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTELPFRLNWATFSATD 180

Query: 64  RRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGD 123
           RRPDTGSDLSIFVGDLAADVTDAMLQETFSS++TSVKGAKVVIDSNSGRSKGYGFVRFGD
Sbjct: 181 RRPDTGSDLSIFVGDLAADVTDAMLQETFSSRFTSVKGAKVVIDSNSGRSKGYGFVRFGD 240

Query: 124 ENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGPQ- 183
           ENE++RAMTEMNG+YCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQG Q 
Sbjct: 241 ENERTRAMTEMNGVYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGSQP 300

Query: 184 DGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQ 243
           DGESNNTTIFVGGLDSDVSDEDL+Q FSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQ
Sbjct: 301 DGESNNTTIFVGGLDSDVSDEDLRQPFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQ 360

Query: 244 GLNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGYYAVPQQQDAN 303
           GLNGTVIGKQ +RLSWGRSTG+KQWR DSNNQWNGGRYG  GYGG Y GYY+VPQ QD N
Sbjct: 361 GLNGTVIGKQTIRLSWGRSTGNKQWRGDSNNQWNGGRYGGQGYGG-YSGYYSVPQHQDTN 420

Query: 304 TQATVGAELMG 313
             AT  AE+ G
Sbjct: 421 MNATAAAEVNG 430

[Close]

BLAST of Csor.00g071140 vs. ExPASy TrEMBL
Match: A0A6J1FUF1 (polyadenylate-binding protein RBP47-like OS=Cucurbita moschata OX=3662 GN=LOC111448515 PE=4 SV=1)

HSP 1 Score: 559 bits (1440), Expect = 6.42e-198
Identity = 288/323 (89.16%), Postives = 299/323 (92.57%), Query Frame = 0


Query: 4   QVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFSGND 63
           +VFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGA+MPNTDLPFRLNWATFSG+D
Sbjct: 120 EVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTDLPFRLNWATFSGSD 179

Query: 64  RRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGD 123
           RRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGD
Sbjct: 180 RRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGD 239

Query: 124 ENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGPQ- 183
           E+E++RA+TEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQG Q 
Sbjct: 240 ESERTRAVTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGSQS 299

Query: 184 DGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQ 243
           DGESNNTTIFVGGLDSDVSDEDL+Q FSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQ
Sbjct: 300 DGESNNTTIFVGGLDSDVSDEDLRQPFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQ 359

Query: 244 GLNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGYYAVPQQQDAN 303
           GLNGTVIGKQ VRLSWGRSTG+KQWR DSNNQWNGGRYG  GYGG YGGYY +PQ QDAN
Sbjct: 360 GLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQGYGG-YGGYY-IPQHQDAN 419

Query: 304 TQATVGAELMGHLAPAAAVNGSS 325
             A            AAAVNG+S
Sbjct: 420 MHAA-----------AAAVNGTS 429

[Close]

BLAST of Csor.00g071140 vs. TAIR 10
Match: AT1G49600.1 (RNA-binding protein 47A )

HSP 1 Score: 394.8 bits (1013), Expect = 6.6e-110
Identity = 206/311 (66.24%), Postives = 241/311 (77.49%), Query Frame = 0


Query: 4   QVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFS-GN 63
           +V SVKVI NKQT QSEGYGFVEF S + A++ LQ+++G  MPN + PFRLNWA+FS G 
Sbjct: 144 EVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGE 203

Query: 64  DRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFG 123
            R  + G DLSIFVGDLA DV+DA+L ETF+ +Y SVKGAKVVIDSN+GRSKGYGFVRFG
Sbjct: 204 KRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFG 263

Query: 124 DENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGPQ 183
           DENE+SRAMTEMNG +CSSR MR+G+ATPK+A+ Y Q   SQAL LAGGH    ++    
Sbjct: 264 DENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSM---S 323

Query: 184 DGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQ 243
           DGESNN+TIFVGGLD+DV++EDL Q FS FGE+VSVKIP+GKGCGFVQFANR++AE+AI 
Sbjct: 324 DGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIG 383

Query: 244 GLNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGYYAVPQQQDAN 303
            LNGTVIGK  VRLSWGRS  +KQWRSDS NQWNGG     GY  GY         QD+N
Sbjct: 384 NLNGTVIGKNTVRLSWGRSP-NKQWRSDSGNQWNGGYSRGQGYNNGYA-------NQDSN 443

Query: 304 TQATVGAELMG 314
             AT  A + G
Sbjct: 444 MYATAAAAVPG 443

[Close]

BLAST of Csor.00g071140 vs. TAIR 10
Match: AT3G19130.1 (RNA-binding protein 47B )

HSP 1 Score: 394.4 bits (1012), Expect = 8.7e-110
Identity = 203/295 (68.81%), Postives = 239/295 (81.02%), Query Frame = 0


Query: 4   QVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFS-GN 63
           +V SVKVI NK T QSEGYGFVEF S A A++VLQNY+G++MPN+D PFR+NWA+FS G 
Sbjct: 133 EVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSDQPFRINWASFSTGE 192

Query: 64  DRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFG 123
            R  + G DLS+FVGDL+ DVTD +L ETFS +Y SVK AKVVIDSN+GRSKGYGFVRFG
Sbjct: 193 KRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFG 252

Query: 124 DENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGH-ANGMAVQGP 183
           DENE+SRA+TEMNG YCS+R MR+G+ATPK+A   QQ +SSQA++LAGGH +NG    G 
Sbjct: 253 DENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGS 312

Query: 184 Q-DGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDA 243
           Q DGES N TIFVGG+D DV DEDL+Q FS+FGE+VSVKIP+GKGCGFVQFA+RK+AEDA
Sbjct: 313 QSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDA 372

Query: 244 IQGLNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGY--GGGYGGYY 294
           I+ LNGTVIGK  VRLSWGRS  +KQWR DS  QWNGG     GY  GGGY  ++
Sbjct: 373 IESLNGTVIGKNTVRLSWGRSP-NKQWRGDSGQQWNGGYSRGHGYNNGGGYANHH 426

[Close]

BLAST of Csor.00g071140 vs. TAIR 10
Match: AT1G47500.1 (RNA-binding protein 47C' )

HSP 1 Score: 361.3 bits (926), Expect = 8.1e-100
Identity = 194/296 (65.54%), Postives = 223/296 (75.34%), Query Frame = 0


Query: 4   QVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFS-GN 63
           ++ S+KVI NK  G SEGYGFVEF SH  ADKVLQ +NGA MPNTD PFRLNWA+FS G 
Sbjct: 130 EIVSLKVIRNKHNGSSEGYGFVEFESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTGE 189

Query: 64  DRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFG 123
            R  + G DLSIFVGDLA DV+DA+L ETFS KY SVK AKVV+D+N+GRSKGYGFVRFG
Sbjct: 190 KRLENNGPDLSIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFG 249

Query: 124 DENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGPQ 183
           DENE+++AMTEMNG+ CSSR MRIG ATP+K +GYQQ          GG+    A     
Sbjct: 250 DENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQ---------QGGYMPSGAFT-RS 309

Query: 184 DGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQ 243
           +G++ NTTIFVGGLDS V+DEDLKQ FS+FGEIVSVKIP+GKGCGFVQF NR NAE+A++
Sbjct: 310 EGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALE 369

Query: 244 GLNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGY-YAVPQ 298
            LNGTVIGKQ VRLSWGR+  +KQ R    NQW    YG    G  Y GY Y VPQ
Sbjct: 370 KLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYYG----GQFYNGYGYMVPQ 411

[Close]

BLAST of Csor.00g071140 vs. TAIR 10
Match: AT1G47490.1 (RNA-binding protein 47C )

HSP 1 Score: 354.8 bits (909), Expect = 7.6e-98
Identity = 190/296 (64.19%), Postives = 221/296 (74.66%), Query Frame = 0


Query: 4   QVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFS-GN 63
           ++ SVKVI NK  G SEGYGFVEF SH  ADKVL+ +NG  MPNTD PFRLNWA+FS G 
Sbjct: 128 EIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNWASFSTGE 187

Query: 64  DRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFG 123
            R  + G DLSIFVGDL+ DV+D +L ETFS KY SVK AKVV+D+N+GRSKGYGFVRFG
Sbjct: 188 KRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFG 247

Query: 124 DENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGPQ 183
           DENE+++AMTEMNG+ CSSR MRIG ATP+K +GYQQ          GG+     +  P 
Sbjct: 248 DENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQ---------QGGYMPNGTLTRP- 307

Query: 184 DGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQ 243
           +G+  NTTIFVGGLDS V+DEDLKQ F++FGEIVSVKIP+GKGCGFVQF NR NAE+A++
Sbjct: 308 EGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALE 367

Query: 244 GLNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGYGGY-YAVPQ 298
            LNGTVIGKQ VRLSWGR+  +KQ R    NQW    YG    G  Y GY Y VPQ
Sbjct: 368 KLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYYG----GQFYNGYGYMVPQ 409

[Close]

BLAST of Csor.00g071140 vs. TAIR 10
Match: AT5G19350.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 306.6 bits (784), Expect = 2.4e-83
Identity = 163/306 (53.27%), Postives = 211/306 (68.95%), Query Frame = 0


Query: 4   QVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFSGND 63
           ++ SVKVI NK TGQ EGYGF+EF SHA A++ LQ YNG  MP T+L FRLNWA+F G+ 
Sbjct: 49  ELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQTYNGTQMPGTELTFRLNWASF-GSG 108

Query: 64  RRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGD 123
           ++ D G D SIFVGDLA DVTD +LQETF   Y+SV+GAKVV D ++GRSKGYGFV+F +
Sbjct: 109 QKVDAGPDHSIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAE 168

Query: 124 ENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGPQD 183
           E+E++RAM EMNG+YCS+RPMRI  ATPKK  G QQ Y ++  V +   A   A   P +
Sbjct: 169 ESERNRAMAEMNGLYCSTRPMRISAATPKKNVGVQQQYVTKVTVPSAVAAPVQAYVAPPE 228

Query: 184 GESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQG 243
            +   TTI V  LD +V++E+LK+ FS+ GE++ VKIP  KG G+VQF  R +AE+A+Q 
Sbjct: 229 SDVTCTTISVANLDQNVTEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQR 288

Query: 244 LNGTVIGKQIVRLSWGRSTGSKQWRSDSN-NQWNGGRYGVPGYGGGYGGYYAVPQQQDAN 303
           + G VIG+Q VR+SW ++ G   W + ++ NQWN    G  GYG GY   YA    QD +
Sbjct: 289 MQGQVIGQQAVRISWSKNPGQDGWVTQADPNQWN----GYYGYGQGYDA-YAYGATQDPS 348

Query: 304 TQATVG 309
             A  G
Sbjct: 349 VYAYGG 348

The following BLAST results are available for this feature:

BLAST of Csor.00g071140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LEB3	3.3e-114	67.86	Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
F4I3B3	9.3e-109	66.24	Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A P...	[more]
Q0WW84	1.2e-108	68.81	Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B P...	[more]
Q9SX80	1.1e-98	65.54	Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C'...	[more]
Q9SX79	1.1e-96	64.19	Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C P...	[more]

BLAST of Csor.00g071140 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605129.1	1.33e-234	100.00	Polyadenylate-binding protein RBP47, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022947439.1	7.85e-229	99.38	polyadenylate-binding protein RBP47-like [Cucurbita moschata]	[more]
XP_023533349.1	8.81e-228	98.76	polyadenylate-binding protein RBP47 [Cucurbita pepo subsp. pepo]	[more]
XP_023007482.1	1.75e-226	98.76	polyadenylate-binding protein RBP47-like [Cucurbita maxima]	[more]
XP_022986538.1	1.50e-199	89.16	polyadenylate-binding protein RBP47-like [Cucurbita maxima]	[more]

BLAST of Csor.00g071140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G6T8	3.80e-229	99.38	polyadenylate-binding protein RBP47-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1KYU5	8.45e-227	98.76	polyadenylate-binding protein RBP47-like OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1JGT7	7.25e-200	89.16	polyadenylate-binding protein RBP47-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1D3C6	2.50e-198	90.03	polyadenylate-binding protein RBP47 OS=Momordica charantia OX=3673 GN=LOC1110172...	[more]
A0A6J1FUF1	6.42e-198	89.16	polyadenylate-binding protein RBP47-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of Csor.00g071140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49600.1	6.6e-110	66.24	RNA-binding protein 47A	[more]
AT3G19130.1	8.7e-110	68.81	RNA-binding protein 47B	[more]
AT1G47500.1	8.1e-100	65.54	RNA-binding protein 47C'	[more]
AT1G47490.1	7.6e-98	64.19	RNA-binding protein 47C	[more]
AT5G19350.2	2.4e-83	53.27	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 73..147 e-value: 8.3E-17 score: 71.8 coord: 190..257 e-value: 3.0E-24 score: 96.5
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 74..144 e-value: 3.3E-14 score: 52.5 coord: 7..49 e-value: 1.2E-8 score: 34.6 coord: 191..252 e-value: 1.2E-19 score: 70.0
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 72..151 score: 17.06296
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 1..59 score: 9.251588
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 189..261 score: 18.597946
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..58 e-value: 2.9E-14 score: 54.9
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 172..298 e-value: 4.9E-28 score: 100.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 60..166 e-value: 6.6E-22 score: 79.9
None	No IPR available	PANTHER	PTHR47640:SF9	POLYADENYLATE-BINDING PROTEIN RBP47B	coord: 4..306
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 4..306
None	No IPR available	CDD	cd12344	RRM1_SECp43_like	coord: 5..60 e-value: 1.68914E-25 score: 95.4072
None	No IPR available	CDD	cd12346	RRM3_NGR1_NAM8_like	coord: 188..259 e-value: 8.61319E-38 score: 127.42
None	No IPR available	CDD	cd12345	RRM2_SECp43_like	coord: 71..150 e-value: 3.66192E-47 score: 152.048
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 182..291
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 56..165
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 5..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g071140.m01	Csor.00g071140.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005829	cytosol
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding