Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCTTCGGAATAGGAATTTGTTCTGCAGCGAGACGTTTGTCAAGTTCTTATGGAGGATATGGTTCTTCAAGTGGTCATGGTTATAGTAGCTATGCTTCCGTAGGGGAATATGGTGTTGAAAATTATGGCAATGGATATGGTAAAGATGGTGCATATGGAGGAAAGTACTGGGAATATGACGGAGGAAAACACGAGGGATATGATGGTGGAAACTACTGGGGATACGACGGAAATAGACACGAAGGATACGATGGAGGTAACTATGGGAGATATGAAGGAGGTAAGCATGAGGAATACGACCGAGGTAAACACGAGGGATATGATGGAGGAAACTATGGAGGATACGGTGGAGGTAAGCATGAGGAATACAGCAGAAGTAAACATGAGGAATACGGCAGAGATAAATACGAGGGATACGGTGGAGTAAACTATGGAGGATACGGTGGAGGAAACTATGGAGGATACGGTGAAGGAAAGCATGAGGAATACGGTAGAGGATATTATGGAGGTAAGCATGAGGAATACGACGGAGGTAAACACGAGGAATACGGCAGAGATAAACACAAGGGATACGATGGAGGAAACTATGGAGGATACGGCGGAGGTAAGCATGAGGAATACAGTGGAGGAAACTACGGGGGATACGATGGAGGTAAGCACGAGGGATATGCACCCTGA
mRNA sequence
ATGTTCTTCGGAATAGGAATTTGTTCTGCAGCGAGACGTTTGTCAAGTTCTTATGGAGGATATGGTTCTTCAAGTGGTCATGGTTATAGTAGCTATGCTTCCGTAGGGGAATATGGTGTTGAAAATTATGGCAATGGATATGGTAAAGATGGTGCATATGGAGGAAAGTACTGGGAATATGACGGAGGAAAACACGAGGGATATGATGGTGGAAACTACTGGGGATACGACGGAAATAGACACGAAGGATACGATGGAGGTAACTATGGGAGATATGAAGGAGGTAAGCATGAGGAATACGACCGAGGTAAACACGAGGGATATGATGGAGGAAACTATGGAGGATACGGTGGAGGTAAGCATGAGGAATACAGCAGAAGTAAACATGAGGAATACGGCAGAGATAAATACGAGGGATACGGTGGAGTAAACTATGGAGGATACGGTGGAGGAAACTATGGAGGATACGGTGAAGGAAAGCATGAGGAATACGGTAGAGGATATTATGGAGGTAAGCATGAGGAATACGACGGAGGTAAACACGAGGAATACGGCAGAGATAAACACAAGGGATACGATGGAGGAAACTATGGAGGATACGGCGGAGGTAAGCATGAGGAATACAGTGGAGGAAACTACGGGGGATACGATGGAGGTAAGCACGAGGGATATGCACCCTGA
Coding sequence (CDS)
ATGTTCTTCGGAATAGGAATTTGTTCTGCAGCGAGACGTTTGTCAAGTTCTTATGGAGGATATGGTTCTTCAAGTGGTCATGGTTATAGTAGCTATGCTTCCGTAGGGGAATATGGTGTTGAAAATTATGGCAATGGATATGGTAAAGATGGTGCATATGGAGGAAAGTACTGGGAATATGACGGAGGAAAACACGAGGGATATGATGGTGGAAACTACTGGGGATACGACGGAAATAGACACGAAGGATACGATGGAGGTAACTATGGGAGATATGAAGGAGGTAAGCATGAGGAATACGACCGAGGTAAACACGAGGGATATGATGGAGGAAACTATGGAGGATACGGTGGAGGTAAGCATGAGGAATACAGCAGAAGTAAACATGAGGAATACGGCAGAGATAAATACGAGGGATACGGTGGAGTAAACTATGGAGGATACGGTGGAGGAAACTATGGAGGATACGGTGAAGGAAAGCATGAGGAATACGGTAGAGGATATTATGGAGGTAAGCATGAGGAATACGACGGAGGTAAACACGAGGAATACGGCAGAGATAAACACAAGGGATACGATGGAGGAAACTATGGAGGATACGGCGGAGGTAAGCATGAGGAATACAGTGGAGGAAACTACGGGGGATACGATGGAGGTAAGCACGAGGGATATGCACCCTGA
Protein sequence
MFFGIGICSAARRLSSSYGGYGSSSGHGYSSYASVGEYGVENYGNGYGKDGAYGGKYWEYDGGKHEGYDGGNYWGYDGNRHEGYDGGNYGRYEGGKHEEYDRGKHEGYDGGNYGGYGGGKHEEYSRSKHEEYGRDKYEGYGGVNYGGYGGGNYGGYGEGKHEEYGRGYYGGKHEEYDGGKHEEYGRDKHKGYDGGNYGGYGGGKHEEYSGGNYGGYDGGKHEGYAP
Homology
BLAST of Csor.00g069780 vs. NCBI nr
Match:
KAG6571662.1 (hypothetical protein SDJN03_28390, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 439 bits (1129), Expect = 3.78e-155
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0
Query: 1 MFFGIGICSAARRLSSSYGGYGSSSGHGYSSYASVGEYGVENYGNGYGKDGAYGGKYWEY 60
MFFGIGICSAARRLSSSYGGYGSSSGHGYSSYASVGEYGVENYGNGYGKDGAYGGKYWEY
Sbjct: 1 MFFGIGICSAARRLSSSYGGYGSSSGHGYSSYASVGEYGVENYGNGYGKDGAYGGKYWEY 60
Query: 61 DGGKHEGYDGGNYWGYDGNRHEGYDGGNYGRYEGGKHEEYDRGKHEGYDGGNYGGYGGGK 120
DGGKHEGYDGGNYWGYDGNRHEGYDGGNYGRYEGGKHEEYDRGKHEGYDGGNYGGYGGGK
Sbjct: 61 DGGKHEGYDGGNYWGYDGNRHEGYDGGNYGRYEGGKHEEYDRGKHEGYDGGNYGGYGGGK 120
Query: 121 HEEYSRSKHEEYGRDKYEGYGGVNYGGYGGGNYGGYGEGKHEEYGRGYYGGKHEEYDGGK 180
HEEYSRSKHEEYGRDKYEGYGGVNYGGYGGGNYGGYGEGKHEEYGRGYYGGKHEEYDGGK
Sbjct: 121 HEEYSRSKHEEYGRDKYEGYGGVNYGGYGGGNYGGYGEGKHEEYGRGYYGGKHEEYDGGK 180
Query: 181 HEEYGRDKHKGYDGGNYGGYGGGKHEEYSGGNYGGYDGGKHEGYAP 226
HEEYGRDKHKGYDGGNYGGYGGGKHEEYSGGNYGGYDGGKHEGYAP
Sbjct: 181 HEEYGRDKHKGYDGGNYGGYGGGKHEEYSGGNYGGYDGGKHEGYAP 226
BLAST of Csor.00g069780 vs. NCBI nr
Match:
XP_023554144.1 (keratin, type I cytoskeletal 9-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 308 bits (789), Expect = 9.59e-104
Identity = 174/226 (76.99%), Postives = 178/226 (78.76%), Query Frame = 0
Query: 1 MFFGIGICSAARRLSSSYGGYGSSSGHGYSSYASVGEYGVENYGNGYGKDGAYGGKYWEY 60
+FFGIGICSAARRLSSSYGGYGSSSGHGYSSYASVGEYGVENYG GYGKDGAYGGKYW Y
Sbjct: 15 LFFGIGICSAARRLSSSYGGYGSSSGHGYSSYASVGEYGVENYGYGYGKDGAYGGKYWGY 74
Query: 61 DGGKHEGYDGGNYWGYDGNRHEGYDGGNYGRYEGGKHEEYDRGKHEGYDGGNYGGYGGGK 120
DGGKHEGYDGGNYWGYDGNRH+GY YG YEGGKHEEYDRGKHEGYDGGNYGGYGGGK
Sbjct: 75 DGGKHEGYDGGNYWGYDGNRHDGY----YGGYEGGKHEEYDRGKHEGYDGGNYGGYGGGK 134
Query: 121 HEEYSRSKHEEYGRDKYEGYGGVNYGGYGGGNYGGYGEGKHEEYGRGYYGGKHEEYDGGK 180
HEEY R G YGGYG GGKHEEYDGGK
Sbjct: 135 HEEYGR------------------------GYYGGYG------------GGKHEEYDGGK 194
Query: 181 HEEYGRDKHKGYDGGNYGGYGGGKHEEYSGGNYGGYDGGKHEGYAP 226
HEEYG+DK+KGYDGGNYGGY GKHEEYSGGNYGGYDG KHEGYAP
Sbjct: 195 HEEYGKDKYKGYDGGNYGGYSEGKHEEYSGGNYGGYDGSKHEGYAP 200
BLAST of Csor.00g069780 vs. NCBI nr
Match:
XP_023554143.1 (keratin, type I cytoskeletal 9-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 300 bits (767), Expect = 2.86e-99
Identity = 185/262 (70.61%), Postives = 191/262 (72.90%), Query Frame = 0
Query: 1 MFFGIGICSAARRLSSSYGGYGSSSGHGYSSYASVGEYGVENYGNGYGKDGAYGGKYWEY 60
+FFGIGICSAARRLSSSY GYGSSSGHGYSSYASVGEYGVENYGNGYGKDGAYGGKY EY
Sbjct: 15 LFFGIGICSAARRLSSSYEGYGSSSGHGYSSYASVGEYGVENYGNGYGKDGAYGGKYGEY 74
Query: 61 --------DGGKHEGYDGGNYWGYDGNRHEGYDGGNYGRYEGGKHEEYDRGKHE------ 120
DGGKHEGYD GNY GY RHEGYDGGNYG Y GKHEEY RGKHE
Sbjct: 75 NGGKYGGYDGGKHEGYDSGNYGGYGRGRHEGYDGGNYGGYCRGKHEEYGRGKHEEYDRDK 134
Query: 121 ----------GYDGGNYGGYGGGKHEEYSRSKHEEYGRDKYEGYGGVNYGGYGGGNYGGY 180
GY GGNYGGYGGGKHEEY R KHEEY RDK+E Y G NYGGYGGG + Y
Sbjct: 135 HEGYSGGNYGGYGGGNYGGYGGGKHEEYDRHKHEEYDRDKHERYDGGNYGGYGGGKHEEY 194
Query: 181 GEGKHEEYGR----GYYGGKHEEYDGGKHEEYGRDKHKGYDGGNYGGYG--------GGK 226
G KHEEYGR GY G + Y GGKHEEY +DKH+GYD GNYGGYG G K
Sbjct: 195 GRDKHEEYGRDKHEGYDGENYGGYGGGKHEEYFKDKHEGYDRGNYGGYGRGKFEGYGGSK 254
BLAST of Csor.00g069780 vs. NCBI nr
Match:
KAG6571661.1 (Endo-1,4-beta-xylanase B, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 299 bits (766), Expect = 2.43e-94
Identity = 184/276 (66.67%), Postives = 194/276 (70.29%), Query Frame = 0
Query: 1 MFFGIGICSAARRLSSSYGGYGSSSGHGYSSYASVGEYGVENYGNGYGKDGAYGGKYWEY 60
MFFGIGICSAARRLSSSYGGYGSSSGHGYSSYASVGEYGVENYGNGYGKDGAYGGKY EY
Sbjct: 1 MFFGIGICSAARRLSSSYGGYGSSSGHGYSSYASVGEYGVENYGNGYGKDGAYGGKYGEY 60
Query: 61 --------DGGKHEGYDGGNYWGYDGNRHEGYDG------------------------GN 120
DGGKHE YD GNY GY G RHEGYDG GN
Sbjct: 61 NGGKYGRYDGGKHERYDSGNYGGYSGGRHEGYDGENYGGYGGGKHEEYGGGKHKGYDGGN 120
Query: 121 YGRYEGGKHEEYDRGKHEGYDGGNYGGYGGGKHEEYSRSKHEEYGRDKYEGYGGVNYGGY 180
YG Y GKHEEYD+ KHEGY+GGNYGGYGGGK+EEY R KHEEY +DKY GY G NYGGY
Sbjct: 121 YGGYSFGKHEEYDKDKHEGYNGGNYGGYGGGKYEEYDRGKHEEYDKDKYGGYDGGNYGGY 180
Query: 181 GGGNYGGYGEGKHEEYGRG------------YYGGKHEEYDGGKHEEYGRDKHKGYDGGN 224
GGG + Y GKHEEY +G Y GGKHEEY+ GKHEEY +DKH+GYDGGN
Sbjct: 181 GGGRHDEYDRGKHEEYDKGKHEGYDGGNYGGYDGGKHEEYNRGKHEEYDKDKHEGYDGGN 240
BLAST of Csor.00g069780 vs. NCBI nr
Match:
XP_022963737.1 (glycine-rich cell wall structural protein 1.8-like isoform X34 [Cucurbita moschata])
HSP 1 Score: 300 bits (768), Expect = 9.26e-93
Identity = 177/245 (72.24%), Postives = 186/245 (75.92%), Query Frame = 0
Query: 1 MFFGIGICSAARRLSSSYGGYGSSSGHGYSSYASVGEYGVENYGNGYGKDGAYGGKYWEY 60
+FFGIGICSAARRLSSSY GYGSSSGHGYSSYASVGEYGVENYGNGYGKDGAYGGKY EY
Sbjct: 15 LFFGIGICSAARRLSSSYEGYGSSSGHGYSSYASVGEYGVENYGNGYGKDGAYGGKYGEY 74
Query: 61 --------DGGKHEGYDGGNYWGYDGNRHEGYDGGNYGRYEGGKHEEYDRGKHEGYDGGN 120
DGGKHE YD GNY GY G RHEGYDG NYG Y GGKHEEY GKH+GYDGGN
Sbjct: 75 NGGKYGGYDGGKHERYDSGNYGGYSGGRHEGYDGENYGGYGGGKHEEYGGGKHKGYDGGN 134
Query: 121 YGGYGGGKHEEYSRSKHEEYGRDKYEGYGGVNYGGYGGGNYGGYGEGKHEEYGR----GY 180
YGGYG GKHEEY + KHE Y Y GYGG NYGGY GG YGGY GKHEEY + GY
Sbjct: 135 YGGYGFGKHEEYDKDKHEGYNGGNYGGYGGGNYGGYDGGKYGGYSRGKHEEYDKDKHEGY 194
Query: 181 YGGKHEEYDGGKHEEYGRDKHKGYDGGNYGGYGGGKHEEYS--------GGNYGGYDGGK 225
GG + Y GGKHEEY +DKH+GYDGG YGGYGG KHEEY GGNYGGY GG
Sbjct: 195 DGGNYGGYSGGKHEEYDKDKHEGYDGGKYGGYGGSKHEEYDKDKHEGYDGGNYGGYSGGN 254
BLAST of Csor.00g069780 vs. ExPASy TrEMBL
Match:
A0A6J1HG13 (glycine-rich cell wall structural protein 1.8-like isoform X34 OS=Cucurbita moschata OX=3662 GN=LOC111463951 PE=4 SV=1)
HSP 1 Score: 300 bits (768), Expect = 4.49e-93
Identity = 177/245 (72.24%), Postives = 186/245 (75.92%), Query Frame = 0
Query: 1 MFFGIGICSAARRLSSSYGGYGSSSGHGYSSYASVGEYGVENYGNGYGKDGAYGGKYWEY 60
+FFGIGICSAARRLSSSY GYGSSSGHGYSSYASVGEYGVENYGNGYGKDGAYGGKY EY
Sbjct: 15 LFFGIGICSAARRLSSSYEGYGSSSGHGYSSYASVGEYGVENYGNGYGKDGAYGGKYGEY 74
Query: 61 --------DGGKHEGYDGGNYWGYDGNRHEGYDGGNYGRYEGGKHEEYDRGKHEGYDGGN 120
DGGKHE YD GNY GY G RHEGYDG NYG Y GGKHEEY GKH+GYDGGN
Sbjct: 75 NGGKYGGYDGGKHERYDSGNYGGYSGGRHEGYDGENYGGYGGGKHEEYGGGKHKGYDGGN 134
Query: 121 YGGYGGGKHEEYSRSKHEEYGRDKYEGYGGVNYGGYGGGNYGGYGEGKHEEYGR----GY 180
YGGYG GKHEEY + KHE Y Y GYGG NYGGY GG YGGY GKHEEY + GY
Sbjct: 135 YGGYGFGKHEEYDKDKHEGYNGGNYGGYGGGNYGGYDGGKYGGYSRGKHEEYDKDKHEGY 194
Query: 181 YGGKHEEYDGGKHEEYGRDKHKGYDGGNYGGYGGGKHEEYS--------GGNYGGYDGGK 225
GG + Y GGKHEEY +DKH+GYDGG YGGYGG KHEEY GGNYGGY GG
Sbjct: 195 DGGNYGGYSGGKHEEYDKDKHEGYDGGKYGGYGGSKHEEYDKDKHEGYDGGNYGGYSGGN 254
BLAST of Csor.00g069780 vs. ExPASy TrEMBL
Match:
A0A6J1HL49 (glycine-rich cell wall structural protein 1.8-like isoform X50 OS=Cucurbita moschata OX=3662 GN=LOC111463951 PE=4 SV=1)
HSP 1 Score: 298 bits (764), Expect = 5.93e-93
Identity = 183/268 (68.28%), Postives = 191/268 (71.27%), Query Frame = 0
Query: 1 MFFGIGICSAARRLSSSYGGYGSSSGHGYSSYASVGEYGVENYGNGYGKDGAYGGKYWEY 60
+FFGIGICSAARRLSSSY GYGSSSGHGYSSYASVGEYGVENYGNGYGKDGAYGGKY EY
Sbjct: 15 LFFGIGICSAARRLSSSYEGYGSSSGHGYSSYASVGEYGVENYGNGYGKDGAYGGKYGEY 74
Query: 61 --------DGGKHEGYDGGNYWGYDGNRHEGYDG--------GNYGRYEGGKHEEYDRGK 120
DGGKHE YD GNY GY G RHEGYDG GNYG Y GGKHEEYD+ K
Sbjct: 75 NGGKYGGYDGGKHERYDSGNYGGYSGGRHEGYDGENYGGYGGGNYGGYGGGKHEEYDKDK 134
Query: 121 HEGYDGGNYGGYGGGKHEEYSR----------------SKHEEYGRDKYEGYGGVNYGGY 180
HEGYDGGNYGGY GGKHEEY + SKHEEY +DK+EGY G NYGGY
Sbjct: 135 HEGYDGGNYGGYSGGKHEEYDKDKHEGYDGGKYGGYGGSKHEEYDKDKHEGYDGGNYGGY 194
Query: 181 GGGNYGGYGEGKHEEYGR----GYYGGKHEEYDGGKHEEYGRDKHKGYDGGNYGGYGGGK 224
GGNYGGY KHEEY + GY GG + Y GGKHEEY +DKH GYDGG YGGY GGK
Sbjct: 195 SGGNYGGYSRSKHEEYDKDKHEGYDGGNYGGYSGGKHEEYNKDKHDGYDGGKYGGYSGGK 254
BLAST of Csor.00g069780 vs. ExPASy TrEMBL
Match:
A0A6J1HGU0 (uncharacterized PE-PGRS family protein PE_PGRS54-like isoform X10 OS=Cucurbita moschata OX=3662 GN=LOC111463951 PE=4 SV=1)
HSP 1 Score: 300 bits (768), Expect = 1.80e-92
Identity = 179/249 (71.89%), Postives = 188/249 (75.50%), Query Frame = 0
Query: 1 MFFGIGICSAARRLSSSYGGYGSSSGHGYSSYASVGEYGVENYGNGYGKDGAYGGKYWEY 60
+FFGIGICSAARRLSSSY GYGSSSGHGYSSYASVGEYGVENYGNGYGKDGAYGGKY EY
Sbjct: 15 LFFGIGICSAARRLSSSYEGYGSSSGHGYSSYASVGEYGVENYGNGYGKDGAYGGKYGEY 74
Query: 61 --------DGGKHEGYDGGNYWGYDGNRHEGYDGGNYGRYEGGKHEEYDRGKHEGYDGGN 120
DGGKHE YD GNY GY G RHEGYDG NYG Y GGKHEEY GKH+GYDGGN
Sbjct: 75 NGGKYGGYDGGKHERYDSGNYGGYSGGRHEGYDGENYGGYGGGKHEEYGGGKHKGYDGGN 134
Query: 121 YGGYGGGKHEEYSRSKHEEYGRDKYEGYGGVNYGGYGGGNYGGYGEGKHEEYGRGYYGGK 180
YGGYG GKHEEY + KHE Y Y GYGG Y Y GNYGG+G G+HEEY RG K
Sbjct: 135 YGGYGFGKHEEYDKDKHEGYNGGNYGGYGGGKYEEYDRGNYGGFGGGRHEEYDRG----K 194
Query: 181 HEEYDGGKHEEYGRDKHKGYDGGNY----------------GGYGGGKHEEYSGGNYGGY 225
HEEYD GKHEEY +DKH+GYD GNY GGYGGGKHEEYSGGNYGGY
Sbjct: 195 HEEYDKGKHEEYDKDKHEGYDRGNYRGYDGGKHEEYGRGNYGGYGGGKHEEYSGGNYGGY 254
BLAST of Csor.00g069780 vs. ExPASy TrEMBL
Match:
A0A6J1HIT5 (glycine-rich cell wall structural protein 1.8-like isoform X44 OS=Cucurbita moschata OX=3662 GN=LOC111463951 PE=4 SV=1)
HSP 1 Score: 297 bits (760), Expect = 2.70e-92
Identity = 181/276 (65.58%), Postives = 193/276 (69.93%), Query Frame = 0
Query: 1 MFFGIGICSAARRLSSSYGGYGSSSGHGYSSYASVGEYGVENYGNGYGKDGAYGGKYWEY 60
+FFGIGICSAARRLSSSY GYGSSSGHGYSSYASVGEYGVENYGNGYGKDGAYGGKY EY
Sbjct: 15 LFFGIGICSAARRLSSSYEGYGSSSGHGYSSYASVGEYGVENYGNGYGKDGAYGGKYGEY 74
Query: 61 DGGK------------------------HEGYDGGNYWGYDGNRHEGYDGGNYGRYEGGK 120
+GGK HEGYDG NY GY G++HEGY+GGNYG Y GGK
Sbjct: 75 NGGKYGGYDGGKHERYDSGNYGGYSGGRHEGYDGENYGGYGGDKHEGYNGGNYGGYGGGK 134
Query: 121 HEEYDRGKHEGYDGGNYGGYGGGKHEEYSR----------------SKHEEYGRDKYEGY 180
HEEYD+ KHEGYDGGNYGGY GGKHEEY + SKHEEY +DK+EGY
Sbjct: 135 HEEYDKDKHEGYDGGNYGGYSGGKHEEYDKDKHEGYDGGKYGGYGGSKHEEYDKDKHEGY 194
Query: 181 GGVNYGGYGGGNYGGYGEGKHEEYGR----GYYGGKHEEYDGGKHEEYGRDKHKGYDGGN 224
G NYGGY GGNYGGY KHEEY + GY GG + Y GGKHEEY +DKH GYDGG
Sbjct: 195 DGGNYGGYSGGNYGGYSRSKHEEYDKDKHEGYDGGNYGGYSGGKHEEYNKDKHDGYDGGK 254
BLAST of Csor.00g069780 vs. ExPASy TrEMBL
Match:
A0A6J1HG02 (uncharacterized PE-PGRS family protein PE_PGRS54-like isoform X20 OS=Cucurbita moschata OX=3662 GN=LOC111463951 PE=4 SV=1)
HSP 1 Score: 298 bits (764), Expect = 4.63e-92
Identity = 175/232 (75.43%), Postives = 182/232 (78.45%), Query Frame = 0
Query: 1 MFFGIGICSAARRLSSSYGGYGSSSGHGYSSYASVGEYGVENYGNGYGKDGAYGGKYWEY 60
+FFGIGICSAARRLSSSY GYGSSSGHGYSSYASVGEYGVENYGNGYGKDGAYGGKY EY
Sbjct: 15 LFFGIGICSAARRLSSSYEGYGSSSGHGYSSYASVGEYGVENYGNGYGKDGAYGGKYGEY 74
Query: 61 --------DGGKHEGYDGGNYWGYDGNRHEGYDGGNYGRYEGGKHEEYDRGKHEGYDGGN 120
DGGKHE YD GNY GY G RHEGYDG NYG Y GGKHEEY GKH+GYDGGN
Sbjct: 75 NGGKYGGYDGGKHERYDSGNYGGYSGGRHEGYDGENYGGYGGGKHEEYGGGKHKGYDGGN 134
Query: 121 YGGYGGGKHEEYSRSKHEEYGRDKYEGYGGVNYGGYGGGNYGGYGEGKHEEYGRGYYGGK 180
YGGYG GKHEEY + KHE Y Y GYGG Y Y GNYGG+G G+HEEY RG K
Sbjct: 135 YGGYGFGKHEEYDKDKHEGYNGGNYGGYGGGKYEEYDRGNYGGFGGGRHEEYDRG----K 194
Query: 181 HEEYDGGKHEEYGRDKHKGYDGGNYGGYGGGKHEEYSGGNYGGYDGGKHEGY 224
HEEYD GKHEEY +DKH+GYD GNY GY GGKHEEY GNYGGY GGKHE Y
Sbjct: 195 HEEYDKGKHEEYDKDKHEGYDRGNYRGYDGGKHEEYGRGNYGGYGGGKHEEY 242
BLAST of Csor.00g069780 vs. TAIR 10
Match:
AT3G07030.1 (Alba DNA/RNA-binding protein )
HSP 1 Score: 65.5 bits (158), Expect = 6.4e-11
Identity = 75/180 (41.67%), Postives = 94/180 (52.22%), Query Frame = 0
Query: 44 GNGYGKDGAYGGKYWEYDGGKHEGYDGGNYWGYDGNRHEGYDGGNYGRYEGGKHEEYDRG 103
G G G+DG YG GG+ +GY GY R++ Y GG Y GG+ + Y G
Sbjct: 218 GYGGGRDGGYG-------GGRDDGYGERRNDGYGERRNDRYGGGRDDGYGGGRDDGYGGG 277
Query: 104 KHEGYD---GGNYGGYGGGKHEEYSRSKHEEYGRDKYEGYGGVNYGGYGGGNYGGYGEGK 163
+++GY GG GG GGG+ E Y GR Y G G GYGGG GYG G+
Sbjct: 278 RNDGYGGRRGGFRGGRGGGRDEGYGG------GRGGYGGRSGGQGDGYGGGRGDGYGGGR 337
Query: 164 HEEYGRGYYGGKHEEYDGGKHEEYGRDKHKGYDGGNYGGYGGGKHEEYSGGNYGGYDGGK 221
G GY GG+ + Y GG+ + Y + GY GG Y GYGGGK + Y GG GGY GG+
Sbjct: 338 ----GDGYGGGRGDGYGGGRVDRYDGGRRDGYGGGRYDGYGGGKSDGYGGGR-GGYRGGR 379
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAG6571662.1 | 3.78e-155 | 100.00 | hypothetical protein SDJN03_28390, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_023554144.1 | 9.59e-104 | 76.99 | keratin, type I cytoskeletal 9-like [Cucurbita pepo subsp. pepo] | [more] |
| XP_023554143.1 | 2.86e-99 | 70.61 | keratin, type I cytoskeletal 9-like [Cucurbita pepo subsp. pepo] | [more] |
| KAG6571661.1 | 2.43e-94 | 66.67 | Endo-1,4-beta-xylanase B, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
| XP_022963737.1 | 9.26e-93 | 72.24 | glycine-rich cell wall structural protein 1.8-like isoform X34 [Cucurbita moscha... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1HG13 | 4.49e-93 | 72.24 | glycine-rich cell wall structural protein 1.8-like isoform X34 OS=Cucurbita mosc... | [more] |
| A0A6J1HL49 | 5.93e-93 | 68.28 | glycine-rich cell wall structural protein 1.8-like isoform X50 OS=Cucurbita mosc... | [more] |
| A0A6J1HGU0 | 1.80e-92 | 71.89 | uncharacterized PE-PGRS family protein PE_PGRS54-like isoform X10 OS=Cucurbita m... | [more] |
| A0A6J1HIT5 | 2.70e-92 | 65.58 | glycine-rich cell wall structural protein 1.8-like isoform X44 OS=Cucurbita mosc... | [more] |
| A0A6J1HG02 | 4.63e-92 | 75.43 | uncharacterized PE-PGRS family protein PE_PGRS54-like isoform X20 OS=Cucurbita m... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G07030.1 | 6.4e-11 | 41.67 | Alba DNA/RNA-binding protein | [more] |
