Csor.00g062210 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g062210
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr02: 4433089 .. 4433758 (-)
RNA-Seq ExpressionCsor.00g062210
SyntenyCsor.00g062210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACCTCTGGCTGTAGGCAAGTGCAAGACTGTGCCAGTGTGGCTTGCAAACAGGCAGGTGTTCAATCCAGCTTCTTTAGCGATGACGATTTATTCCAGCAGTCAGTGACGCATCGCAGAGACAGCGTTGCTCCCTGGCCAACGAGTGGAGAAACCGCAACAAACAAACTGGTCTTGGGTGGCAGCGACCTAAGGTTTGTTTTCTTCAGCCAGTTTATTTTGTCGTTCATGAGCTCTTGATTTGTGACCCACCTCTCCAAACAACCCAATTTGATTTTAACCTTAACATTATAGGTCTAGATCCACGATTCGAACCTTTTCGAACTACAACCAGCAAAAACTTAAGAGTTTTCTTGGTAAGAATTATTGGGTAATATGCATCACTAACCCTTTTCTAATTTGAATTAAGTACTCTAAATTAGTTTTAATTTATTGAAATTCTTTTTATGGGTTCTATTACACATGATCGGACTAAAACAAGAAATGCTTAAAGTTTAGACAACAAAAAATGGGAAACACATAAGTATTGATTTGAAAACATACCGTAACTCCAAGATTCTCTGAAATATATTGGCAGCATCAGCAAAATCACCTGCCCGAGCAAGAAGCCTCCCCTGTCAACTTGAAGCCAAAGTTTACTAATACAAATGAGCTCATTACTTTATGA

mRNA sequence

ATGGCAACCTCTGGCTGTAGGCAAGTGCAAGACTGTGCCAGTGTGGCTTGCAAACAGGCAGGTGTTCAATCCAGCTTCTTTAGCGATGACGATTTATTCCAGCAGTCAGTGACGCATCGCAGAGACAGCGTTGCTCCCTGGCCAACGAGTGGAGAAACCGCAACAAACAAACTGGTCTTGGGTGGCAGCGACCTAAGGTCTAGATCCACGATTCGAACCTTTTCGAACTACAACCAGCAAAAACTTAAGAGTTTTCTTGGTAAGAATTATTGGCATCAGCAAAATCACCTGCCCGAGCAAGAAGCCTCCCCTGTCAACTTGAAGCCAAAGTTTACTAATACAAATGAGCTCATTACTTTATGA

Coding sequence (CDS)

ATGGCAACCTCTGGCTGTAGGCAAGTGCAAGACTGTGCCAGTGTGGCTTGCAAACAGGCAGGTGTTCAATCCAGCTTCTTTAGCGATGACGATTTATTCCAGCAGTCAGTGACGCATCGCAGAGACAGCGTTGCTCCCTGGCCAACGAGTGGAGAAACCGCAACAAACAAACTGGTCTTGGGTGGCAGCGACCTAAGGTCTAGATCCACGATTCGAACCTTTTCGAACTACAACCAGCAAAAACTTAAGAGTTTTCTTGGTAAGAATTATTGGCATCAGCAAAATCACCTGCCCGAGCAAGAAGCCTCCCCTGTCAACTTGAAGCCAAAGTTTACTAATACAAATGAGCTCATTACTTTATGA

Protein sequence

MATSGCRQVQDCASVACKQAGVQSSFFSDDDLFQQSVTHRRDSVAPWPTSGETATNKLVLGGSDLRSRSTIRTFSNYNQQKLKSFLGKNYWHQQNHLPEQEASPVNLKPKFTNTNELITL
Homology
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BLAST of Csor.00g062210 vs. NCBI nr
Match: KAG6605392.1 (hypothetical protein SDJN03_02709, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 247 bits (631), Expect = 1.08e-82
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MATSGCRQVQDCASVACKQAGVQSSFFSDDDLFQQSVTHRRDSVAPWPTSGETATNKLVL 60
           MATSGCRQVQDCASVACKQAGVQSSFFSDDDLFQQSVTHRRDSVAPWPTSGETATNKLVL
Sbjct: 1   MATSGCRQVQDCASVACKQAGVQSSFFSDDDLFQQSVTHRRDSVAPWPTSGETATNKLVL 60

Query: 61  GGSDLRSRSTIRTFSNYNQQKLKSFLGKNYWHQQNHLPEQEASPVNLKPKFTNTNELITL 120
           GGSDLRSRSTIRTFSNYNQQKLKSFLGKNYWHQQNHLPEQEASPVNLKPKFTNTNELITL
Sbjct: 61  GGSDLRSRSTIRTFSNYNQQKLKSFLGKNYWHQQNHLPEQEASPVNLKPKFTNTNELITL 120

The following BLAST results are available for this feature:
BLAST of Csor.00g062210 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g062210 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6605392.11.08e-82100.00hypothetical protein SDJN03_02709, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g062210 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g062210 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g062210.m01Csor.00g062210.m01mRNA