Csor.00g069860 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g069860
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RING-H2 finger protein ATL29
Location	Csor_Chr19: 1739723 .. 1740760 (+)
RNA-Seq Expression	Csor.00g069860
Synteny	Csor.00g069860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTTTCCTTATTAATTCTCCTCCTCCTCCTCCATCTCCTCCTCCTCCGCCGTCTCCTCCGCCGCCATCTCCTCCTTCCTCCTCCTCCTCCTTCCTCCTCCATGTCTTTTTCCGGCCAATGTCCACCGATTTCTCCCACTCTTCTTTCTCCCCTGAAGAACACTCCACTCCTCCTCTCACCATTATCCTCACTCTCATCCTCCTCGCCTTCCTCCTCGTCGGCTTCTTCTCCATCTACTTCTGCCGCTGCATCATGGACTCCCTCCTCCATTCCCGCAACCTCCGCCGCTCCCCTTCCGGCAATATCCTCCACCCCTCCGCCGATTCCCCCACCGTCCCTCCCGGCCTCGACCCACTTCTCATAAACACCTTCCCCACCTTCCCATATTCCGGCATCAAGGAATTTCGCAGCGACAAATTCGGATTAGAATGCGCCATTTGCTTACTTGAATTCGACGACGACAGCTTCCTCCGCCTCCTCACTGTCTGCTGCCATGTCTTCCACCAAGAATGCATTGATCTCTGGCTTGAATCCCACAAAACCTGCCCTGTTTGTCGCCGGAATCTCGACTCCGATTCCGCCAGAAACTCCGCCGATAAGCCCCCTGATTCCGATCATGACAACCCACCACGCAGTACCCATCATGAATCAATCGAAGATGCTATTAGTATTGACATTGACGATGACGTCGACGACGATGACAACGCCGACGCCGACGACGACAACGACAATCGCCGGTCTGGTTCGAACAGAGGAAAACAGAGTATAAAAACAGAGGAGGCGGAGGACGACGGTGTCAAGAAATTCTCGAGGTGCCATTCAACGGGGCATTCGATTTTGAAGGCGAGAAGGGAAGATGATGATCGGTATAAGTTGAGATTGCCGGAACATGTAAAGATTAAGATCATTAGAGGGCATAATTGGACGGGGAGTTGTGTGACTTTTGATGAAATTTTACGAAATCCTGGGAATGGTGGTGGGTTCTCGGAGCTATCTGAATCTGATGATCGAATTGATTTGCAGAAGCCGCCATGA

mRNA sequence

ATGACTTTCCTTATTAATTCTCCTCCTCCTCCTCCATCTCCTCCTCCTCCGCCGTCTCCTCCGCCGCCATCTCCTCCTTCCTCCTCCTCCTCCTTCCTCCTCCATGTCTTTTTCCGGCCAATGTCCACCGATTTCTCCCACTCTTCTTTCTCCCCTGAAGAACACTCCACTCCTCCTCTCACCATTATCCTCACTCTCATCCTCCTCGCCTTCCTCCTCGTCGGCTTCTTCTCCATCTACTTCTGCCGCTGCATCATGGACTCCCTCCTCCATTCCCGCAACCTCCGCCGCTCCCCTTCCGGCAATATCCTCCACCCCTCCGCCGATTCCCCCACCGTCCCTCCCGGCCTCGACCCACTTCTCATAAACACCTTCCCCACCTTCCCATATTCCGGCATCAAGGAATTTCGCAGCGACAAATTCGGATTAGAATGCGCCATTTGCTTACTTGAATTCGACGACGACAGCTTCCTCCGCCTCCTCACTGTCTGCTGCCATGTCTTCCACCAAGAATGCATTGATCTCTGGCTTGAATCCCACAAAACCTGCCCTGTTTGTCGCCGGAATCTCGACTCCGATTCCGCCAGAAACTCCGCCGATAAGCCCCCTGATTCCGATCATGACAACCCACCACGCAGTACCCATCATGAATCAATCGAAGATGCTATTAGTATTGACATTGACGATGACGTCGACGACGATGACAACGCCGACGCCGACGACGACAACGACAATCGCCGGTCTGGTTCGAACAGAGGAAAACAGAGTATAAAAACAGAGGAGGCGGAGGACGACGGTGTCAAGAAATTCTCGAGGTGCCATTCAACGGGGCATTCGATTTTGAAGGCGAGAAGGGAAGATGATGATCGGTATAAGTTGAGATTGCCGGAACATGTAAAGATTAAGATCATTAGAGGGCATAATTGGACGGGGAGTTGTGTGACTTTTGATGAAATTTTACGAAATCCTGGGAATGGTGGTGGGTTCTCGGAGCTATCTGAATCTGATGATCGAATTGATTTGCAGAAGCCGCCATGA

Coding sequence (CDS)

ATGACTTTCCTTATTAATTCTCCTCCTCCTCCTCCATCTCCTCCTCCTCCGCCGTCTCCTCCGCCGCCATCTCCTCCTTCCTCCTCCTCCTCCTTCCTCCTCCATGTCTTTTTCCGGCCAATGTCCACCGATTTCTCCCACTCTTCTTTCTCCCCTGAAGAACACTCCACTCCTCCTCTCACCATTATCCTCACTCTCATCCTCCTCGCCTTCCTCCTCGTCGGCTTCTTCTCCATCTACTTCTGCCGCTGCATCATGGACTCCCTCCTCCATTCCCGCAACCTCCGCCGCTCCCCTTCCGGCAATATCCTCCACCCCTCCGCCGATTCCCCCACCGTCCCTCCCGGCCTCGACCCACTTCTCATAAACACCTTCCCCACCTTCCCATATTCCGGCATCAAGGAATTTCGCAGCGACAAATTCGGATTAGAATGCGCCATTTGCTTACTTGAATTCGACGACGACAGCTTCCTCCGCCTCCTCACTGTCTGCTGCCATGTCTTCCACCAAGAATGCATTGATCTCTGGCTTGAATCCCACAAAACCTGCCCTGTTTGTCGCCGGAATCTCGACTCCGATTCCGCCAGAAACTCCGCCGATAAGCCCCCTGATTCCGATCATGACAACCCACCACGCAGTACCCATCATGAATCAATCGAAGATGCTATTAGTATTGACATTGACGATGACGTCGACGACGATGACAACGCCGACGCCGACGACGACAACGACAATCGCCGGTCTGGTTCGAACAGAGGAAAACAGAGTATAAAAACAGAGGAGGCGGAGGACGACGGTGTCAAGAAATTCTCGAGGTGCCATTCAACGGGGCATTCGATTTTGAAGGCGAGAAGGGAAGATGATGATCGGTATAAGTTGAGATTGCCGGAACATGTAAAGATTAAGATCATTAGAGGGCATAATTGGACGGGGAGTTGTGTGACTTTTGATGAAATTTTACGAAATCCTGGGAATGGTGGTGGGTTCTCGGAGCTATCTGAATCTGATGATCGAATTGATTTGCAGAAGCCGCCATGA

Protein sequence

MTFLINSPPPPPSPPPPPSPPPPSPPSSSSSFLLHVFFRPMSTDFSHSSFSPEEHSTPPLTIILTLILLAFLLVGFFSIYFCRCIMDSLLHSRNLRRSPSGNILHPSADSPTVPPGLDPLLINTFPTFPYSGIKEFRSDKFGLECAICLLEFDDDSFLRLLTVCCHVFHQECIDLWLESHKTCPVCRRNLDSDSARNSADKPPDSDHDNPPRSTHHESIEDAISIDIDDDVDDDDNADADDDNDNRRSGSNRGKQSIKTEEAEDDGVKKFSRCHSTGHSILKARREDDDRYKLRLPEHVKIKIIRGHNWTGSCVTFDEILRNPGNGGGFSELSESDDRIDLQKPP

Homology

[Close]

BLAST of Csor.00g069860 vs. ExPASy Swiss-Prot
Match: O49691 (RING-H2 finger protein ATL29 OS=Arabidopsis thaliana OX=3702 GN=ATL29 PE=3 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 2.2e-63
Identity = 140/277 (50.54%), Postives = 181/277 (65.34%), Query Frame = 0


Query: 52  PEEH-STPPLTIILTLILLAFLLVGFFSIYFCRCIMDSLLHSRNLRR---SPSGNILHPS 111
           P++H  TPPLT+ILT+ILL F  +GFF++YFC+C +D+++ +  L     + S N L   
Sbjct: 14  PQQHYVTPPLTVILTVILLVFFFIGFFTLYFCKCFLDTMVQAWRLHHGGDTVSDNPLQ-Q 73

Query: 112 ADSPTVPPGLDPLLINTFPTFPYSGIKEFRSDKFGLECAICLLEFDDDSFLRLLTVCCHV 171
            ++P V PGL+  +IN+FPTFPYS +K+ R +K+GLECAICLLEFD D  LRLLT C HV
Sbjct: 74  PEAPPVNPGLELRIINSFPTFPYSSVKDLREEKYGLECAICLLEFDGDHVLRLLTTCYHV 133

Query: 172 FHQECIDLWLESHKTCPVCRRNLDSDSARNSADKPPDSDHDNPPRSTHHESIEDAISIDI 231
           FHQECIDLW ESH+TCPVCRR+L         D PP  ++  P   T  E I D I    
Sbjct: 134 FHQECIDLWFESHRTCPVCRRDL---------DPPPPPENTKP---TVDEMIIDVIQETS 193

Query: 232 DDDVDDDDNADADDDNDNRRSGSNRGKQSIKTEEAEDDGVKKFSRCHSTGHSILKARRED 291
           DD+ DD          D   S       SIK E+   +  +KFSR HSTGHSI++ + E+
Sbjct: 194 DDEEDDHHRQQTTTQIDTWPSSGQ--TSSIKKEQ---NLPEKFSRSHSTGHSIVRNKPEE 253

Query: 292 DDRYKLRLPEHVKIKIIRGHNWTGSCVTFDEILRNPG 325
           +D+Y LRLPEHVKIK+ RGH+ T SCVTF E++RN G
Sbjct: 254 EDKYTLRLPEHVKIKVTRGHSQTESCVTFAELIRNRG 272

[Close]

BLAST of Csor.00g069860 vs. ExPASy Swiss-Prot
Match: Q9FIR0 (RING-H2 finger protein ATL30 OS=Arabidopsis thaliana OX=3702 GN=ATL30 PE=2 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.2e-52
Identity = 127/291 (43.64%), Postives = 175/291 (60.14%), Query Frame = 0


Query: 50  FSPEEHSTPPLTIILTLILLAFLLVGFFSIYFCRCIMDSLLHSRNLRRS---PSGNI-LH 109
           + P+ +S PPL IILT+ILL    +GFF+IYFC+C   +L  + N       P   I   
Sbjct: 15  YPPQHYSKPPLVIILTVILLVVFFIGFFAIYFCKCFYHTLTEAWNHHYHNGLPENQIQAQ 74

Query: 110 PSADSPTVPPGLDPLLINTFPTFPYSGIKEFRSDKFGLECAICLLEFDDDS-FLRLLTVC 169
                P V PGL+P +I ++P FP+S +K+ R DK+GLECAICLLEF+++   LRLLT C
Sbjct: 75  QEPVQPPVNPGLEPHIIQSYPLFPFSSVKDLREDKYGLECAICLLEFEEEHILLRLLTTC 134

Query: 170 CHVFHQECIDLWLESHKTCPVCRRNLDSDSARNSADKPPDSDHDNPPRSTHHESIEDAIS 229
            HVFHQECID WLES+KTCPVCRRNLD ++  N                   E I + I 
Sbjct: 135 YHVFHQECIDQWLESNKTCPVCRRNLDPNAPENI-----------------KELIIEVIQ 194

Query: 230 IDIDDDVDDDDNADADDDNDNRRSGSNRGKQSIKTEEAEDDGVKKFSRCHSTGHSILKAR 289
            +  ++ D +  + +++   +R+S  N  +   K E   D    KFSR  +TGHSI++ +
Sbjct: 195 ENAHENRDQEQTSTSNEVMLSRQSSGNNER---KIETLPD----KFSRSKTTGHSIVRNK 254

Query: 290 REDDDRYKLRLPEHVKIKIIRGH--NWTGSCVTFDEILRNPGNGGGFSELS 334
            E++DRY LRLP+HVKIK+ R H  N T SC++F E++RN    G F E+S
Sbjct: 255 PEEEDRYTLRLPDHVKIKVTRRHNNNQTESCISFGELVRN--REGRFGEVS 279

[Close]

BLAST of Csor.00g069860 vs. ExPASy Swiss-Prot
Match: Q6NKR1 (RING-H2 finger protein ATL28 OS=Arabidopsis thaliana OX=3702 GN=ATL28 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.0e-32
Identity = 98/283 (34.63%), Postives = 141/283 (49.82%), Query Frame = 0


Query: 59  PLTIILTLILLAFLLVGFFSIYFCRCIMDSLLHSRNLRRSPSGNILHPSADSPTVPPGLD 118
           P+T++LT +LL  +  GFFS++  + +++ L  + NL+R+P G+++H +  +P    GLD
Sbjct: 22  PVTVVLTGVLLFVIFAGFFSLFLWQFLLNRLFTTWNLQRTPYGDLIHVA--TPPENTGLD 81

Query: 119 PLLINTFPTFPYSGIKEFRSDKFGLECAICLLEFDDDSFLRLLTVCCHVFHQECIDLWLE 178
           P +I +FP F YS   +      G ECAICL EF D+  +RL+TVC H FH  CIDLW E
Sbjct: 82  PFIIRSFPVFHYSSATK---KNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFE 141

Query: 179 SHKTCPVCRRNLDSDSARNSADKPPDSDHDNPPRSTHHESIEDAISIDIDDDVDDDDNAD 238
            HKTCPVCR  LD                     S   ES  + ++I I D   D++N  
Sbjct: 142 LHKTCPVCRCELDPGMI----------------GSGRLESFHNTVTITIQDINHDEENPP 201

Query: 239 ADDDNDNRRSGSNRGKQSIKTEEAEDDGVKKFSRCHSTGHSILKARREDDDRYKLRLPEH 298
                    +GS++           +    +FSR HSTGH ++K                
Sbjct: 202 T--------AGSSK--------RLIEASAWRFSRSHSTGHFMVKT-------------TD 254

Query: 299 VKIKIIRGHNWTGSCVTFDEILRNPGNGGGFSELSESDDRIDL 342
             +K  R H  TGSCV+FDE+ R  G G  +   S    RI++
Sbjct: 262 ANVKSKRRHYQTGSCVSFDELTRYEGAGWQWLGDSSHISRIEV 254

[Close]

BLAST of Csor.00g069860 vs. ExPASy Swiss-Prot
Match: Q8RXX9 (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV=2)

HSP 1 Score: 121.3 bits (303), Expect = 2.1e-26
Identity = 90/259 (34.75%), Postives = 128/259 (49.42%), Query Frame = 0


Query: 57  TPPLTIILTLILLAFLLVGFFSIYFCRC--IMDSLLHSRNLRRSPSGNILHPSADSPTVP 116
           +P + +I+ +++ A   +GFFSIYF  C  + D+ +       SP+G      A      
Sbjct: 46  SPAMAVIVVILIAALFFMGFFSIYFRHCSGVPDAGV-------SPAGG-ARSRATVNAAA 105

Query: 117 PGLDPLLINTFPTFPYSGIKEFRSDKFGLECAICLLEFDDDSFLRLLTVCCHVFHQECID 176
            GLD  ++ TFPTF YS +K  +  K  LECAICL EF+DD  LRLL  C HVFH  CID
Sbjct: 106 RGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCID 165

Query: 177 LWLESHKTCPVCRRNLDSDSARNSADKPPDSDHD--------NPPRSTHHESIEDAISID 236
            WLE+H TCPVCR NL    A   + +P  ++ D        NP         E  ++ +
Sbjct: 166 AWLEAHVTCPVCRANLAEQVAEGESVEPGGTEPDLELQQVVVNPEPVVTAPVPEQLVTSE 225

Query: 237 IDDDVDDDDNADADDDNDNRRSGSNRGKQSIKTEEAEDDGVKKFSRCHSTGHSILKARRE 296
           +D                 R  G     + +           KFSR H+TGHS+++   E
Sbjct: 226 VD---------------SRRLPGVPVDLKRV-----------KFSRSHTTGHSVVQP-GE 269

Query: 297 DDDRYKLRLPEHVKIKIIR 306
             +R+ LRLPE V+ +I++
Sbjct: 286 CTERFTLRLPEDVRKRIMK 269

[Close]

BLAST of Csor.00g069860 vs. ExPASy Swiss-Prot
Match: Q9LQM2 (RING-H2 finger protein ATL81 OS=Arabidopsis thaliana OX=3702 GN=ATL81 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.3e-25
Identity = 87/254 (34.25%), Postives = 133/254 (52.36%), Query Frame = 0


Query: 59  PLTIILTLILLAFLLVGFFSIYFCRCIMDSLLH--SRNLRRSPSGNILHPSADSPTVPPG 118
           P+TI+LT  LL  +  GFFS +FC C+   L+   + +  R+   N++ PS  +P    G
Sbjct: 73  PVTIVLTGSLLFIIFTGFFSFFFCGCLFRKLMRIWNNHRNRNRPSNLIQPS--NPPENLG 132

Query: 119 LDPLLINTFPTFPYSGIKEFRSDKFGLECAICLLEFDDDSFLRLLTVCCHVFHQECIDLW 178
           LD  +I +FP +PYS +K+  +D    +C+ICL EF DD  +RL++ C H FH  CIDLW
Sbjct: 133 LDSKIIESFPEYPYS-VKDHGTD----QCSICLTEFMDDDTIRLISTCNHSFHTICIDLW 192

Query: 179 LESHKTCPVCRRNLDSDSARNSADKPPDSDHDNPPRSTHHES--IEDAISIDIDDD---- 238
            E HKTCPVCRR LD +  R S +KP +    +  RS  H+     D ++I + ++    
Sbjct: 193 FEGHKTCPVCRRELDVED-RTSLEKPLEVPEIDLVRSEIHDEPLPRDTVTIIVHEEHPST 252

Query: 239 -VDDDDNADADDDNDNRRSGSNRGKQSIKTEEAEDDGVKKFSRCHSTGHSILKARREDDD 298
            +   ++ D  +  + R   SN                 +F R HSTGHSI+     + +
Sbjct: 253 TIGSLEHTDEIESYERRMKASN----------------LRFWRSHSTGHSIVVKTENEQE 302

Query: 299 RYKLRLPEHVKIKI 304
             +    + +KI+I
Sbjct: 313 EEEEEEKDEIKIRI 302

[Close]

BLAST of Csor.00g069860 vs. NCBI nr
Match: KAG6571655.1 (RING-H2 finger protein ATL29, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011384.1 RING-H2 finger protein ATL29, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 680 bits (1754), Expect = 2.00e-246
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0


Query: 1   MTFLINSPPPPPSPPPPPSPPPPSPPSSSSSFLLHVFFRPMSTDFSHSSFSPEEHSTPPL 60
           MTFLINSPPPPPSPPPPPSPPPPSPPSSSSSFLLHVFFRPMSTDFSHSSFSPEEHSTPPL
Sbjct: 1   MTFLINSPPPPPSPPPPPSPPPPSPPSSSSSFLLHVFFRPMSTDFSHSSFSPEEHSTPPL 60

Query: 61  TIILTLILLAFLLVGFFSIYFCRCIMDSLLHSRNLRRSPSGNILHPSADSPTVPPGLDPL 120
           TIILTLILLAFLLVGFFSIYFCRCIMDSLLHSRNLRRSPSGNILHPSADSPTVPPGLDPL
Sbjct: 61  TIILTLILLAFLLVGFFSIYFCRCIMDSLLHSRNLRRSPSGNILHPSADSPTVPPGLDPL 120

Query: 121 LINTFPTFPYSGIKEFRSDKFGLECAICLLEFDDDSFLRLLTVCCHVFHQECIDLWLESH 180
           LINTFPTFPYSGIKEFRSDKFGLECAICLLEFDDDSFLRLLTVCCHVFHQECIDLWLESH
Sbjct: 121 LINTFPTFPYSGIKEFRSDKFGLECAICLLEFDDDSFLRLLTVCCHVFHQECIDLWLESH 180

Query: 181 KTCPVCRRNLDSDSARNSADKPPDSDHDNPPRSTHHESIEDAISIDIDDDVDDDDNADAD 240
           KTCPVCRRNLDSDSARNSADKPPDSDHDNPPRSTHHESIEDAISIDIDDDVDDDDNADAD
Sbjct: 181 KTCPVCRRNLDSDSARNSADKPPDSDHDNPPRSTHHESIEDAISIDIDDDVDDDDNADAD 240

Query: 241 DDNDNRRSGSNRGKQSIKTEEAEDDGVKKFSRCHSTGHSILKARREDDDRYKLRLPEHVK 300
           DDNDNRRSGSNRGKQSIKTEEAEDDGVKKFSRCHSTGHSILKARREDDDRYKLRLPEHVK
Sbjct: 241 DDNDNRRSGSNRGKQSIKTEEAEDDGVKKFSRCHSTGHSILKARREDDDRYKLRLPEHVK 300

Query: 301 IKIIRGHNWTGSCVTFDEILRNPGNGGGFSELSESDDRIDLQKPP 345
           IKIIRGHNWTGSCVTFDEILRNPGNGGGFSELSESDDRIDLQKPP
Sbjct: 301 IKIIRGHNWTGSCVTFDEILRNPGNGGGFSELSESDDRIDLQKPP 345

[Close]

BLAST of Csor.00g069860 vs. NCBI nr
Match: XP_022963762.1 (RING-H2 finger protein ATL29 [Cucurbita moschata])

HSP 1 Score: 672 bits (1733), Expect = 3.18e-243
Identity = 341/345 (98.84%), Postives = 342/345 (99.13%), Query Frame = 0


Query: 1   MTFLINSPPPPPSPPPPPSPPPPSPPSSSSSFLLHVFFRPMSTDFSHSSFSPEEHSTPPL 60
           MT LINSPPPPPSPPPPPSPPPPSPPSSSSSFLLHVFFRPMSTDFSHSSFSPEEHSTPPL
Sbjct: 1   MTSLINSPPPPPSPPPPPSPPPPSPPSSSSSFLLHVFFRPMSTDFSHSSFSPEEHSTPPL 60

Query: 61  TIILTLILLAFLLVGFFSIYFCRCIMDSLLHSRNLRRSPSGNILHPSADSPTVPPGLDPL 120
           TIILTLILLAFLLVGFFSIYFCRCIMDSLLHSRNLRRSPSGNILHPSADSPTVPPGLDPL
Sbjct: 61  TIILTLILLAFLLVGFFSIYFCRCIMDSLLHSRNLRRSPSGNILHPSADSPTVPPGLDPL 120

Query: 121 LINTFPTFPYSGIKEFRSDKFGLECAICLLEFDDDSFLRLLTVCCHVFHQECIDLWLESH 180
           LINTFPTFPYSGIKEFRSDKFGLECAICLLEFDDDSFLRLLTVCCHVFHQECIDLWLESH
Sbjct: 121 LINTFPTFPYSGIKEFRSDKFGLECAICLLEFDDDSFLRLLTVCCHVFHQECIDLWLESH 180

Query: 181 KTCPVCRRNLDSDSARNSADKPPDSDHDNPPRSTHHESIEDAISIDIDDDVDDDDNADAD 240
           KTCPVCRRNLDSDSARNSADKPPDSDHDNPPRSTHHESIEDAISIDIDDDVDDDDNADAD
Sbjct: 181 KTCPVCRRNLDSDSARNSADKPPDSDHDNPPRSTHHESIEDAISIDIDDDVDDDDNADAD 240

Query: 241 DDNDNRRSGSNRGKQSIKTEEAEDDGVKKFSRCHSTGHSILKARREDDDRYKLRLPEHVK 300
           DDND+RRSGSNRGKQSIKTEEAEDDG KKFSRCHSTGHSILKARREDDDRYKLRLPEHVK
Sbjct: 241 DDNDDRRSGSNRGKQSIKTEEAEDDGAKKFSRCHSTGHSILKARREDDDRYKLRLPEHVK 300

Query: 301 IKIIRGHNWTGSCVTFDEILRNPGNGGGFSELSESDDRIDLQKPP 345
           IKIIRGHNWTGSCVTFDE LRNPGNGGGFSELSESDDRIDLQKPP
Sbjct: 301 IKIIRGHNWTGSCVTFDEFLRNPGNGGGFSELSESDDRIDLQKPP 345

[Close]

BLAST of Csor.00g069860 vs. NCBI nr
Match: XP_023554783.1 (RING-H2 finger protein ATL29 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 639 bits (1647), Expect = 3.38e-230
Identity = 331/347 (95.39%), Postives = 336/347 (96.83%), Query Frame = 0


Query: 1   MTFLINSPPPPPSPPPPPSPPPPSPPSSSSS-FLLHVFFRPMSTDFSHSSFSPEEHSTPP 60
           M+ LINS      PPPPPSPPPPSPPSSSSS FLLHVFFRPMSTDFSHSSFSPEEHSTPP
Sbjct: 1   MSPLINS------PPPPPSPPPPSPPSSSSSSFLLHVFFRPMSTDFSHSSFSPEEHSTPP 60

Query: 61  LTIILTLILLAFLLVGFFSIYFCRCIMDSLLHSRNLRRSPSGNILHPSADSPTVPPGLDP 120
           LTIILTLILLAFLLVGFFSIYFCRCIMDSLLHSRNLRRSPSGNILHPSADSPTVPPGLDP
Sbjct: 61  LTIILTLILLAFLLVGFFSIYFCRCIMDSLLHSRNLRRSPSGNILHPSADSPTVPPGLDP 120

Query: 121 LLINTFPTFPYSGIKEFRSDKFGLECAICLLEFDDDSFLRLLTVCCHVFHQECIDLWLES 180
           LLINTFPTFPYSGIKEFRSDKFGLECAICLLEFDDDSFLRLLTVCCHVFHQECIDLWLES
Sbjct: 121 LLINTFPTFPYSGIKEFRSDKFGLECAICLLEFDDDSFLRLLTVCCHVFHQECIDLWLES 180

Query: 181 HKTCPVCRRNLDSDSARNSADKPPDSD-HDNPPRSTHHESIEDAISIDIDDDVDDDDNAD 240
           HKTCPVCRRNLDSDSARNSADKPPDSD HDNPPRSTHHESIEDAISIDIDDDVDDDDNAD
Sbjct: 181 HKTCPVCRRNLDSDSARNSADKPPDSDDHDNPPRSTHHESIEDAISIDIDDDVDDDDNAD 240

Query: 241 ADDDNDNRRSGSNRGKQSIKTEEAEDDGVKKFSRCHSTGHSILKARREDDDRYKLRLPEH 300
           ADDD+D RRSGSNRGKQSIKTEEAEDDG+KKFSRCHSTGHSILKARR+DDDRYKLRLPEH
Sbjct: 241 ADDDDD-RRSGSNRGKQSIKTEEAEDDGIKKFSRCHSTGHSILKARRKDDDRYKLRLPEH 300

Query: 301 VKIKIIRGHNWTGSCVTFDEILRNPGNGGGFSELSESDDRIDLQKPP 345
           VKIKIIRGHNWTGSCVTF+E LRNPGNGGGFSELSESDDRIDLQKPP
Sbjct: 301 VKIKIIRGHNWTGSCVTFEEFLRNPGNGGGFSELSESDDRIDLQKPP 340

[Close]

BLAST of Csor.00g069860 vs. NCBI nr
Match: XP_022967655.1 (LOW QUALITY PROTEIN: RING-H2 finger protein ATL29-like, partial [Cucurbita maxima])

HSP 1 Score: 617 bits (1592), Expect = 6.51e-222
Identity = 309/318 (97.17%), Postives = 312/318 (98.11%), Query Frame = 0


Query: 28  SSSSFLLHVFFRPMSTDFSHSSFSPEEHSTPPLTIILTLILLAFLLVGFFSIYFCRCIMD 87
           SSSSFLLHVFFRPMSTDF HSSFSPEEHSTPPLTIILTLILLAFLLVGFFSIYFCRCIMD
Sbjct: 18  SSSSFLLHVFFRPMSTDFPHSSFSPEEHSTPPLTIILTLILLAFLLVGFFSIYFCRCIMD 77

Query: 88  SLLHSRNLRRSPSGNILHPSADSPTVPPGLDPLLINTFPTFPYSGIKEFRSDKFGLECAI 147
           SLLHSRNLRRSPSGNILHPSADSPTVPPGLDPLLINTFPTFPYSGIKEFRSDKFGLECAI
Sbjct: 78  SLLHSRNLRRSPSGNILHPSADSPTVPPGLDPLLINTFPTFPYSGIKEFRSDKFGLECAI 137

Query: 148 CLLEFDDDSFLRLLTVCCHVFHQECIDLWLESHKTCPVCRRNLDSDSARNSADKPPDSDH 207
           CLLEFDDDSFLRLLTVCCHVFHQECIDLWLESHKTCPVCRRNLDSDS RNSADKPPDSDH
Sbjct: 138 CLLEFDDDSFLRLLTVCCHVFHQECIDLWLESHKTCPVCRRNLDSDSTRNSADKPPDSDH 197

Query: 208 DNPPRSTHHESIEDAISIDIDDDVDDDDNADADDDNDNRRSGSNRGKQSIKTEEAEDDGV 267
           DNPPRSTHHESIEDAISIDIDDDVDDDDNADADDD+D RRSGSNRGKQSIK EEAEDDG+
Sbjct: 198 DNPPRSTHHESIEDAISIDIDDDVDDDDNADADDDDD-RRSGSNRGKQSIKIEEAEDDGI 257

Query: 268 KKFSRCHSTGHSILKARREDDDRYKLRLPEHVKIKIIRGHNWTGSCVTFDEILRNPGNGG 327
           KKFSRCHSTGHSILKARREDDDRYKLRLPEHVKIK+IRGHNWTGSCVTFDE LRNPGN G
Sbjct: 258 KKFSRCHSTGHSILKARREDDDRYKLRLPEHVKIKMIRGHNWTGSCVTFDEFLRNPGNAG 317

Query: 328 GFSELSESDDRIDLQKPP 345
           GFSELSESDDRIDLQKPP
Sbjct: 318 GFSELSESDDRIDLQKPP 334

[Close]

BLAST of Csor.00g069860 vs. NCBI nr
Match: XP_038888539.1 (RING-H2 finger protein ATL29-like [Benincasa hispida])

HSP 1 Score: 529 bits (1362), Expect = 9.07e-187
Identity = 272/325 (83.69%), Postives = 299/325 (92.00%), Query Frame = 0


Query: 27  SSSSSFLLHVFFRPMSTDFSHSSFSPEEHSTPPLTIILTLILLAFLLVGFFSIYFCRCIM 86
           SSSSSFLLHVFFRPMSTDFSH  FS  +H+TPPLTIILTLILLAFLLVGFFSIYFCRC+M
Sbjct: 19  SSSSSFLLHVFFRPMSTDFSHPPFSTHDHTTPPLTIILTLILLAFLLVGFFSIYFCRCVM 78

Query: 87  DSLLHSRNLRRSPSGNILHPSADSPTVPPGLDPLLINTFPTFPYSGIKEFRSDKFGLECA 146
           DSLLHSRNLRRSPSGN+LHPS+DSP  PPGLDPLLIN+FPTFPYSGIKEFRSDKFGLECA
Sbjct: 79  DSLLHSRNLRRSPSGNLLHPSSDSPAPPPGLDPLLINSFPTFPYSGIKEFRSDKFGLECA 138

Query: 147 ICLLEFDDDSFLRLLTVCCHVFHQECIDLWLESHKTCPVCRRNLDSDSARNSADKP--PD 206
           ICLLEFDDDSFLRLLT C HVFHQECIDLWLESHKTCPVCRRNLD+DS R+S+DKP  P+
Sbjct: 139 ICLLEFDDDSFLRLLTNCYHVFHQECIDLWLESHKTCPVCRRNLDADSPRDSSDKPLDPN 198

Query: 207 SDHDNPPRSTHHESIEDAISIDIDDDVDDDD-NADADDDNDNRRSGS-NRGKQSI-KTEE 266
           S+ DNPPR+ HHESIEDAISIDIDDDVDDDD NADADDD+    SG+ N+GKQSI KTEE
Sbjct: 199 SNTDNPPRNAHHESIEDAISIDIDDDVDDDDDNADADDDH--HPSGNLNKGKQSIRKTEE 258

Query: 267 AEDDGVKKFSRCHSTGHSILKARRE-DDDRYKLRLPEHVKIKIIRGHNWTGSCVTFDEIL 326
            +++ +K+FSRCHSTGHSI+KARRE + D++KLRLPEH+KIKIIRGHNWTGSCVTF+E L
Sbjct: 259 DQEESIKRFSRCHSTGHSIVKARREGEQDKHKLRLPEHIKIKIIRGHNWTGSCVTFEEFL 318

Query: 327 RNPGNGGGFSELSESDDRIDLQKPP 345
           RNPGNGGGFSELSESDDRI+L KPP
Sbjct: 319 RNPGNGGGFSELSESDDRINLPKPP 341

[Close]

BLAST of Csor.00g069860 vs. ExPASy TrEMBL
Match: A0A6J1HG37 (RING-H2 finger protein ATL29 OS=Cucurbita moschata OX=3662 GN=LOC111463956 PE=4 SV=1)

HSP 1 Score: 672 bits (1733), Expect = 1.54e-243
Identity = 341/345 (98.84%), Postives = 342/345 (99.13%), Query Frame = 0


Query: 1   MTFLINSPPPPPSPPPPPSPPPPSPPSSSSSFLLHVFFRPMSTDFSHSSFSPEEHSTPPL 60
           MT LINSPPPPPSPPPPPSPPPPSPPSSSSSFLLHVFFRPMSTDFSHSSFSPEEHSTPPL
Sbjct: 1   MTSLINSPPPPPSPPPPPSPPPPSPPSSSSSFLLHVFFRPMSTDFSHSSFSPEEHSTPPL 60

Query: 61  TIILTLILLAFLLVGFFSIYFCRCIMDSLLHSRNLRRSPSGNILHPSADSPTVPPGLDPL 120
           TIILTLILLAFLLVGFFSIYFCRCIMDSLLHSRNLRRSPSGNILHPSADSPTVPPGLDPL
Sbjct: 61  TIILTLILLAFLLVGFFSIYFCRCIMDSLLHSRNLRRSPSGNILHPSADSPTVPPGLDPL 120

Query: 121 LINTFPTFPYSGIKEFRSDKFGLECAICLLEFDDDSFLRLLTVCCHVFHQECIDLWLESH 180
           LINTFPTFPYSGIKEFRSDKFGLECAICLLEFDDDSFLRLLTVCCHVFHQECIDLWLESH
Sbjct: 121 LINTFPTFPYSGIKEFRSDKFGLECAICLLEFDDDSFLRLLTVCCHVFHQECIDLWLESH 180

Query: 181 KTCPVCRRNLDSDSARNSADKPPDSDHDNPPRSTHHESIEDAISIDIDDDVDDDDNADAD 240
           KTCPVCRRNLDSDSARNSADKPPDSDHDNPPRSTHHESIEDAISIDIDDDVDDDDNADAD
Sbjct: 181 KTCPVCRRNLDSDSARNSADKPPDSDHDNPPRSTHHESIEDAISIDIDDDVDDDDNADAD 240

Query: 241 DDNDNRRSGSNRGKQSIKTEEAEDDGVKKFSRCHSTGHSILKARREDDDRYKLRLPEHVK 300
           DDND+RRSGSNRGKQSIKTEEAEDDG KKFSRCHSTGHSILKARREDDDRYKLRLPEHVK
Sbjct: 241 DDNDDRRSGSNRGKQSIKTEEAEDDGAKKFSRCHSTGHSILKARREDDDRYKLRLPEHVK 300

Query: 301 IKIIRGHNWTGSCVTFDEILRNPGNGGGFSELSESDDRIDLQKPP 345
           IKIIRGHNWTGSCVTFDE LRNPGNGGGFSELSESDDRIDLQKPP
Sbjct: 301 IKIIRGHNWTGSCVTFDEFLRNPGNGGGFSELSESDDRIDLQKPP 345

[Close]

BLAST of Csor.00g069860 vs. ExPASy TrEMBL
Match: A0A6J1HV34 (LOW QUALITY PROTEIN: RING-H2 finger protein ATL29-like OS=Cucurbita maxima OX=3661 GN=LOC111467100 PE=4 SV=1)

HSP 1 Score: 617 bits (1592), Expect = 3.15e-222
Identity = 309/318 (97.17%), Postives = 312/318 (98.11%), Query Frame = 0


Query: 28  SSSSFLLHVFFRPMSTDFSHSSFSPEEHSTPPLTIILTLILLAFLLVGFFSIYFCRCIMD 87
           SSSSFLLHVFFRPMSTDF HSSFSPEEHSTPPLTIILTLILLAFLLVGFFSIYFCRCIMD
Sbjct: 18  SSSSFLLHVFFRPMSTDFPHSSFSPEEHSTPPLTIILTLILLAFLLVGFFSIYFCRCIMD 77

Query: 88  SLLHSRNLRRSPSGNILHPSADSPTVPPGLDPLLINTFPTFPYSGIKEFRSDKFGLECAI 147
           SLLHSRNLRRSPSGNILHPSADSPTVPPGLDPLLINTFPTFPYSGIKEFRSDKFGLECAI
Sbjct: 78  SLLHSRNLRRSPSGNILHPSADSPTVPPGLDPLLINTFPTFPYSGIKEFRSDKFGLECAI 137

Query: 148 CLLEFDDDSFLRLLTVCCHVFHQECIDLWLESHKTCPVCRRNLDSDSARNSADKPPDSDH 207
           CLLEFDDDSFLRLLTVCCHVFHQECIDLWLESHKTCPVCRRNLDSDS RNSADKPPDSDH
Sbjct: 138 CLLEFDDDSFLRLLTVCCHVFHQECIDLWLESHKTCPVCRRNLDSDSTRNSADKPPDSDH 197

Query: 208 DNPPRSTHHESIEDAISIDIDDDVDDDDNADADDDNDNRRSGSNRGKQSIKTEEAEDDGV 267
           DNPPRSTHHESIEDAISIDIDDDVDDDDNADADDD+D RRSGSNRGKQSIK EEAEDDG+
Sbjct: 198 DNPPRSTHHESIEDAISIDIDDDVDDDDNADADDDDD-RRSGSNRGKQSIKIEEAEDDGI 257

Query: 268 KKFSRCHSTGHSILKARREDDDRYKLRLPEHVKIKIIRGHNWTGSCVTFDEILRNPGNGG 327
           KKFSRCHSTGHSILKARREDDDRYKLRLPEHVKIK+IRGHNWTGSCVTFDE LRNPGN G
Sbjct: 258 KKFSRCHSTGHSILKARREDDDRYKLRLPEHVKIKMIRGHNWTGSCVTFDEFLRNPGNAG 317

Query: 328 GFSELSESDDRIDLQKPP 345
           GFSELSESDDRIDLQKPP
Sbjct: 318 GFSELSESDDRIDLQKPP 334

[Close]

BLAST of Csor.00g069860 vs. ExPASy TrEMBL
Match: A0A1S3CQ65 (RING-H2 finger protein ATL29-like OS=Cucumis melo OX=3656 GN=LOC103503555 PE=4 SV=1)

HSP 1 Score: 499 bits (1284), Expect = 2.69e-174
Identity = 259/331 (78.25%), Postives = 285/331 (86.10%), Query Frame = 0


Query: 27  SSSSSFLLHVFFRPMSTDFSHSSFSPEEHSTPPLTIILTLILLAFLLVGFFSIYFCRCIM 86
           SS SS  LHVFFRPMSTDFS   F+  +HSTPPLTIILTLILLAFLL+GFFSIYFCRCIM
Sbjct: 72  SSCSSVPLHVFFRPMSTDFSRPPFATHDHSTPPLTIILTLILLAFLLIGFFSIYFCRCIM 131

Query: 87  DSLLHSRNLRRSPSGNILHPSADSPTVPPGLDPLLINTFPTFPYSGIKEFRSDKFGLECA 146
           DSLLHSRNLRRSPSGN+LHPS+D+P  PPGLDPLLIN+FPTFPYSGIKEFRSDKFGLECA
Sbjct: 132 DSLLHSRNLRRSPSGNLLHPSSDAPAPPPGLDPLLINSFPTFPYSGIKEFRSDKFGLECA 191

Query: 147 ICLLEFDDDSFLRLLTVCCHVFHQECIDLWLESHKTCPVCRRNLDSDSARNSADKP--PD 206
           ICLLEFDDDSFLRLLT CCHVFHQECIDLWL+SHKTCPVCRR+LDS+S R+S DKP  PD
Sbjct: 192 ICLLEFDDDSFLRLLTNCCHVFHQECIDLWLDSHKTCPVCRRDLDSESPRDSTDKPLDPD 251

Query: 207 SDHDNPPRSTHHESIEDAISIDIDDDVDDDDNADADDDNDNRRSGS-NRGKQSI-KTEEA 266
           S+ DNPPR +HHESIEDAISI+IDDDVDD+DN DAD+D+  R S    RGKQ+I KTEE 
Sbjct: 252 SNTDNPPRISHHESIEDAISIEIDDDVDDEDNGDADEDH--RPSVCWERGKQTITKTEEE 311

Query: 267 --------EDDGVKKFSRCHSTGHSILKARREDDDRYKLRLPEHVKIKIIRGHNWTGSCV 326
                   E    K+FSRCHSTGHSI+K RRE +D++KLRLPEH+KIKIIRGHNWTGSCV
Sbjct: 312 KEKEKEKKESGSFKRFSRCHSTGHSIVKGRREGEDKHKLRLPEHIKIKIIRGHNWTGSCV 371

Query: 327 TFDEILRNPGNGGGFSELSESDDRIDLQKPP 345
           TFDE LRNPGN GGFSEL ES+DR +L KPP
Sbjct: 372 TFDEFLRNPGNSGGFSELYESNDRPNLSKPP 400

[Close]

BLAST of Csor.00g069860 vs. ExPASy TrEMBL
Match: A0A0A0LI09 (RING-H2 finger protein ATL29 OS=Cucumis sativus OX=3659 GN=Csa_3G901170 PE=4 SV=1)

HSP 1 Score: 479 bits (1234), Expect = 1.15e-167
Identity = 252/328 (76.83%), Postives = 281/328 (85.67%), Query Frame = 0


Query: 27  SSSSSFLLHVFFRPMSTDFSHSSFSPEEHSTPPLTIILTLILLAFLLVGFFSIYFCRCIM 86
           SSSSSF LHVFFRPMSTDFS   F   +HS+PPLTIILTLILLAFLL+GFFSIYFCRCIM
Sbjct: 13  SSSSSFPLHVFFRPMSTDFSRPPFPTNDHSSPPLTIILTLILLAFLLIGFFSIYFCRCIM 72

Query: 87  DSLLHSRNLRRSPSGNILHPSADSPTVPPGLDPLLINTFPTFPYSGIKEFRSDKFGLECA 146
           +SLLHSRNLRRSPSGN+LHP++DSP   PGLDPLLIN+FPTFPYSGIKEFRSDK GLECA
Sbjct: 73  ESLLHSRNLRRSPSGNLLHPTSDSPAPHPGLDPLLINSFPTFPYSGIKEFRSDKIGLECA 132

Query: 147 ICLLEFDDDSFLRLLTVCCHVFHQECIDLWLESHKTCPVCRRNLDSDSARNSADKP--PD 206
           ICLLEFDDDSFLRLLT CCHVFHQECIDLWL+SHKTCPVCRR+LDS S R+S+DKP  PD
Sbjct: 133 ICLLEFDDDSFLRLLTNCCHVFHQECIDLWLDSHKTCPVCRRDLDSVSPRDSSDKPIDPD 192

Query: 207 SDHDNPPRSTHHESIEDAISIDIDDDVDDDDNADADDDNDNRRSG-SNRGKQSI-KTEEA 266
           S+ DNPPR +HHESIEDAISIDIDDD+DD      D D D+R S  S +GKQ I KTEE 
Sbjct: 193 SNTDNPPRISHHESIEDAISIDIDDDIDD---VIGDADEDHRPSVCSEKGKQGITKTEEE 252

Query: 267 ED-----DGVKKFSRCHSTGHSILKARREDDDRYKLRLPEHVKIKIIRGHNWTGSCVTFD 326
           ++     +  K+FSR HSTGHSI+K+RRE +D++KL LPEH+KIKIIRGHNWTGSCVTFD
Sbjct: 253 KEKEKELERFKRFSRSHSTGHSIVKSRREGEDKHKLILPEHIKIKIIRGHNWTGSCVTFD 312

Query: 327 EILRNPGNGGGFSELSESDDRIDLQKPP 345
           E LRN GNGGGFSELSES+DR +L KPP
Sbjct: 313 EFLRNSGNGGGFSELSESNDRPNLPKPP 337

[Close]

BLAST of Csor.00g069860 vs. ExPASy TrEMBL
Match: A0A6J1K7T3 (RING-H2 finger protein ATL29-like OS=Cucurbita maxima OX=3661 GN=LOC111491422 PE=4 SV=1)

HSP 1 Score: 433 bits (1114), Expect = 1.19e-149
Identity = 223/313 (71.25%), Postives = 258/313 (82.43%), Query Frame = 0


Query: 33  LLHVFFRPMSTDFSHSSFSPEEHSTPPLTIILTLILLAFLLVGFFSIYFCRCIMDSLLHS 92
           LL V FRPMSTD +   F  ++H +PP+TI+LTLIL+AFL VGFFSIY CRC++DS LHS
Sbjct: 14  LLQVLFRPMSTDLTRIPFPAQDHGSPPVTIVLTLILVAFLFVGFFSIYCCRCVVDSFLHS 73

Query: 93  RNLRRSPSGNILHPSADSPTVPPGLDPLLINTFPTFPYSGIKEFRSDKFGLECAICLLEF 152
           RNLRRS SGN+LHPS DSP  P GLDPLLIN+FPTFPYS IKEFRSD  GLECAICL+EF
Sbjct: 74  RNLRRSTSGNLLHPSTDSPAAPTGLDPLLINSFPTFPYSKIKEFRSDNLGLECAICLIEF 133

Query: 153 DDDSFLRLLTVCCHVFHQECIDLWLESHKTCPVCRRNLDSDSARNSADKPPDSDHDNPPR 212
           +D+SFLRLLTVC HVFHQECIDLWLESHKTCPVCRRNLDSDS RNSADK  D     PPR
Sbjct: 134 NDESFLRLLTVCYHVFHQECIDLWLESHKTCPVCRRNLDSDSRRNSADKTSD-----PPR 193

Query: 213 STHHESIEDAISIDIDDDVDDDDNADADDDNDNRRSGSNRGKQSIKTEEAE-DDGVKKFS 272
           ++  ESIEDAISIDID+D D + ++DADDD     S SN+GKQ I+TEE E ++  KKFS
Sbjct: 194 TSRRESIEDAISIDIDEDNDANADSDADDD---EGSCSNKGKQRIETEEMEKEESRKKFS 253

Query: 273 RCHSTGHSILKARREDDDRYKLRLPEHVKIKIIRGHNWTGSCVTFDEILRNPGNGGGFSE 332
           R HSTG+SI+KA+RE + R+KL LPEHVKIKI+RGHNWTGSCVT +E+ RNPGNGGG SE
Sbjct: 254 RSHSTGYSIVKAKREGEGRHKLILPEHVKIKILRGHNWTGSCVTLEELARNPGNGGGLSE 313

Query: 333 LSESDDRIDLQKP 344
           L E+ DR +LQ+P
Sbjct: 314 LCETGDRNNLQRP 318

[Close]

BLAST of Csor.00g069860 vs. TAIR 10
Match: AT4G17920.1 (RING/U-box superfamily protein )

HSP 1 Score: 244.2 bits (622), Expect = 1.5e-64
Identity = 140/277 (50.54%), Postives = 181/277 (65.34%), Query Frame = 0


Query: 52  PEEH-STPPLTIILTLILLAFLLVGFFSIYFCRCIMDSLLHSRNLRR---SPSGNILHPS 111
           P++H  TPPLT+ILT+ILL F  +GFF++YFC+C +D+++ +  L     + S N L   
Sbjct: 14  PQQHYVTPPLTVILTVILLVFFFIGFFTLYFCKCFLDTMVQAWRLHHGGDTVSDNPLQ-Q 73

Query: 112 ADSPTVPPGLDPLLINTFPTFPYSGIKEFRSDKFGLECAICLLEFDDDSFLRLLTVCCHV 171
            ++P V PGL+  +IN+FPTFPYS +K+ R +K+GLECAICLLEFD D  LRLLT C HV
Sbjct: 74  PEAPPVNPGLELRIINSFPTFPYSSVKDLREEKYGLECAICLLEFDGDHVLRLLTTCYHV 133

Query: 172 FHQECIDLWLESHKTCPVCRRNLDSDSARNSADKPPDSDHDNPPRSTHHESIEDAISIDI 231
           FHQECIDLW ESH+TCPVCRR+L         D PP  ++  P   T  E I D I    
Sbjct: 134 FHQECIDLWFESHRTCPVCRRDL---------DPPPPPENTKP---TVDEMIIDVIQETS 193

Query: 232 DDDVDDDDNADADDDNDNRRSGSNRGKQSIKTEEAEDDGVKKFSRCHSTGHSILKARRED 291
           DD+ DD          D   S       SIK E+   +  +KFSR HSTGHSI++ + E+
Sbjct: 194 DDEEDDHHRQQTTTQIDTWPSSGQ--TSSIKKEQ---NLPEKFSRSHSTGHSIVRNKPEE 253

Query: 292 DDRYKLRLPEHVKIKIIRGHNWTGSCVTFDEILRNPG 325
           +D+Y LRLPEHVKIK+ RGH+ T SCVTF E++RN G
Sbjct: 254 EDKYTLRLPEHVKIKVTRGHSQTESCVTFAELIRNRG 272

[Close]

BLAST of Csor.00g069860 vs. TAIR 10
Match: AT5G46650.1 (RING/U-box superfamily protein )

HSP 1 Score: 207.6 bits (527), Expect = 1.6e-53
Identity = 127/291 (43.64%), Postives = 175/291 (60.14%), Query Frame = 0


Query: 50  FSPEEHSTPPLTIILTLILLAFLLVGFFSIYFCRCIMDSLLHSRNLRRS---PSGNI-LH 109
           + P+ +S PPL IILT+ILL    +GFF+IYFC+C   +L  + N       P   I   
Sbjct: 15  YPPQHYSKPPLVIILTVILLVVFFIGFFAIYFCKCFYHTLTEAWNHHYHNGLPENQIQAQ 74

Query: 110 PSADSPTVPPGLDPLLINTFPTFPYSGIKEFRSDKFGLECAICLLEFDDDS-FLRLLTVC 169
                P V PGL+P +I ++P FP+S +K+ R DK+GLECAICLLEF+++   LRLLT C
Sbjct: 75  QEPVQPPVNPGLEPHIIQSYPLFPFSSVKDLREDKYGLECAICLLEFEEEHILLRLLTTC 134

Query: 170 CHVFHQECIDLWLESHKTCPVCRRNLDSDSARNSADKPPDSDHDNPPRSTHHESIEDAIS 229
            HVFHQECID WLES+KTCPVCRRNLD ++  N                   E I + I 
Sbjct: 135 YHVFHQECIDQWLESNKTCPVCRRNLDPNAPENI-----------------KELIIEVIQ 194

Query: 230 IDIDDDVDDDDNADADDDNDNRRSGSNRGKQSIKTEEAEDDGVKKFSRCHSTGHSILKAR 289
            +  ++ D +  + +++   +R+S  N  +   K E   D    KFSR  +TGHSI++ +
Sbjct: 195 ENAHENRDQEQTSTSNEVMLSRQSSGNNER---KIETLPD----KFSRSKTTGHSIVRNK 254

Query: 290 REDDDRYKLRLPEHVKIKIIRGH--NWTGSCVTFDEILRNPGNGGGFSELS 334
            E++DRY LRLP+HVKIK+ R H  N T SC++F E++RN    G F E+S
Sbjct: 255 PEEEDRYTLRLPDHVKIKVTRRHNNNQTESCISFGELVRN--REGRFGEVS 279

[Close]

BLAST of Csor.00g069860 vs. TAIR 10
Match: AT2G35420.1 (RING/U-box superfamily protein )

HSP 1 Score: 141.4 bits (355), Expect = 1.4e-33
Identity = 98/283 (34.63%), Postives = 141/283 (49.82%), Query Frame = 0


Query: 59  PLTIILTLILLAFLLVGFFSIYFCRCIMDSLLHSRNLRRSPSGNILHPSADSPTVPPGLD 118
           P+T++LT +LL  +  GFFS++  + +++ L  + NL+R+P G+++H +  +P    GLD
Sbjct: 22  PVTVVLTGVLLFVIFAGFFSLFLWQFLLNRLFTTWNLQRTPYGDLIHVA--TPPENTGLD 81

Query: 119 PLLINTFPTFPYSGIKEFRSDKFGLECAICLLEFDDDSFLRLLTVCCHVFHQECIDLWLE 178
           P +I +FP F YS   +      G ECAICL EF D+  +RL+TVC H FH  CIDLW E
Sbjct: 82  PFIIRSFPVFHYSSATK---KNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFE 141

Query: 179 SHKTCPVCRRNLDSDSARNSADKPPDSDHDNPPRSTHHESIEDAISIDIDDDVDDDDNAD 238
            HKTCPVCR  LD                     S   ES  + ++I I D   D++N  
Sbjct: 142 LHKTCPVCRCELDPGMI----------------GSGRLESFHNTVTITIQDINHDEENPP 201

Query: 239 ADDDNDNRRSGSNRGKQSIKTEEAEDDGVKKFSRCHSTGHSILKARREDDDRYKLRLPEH 298
                    +GS++           +    +FSR HSTGH ++K                
Sbjct: 202 T--------AGSSK--------RLIEASAWRFSRSHSTGHFMVKT-------------TD 254

Query: 299 VKIKIIRGHNWTGSCVTFDEILRNPGNGGGFSELSESDDRIDL 342
             +K  R H  TGSCV+FDE+ R  G G  +   S    RI++
Sbjct: 262 ANVKSKRRHYQTGSCVSFDELTRYEGAGWQWLGDSSHISRIEV 254

[Close]

BLAST of Csor.00g069860 vs. TAIR 10
Match: AT3G05200.1 (RING/U-box superfamily protein )

HSP 1 Score: 121.3 bits (303), Expect = 1.5e-27
Identity = 90/259 (34.75%), Postives = 128/259 (49.42%), Query Frame = 0


Query: 57  TPPLTIILTLILLAFLLVGFFSIYFCRC--IMDSLLHSRNLRRSPSGNILHPSADSPTVP 116
           +P + +I+ +++ A   +GFFSIYF  C  + D+ +       SP+G      A      
Sbjct: 46  SPAMAVIVVILIAALFFMGFFSIYFRHCSGVPDAGV-------SPAGG-ARSRATVNAAA 105

Query: 117 PGLDPLLINTFPTFPYSGIKEFRSDKFGLECAICLLEFDDDSFLRLLTVCCHVFHQECID 176
            GLD  ++ TFPTF YS +K  +  K  LECAICL EF+DD  LRLL  C HVFH  CID
Sbjct: 106 RGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCID 165

Query: 177 LWLESHKTCPVCRRNLDSDSARNSADKPPDSDHD--------NPPRSTHHESIEDAISID 236
            WLE+H TCPVCR NL    A   + +P  ++ D        NP         E  ++ +
Sbjct: 166 AWLEAHVTCPVCRANLAEQVAEGESVEPGGTEPDLELQQVVVNPEPVVTAPVPEQLVTSE 225

Query: 237 IDDDVDDDDNADADDDNDNRRSGSNRGKQSIKTEEAEDDGVKKFSRCHSTGHSILKARRE 296
           +D                 R  G     + +           KFSR H+TGHS+++   E
Sbjct: 226 VD---------------SRRLPGVPVDLKRV-----------KFSRSHTTGHSVVQP-GE 269

Query: 297 DDDRYKLRLPEHVKIKIIR 306
             +R+ LRLPE V+ +I++
Sbjct: 286 CTERFTLRLPEDVRKRIMK 269

[Close]

BLAST of Csor.00g069860 vs. TAIR 10
Match: AT1G32361.1 (RING/U-box superfamily protein )

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-26
Identity = 87/254 (34.25%), Postives = 133/254 (52.36%), Query Frame = 0


Query: 59  PLTIILTLILLAFLLVGFFSIYFCRCIMDSLLH--SRNLRRSPSGNILHPSADSPTVPPG 118
           P+TI+LT  LL  +  GFFS +FC C+   L+   + +  R+   N++ PS  +P    G
Sbjct: 73  PVTIVLTGSLLFIIFTGFFSFFFCGCLFRKLMRIWNNHRNRNRPSNLIQPS--NPPENLG 132

Query: 119 LDPLLINTFPTFPYSGIKEFRSDKFGLECAICLLEFDDDSFLRLLTVCCHVFHQECIDLW 178
           LD  +I +FP +PYS +K+  +D    +C+ICL EF DD  +RL++ C H FH  CIDLW
Sbjct: 133 LDSKIIESFPEYPYS-VKDHGTD----QCSICLTEFMDDDTIRLISTCNHSFHTICIDLW 192

Query: 179 LESHKTCPVCRRNLDSDSARNSADKPPDSDHDNPPRSTHHES--IEDAISIDIDDD---- 238
            E HKTCPVCRR LD +  R S +KP +    +  RS  H+     D ++I + ++    
Sbjct: 193 FEGHKTCPVCRRELDVED-RTSLEKPLEVPEIDLVRSEIHDEPLPRDTVTIIVHEEHPST 252

Query: 239 -VDDDDNADADDDNDNRRSGSNRGKQSIKTEEAEDDGVKKFSRCHSTGHSILKARREDDD 298
            +   ++ D  +  + R   SN                 +F R HSTGHSI+     + +
Sbjct: 253 TIGSLEHTDEIESYERRMKASN----------------LRFWRSHSTGHSIVVKTENEQE 302

Query: 299 RYKLRLPEHVKIKI 304
             +    + +KI+I
Sbjct: 313 EEEEEEKDEIKIRI 302

The following BLAST results are available for this feature:

BLAST of Csor.00g069860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49691	2.2e-63	50.54	RING-H2 finger protein ATL29 OS=Arabidopsis thaliana OX=3702 GN=ATL29 PE=3 SV=1	[more]
Q9FIR0	2.2e-52	43.64	RING-H2 finger protein ATL30 OS=Arabidopsis thaliana OX=3702 GN=ATL30 PE=2 SV=1	[more]
Q6NKR1	2.0e-32	34.63	RING-H2 finger protein ATL28 OS=Arabidopsis thaliana OX=3702 GN=ATL28 PE=2 SV=1	[more]
Q8RXX9	2.1e-26	34.75	E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV...	[more]
Q9LQM2	2.3e-25	34.25	RING-H2 finger protein ATL81 OS=Arabidopsis thaliana OX=3702 GN=ATL81 PE=2 SV=1	[more]

BLAST of Csor.00g069860 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571655.1	2.00e-246	100.00	RING-H2 finger protein ATL29, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022963762.1	3.18e-243	98.84	RING-H2 finger protein ATL29 [Cucurbita moschata]	[more]
XP_023554783.1	3.38e-230	95.39	RING-H2 finger protein ATL29 [Cucurbita pepo subsp. pepo]	[more]
XP_022967655.1	6.51e-222	97.17	LOW QUALITY PROTEIN: RING-H2 finger protein ATL29-like, partial [Cucurbita maxim...	[more]
XP_038888539.1	9.07e-187	83.69	RING-H2 finger protein ATL29-like [Benincasa hispida]	[more]

BLAST of Csor.00g069860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HG37	1.54e-243	98.84	RING-H2 finger protein ATL29 OS=Cucurbita moschata OX=3662 GN=LOC111463956 PE=4 ...	[more]
A0A6J1HV34	3.15e-222	97.17	LOW QUALITY PROTEIN: RING-H2 finger protein ATL29-like OS=Cucurbita maxima OX=36...	[more]
A0A1S3CQ65	2.69e-174	78.25	RING-H2 finger protein ATL29-like OS=Cucumis melo OX=3656 GN=LOC103503555 PE=4 S...	[more]
A0A0A0LI09	1.15e-167	76.83	RING-H2 finger protein ATL29 OS=Cucumis sativus OX=3659 GN=Csa_3G901170 PE=4 SV=...	[more]
A0A6J1K7T3	1.19e-149	71.25	RING-H2 finger protein ATL29-like OS=Cucurbita maxima OX=3661 GN=LOC111491422 PE...	[more]

BLAST of Csor.00g069860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17920.1	1.5e-64	50.54	RING/U-box superfamily protein	[more]
AT5G46650.1	1.6e-53	43.64	RING/U-box superfamily protein	[more]
AT2G35420.1	1.4e-33	34.63	RING/U-box superfamily protein	[more]
AT3G05200.1	1.5e-27	34.75	RING/U-box superfamily protein	[more]
AT1G32361.1	1.7e-26	34.25	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 145..186 e-value: 1.5E-5 score: 34.5
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 144..187 e-value: 2.9E-13 score: 49.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 145..187 score: 12.415513
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 110..193 e-value: 1.7E-18 score: 68.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 324..345
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..268
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 223..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 241..268
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 193..222
None	No IPR available	PANTHER	PTHR14155:SF521	RING-H2 FINGER PROTEIN ATL29	coord: 46..320
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 46..320
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 144..187 e-value: 9.81452E-16 score: 68.4907
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 136..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g069860.m01	Csor.00g069860.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane