Csor.00g069840 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g069840
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RING-type E3 ubiquitin transferase
Location	Csor_Chr19: 1748031 .. 1749098 (-)
RNA-Seq Expression	Csor.00g069840
Synteny	Csor.00g069840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTCTTATGGCAGCCCTAAGACTTGGATACCTTATATGAGCAACAAAGATTGCTCTCAAGGTTTTTGTAGTGTATATTGTCCTCAATGGTGCTACATCATGTTGTCACCTCCACCACCCTTGGAGTTTCCTGATGATGATTCATCCCCAAATTTTTCACCTCTTGTTATAGCAATTATTGGAATTCTAGCAAGTGCTTTCCTTCTTTTAAGCTATTACACCATCATTTCAAAGTATTGTGGCAACACAAATCGCTTGTTTGGAACTGGCAATCATGACCCAAATGAGGAATTTGAAGATAATCATAACCCAACACTTCATGAACCATGGCATGTTGCCACAAATGGCTTGGATGAGGCAATGGTTAAGTCCATTACGGTTTGCAAGTACAAGAGAGGAGATGGGTTGGTTGAAGGCTCTGATTGCTCTGTTTGTCTTAGTGAGTTTCAAGAAGATGATAGCCTTAGGTTGTTGCCTAAATGCAGCCATGCTTTTCATCTTCAATGTATTGATACTTGGCTCAAATCACACTCCAATTGCCCGTTATGTCGTGCTAATATCGTCTCTGTCGATGCTTCTCCTCCCGTTCACCTTCCTGCAAGCAATGCATATCCCATAACTAATGAGACCATGCCAGAAACTTCTCAGACACATGACCCTGAGGCTGTTTCACAAGATTCAGAACGAAGTTTGAGAAGTGATTGTGGGAAGAACTCGGTTCGTGCCTTCAGTGACCTCGGAGTACCAGAGAAAAGAGACACTGTCATTGAGCTTAGAGACGGCGAATTGCAGCAAATTAGAAGGTCCATTTCAATGGATCATTGCAGCCAAAATCATATCATTATTGCGGATGTTCTACGTCTAAACGACGACGAGTATGAAGCAGGAAGTTCAGGTGATGTTGGATCATCCAAATGTTCAGTGGGAGAAGACAGCAAGTCCAGCCACAGAAAAACAATCCTGCATTGTGTTATGAGTCCTGTTTCGATTAAGAGATCGTTTTCAAGTGGAAGATTTTCTCTCATTAGGCATGGAAAAGAACAAAGAGAAATCGCCCGTGTCTGA

mRNA sequence

ATGGGGTCTTATGGCAGCCCTAAGACTTGGATACCTTATATGAGCAACAAAGATTGCTCTCAAGGTTTTTGTAGTGTATATTGTCCTCAATGGTGCTACATCATGTTGTCACCTCCACCACCCTTGGAGTTTCCTGATGATGATTCATCCCCAAATTTTTCACCTCTTGTTATAGCAATTATTGGAATTCTAGCAAGTGCTTTCCTTCTTTTAAGCTATTACACCATCATTTCAAAGTATTGTGGCAACACAAATCGCTTGTTTGGAACTGGCAATCATGACCCAAATGAGGAATTTGAAGATAATCATAACCCAACACTTCATGAACCATGGCATGTTGCCACAAATGGCTTGGATGAGGCAATGGTTAAGTCCATTACGGTTTGCAAGTACAAGAGAGGAGATGGGTTGGTTGAAGGCTCTGATTGCTCTGTTTGTCTTAGTGAGTTTCAAGAAGATGATAGCCTTAGGTTGTTGCCTAAATGCAGCCATGCTTTTCATCTTCAATGTATTGATACTTGGCTCAAATCACACTCCAATTGCCCGTTATGTCGTGCTAATATCGTCTCTGTCGATGCTTCTCCTCCCGTTCACCTTCCTGCAAGCAATGCATATCCCATAACTAATGAGACCATGCCAGAAACTTCTCAGACACATGACCCTGAGGCTGTTTCACAAGATTCAGAACGAAGTTTGAGAAGTGATTGTGGGAAGAACTCGGTTCGTGCCTTCAGTGACCTCGGAGTACCAGAGAAAAGAGACACTGTCATTGAGCTTAGAGACGGCGAATTGCAGCAAATTAGAAGGTCCATTTCAATGGATCATTGCAGCCAAAATCATATCATTATTGCGGATGTTCTACGTCTAAACGACGACGAGTATGAAGCAGGAAGTTCAGGTGATGTTGGATCATCCAAATGTTCAGTGGGAGAAGACAGCAAGTCCAGCCACAGAAAAACAATCCTGCATTGTGTTATGAGTCCTGTTTCGATTAAGAGATCGTTTTCAAGTGGAAGATTTTCTCTCATTAGGCATGGAAAAGAACAAAGAGAAATCGCCCGTGTCTGA

Coding sequence (CDS)

ATGGGGTCTTATGGCAGCCCTAAGACTTGGATACCTTATATGAGCAACAAAGATTGCTCTCAAGGTTTTTGTAGTGTATATTGTCCTCAATGGTGCTACATCATGTTGTCACCTCCACCACCCTTGGAGTTTCCTGATGATGATTCATCCCCAAATTTTTCACCTCTTGTTATAGCAATTATTGGAATTCTAGCAAGTGCTTTCCTTCTTTTAAGCTATTACACCATCATTTCAAAGTATTGTGGCAACACAAATCGCTTGTTTGGAACTGGCAATCATGACCCAAATGAGGAATTTGAAGATAATCATAACCCAACACTTCATGAACCATGGCATGTTGCCACAAATGGCTTGGATGAGGCAATGGTTAAGTCCATTACGGTTTGCAAGTACAAGAGAGGAGATGGGTTGGTTGAAGGCTCTGATTGCTCTGTTTGTCTTAGTGAGTTTCAAGAAGATGATAGCCTTAGGTTGTTGCCTAAATGCAGCCATGCTTTTCATCTTCAATGTATTGATACTTGGCTCAAATCACACTCCAATTGCCCGTTATGTCGTGCTAATATCGTCTCTGTCGATGCTTCTCCTCCCGTTCACCTTCCTGCAAGCAATGCATATCCCATAACTAATGAGACCATGCCAGAAACTTCTCAGACACATGACCCTGAGGCTGTTTCACAAGATTCAGAACGAAGTTTGAGAAGTGATTGTGGGAAGAACTCGGTTCGTGCCTTCAGTGACCTCGGAGTACCAGAGAAAAGAGACACTGTCATTGAGCTTAGAGACGGCGAATTGCAGCAAATTAGAAGGTCCATTTCAATGGATCATTGCAGCCAAAATCATATCATTATTGCGGATGTTCTACGTCTAAACGACGACGAGTATGAAGCAGGAAGTTCAGGTGATGTTGGATCATCCAAATGTTCAGTGGGAGAAGACAGCAAGTCCAGCCACAGAAAAACAATCCTGCATTGTGTTATGAGTCCTGTTTCGATTAAGAGATCGTTTTCAAGTGGAAGATTTTCTCTCATTAGGCATGGAAAAGAACAAAGAGAAATCGCCCGTGTCTGA

Protein sequence

MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAIIGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDEAMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSLRSDCGKNSVRAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLRLNDDEYEAGSSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGKEQREIARV

Homology

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BLAST of Csor.00g069840 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 2.8e-66
Identity = 163/371 (43.94%), Postives = 220/371 (59.30%), Query Frame = 0


Query: 6   SPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDD---SSPNFSPLVIAIIG 65
           +P  W PY S  DCSQG C++YCPQWCY++  PPPP  F DDD   SS +FSPL+IA+IG
Sbjct: 4   NPNPWSPYDSYNDCSQGICNIYCPQWCYLIFPPPPPSFFLDDDSSSSSSSFSPLLIALIG 63

Query: 66  ILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPT--LHEPWHVATN--GL 125
           IL SA +L+SYYT+ISKYC   ++         +E    NHN          ++TN  GL
Sbjct: 64  ILTSALILVSYYTLISKYCHRHHQT------SSSETLNLNHNGEGFFSSTQRISTNGDGL 123

Query: 126 DEAMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSH 185
           +E+M+KSITV KYK GDG V+GSDCSVCLSEF+E++SLRLLPKC+HAFHL CIDTWLKSH
Sbjct: 124 NESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSH 183

Query: 186 SNCPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQ------------ 245
           SNCPLCRA +  V+ +P   +  + +  + N    +++  H   +VS+            
Sbjct: 184 SNCPLCRAFVTGVN-NPTASVGQNVSVVVAN----QSNSAHQTGSVSEINLNLAGYESQT 243

Query: 246 ---DSERSLRS-DCGKNSVRAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHII 305
              DS   +   + G  +  A S+L +PE+R    E +D +   IRRS+S++  S   + 
Sbjct: 244 GDFDSVVVIEDLEIGSRNSDARSELQLPEERR---ETKDEDSLPIRRSVSLN--SGVVVS 303

Query: 306 IADVLRLNDDEYEAGSSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVS------IKRSFS 348
           IADVLR  +D  E G SG VG+S+    E+ +    KTI     +  S        RS S
Sbjct: 304 IADVLREIED--EEGESGGVGTSQRR--EEGEDGDGKTIPPTEANQRSGGVSGFFVRSLS 354

[Close]

BLAST of Csor.00g069840 vs. ExPASy Swiss-Prot
Match: Q7XLY8 (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 245.7 bits (626), Expect = 7.6e-64
Identity = 162/370 (43.78%), Postives = 202/370 (54.59%), Query Frame = 0


Query: 6   SPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEF----PDDDSSPNFSPLVIAII 65
           S   W+PY   +DCSQG CS+YCPQWCY +  PPPP +      DD S P FSPLVIAII
Sbjct: 4   SAPAWVPYEPTRDCSQGLCSMYCPQWCYFIFPPPPPFDVAGTSADDSSGPVFSPLVIAII 63

Query: 66  GILASAFLLLSYYTIISKYCGNTN----RLFGT-------GNHDPNEEFEDNHNPTLHEP 125
           G+LASAFLL+SYYT ISKYCG  +    R+FG+       G    +     +     HE 
Sbjct: 64  GVLASAFLLVSYYTFISKYCGTVSSLRGRVFGSSSGGAAYGGGAGSGGRHGHGQSRSHES 123

Query: 126 WHVA-TNGLDEAMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQ 185
           W+V+  +GLDE ++  ITVCKY+RGDG V  +DCSVCL EF + +SLRLLP+CSHAFH Q
Sbjct: 124 WNVSPPSGLDETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQ 183

Query: 186 CIDTWLKSHSNCPLCRANIVSVD---ASPPVH--LPASNAYPITNETMP-----ETSQTH 245
           CIDTWLKSHSNCPLCRANI  V    ASP      P       T+E +      E     
Sbjct: 184 CIDTWLKSHSNCPLCRANITFVTVGLASPEPEGCAPGETGGDNTHEVVVVMDGLENLCEE 243

Query: 246 DPEAVSQDSERSLRSDCGKNSVRAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQN 305
             EAVS+ S      D  K+           E+ +   E+R+      R + S D    N
Sbjct: 244 QQEAVSRASTADDDHD-AKDVAEGM------EEANGAAEIREEGSPPKRGASSFDLHRDN 303

Query: 306 HIIIADVLRLN-DDEYEAGS-----SGDVGSSKCSVGEDSKS----SHRKTILHCVMSPV 340
            + IADVL+ + +DE  A       +G  G+S+   GE+SK     S R   L   M  +
Sbjct: 304 RMCIADVLQESMEDELTAARESGLLAGGAGTSRRCHGENSKGRGGRSRRALQLQDAMEAL 363

[Close]

BLAST of Csor.00g069840 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 238.0 bits (606), Expect = 1.6e-61
Identity = 159/336 (47.32%), Postives = 200/336 (59.52%), Query Frame = 0


Query: 1   MGSYGSPKTW-IPYMSNKDCSQGFCSVYCPQWCYIMLSPPPP--LEFPDDDSSPNFSPLV 60
           MGS G+P  W   Y S +DCSQG CSVYCPQWCY++  PPP   L+  DD SS +FSPL+
Sbjct: 1   MGSTGNPNPWGTTYDSYRDCSQGVCSVYCPQWCYVIFPPPPSFYLDDEDDSSSSDFSPLL 60

Query: 61  IAIIGILASAFLLLSYYTIISKYC------------GNTNRLFG----TGNHDPNEEFED 120
           IA+IGILASAF+L+SYYT+ISKYC               NR+       G ++ N     
Sbjct: 61  IALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGAT 120

Query: 121 NHNPTLHEPWHVATNGLDEAMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPK 180
           N N T+        +GLDE+++KSITV KY++ DG VE SDCSVCLSEFQE++SLRLLPK
Sbjct: 121 NPNQTIGGG---GGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPK 180

Query: 181 CSHAFHLQCIDTWLKSHSNCPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDP 240
           C+HAFH+ CIDTWLKSHSNCPLCRA IV+  A   V L  +N   +T      T      
Sbjct: 181 CNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDL--TNQQIVTENNSISTGD-DSV 240

Query: 241 EAVSQDSERSLRSDCGKNSVRAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHI 300
             V+ D E S   +    +V   S    PE +D+    RDGE    RRS S+ +     +
Sbjct: 241 VVVNLDLENSRSRN---ETVNEGSTPKPPEMQDS----RDGE---ERRSASL-NSGGGVV 300

Query: 301 IIADVLR-LNDDEYEAGSSGDVGSSK-CSVGEDSKS 316
            IAD+LR + DDE  AG    VG+S+    GE  K+
Sbjct: 301 SIADILREIEDDEESAG----VGTSRWVEEGEGEKT 315

[Close]

BLAST of Csor.00g069840 vs. ExPASy Swiss-Prot
Match: P0C041 (Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 PE=3 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 1.0e-47
Identity = 102/210 (48.57%), Postives = 132/210 (62.86%), Query Frame = 0


Query: 1   MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWC-YIMLSPPPPL--EFPDDD--SSPNFSP 60
           M S  +P  W  Y++ +DC+QG CS +CPQWC YI  SPPP    +F +D   S+PN SP
Sbjct: 1   MESDPNPSAWNQYINPRDCTQGLCSTFCPQWCTYINFSPPPISYEQFLNDGVASNPNLSP 60

Query: 61  LVIAIIGILASAFLLLSYYTIISKYCGN--TNRLFG-TGNHDPNEEFEDNHNPTLHEPWH 120
           LVIAI GI A+AFLL +YYT++SKYC N  TN     +G  D   +          +P+ 
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQDDPFA 120

Query: 121 V--ATNGLDEAMVKSITVCKYKRGDG--LVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHL 180
           +  +T GLD+ ++K I   K K+      + G+DCS+CL EF ED+SLRLLPKC+H FH+
Sbjct: 121 LESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHV 180

Query: 181 QCIDTWLKSHSNCPLCRANIVSVDASPPVH 199
            CID WLKSHSNCPLCRA I+      P H
Sbjct: 181 VCIDRWLKSHSNCPLCRAKIIVPTTQQPEH 210

[Close]

BLAST of Csor.00g069840 vs. ExPASy Swiss-Prot
Match: Q8LFY8 (RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2)

HSP 1 Score: 156.4 bits (394), Expect = 6.1e-37
Identity = 95/266 (35.71%), Postives = 131/266 (49.25%), Query Frame = 0


Query: 18  DCSQGFCSVYCPQWC-----YIMLSPPPP------------------LEFPDDDSSPNFS 77
           DCS G C   CP  C     Y  +SP  P                  +  P  DSS +  
Sbjct: 22  DCSNGVCDPICPYNCYPEPDYYTISPQLPPWSSSPQPSPCPSPSISAVYLPSQDSSSSLD 81

Query: 78  PLVIAIIGILASAFLLLSYYTIISKYCGNTNRL----FGTGNHDPN----EEFEDNHNPT 137
            + I  I     A LL  ++ +   +  + NR+    + + N D +    EEF+D     
Sbjct: 82  AISIITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQDREQVD 141

Query: 138 LHEPWHVATNGLDEAMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAF 197
            H  W + T GL ++++ SIT+C YKRGDGL+E +DC VCL+EF+ED+SLRLLPKC+HAF
Sbjct: 142 -HPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAF 201

Query: 198 HLQCIDTWLKSHSNCPLCRANIVSVDASPPVH------LPASNAYPITNETMPETSQTHD 247
           H+ CIDTWL SH+NCPLCRA I  +  + P +       P  +   + N+ + E      
Sbjct: 202 HISCIDTWLSSHTNCPLCRAGIAMISVTTPRYSGPVEVTPGGSGSHLENDGVDEEDHGEI 261

[Close]

BLAST of Csor.00g069840 vs. NCBI nr
Match: KAG6571657.1 (E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 723 bits (1865), Expect = 5.24e-263
Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0


Query: 1   MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAI 60
           MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAI
Sbjct: 1   MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAI 60

Query: 61  IGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDE 120
           IGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDE
Sbjct: 61  IGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDE 120

Query: 121 AMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSN 180
           AMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSN
Sbjct: 121 AMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSN 180

Query: 181 CPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSLRSDCGKNS 240
           CPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSLRSDCGKNS
Sbjct: 181 CPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSLRSDCGKNS 240

Query: 241 VRAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLRLNDDEYEAGSSG 300
           VRAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLRLNDDEYEAGSSG
Sbjct: 241 VRAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLRLNDDEYEAGSSG 300

Query: 301 DVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGKEQREIARV 355
           DVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGKEQREIARV
Sbjct: 301 DVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGKEQREIARV 355

[Close]

BLAST of Csor.00g069840 vs. NCBI nr
Match: XP_023553748.1 (RING-H2 finger protein ATL52-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 713 bits (1840), Expect = 3.39e-259
Identity = 350/355 (98.59%), Postives = 352/355 (99.15%), Query Frame = 0


Query: 1   MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAI 60
           MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAI
Sbjct: 1   MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAI 60

Query: 61  IGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDE 120
           IGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDE
Sbjct: 61  IGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDE 120

Query: 121 AMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSN 180
           AMVKSIT+CKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSN
Sbjct: 121 AMVKSITICKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSN 180

Query: 181 CPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSLRSDCGKNS 240
           CPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERS RS+CGKNS
Sbjct: 181 CPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSFRSNCGKNS 240

Query: 241 VRAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLRLNDDEYEAGSSG 300
           VRAFSDLGV EKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLRLNDDEYEAGSSG
Sbjct: 241 VRAFSDLGVLEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLRLNDDEYEAGSSG 300

Query: 301 DVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGKEQREIARV 355
           DVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGKE REIARV
Sbjct: 301 DVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGKEHREIARV 355

[Close]

BLAST of Csor.00g069840 vs. NCBI nr
Match: XP_022967441.1 (RING-H2 finger protein ATL52-like [Cucurbita maxima])

HSP 1 Score: 712 bits (1838), Expect = 6.85e-259
Identity = 350/355 (98.59%), Postives = 351/355 (98.87%), Query Frame = 0


Query: 1   MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAI 60
           MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAI
Sbjct: 1   MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAI 60

Query: 61  IGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDE 120
           IGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDE
Sbjct: 61  IGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDE 120

Query: 121 AMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSN 180
           AMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSN
Sbjct: 121 AMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSN 180

Query: 181 CPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSLRSDCGKNS 240
           CPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSLRSDCGK +
Sbjct: 181 CPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSLRSDCGKTT 240

Query: 241 VRAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLRLNDDEYEAGSSG 300
           VRAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVL LNDDEYEAGSSG
Sbjct: 241 VRAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLHLNDDEYEAGSSG 300

Query: 301 DVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGKEQREIARV 355
           DVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGKE  EIARV
Sbjct: 301 DVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGKEHWEIARV 355

[Close]

BLAST of Csor.00g069840 vs. NCBI nr
Match: KAG7011386.1 (E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 634 bits (1636), Expect = 1.18e-228
Identity = 317/321 (98.75%), Postives = 319/321 (99.38%), Query Frame = 0


Query: 35  MLSPPPPLEFPDDDSSPNFSPLVIAIIGILASAFLLLSYYTIISKYCGNTNRLFGTGNHD 94
           MLSPPPPLEFPDDDSSPNFSPLVIAIIGILASAFLLLSYYTIISKYCGNTNRLFGTGNHD
Sbjct: 1   MLSPPPPLEFPDDDSSPNFSPLVIAIIGILASAFLLLSYYTIISKYCGNTNRLFGTGNHD 60

Query: 95  PNEEFEDNHNPTLHEPWHVATNGLDEAMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDD 154
           PNEEFEDNHNPTLHEPWHVATNGLDEAMVKSITVCKYKRGDGLVEGSDCSVCL+EFQEDD
Sbjct: 61  PNEEFEDNHNPTLHEPWHVATNGLDEAMVKSITVCKYKRGDGLVEGSDCSVCLNEFQEDD 120

Query: 155 SLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVDASPPVHLPASNAYPITNETMPE 214
           SLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVDASPPVHLPASNAYPITNETMPE
Sbjct: 121 SLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVDASPPVHLPASNAYPITNETMPE 180

Query: 215 TSQTHDPEAVSQDSERSLRSDCGKNSVRAFSDLGVPEKRDTVIELRDGELQQIRRSISMD 274
           TSQT DPEAVSQDSERSLRSDCGKNSVRAFSDLGVPEKRDTVIELRDGELQQIRRSISMD
Sbjct: 181 TSQTRDPEAVSQDSERSLRSDCGKNSVRAFSDLGVPEKRDTVIELRDGELQQIRRSISMD 240

Query: 275 HCSQNHIIIADVLRLNDDEYEAGSSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRS 334
           HCSQNHIIIADVLRLNDDEYEAGSSGDVGSSKCSVGEDS+SSHRKTILHCVMSPVSIKRS
Sbjct: 241 HCSQNHIIIADVLRLNDDEYEAGSSGDVGSSKCSVGEDSRSSHRKTILHCVMSPVSIKRS 300

Query: 335 FSSGRFSLIRHGKEQREIARV 355
           FS GRFSLIRHGKEQREIARV
Sbjct: 301 FSGGRFSLIRHGKEQREIARV 321

[Close]

BLAST of Csor.00g069840 vs. NCBI nr
Match: KAA0038569.1 (E3 ubiquitin-protein ligase [Cucumis melo var. makuwa] >TYK31174.1 E3 ubiquitin-protein ligase [Cucumis melo var. makuwa])

HSP 1 Score: 607 bits (1564), Expect = 7.86e-217
Identity = 299/358 (83.52%), Postives = 326/358 (91.06%), Query Frame = 0


Query: 2   GSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAII 61
           GSYG+PKTWIPYMSNKDCSQGFCSVYCPQWCYIM SPPPPLEFPDD+S PNFSPLVIAII
Sbjct: 4   GSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGPNFSPLVIAII 63

Query: 62  GILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDEA 121
           GILASA LL++YYTIISKYCGNTNRL GTGN+DP+EE+EDNHNPTLHEPWHVAT GLDEA
Sbjct: 64  GILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSEEYEDNHNPTLHEPWHVATTGLDEA 123

Query: 122 MVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSNC 181
           ++KSITVCKYKRGDGLVEGSDCSVCLSEFQED+SLRLLPKCSHAFHLQCIDTWLKSHSNC
Sbjct: 124 LIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNC 183

Query: 182 PLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSLRSDCGKNSV 241
           PLCRANI+S++A  PV LPAS AYPITNET+PE+SQ +D EAVS DS +S  ++  KNSV
Sbjct: 184 PLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQSFSNEDAKNSV 243

Query: 242 RAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLRLNDDEY----EAG 301
           RAFSDLG  EKRDT+IELRDG LQQIRRSISMDHCSQN +IIADVLRLN+DE+    EAG
Sbjct: 244 RAFSDLGNLEKRDTIIELRDGRLQQIRRSISMDHCSQNRLIIADVLRLNEDEFGGIDEAG 303

Query: 302 SSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGKEQREIARV 355
           SSGDVGSSK SVGEDS+SSHRK ILHCVMSPVS+KRSFSSGR SL +HG+E R IA V
Sbjct: 304 SSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAPV 361

[Close]

BLAST of Csor.00g069840 vs. ExPASy TrEMBL
Match: A0A6J1HS24 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111466980 PE=3 SV=1)

HSP 1 Score: 712 bits (1838), Expect = 3.31e-259
Identity = 350/355 (98.59%), Postives = 351/355 (98.87%), Query Frame = 0


Query: 1   MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAI 60
           MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAI
Sbjct: 1   MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAI 60

Query: 61  IGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDE 120
           IGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDE
Sbjct: 61  IGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDE 120

Query: 121 AMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSN 180
           AMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSN
Sbjct: 121 AMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSN 180

Query: 181 CPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSLRSDCGKNS 240
           CPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSLRSDCGK +
Sbjct: 181 CPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSLRSDCGKTT 240

Query: 241 VRAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLRLNDDEYEAGSSG 300
           VRAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVL LNDDEYEAGSSG
Sbjct: 241 VRAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLHLNDDEYEAGSSG 300

Query: 301 DVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGKEQREIARV 355
           DVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGKE  EIARV
Sbjct: 301 DVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGKEHWEIARV 355

[Close]

BLAST of Csor.00g069840 vs. ExPASy TrEMBL
Match: A0A5D3E5F1 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004560 PE=3 SV=1)

HSP 1 Score: 607 bits (1564), Expect = 3.81e-217
Identity = 299/358 (83.52%), Postives = 326/358 (91.06%), Query Frame = 0


Query: 2   GSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAII 61
           GSYG+PKTWIPYMSNKDCSQGFCSVYCPQWCYIM SPPPPLEFPDD+S PNFSPLVIAII
Sbjct: 4   GSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGPNFSPLVIAII 63

Query: 62  GILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDEA 121
           GILASA LL++YYTIISKYCGNTNRL GTGN+DP+EE+EDNHNPTLHEPWHVAT GLDEA
Sbjct: 64  GILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSEEYEDNHNPTLHEPWHVATTGLDEA 123

Query: 122 MVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSNC 181
           ++KSITVCKYKRGDGLVEGSDCSVCLSEFQED+SLRLLPKCSHAFHLQCIDTWLKSHSNC
Sbjct: 124 LIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNC 183

Query: 182 PLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSLRSDCGKNSV 241
           PLCRANI+S++A  PV LPAS AYPITNET+PE+SQ +D EAVS DS +S  ++  KNSV
Sbjct: 184 PLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQSFSNEDAKNSV 243

Query: 242 RAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLRLNDDEY----EAG 301
           RAFSDLG  EKRDT+IELRDG LQQIRRSISMDHCSQN +IIADVLRLN+DE+    EAG
Sbjct: 244 RAFSDLGNLEKRDTIIELRDGRLQQIRRSISMDHCSQNRLIIADVLRLNEDEFGGIDEAG 303

Query: 302 SSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGKEQREIARV 355
           SSGDVGSSK SVGEDS+SSHRK ILHCVMSPVS+KRSFSSGR SL +HG+E R IA V
Sbjct: 304 SSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAPV 361

[Close]

BLAST of Csor.00g069840 vs. ExPASy TrEMBL
Match: A0A1S4E5H2 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103503554 PE=3 SV=1)

HSP 1 Score: 605 bits (1561), Expect = 1.09e-216
Identity = 299/358 (83.52%), Postives = 325/358 (90.78%), Query Frame = 0


Query: 2   GSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAII 61
           GSYG+PKTWIPYMSNKDCSQGFCSVYCPQWCYIM SPPPPLEFPDD+S PNFSPLVIAII
Sbjct: 4   GSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGPNFSPLVIAII 63

Query: 62  GILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDEA 121
           GILASA LL++YYTIISKYCGNTNRL GTGN+DP+EE+EDNHNPTLHEPWHVAT GLDEA
Sbjct: 64  GILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSEEYEDNHNPTLHEPWHVATTGLDEA 123

Query: 122 MVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSNC 181
           ++KSITVCKYKRGDGLVEGSDCSVCLSEFQED+SLRLLPKCSHAFHLQCIDTWLKSHSNC
Sbjct: 124 LIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNC 183

Query: 182 PLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSLRSDCGKNSV 241
           PLCRANI+S++A  PV LPAS AYPITNET+PE+SQ +D EAVS DS +S  ++  KNSV
Sbjct: 184 PLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQSFSNEDAKNSV 243

Query: 242 RAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLRLNDDEY----EAG 301
           RAFSDLG  EKRDT IELRDG LQQIRRSISMDHCSQN +IIADVLRLN+DE+    EAG
Sbjct: 244 RAFSDLGNLEKRDTTIELRDGRLQQIRRSISMDHCSQNRLIIADVLRLNEDEFGGIDEAG 303

Query: 302 SSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGKEQREIARV 355
           SSGDVGSSK SVGEDS+SSHRK ILHCVMSPVS+KRSFSSGR SL +HG+E R IA V
Sbjct: 304 SSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAPV 361

[Close]

BLAST of Csor.00g069840 vs. ExPASy TrEMBL
Match: A0A0A0LH71 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G901190 PE=3 SV=1)

HSP 1 Score: 604 bits (1557), Expect = 4.27e-216
Identity = 300/358 (83.80%), Postives = 326/358 (91.06%), Query Frame = 0


Query: 2   GSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAII 61
           GSYG+PKTWIPYMSNKDCSQGFCSVYCPQWCYIM SPPPPLEFPD+ S P+FSPLVIAII
Sbjct: 4   GSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDN-SGPHFSPLVIAII 63

Query: 62  GILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDEA 121
           GILASAFLL++YYTIISKYCGNTNRL GTGNHDP+EE+EDNHNPT HEPWHVAT GLDEA
Sbjct: 64  GILASAFLLVTYYTIISKYCGNTNRLSGTGNHDPSEEYEDNHNPTFHEPWHVATTGLDEA 123

Query: 122 MVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSNC 181
           ++KSITVCKYKR DGLVEGSDCSVCLSEFQED+SLRLLPKCSHAFHLQCIDTWLKSHSNC
Sbjct: 124 LIKSITVCKYKREDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNC 183

Query: 182 PLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSLRSDCGKNSV 241
           PLCRANI+S++A  PV LPAS AYPITNET+PETSQ +D EAVS DS +S  ++ GKNSV
Sbjct: 184 PLCRANIISINAGSPVQLPASTAYPITNETVPETSQDNDYEAVSLDSGQSFSNEDGKNSV 243

Query: 242 RAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLRLNDDEY----EAG 301
           RAFSDLG  EKRDT+IELRDG LQQIRRSISMDHCSQNHIIIADVLRLN+D++    EAG
Sbjct: 244 RAFSDLGNLEKRDTIIELRDGRLQQIRRSISMDHCSQNHIIIADVLRLNEDDFGGIDEAG 303

Query: 302 SSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGKEQREIARV 355
           SSGDVGSSK SVGEDS+SSHRK ILHCVMSPVS+KRSFSSGR SL +HG+E R IA V
Sbjct: 304 SSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAPV 360

[Close]

BLAST of Csor.00g069840 vs. ExPASy TrEMBL
Match: A0A6J1E013 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111026146 PE=3 SV=1)

HSP 1 Score: 598 bits (1542), Expect = 1.75e-212
Identity = 301/366 (82.24%), Postives = 317/366 (86.61%), Query Frame = 0


Query: 1   MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDDSSPNFSPLVIAI 60
           MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIM SPPPPLEFPDDDS PNFSPLVIAI
Sbjct: 92  MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDDSGPNFSPLVIAI 151

Query: 61  IGILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPTLHEPWHVATNGLDE 120
           IGILASAFLL+SYYTIISKYCGNTNRL  TGNHDPNEEFEDNHNPTLHEPWH+AT GLDE
Sbjct: 152 IGILASAFLLVSYYTIISKYCGNTNRLSRTGNHDPNEEFEDNHNPTLHEPWHIATTGLDE 211

Query: 121 AMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSN 180
           A++KSITVCKYKRGDGLVEGSDC+VCLSEFQED+SLRLLPKCSHAFHLQCIDTW KSHSN
Sbjct: 212 ALIKSITVCKYKRGDGLVEGSDCAVCLSEFQEDESLRLLPKCSHAFHLQCIDTWFKSHSN 271

Query: 181 CPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSLRSD----- 240
           CPLCRA IVS  AS P  LP S A PIT+E MPETS T D +AVSQDS RS  +D     
Sbjct: 272 CPLCRAYIVSFSASSPFQLPPSTAVPITSEAMPETSHTTDHDAVSQDSGRSFGNDDLMQA 331

Query: 241 --CGKNSVRAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLRLNDDE 300
             C KNS RA SDLG  EKRDTVIELRDG LQQIRRSISMDHC QNH IIAD+L+LN+D 
Sbjct: 332 HNCAKNSFRALSDLGNLEKRDTVIELRDGRLQQIRRSISMDHCCQNHTIIADILQLNEDG 391

Query: 301 Y----EAGSSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVSIKRSFSSGRFSLIRHGKEQ 355
           +    E+GSSGDVGSSK SVGEDSKSSHRK ILHCVMSPVS+KRSFSSGRFSL RHG+E 
Sbjct: 392 FGAIDESGSSGDVGSSKHSVGEDSKSSHRKRILHCVMSPVSMKRSFSSGRFSLTRHGREH 451

[Close]

BLAST of Csor.00g069840 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 253.8 bits (647), Expect = 2.0e-67
Identity = 163/371 (43.94%), Postives = 220/371 (59.30%), Query Frame = 0


Query: 6   SPKTWIPYMSNKDCSQGFCSVYCPQWCYIMLSPPPPLEFPDDD---SSPNFSPLVIAIIG 65
           +P  W PY S  DCSQG C++YCPQWCY++  PPPP  F DDD   SS +FSPL+IA+IG
Sbjct: 4   NPNPWSPYDSYNDCSQGICNIYCPQWCYLIFPPPPPSFFLDDDSSSSSSSFSPLLIALIG 63

Query: 66  ILASAFLLLSYYTIISKYCGNTNRLFGTGNHDPNEEFEDNHNPT--LHEPWHVATN--GL 125
           IL SA +L+SYYT+ISKYC   ++         +E    NHN          ++TN  GL
Sbjct: 64  ILTSALILVSYYTLISKYCHRHHQT------SSSETLNLNHNGEGFFSSTQRISTNGDGL 123

Query: 126 DEAMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSH 185
           +E+M+KSITV KYK GDG V+GSDCSVCLSEF+E++SLRLLPKC+HAFHL CIDTWLKSH
Sbjct: 124 NESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSH 183

Query: 186 SNCPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQ------------ 245
           SNCPLCRA +  V+ +P   +  + +  + N    +++  H   +VS+            
Sbjct: 184 SNCPLCRAFVTGVN-NPTASVGQNVSVVVAN----QSNSAHQTGSVSEINLNLAGYESQT 243

Query: 246 ---DSERSLRS-DCGKNSVRAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHII 305
              DS   +   + G  +  A S+L +PE+R    E +D +   IRRS+S++  S   + 
Sbjct: 244 GDFDSVVVIEDLEIGSRNSDARSELQLPEERR---ETKDEDSLPIRRSVSLN--SGVVVS 303

Query: 306 IADVLRLNDDEYEAGSSGDVGSSKCSVGEDSKSSHRKTILHCVMSPVS------IKRSFS 348
           IADVLR  +D  E G SG VG+S+    E+ +    KTI     +  S        RS S
Sbjct: 304 IADVLREIED--EEGESGGVGTSQRR--EEGEDGDGKTIPPTEANQRSGGVSGFFVRSLS 354

[Close]

BLAST of Csor.00g069840 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 238.0 bits (606), Expect = 1.1e-62
Identity = 159/336 (47.32%), Postives = 200/336 (59.52%), Query Frame = 0


Query: 1   MGSYGSPKTW-IPYMSNKDCSQGFCSVYCPQWCYIMLSPPPP--LEFPDDDSSPNFSPLV 60
           MGS G+P  W   Y S +DCSQG CSVYCPQWCY++  PPP   L+  DD SS +FSPL+
Sbjct: 1   MGSTGNPNPWGTTYDSYRDCSQGVCSVYCPQWCYVIFPPPPSFYLDDEDDSSSSDFSPLL 60

Query: 61  IAIIGILASAFLLLSYYTIISKYC------------GNTNRLFG----TGNHDPNEEFED 120
           IA+IGILASAF+L+SYYT+ISKYC               NR+       G ++ N     
Sbjct: 61  IALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGAT 120

Query: 121 NHNPTLHEPWHVATNGLDEAMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPK 180
           N N T+        +GLDE+++KSITV KY++ DG VE SDCSVCLSEFQE++SLRLLPK
Sbjct: 121 NPNQTIGGG---GGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPK 180

Query: 181 CSHAFHLQCIDTWLKSHSNCPLCRANIVSVDASPPVHLPASNAYPITNETMPETSQTHDP 240
           C+HAFH+ CIDTWLKSHSNCPLCRA IV+  A   V L  +N   +T      T      
Sbjct: 181 CNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDL--TNQQIVTENNSISTGD-DSV 240

Query: 241 EAVSQDSERSLRSDCGKNSVRAFSDLGVPEKRDTVIELRDGELQQIRRSISMDHCSQNHI 300
             V+ D E S   +    +V   S    PE +D+    RDGE    RRS S+ +     +
Sbjct: 241 VVVNLDLENSRSRN---ETVNEGSTPKPPEMQDS----RDGE---ERRSASL-NSGGGVV 300

Query: 301 IIADVLR-LNDDEYEAGSSGDVGSSK-CSVGEDSKS 316
            IAD+LR + DDE  AG    VG+S+    GE  K+
Sbjct: 301 SIADILREIEDDEESAG----VGTSRWVEEGEGEKT 315

[Close]

BLAST of Csor.00g069840 vs. TAIR 10
Match: AT4G17905.1 (RING/U-box superfamily protein )

HSP 1 Score: 192.2 bits (487), Expect = 7.1e-49
Identity = 102/210 (48.57%), Postives = 132/210 (62.86%), Query Frame = 0


Query: 1   MGSYGSPKTWIPYMSNKDCSQGFCSVYCPQWC-YIMLSPPPPL--EFPDDD--SSPNFSP 60
           M S  +P  W  Y++ +DC+QG CS +CPQWC YI  SPPP    +F +D   S+PN SP
Sbjct: 1   MESDPNPSAWNQYINPRDCTQGLCSTFCPQWCTYINFSPPPISYEQFLNDGVASNPNLSP 60

Query: 61  LVIAIIGILASAFLLLSYYTIISKYCGN--TNRLFG-TGNHDPNEEFEDNHNPTLHEPWH 120
           LVIAI GI A+AFLL +YYT++SKYC N  TN     +G  D   +          +P+ 
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQDDPFA 120

Query: 121 V--ATNGLDEAMVKSITVCKYKRGDG--LVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHL 180
           +  +T GLD+ ++K I   K K+      + G+DCS+CL EF ED+SLRLLPKC+H FH+
Sbjct: 121 LESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHV 180

Query: 181 QCIDTWLKSHSNCPLCRANIVSVDASPPVH 199
            CID WLKSHSNCPLCRA I+      P H
Sbjct: 181 VCIDRWLKSHSNCPLCRAKIIVPTTQQPEH 210

[Close]

BLAST of Csor.00g069840 vs. TAIR 10
Match: AT1G72220.1 (RING/U-box superfamily protein )

HSP 1 Score: 156.4 bits (394), Expect = 4.3e-38
Identity = 95/266 (35.71%), Postives = 131/266 (49.25%), Query Frame = 0


Query: 18  DCSQGFCSVYCPQWC-----YIMLSPPPP------------------LEFPDDDSSPNFS 77
           DCS G C   CP  C     Y  +SP  P                  +  P  DSS +  
Sbjct: 22  DCSNGVCDPICPYNCYPEPDYYTISPQLPPWSSSPQPSPCPSPSISAVYLPSQDSSSSLD 81

Query: 78  PLVIAIIGILASAFLLLSYYTIISKYCGNTNRL----FGTGNHDPN----EEFEDNHNPT 137
            + I  I     A LL  ++ +   +  + NR+    + + N D +    EEF+D     
Sbjct: 82  AISIITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQDREQVD 141

Query: 138 LHEPWHVATNGLDEAMVKSITVCKYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAF 197
            H  W + T GL ++++ SIT+C YKRGDGL+E +DC VCL+EF+ED+SLRLLPKC+HAF
Sbjct: 142 -HPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAF 201

Query: 198 HLQCIDTWLKSHSNCPLCRANIVSVDASPPVH------LPASNAYPITNETMPETSQTHD 247
           H+ CIDTWL SH+NCPLCRA I  +  + P +       P  +   + N+ + E      
Sbjct: 202 HISCIDTWLSSHTNCPLCRAGIAMISVTTPRYSGPVEVTPGGSGSHLENDGVDEEDHGEI 261

[Close]

BLAST of Csor.00g069840 vs. TAIR 10
Match: AT4G33565.1 (RING/U-box superfamily protein )

HSP 1 Score: 142.9 bits (359), Expect = 5.0e-34
Identity = 101/300 (33.67%), Postives = 154/300 (51.33%), Query Frame = 0


Query: 22  GFCSVY----CPQWCYIML--SPPPPLEFPDDDSSPNFSPLVIAIIGILASAFLLLSYYT 81
           G+CS Y    CP  C I++     PP E   DD+      L+I+   I+ + F LL+   
Sbjct: 87  GYCSSYCLDECPSICEIVVISGLSPPAEIHHDDNLKRI--LIISASSIITTLF-LLTLLV 146

Query: 82  IISKYCGNTNRLFGTGNHDPNEEFE----DNHNPTL--HEPWHVATNGLDEAMVKSITVC 141
           +  K+     R   T      EE      D   P +  H  WH+ T GL+  ++ SI VC
Sbjct: 147 LCFKFYYRRRRSITTSRRWSMEEARNWDFDGPAPVIVDHPIWHIRTIGLNPTVISSIKVC 206

Query: 142 KYKRGDGLVEGSDCSVCLSEFQEDDSLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIV 201
           +Y + DG+VEG+DCSVCLSEF+E+++LRLLPKC HAFHL CIDTWL+SH+NCPLCRA IV
Sbjct: 207 QYSKKDGVVEGTDCSVCLSEFEEEETLRLLPKCKHAFHLYCIDTWLRSHTNCPLCRAPIV 266

Query: 202 SVDASPPVHLPASNAYPITNETMPETSQTHDPEAVSQDSERSLRSDCGKNSVRAFSDLGV 261
             +     H          +E + E S    PE    D++  +  +          D G 
Sbjct: 267 EANTMIDDH----------SEGLEEIS-VMIPEENGDDTDEEIEEERDGFVSNISRDHG- 326

Query: 262 PEKRDTVIELRDGELQQIRRSISMDHCSQNHIIIADVLRLNDDEYEAGSSGDVGSSKCSV 310
                      + + Q++RRS+S+D  S + + +++V+ +  ++ +     ++GS + S+
Sbjct: 327 -----------ESQQQRVRRSVSLD--SLSGLRVSEVV-VGREKEKLKRGNNIGSGRSSL 357

The following BLAST results are available for this feature:

BLAST of Csor.00g069840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LF64	2.8e-66	43.94	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q7XLY8	7.6e-64	43.78	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=3994...	[more]
Q9SRQ8	1.6e-61	47.32	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]
P0C041	1.0e-47	48.57	Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 P...	[more]
Q8LFY8	6.1e-37	35.71	RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2	[more]

BLAST of Csor.00g069840 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571657.1	5.24e-263	100.00	E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023553748.1	3.39e-259	98.59	RING-H2 finger protein ATL52-like [Cucurbita pepo subsp. pepo]	[more]
XP_022967441.1	6.85e-259	98.59	RING-H2 finger protein ATL52-like [Cucurbita maxima]	[more]
KAG7011386.1	1.18e-228	98.75	E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
KAA0038569.1	7.86e-217	83.52	E3 ubiquitin-protein ligase [Cucumis melo var. makuwa] >TYK31174.1 E3 ubiquitin-...	[more]

BLAST of Csor.00g069840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HS24	3.31e-259	98.59	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111466980 P...	[more]
A0A5D3E5F1	3.81e-217	83.52	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S4E5H2	1.09e-216	83.52	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103503554 PE=3 ...	[more]
A0A0A0LH71	4.27e-216	83.80	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G901190 PE...	[more]
A0A6J1E013	1.75e-212	82.24	RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC11102614...	[more]

BLAST of Csor.00g069840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17600.1	2.0e-67	43.94	RING/U-box superfamily protein	[more]
AT3G03550.1	1.1e-62	47.32	RING/U-box superfamily protein	[more]
AT4G17905.1	7.1e-49	48.57	RING/U-box superfamily protein	[more]
AT1G72220.1	4.3e-38	35.71	RING/U-box superfamily protein	[more]
AT4G33565.1	5.0e-34	33.67	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 143..184 e-value: 8.2E-8 score: 42.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 142..185 e-value: 4.9E-14 score: 52.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 143..185 score: 13.020386
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 118..193 e-value: 4.5E-22 score: 79.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..236
None	No IPR available	PANTHER	PTHR45676:SF108	E3 UBIQUITIN-PROTEIN LIGASE OS04G0590900-LIKE	coord: 6..345
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 142..185 e-value: 2.54649E-16 score: 70.0233
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 137..193
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 6..345

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g069840.m01	Csor.00g069840.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane