Csor.00g061650 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGAGCCGACAGGCGGAACCAAACCGATCAAGTGCAGTGAGGACCAGAAACGTCAAAAATATGGAAGATATGCAGCAGGGTCCTCGTCCGACGAGCTTCTGATCGGGAATTCCGATGCTCCTCTACATTCAGAGACTGAAACTTCCCATATTTCCACAGGTGAAGATTCGGGAAGCTCCGGCGAGGAAACACGGTTGTCCGGCCTGGCAGAGAGCCTGCAGATCTTAACGAAGTCGCTGCTGACAGCGGAAATGGAGATTTTCAGGGCGAGGGAGGCCATCCGCCTTGAGGAGGAAAAGAGGAGGTTGGAATCGGAGGCCGAGATGACTCGCATGCTGCTCCAGTGTCAGATGCAGATCGCCTCGTTTCTGTCGGCCAGGCAGGGTCCCAACAACCGGAAAAGAAAGAGGGTTCAGGAAGAAGAACCATCTCCCTCAGTCTCCTTAGAAATGTAGAATAGAATCTTCAGCCTTCGTTAAGTAATCAGCAACAACTAATAACTGATATATGAATCTGATCTTGTTGATTGATGCAGGGACGGAGCTCTGCTGCTAAGTCTAATTCAACTCAACATGATCACCTTTTGA ATGGAAGAGCCGACAGGCGGAACCAAACCGATCAAGTGCAGTGAGGACCAGAAACGTCAAAAATATGGAAGATATGCAGCAGGGTCCTCGTCCGACGAGCTTCTGATCGGGAATTCCGATGCTCCTCTACATTCAGAGACTGAAACTTCCCATATTTCCACAGGTGAAGATTCGGGAAGCTCCGGCGAGGAAACACGGTTGTCCGGCCTGGCAGAGAGCCTGCAGATCTTAACGAAGTCGCTGCTGACAGCGGAAATGGAGATTTTCAGGGCGAGGGAGGCCATCCGCCTTGAGGAGGAAAAGAGGAGGTTGGAATCGGAGGCCGAGATGACTCGCATGCTGCTCCAGTGTCAGATGCAGATCGCCTCGTTTCTGTCGGCCAGGCAGGGTCCCAACAACCGGAAAAGAAAGAGGGTTCAGGAAGAAGAACCATCTCCCTCAGTCTCCTTAGAAATGGACGGAGCTCTGCTGCTAAGTCTAATTCAACTCAACATGATCACCTTTTGA ATGGAAGAGCCGACAGGCGGAACCAAACCGATCAAGTGCAGTGAGGACCAGAAACGTCAAAAATATGGAAGATATGCAGCAGGGTCCTCGTCCGACGAGCTTCTGATCGGGAATTCCGATGCTCCTCTACATTCAGAGACTGAAACTTCCCATATTTCCACAGGTGAAGATTCGGGAAGCTCCGGCGAGGAAACACGGTTGTCCGGCCTGGCAGAGAGCCTGCAGATCTTAACGAAGTCGCTGCTGACAGCGGAAATGGAGATTTTCAGGGCGAGGGAGGCCATCCGCCTTGAGGAGGAAAAGAGGAGGTTGGAATCGGAGGCCGAGATGACTCGCATGCTGCTCCAGTGTCAGATGCAGATCGCCTCGTTTCTGTCGGCCAGGCAGGGTCCCAACAACCGGAAAAGAAAGAGGGTTCAGGAAGAAGAACCATCTCCCTCAGTCTCCTTAGAAATGGACGGAGCTCTGCTGCTAAGTCTAATTCAACTCAACATGATCACCTTTTGA MEEPTGGTKPIKCSEDQKRQKYGRYAAGSSSDELLIGNSDAPLHSETETSHISTGEDSGSSGEETRLSGLAESLQILTKSLLTAEMEIFRAREAIRLEEEKRRLESEAEMTRMLLQCQMQIASFLSARQGPNNRKRKRVQEEEPSPSVSLEMDGALLLSLIQLNMITF Homology
BLAST of Csor.00g061650 vs. ExPASy Swiss-Prot
Match: Q8L8L9 (Uncharacterized protein At4g22160 OS=Arabidopsis thaliana OX=3702 GN=At4g22160 PE=2 SV=2) HSP 1 Score: 75.9 bits (185), Expect = 5.0e-13 Identity = 63/156 (40.38%), Postives = 93/156 (59.62%), Query Frame = 0
BLAST of Csor.00g061650 vs. NCBI nr
Match: KAG6603799.1 (hypothetical protein SDJN03_04408, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 311 bits (797), Expect = 1.90e-106 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of Csor.00g061650 vs. NCBI nr
Match: XP_022949954.1 (uncharacterized protein At4g22160 [Cucurbita moschata]) HSP 1 Score: 303 bits (777), Expect = 2.13e-103 Identity = 165/168 (98.21%), Postives = 165/168 (98.21%), Query Frame = 0
BLAST of Csor.00g061650 vs. NCBI nr
Match: XP_023544081.1 (uncharacterized protein LOC111803775 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 301 bits (772), Expect = 1.23e-102 Identity = 163/168 (97.02%), Postives = 164/168 (97.62%), Query Frame = 0
BLAST of Csor.00g061650 vs. NCBI nr
Match: XP_022977691.1 (uncharacterized protein LOC111477923 [Cucurbita maxima]) HSP 1 Score: 301 bits (771), Expect = 6.07e-102 Identity = 163/168 (97.02%), Postives = 164/168 (97.62%), Query Frame = 0
BLAST of Csor.00g061650 vs. NCBI nr
Match: XP_038882486.1 (uncharacterized protein LOC120073739 [Benincasa hispida]) HSP 1 Score: 256 bits (654), Expect = 1.18e-84 Identity = 141/168 (83.93%), Postives = 150/168 (89.29%), Query Frame = 0
BLAST of Csor.00g061650 vs. ExPASy TrEMBL
Match: A0A6J1GEE5 (uncharacterized protein At4g22160 OS=Cucurbita moschata OX=3662 GN=LOC111453191 PE=4 SV=1) HSP 1 Score: 303 bits (777), Expect = 1.03e-103 Identity = 165/168 (98.21%), Postives = 165/168 (98.21%), Query Frame = 0
BLAST of Csor.00g061650 vs. ExPASy TrEMBL
Match: A0A6J1IKP0 (uncharacterized protein LOC111477923 OS=Cucurbita maxima OX=3661 GN=LOC111477923 PE=4 SV=1) HSP 1 Score: 301 bits (771), Expect = 2.94e-102 Identity = 163/168 (97.02%), Postives = 164/168 (97.62%), Query Frame = 0
BLAST of Csor.00g061650 vs. ExPASy TrEMBL
Match: A0A0A0KHR9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G512930 PE=4 SV=1) HSP 1 Score: 246 bits (629), Expect = 3.55e-81 Identity = 137/168 (81.55%), Postives = 148/168 (88.10%), Query Frame = 0
BLAST of Csor.00g061650 vs. ExPASy TrEMBL
Match: A0A5D3CRX4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006190 PE=4 SV=1) HSP 1 Score: 240 bits (613), Expect = 1.00e-78 Identity = 134/168 (79.76%), Postives = 144/168 (85.71%), Query Frame = 0
BLAST of Csor.00g061650 vs. ExPASy TrEMBL
Match: A0A1S3AZS4 (uncharacterized protein LOC103484640 OS=Cucumis melo OX=3656 GN=LOC103484640 PE=4 SV=1) HSP 1 Score: 233 bits (594), Expect = 7.85e-76 Identity = 131/168 (77.98%), Postives = 141/168 (83.93%), Query Frame = 0
BLAST of Csor.00g061650 vs. TAIR 10
Match: AT4G22160.2 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 75.9 bits (185), Expect = 3.5e-14 Identity = 63/156 (40.38%), Postives = 93/156 (59.62%), Query Frame = 0
BLAST of Csor.00g061650 vs. TAIR 10
Match: AT4G22160.1 (unknown protein; Has 42 Blast hits to 42 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 71.2 bits (173), Expect = 8.7e-13 Identity = 55/133 (41.35%), Postives = 81/133 (60.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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