Csor.00g060690 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g060690
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Csor_Chr03: 6058722 .. 6060512 (+)
RNA-Seq Expression	Csor.00g060690
Synteny	Csor.00g060690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAGAATTTACTCCCGACAACTCTTTCGCTTCACACGCGCCTCCCTCCCTCCGCCCTCTAAATACATTGATCGATGTCCGTCTCCATTTTGCTCTTTTGCAGAACCAGATCTTTCACTCGACGCCAGAAATCCTCCTAGACATAACCGATGCCATTCGCTTCTTCAATCATGTCAGAGCATGAGAGAATTAGTTCAAATCCATGGCCATTTGATTACCTCTGGTCTTTTCAATCACCATTTTTGGGCCAACCGAGTTCTATTGCAGGCATCGGAGTTTGGGGACATCGTTTATACTGTTTTGATCTTTAAGCTTATAAAGGTTCCCAATGCCTTCTGCATCAATAGAGTAATTAAGGCCTATTCTCTTAGCTCAGATCCTCTAGAGGCTGTATTTGTGTATTTTCAATGGCTTGGTGCTGGGTTTCGGCCTGATACGTACACTTTTCTTTCGCTTTTTTGCGCTTGTGCGAGTTTTGGCTGTGGGTCTTCTGGGCGGAAGTGTCATGGACAGGCTTTCAAGAATGGGGTTGACTGTGTGATGGTTTTGAGAAATAGTTTGATTCATATGTATGGCTGTTGTGGTCATATTGAGCTTGGCCGGAAGGTGTTCGACGAAATGTCGACCCTGGATCTGGTGTCTTGGAATTCGATTGTTACAGCTTATGCAAGAGTTGGGGATTTGCAGACTGCCCATGACATGTTTGATGCAATGCCTGAGAGAAATGTTGTTTCTTGGAATTTGATGATTAGTGAGTATTTGAGAGGTGGGAGTCCTGGCTGTGCAATGAAGTTGTTTAGGAATATGATGAAGATAGGAATAAGAGGGAACAGTACAACAATGGTAAACATTCTTGGTGCTTGTGGTCGATCGGCCAGGCTGAATGAAGGAAGATCGGTTCATGGTTTTATGTACCGTACTTCGATGAAGTTCTGTGTATTTATCGACACGGCATTGGTTGACATGTATGGCAAATGCCAGAGAGTATCTGTTGCACGTAGACTATTTGACAGGATGGTGAATCGGAATTTGGTTACCTGGAATGCGATGGTTTTGGGGCATTGCCTACATGGGAATCCTGAAGATGGACTTAAGCTATTTGAGGAAATGGCTGCTAAATTAAGGGAAAGAAATGGGGAAGCAGGCAGTGGCAAGAAATTCAAGCAAGATGAAGGTGAGAGAAAAGTCTTCCTGGACCAAATTACGTTTATTGGCGTTCTTTGTGCCTGTGCTCGGGCGGGACTGCTGGAAGATGCAAATAACTACTTTGATGAGATGATCAATGTATTCCTTGTGAGGCCAAATTTTGCACACTACTGGTGTTTGGCCAATGTTTACGTTGCAGCAGGGTTGATTCAGCAGGCTGTGGAAATCCTTAGAAACATGCCTGAGGATATTGAGGACTTTTCATCAGAATTGGTTGTATGGACCAACTTGCTTGCGACATGTCGTTTCGGGGGAGATGTTTCTTTGGGAGAACAGATTGCAAACTATTTGATTGACATGGAGCCTAAGAATGAGTCATACTATAGATTGCTTCTGAATATTTATGCTGTAGCAGGGAGATGGGAGGATGTTTCTAGAATCAAAGTATTAATGAAAGAAAAACGACTCGGAACATTTCCGGGTTGTAGACTGGTAGACCTGAAAGAGATTGTTCACAGATTAAAATTGGGAAATCTTCTGCAAGAGGGGATGAAGGAGACAAACACAGTGATGCATAAACTTGCTAGTGAAGTGAGTCTATTGTCAACTATTGCTGCAGGGCAATCGGATCTTAGAGTTTAG

mRNA sequence

ATGGCAAGAATTTACTCCCGACAACTCTTTCGCTTCACACGCGCCTCCCTCCCTCCGCCCTCTAAATACATTGATCGATGTCCGTCTCCATTTTGCTCTTTTGCAGAACCAGATCTTTCACTCGACGCCAGAAATCCTCCTAGACATAACCGATGCCATTCGCTTCTTCAATCATGTCAGAGCATGAGAGAATTAGTTCAAATCCATGGCCATTTGATTACCTCTGGTCTTTTCAATCACCATTTTTGGGCCAACCGAGTTCTATTGCAGGCATCGGAGTTTGGGGACATCGTTTATACTGTTTTGATCTTTAAGCTTATAAAGGTTCCCAATGCCTTCTGCATCAATAGAGTAATTAAGGCCTATTCTCTTAGCTCAGATCCTCTAGAGGCTGTATTTGTGTATTTTCAATGGCTTGGTGCTGGGTTTCGGCCTGATACGTACACTTTTCTTTCGCTTTTTTGCGCTTGTGCGAGTTTTGGCTGTGGGTCTTCTGGGCGGAAGTGTCATGGACAGGCTTTCAAGAATGGGGTTGACTGTGTGATGGTTTTGAGAAATAGTTTGATTCATATGTATGGCTGTTGTGGTCATATTGAGCTTGGCCGGAAGGTGTTCGACGAAATGTCGACCCTGGATCTGGTGTCTTGGAATTCGATTGTTACAGCTTATGCAAGAGTTGGGGATTTGCAGACTGCCCATGACATGTTTGATGCAATGCCTGAGAGAAATGTTGTTTCTTGGAATTTGATGATTAGTGAGTATTTGAGAGGTGGGAGTCCTGGCTGTGCAATGAAGTTGTTTAGGAATATGATGAAGATAGGAATAAGAGGGAACAGTACAACAATGGTAAACATTCTTGGTGCTTGTGGTCGATCGGCCAGGCTGAATGAAGGAAGATCGGTTCATGGTTTTATGTACCGTACTTCGATGAAGTTCTGTGTATTTATCGACACGGCATTGGTTGACATGTATGGCAAATGCCAGAGAGTATCTGTTGCACGTAGACTATTTGACAGGATGGTGAATCGGAATTTGGTTACCTGGAATGCGATGGTTTTGGGGCATTGCCTACATGGGAATCCTGAAGATGGACTTAAGCTATTTGAGGAAATGGCTGCTAAATTAAGGGAAAGAAATGGGGAAGCAGGCAGTGGCAAGAAATTCAAGCAAGATGAAGGTGAGAGAAAAGTCTTCCTGGACCAAATTACGTTTATTGGCGTTCTTTGTGCCTGTGCTCGGGCGGGACTGCTGGAAGATGCAAATAACTACTTTGATGAGATGATCAATGTATTCCTTGTGAGGCCAAATTTTGCACACTACTGGTGTTTGGCCAATGTTTACGTTGCAGCAGGGTTGATTCAGCAGGCTGTGGAAATCCTTAGAAACATGCCTGAGGATATTGAGGACTTTTCATCAGAATTGGTTGTATGGACCAACTTGCTTGCGACATGTCGTTTCGGGGGAGATGTTTCTTTGGGAGAACAGATTGCAAACTATTTGATTGACATGGAGCCTAAGAATGAGTCATACTATAGATTGCTTCTGAATATTTATGCTGTAGCAGGGAGATGGGAGGATGTTTCTAGAATCAAAGTATTAATGAAAGAAAAACGACTCGGAACATTTCCGGGTTGTAGACTGGTAGACCTGAAAGAGATTGTTCACAGATTAAAATTGGGAAATCTTCTGCAAGAGGGGATGAAGGAGACAAACACAGTGATGCATAAACTTGCTAGTGAAGTGAGTCTATTGTCAACTATTGCTGCAGGGCAATCGGATCTTAGAGTTTAG

Coding sequence (CDS)

ATGGCAAGAATTTACTCCCGACAACTCTTTCGCTTCACACGCGCCTCCCTCCCTCCGCCCTCTAAATACATTGATCGATGTCCGTCTCCATTTTGCTCTTTTGCAGAACCAGATCTTTCACTCGACGCCAGAAATCCTCCTAGACATAACCGATGCCATTCGCTTCTTCAATCATGTCAGAGCATGAGAGAATTAGTTCAAATCCATGGCCATTTGATTACCTCTGGTCTTTTCAATCACCATTTTTGGGCCAACCGAGTTCTATTGCAGGCATCGGAGTTTGGGGACATCGTTTATACTGTTTTGATCTTTAAGCTTATAAAGGTTCCCAATGCCTTCTGCATCAATAGAGTAATTAAGGCCTATTCTCTTAGCTCAGATCCTCTAGAGGCTGTATTTGTGTATTTTCAATGGCTTGGTGCTGGGTTTCGGCCTGATACGTACACTTTTCTTTCGCTTTTTTGCGCTTGTGCGAGTTTTGGCTGTGGGTCTTCTGGGCGGAAGTGTCATGGACAGGCTTTCAAGAATGGGGTTGACTGTGTGATGGTTTTGAGAAATAGTTTGATTCATATGTATGGCTGTTGTGGTCATATTGAGCTTGGCCGGAAGGTGTTCGACGAAATGTCGACCCTGGATCTGGTGTCTTGGAATTCGATTGTTACAGCTTATGCAAGAGTTGGGGATTTGCAGACTGCCCATGACATGTTTGATGCAATGCCTGAGAGAAATGTTGTTTCTTGGAATTTGATGATTAGTGAGTATTTGAGAGGTGGGAGTCCTGGCTGTGCAATGAAGTTGTTTAGGAATATGATGAAGATAGGAATAAGAGGGAACAGTACAACAATGGTAAACATTCTTGGTGCTTGTGGTCGATCGGCCAGGCTGAATGAAGGAAGATCGGTTCATGGTTTTATGTACCGTACTTCGATGAAGTTCTGTGTATTTATCGACACGGCATTGGTTGACATGTATGGCAAATGCCAGAGAGTATCTGTTGCACGTAGACTATTTGACAGGATGGTGAATCGGAATTTGGTTACCTGGAATGCGATGGTTTTGGGGCATTGCCTACATGGGAATCCTGAAGATGGACTTAAGCTATTTGAGGAAATGGCTGCTAAATTAAGGGAAAGAAATGGGGAAGCAGGCAGTGGCAAGAAATTCAAGCAAGATGAAGGTGAGAGAAAAGTCTTCCTGGACCAAATTACGTTTATTGGCGTTCTTTGTGCCTGTGCTCGGGCGGGACTGCTGGAAGATGCAAATAACTACTTTGATGAGATGATCAATGTATTCCTTGTGAGGCCAAATTTTGCACACTACTGGTGTTTGGCCAATGTTTACGTTGCAGCAGGGTTGATTCAGCAGGCTGTGGAAATCCTTAGAAACATGCCTGAGGATATTGAGGACTTTTCATCAGAATTGGTTGTATGGACCAACTTGCTTGCGACATGTCGTTTCGGGGGAGATGTTTCTTTGGGAGAACAGATTGCAAACTATTTGATTGACATGGAGCCTAAGAATGAGTCATACTATAGATTGCTTCTGAATATTTATGCTGTAGCAGGGAGATGGGAGGATGTTTCTAGAATCAAAGTATTAATGAAAGAAAAACGACTCGGAACATTTCCGGGTTGTAGACTGGTAGACCTGAAAGAGATTGTTCACAGATTAAAATTGGGAAATCTTCTGCAAGAGGGGATGAAGGAGACAAACACAGTGATGCATAAACTTGCTAGTGAAGTGAGTCTATTGTCAACTATTGCTGCAGGGCAATCGGATCTTAGAGTTTAG

Protein sequence

MARIYSRQLFRFTRASLPPPSKYIDRCPSPFCSFAEPDLSLDARNPPRHNRCHSLLQSCQSMRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLIKVPNAFCINRVIKAYSLSSDPLEAVFVYFQWLGAGFRPDTYTFLSLFCACASFGCGSSGRKCHGQAFKNGVDCVMVLRNSLIHMYGCCGHIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLQTAHDMFDAMPERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNEGRSVHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLGHCLHGNPEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCACARAGLLEDANNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSELVVWTNLLATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLGTFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMHKLASEVSLLSTIAAGQSDLRV

Homology

[Close]

BLAST of Csor.00g060690 vs. ExPASy Swiss-Prot
Match: Q0WVU0 (Pentatricopeptide repeat-containing protein At3g51320 OS=Arabidopsis thaliana OX=3702 GN=At3g51320 PE=2 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 4.6e-146
Identity = 248/506 (49.01%), Postives = 338/506 (66.80%), Query Frame = 0


Query: 55  LLQSCQSMRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLIKVPNAFC 114
           L++   S+  L Q+H  LITSG F    WA R+L  +S FGD  YTV I++   +   +C
Sbjct: 28  LVEDSNSITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYR--SIGKLYC 87

Query: 115 INRVIKAYSLSSDPLEAVFVYFQWLGAGFRPDTYTFLSLFCACASFGCGSSGRKCHGQAF 174
            N V KAY +SS P +A+  YF  L  GF PD+YTF+SL        C  SG+ CHGQA 
Sbjct: 88  ANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAI 147

Query: 175 KNGVDCVMVLRNSLIHMYGCCGHIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLQTAHD 234
           K+G D V+ ++NSL+HMY CCG ++L +K+F E+   D+VSWNSI+    R GD+  AH 
Sbjct: 148 KHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHK 207

Query: 235 MFDAMPERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSAR 294
           +FD MP++N++SWN+MIS YL   +PG ++ LFR M++ G +GN +T+V +L ACGRSAR
Sbjct: 208 LFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSAR 267

Query: 295 LNEGRSVHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLG 354
           L EGRSVH  + RT +   V IDTAL+DMYGKC+ V +ARR+FD +  RN VTWN M+L 
Sbjct: 268 LKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILA 327

Query: 355 HCLHGNPEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCACARA 414
           HCLHG PE GL+LFE M       NG                +  D++TF+GVLC CARA
Sbjct: 328 HCLHGRPEGGLELFEAMI------NG---------------MLRPDEVTFVGVLCGCARA 387

Query: 415 GLLEDANNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSEL 474
           GL+    +Y+  M++ F ++PNF H WC+AN+Y +AG  ++A E L+N+P+  ED + E 
Sbjct: 388 GLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPD--EDVTPES 447

Query: 475 VVWTNLLATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLM 534
             W NLL++ RF G+ +LGE IA  LI+ +P N  YY LL+NIY+V GRWEDV+R++ ++
Sbjct: 448 TKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMV 507

Query: 535 KEKRLGTFPGCRLVDLKEIVHRLKLG 561
           KE+++G  PGC LVDLKEIVH L+LG
Sbjct: 508 KERKIGRIPGCGLVDLKEIVHGLRLG 508

[Close]

BLAST of Csor.00g060690 vs. ExPASy Swiss-Prot
Match: Q9CA54 (Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H71 PE=2 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.0e-81
Identity = 176/576 (30.56%), Postives = 291/576 (50.52%), Query Frame = 0


Query: 50  NRCHSLLQSCQSMRELVQIHGHLITSGLFNHHFWANRVLLQ-ASEFGD-IVYTVLIFKLI 109
           + C SLL SC+++R L QIHG  I  G+    ++  +++L  A    D + Y   +    
Sbjct: 6   HHCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCF 65

Query: 110 KVPNAFCINRVIKAYSLSSDPLEAVFVYFQWLGAGF-RPDTYTFLSLFCACASFGCGSSG 169
             P+AF  N +++ YS S +P  +V V+ + +  GF  PD+++F  +  A  +F    +G
Sbjct: 66  PEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTG 125

Query: 170 RKCHGQAFKNGVDCVMVLRNSLIHMYGCCGHIELGRKVFDEMSTLDLVSWNSIVTAYARV 229
            + H QA K+G++  + +  +LI MYG CG +E  RKVFDEM   +LV+WN+++TA  R 
Sbjct: 126 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRG 185

Query: 230 GDLQTAHDMFDAMPERNVVSWNLMISEYLRGGSPGCAMKL-------------------- 289
            D+  A ++FD M  RN  SWN+M++ Y++ G    A ++                    
Sbjct: 186 NDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIA 245

Query: 290 -----------FRNMMKIGIRGNSTTMVNILGACGRSARLNEGRSVHGFMYRTSMKFCVF 349
                      FR + + G+  N  ++  +L AC +S     G+ +HGF+ +    + V 
Sbjct: 246 HNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVS 305

Query: 350 IDTALVDMYGKCQRVSVARRLFDRM-VNRNLVTWNAMVLGHCLHGNPEDGLKLFEEMAAK 409
           ++ AL+DMY +C  V +AR +F+ M   R +V+W +M+ G  +HG  E+ ++LF EM A 
Sbjct: 306 VNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTA- 365

Query: 410 LRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCACARAGLLEDANNYFDEMINVFLVR 469
                                 V  D I+FI +L AC+ AGL+E+  +YF EM  V+ + 
Sbjct: 366 --------------------YGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIE 425

Query: 470 PNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSELVVWTNLLATCRFGGDVSLGE 529
           P   HY C+ ++Y  +G +Q+A + +  MP          +VW  LL  C   G++ L E
Sbjct: 426 PEIEHYGCMVDLYGRSGKLQKAYDFICQMP-----IPPTAIVWRTLLGACSSHGNIELAE 485

Query: 530 QIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLGTFPGCRLVDLKEIV 589
           Q+   L +++P N     LL N YA AG+W+DV+ I+  M  +R+       LV++ + +
Sbjct: 486 QVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTM 545

Query: 590 HRLKLGNLLQEGMKETNTVMHKLASEVSLLSTIAAG 591
           ++   G    E  K  +   H+   E+ L     AG
Sbjct: 546 YKFTAG----EKKKGIDIEAHEKLKEIILRLKDEAG 551

[Close]

BLAST of Csor.00g060690 vs. ExPASy Swiss-Prot
Match: Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.1e-78
Identity = 163/525 (31.05%), Postives = 272/525 (51.81%), Query Frame = 0


Query: 56  LQSCQSMRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLIKVPNAFCI 115
           LQ  +S  E  +I+  +I  GL    F   +++    +  D+ Y   +F  +  PN F  
Sbjct: 17  LQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLY 76

Query: 116 NRVIKAYSLSSDPLEAVFVYFQWLGAGFR-PDTYTFLSLFCACASFGCGSSGRKCHGQAF 175
           N +I+AY+ +S   + + +Y Q L   F  PD +TF  +F +CAS G    G++ HG   
Sbjct: 77  NSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLC 136

Query: 176 KNGVDCVMVLRNSLIHMYGCCGHIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLQTAHD 235
           K G    +V  N+LI MY     +    KVFDEM   D++SWNS+++ YAR+G ++ A  
Sbjct: 137 KFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKG 196

Query: 236 MFDAMPERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSAR 295
           +F  M ++ +VSW  MIS Y   G    AM  FR M   GI  +  +++++L +C +   
Sbjct: 197 LFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGS 256

Query: 296 LNEGRSVHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLG 355
           L  G+ +H +  R        +  AL++MY KC  +S A +LF +M  +++++W+ M+ G
Sbjct: 257 LELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISG 316

Query: 356 HCLHGNPEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCACARA 415
           +  HGN    ++ F EM     + NG                     ITF+G+L AC+  
Sbjct: 317 YAYHGNAHGAIETFNEMQRAKVKPNG---------------------ITFLGLLSACSHV 376

Query: 416 GLLEDANNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSEL 475
           G+ ++   YFD M   + + P   HY CL +V   AG +++AVEI + MP        + 
Sbjct: 377 GMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMP-----MKPDS 436

Query: 476 VVWTNLLATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLM 535
            +W +LL++CR  G++ +     ++L+++EP++   Y LL NIYA  G+WEDVSR++ ++
Sbjct: 437 KIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMI 496

Query: 536 KEKRLGTFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMHKLAS 580
           + + +   PG  L+++  IV     G+  +    E + V+    S
Sbjct: 497 RNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQLFTS 515

[Close]

BLAST of Csor.00g060690 vs. ExPASy Swiss-Prot
Match: Q9SJG6 (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E75 PE=2 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 4.1e-78
Identity = 164/500 (32.80%), Postives = 267/500 (53.40%), Query Frame = 0


Query: 59  CQSMRELVQIHGHLITSGLFNHHFWANRVL-LQASEFGDIVYTVLIFKLIKVPNAFCINR 118
           C +MREL QIH  LI +GL +    A+RVL    +   D+ Y  L+F  I   N F  N 
Sbjct: 35  CSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNT 94

Query: 119 VIKAYSLSSDPLEAVFVYFQWL--GAGFRPDTYTFLSLFCACASFGCGSSGRKCHGQAFK 178
           +I+ +S SS P  A+ ++   L      +P   T+ S+F A    G    GR+ HG   K
Sbjct: 95  IIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIK 154

Query: 179 NGVDCVMVLRNSLIHMYGCCGHIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLQTAHDM 238
            G++    +RN+++HMY  CG +    ++F  M   D+V+WNS++  +A+ G +  A ++
Sbjct: 155 EGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNL 214

Query: 239 FDAMPERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARL 298
           FD MP+RN VSWN MIS ++R G    A+ +FR M +  ++ +  TMV++L AC      
Sbjct: 215 FDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGAS 274

Query: 299 NEGRSVHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLGH 358
            +GR +H ++ R   +    + TAL+DMY KC  +     +F+    + L  WN+M+LG 
Sbjct: 275 EQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGL 334

Query: 359 CLHGNPEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCACARAG 418
             +G  E  + LF E+     ER+G                +  D ++FIGVL ACA +G
Sbjct: 335 ANNGFEERAMDLFSEL-----ERSG----------------LEPDSVSFIGVLTACAHSG 394

Query: 419 LLEDANNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSELV 478
            +  A+ +F  M   +++ P+  HY  + NV   AGL+++A  +++NMP +      + V
Sbjct: 395 EVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVE-----EDTV 454

Query: 479 VWTNLLATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMK 538
           +W++LL+ CR  G+V + ++ A  L  ++P     Y LL N YA  G +E+    ++LMK
Sbjct: 455 IWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMK 508

Query: 539 EKRLGTFPGCRLVDLKEIVH 556
           E+++    GC  +++   VH
Sbjct: 515 ERQMEKEVGCSSIEVDFEVH 508

[Close]

BLAST of Csor.00g060690 vs. ExPASy Swiss-Prot
Match: Q9SZT8 (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELI1 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 7.0e-78
Identity = 168/531 (31.64%), Postives = 281/531 (52.92%), Query Frame = 0


Query: 55  LLQSCQSMRELVQIHGHLITSGLFNHHFW--ANRVLLQA-SEFGDIVYTVLIFKLIKVPN 114
           L+   QS+ E++QIH  ++   L  H  +   N  L +A +  G I +++ +F     P+
Sbjct: 35  LIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPD 94

Query: 115 AFCINRVIKAYSLSSDPLEAVFVYFQWLGAGFRPDTYTFLSLFCACASFGCGSSGRKCHG 174
            F     I   S++    +A  +Y Q L +   P+ +TF SL  +C++     SG+  H 
Sbjct: 95  LFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KSGKLIHT 154

Query: 175 QAFKNGVDCVMVLRNSLIHMYGCCGHIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLQT 234
              K G+     +   L+ +Y   G +   +KVFD M    LVS  +++T YA+ G+++ 
Sbjct: 155 HVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEA 214

Query: 235 AHDMFDAMPERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIG-IRGNSTTMVNILGACG 294
           A  +FD+M ER++VSWN+MI  Y + G P  A+ LF+ ++  G  + +  T+V  L AC 
Sbjct: 215 ARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACS 274

Query: 295 RSARLNEGRSVHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNA 354
           +   L  GR +H F+  + ++  V + T L+DMY KC  +  A  +F+    +++V WNA
Sbjct: 275 QIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNA 334

Query: 355 MVLGHCLHGNPEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCA 414
           M+ G+ +HG  +D L+LF EM                    +G   +    ITFIG L A
Sbjct: 335 MIAGYAMHGYSQDALRLFNEM--------------------QGITGLQPTDITFIGTLQA 394

Query: 415 CARAGLLEDANNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDF 474
           CA AGL+ +    F+ M   + ++P   HY CL ++   AG +++A E ++NM  D    
Sbjct: 395 CAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMD---- 454

Query: 475 SSELVVWTNLLATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRI 534
            ++ V+W+++L +C+  GD  LG++IA YLI +  KN   Y LL NIYA  G +E V+++
Sbjct: 455 -ADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKV 514

Query: 535 KVLMKEKRLGTFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMHKLASEV 582
           + LMKEK +   PG   ++++  VH  + G+      KE  T++ K++  +
Sbjct: 515 RNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERI 536

[Close]

BLAST of Csor.00g060690 vs. NCBI nr
Match: KAG6603895.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1222 bits (3162), Expect = 0.0
Identity = 596/596 (100.00%), Postives = 596/596 (100.00%), Query Frame = 0


Query: 1   MARIYSRQLFRFTRASLPPPSKYIDRCPSPFCSFAEPDLSLDARNPPRHNRCHSLLQSCQ 60
           MARIYSRQLFRFTRASLPPPSKYIDRCPSPFCSFAEPDLSLDARNPPRHNRCHSLLQSCQ
Sbjct: 1   MARIYSRQLFRFTRASLPPPSKYIDRCPSPFCSFAEPDLSLDARNPPRHNRCHSLLQSCQ 60

Query: 61  SMRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLIKVPNAFCINRVIK 120
           SMRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLIKVPNAFCINRVIK
Sbjct: 61  SMRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLIKVPNAFCINRVIK 120

Query: 121 AYSLSSDPLEAVFVYFQWLGAGFRPDTYTFLSLFCACASFGCGSSGRKCHGQAFKNGVDC 180
           AYSLSSDPLEAVFVYFQWLGAGFRPDTYTFLSLFCACASFGCGSSGRKCHGQAFKNGVDC
Sbjct: 121 AYSLSSDPLEAVFVYFQWLGAGFRPDTYTFLSLFCACASFGCGSSGRKCHGQAFKNGVDC 180

Query: 181 VMVLRNSLIHMYGCCGHIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLQTAHDMFDAMP 240
           VMVLRNSLIHMYGCCGHIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLQTAHDMFDAMP
Sbjct: 181 VMVLRNSLIHMYGCCGHIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLQTAHDMFDAMP 240

Query: 241 ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNEGRS 300
           ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNEGRS
Sbjct: 241 ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNEGRS 300

Query: 301 VHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLGHCLHGN 360
           VHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLGHCLHGN
Sbjct: 301 VHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLGHCLHGN 360

Query: 361 PEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCACARAGLLEDA 420
           PEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCACARAGLLEDA
Sbjct: 361 PEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCACARAGLLEDA 420

Query: 421 NNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSELVVWTNL 480
           NNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSELVVWTNL
Sbjct: 421 NNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSELVVWTNL 480

Query: 481 LATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG 540
           LATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG
Sbjct: 481 LATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG 540

Query: 541 TFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMHKLASEVSLLSTIAAGQSDLRV 596
           TFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMHKLASEVSLLSTIAAGQSDLRV
Sbjct: 541 TFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMHKLASEVSLLSTIAAGQSDLRV 596

[Close]

BLAST of Csor.00g060690 vs. NCBI nr
Match: XP_022950690.1 (pentatricopeptide repeat-containing protein At3g51320 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1211 bits (3134), Expect = 0.0
Identity = 591/596 (99.16%), Postives = 591/596 (99.16%), Query Frame = 0


Query: 1   MARIYSRQLFRFTRASLPPPSKYIDRCPSPFCSFAEPDLSLDARNPPRHNRCHSLLQSCQ 60
           MARIYSRQLFRFTRASLPPPSKYIDRCPSPFCSFAEPDLSLDARNPPRHNRCHSLLQSCQ
Sbjct: 1   MARIYSRQLFRFTRASLPPPSKYIDRCPSPFCSFAEPDLSLDARNPPRHNRCHSLLQSCQ 60

Query: 61  SMRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLIKVPNAFCINRVIK 120
           SMRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLI VPNAFCINRVIK
Sbjct: 61  SMRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLINVPNAFCINRVIK 120

Query: 121 AYSLSSDPLEAVFVYFQWLGAGFRPDTYTFLSLFCACASFGCGSSGRKCHGQAFKNGVDC 180
           AYSLSSDPLEAVFVYFQWLG GFRPDTYTFLSLFCACAS GCGSSGRKCHGQAFKNGVDC
Sbjct: 121 AYSLSSDPLEAVFVYFQWLGDGFRPDTYTFLSLFCACASIGCGSSGRKCHGQAFKNGVDC 180

Query: 181 VMVLRNSLIHMYGCCGHIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLQTAHDMFDAMP 240
           VMVLRNSLIHMYGCCGHIELGRKVFDEM TLDLVSWNSIVTAYARVGDL TAHDMFDAMP
Sbjct: 181 VMVLRNSLIHMYGCCGHIELGRKVFDEMLTLDLVSWNSIVTAYARVGDLHTAHDMFDAMP 240

Query: 241 ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNEGRS 300
           ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNEGRS
Sbjct: 241 ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNEGRS 300

Query: 301 VHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLGHCLHGN 360
           VHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLGHCLHGN
Sbjct: 301 VHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLGHCLHGN 360

Query: 361 PEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCACARAGLLEDA 420
           PEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCACARAGLLEDA
Sbjct: 361 PEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCACARAGLLEDA 420

Query: 421 NNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSELVVWTNL 480
           NNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSELVVWTNL
Sbjct: 421 NNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSELVVWTNL 480

Query: 481 LATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG 540
           LATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG
Sbjct: 481 LATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG 540

Query: 541 TFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMHKLASEVSLLSTIAAGQSDLRV 596
           TFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMHKLASEVSLLSTIAAGQSDLRV
Sbjct: 541 TFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMHKLASEVSLLSTIAAGQSDLRV 596

[Close]

BLAST of Csor.00g060690 vs. NCBI nr
Match: XP_023544620.1 (pentatricopeptide repeat-containing protein At3g51320 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1193 bits (3086), Expect = 0.0
Identity = 583/596 (97.82%), Postives = 586/596 (98.32%), Query Frame = 0


Query: 1   MARIYSRQLFRFTRASLPPPSKYIDRCPSPFCSFAEPDLSLDARNPPRHNRCHSLLQSCQ 60
           MARIYSRQLFRFTRASLPPPSK IDRC SPFCSFAEPDLSLD RNPPRHNRCHSLLQSCQ
Sbjct: 1   MARIYSRQLFRFTRASLPPPSKSIDRCSSPFCSFAEPDLSLDTRNPPRHNRCHSLLQSCQ 60

Query: 61  SMRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLIKVPNAFCINRVIK 120
           SMRELVQIHG+LITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLI VPNAFCINRVIK
Sbjct: 61  SMRELVQIHGYLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLINVPNAFCINRVIK 120

Query: 121 AYSLSSDPLEAVFVYFQWLGAGFRPDTYTFLSLFCACASFGCGSSGRKCHGQAFKNGVDC 180
           AYSLSS PLEAVFVYFQWLG GFRPDTYTFLSLFCACAS GCGSSGRKCHGQAFKNGVDC
Sbjct: 121 AYSLSSVPLEAVFVYFQWLGDGFRPDTYTFLSLFCACASIGCGSSGRKCHGQAFKNGVDC 180

Query: 181 VMVLRNSLIHMYGCCGHIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLQTAHDMFDAMP 240
           VMVLRNSLIHMY CCGHIELGRKVFDEMSTLDLVSWNSIVTAYARVGDL TAHDMFDAMP
Sbjct: 181 VMVLRNSLIHMYACCGHIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLHTAHDMFDAMP 240

Query: 241 ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNEGRS 300
           ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNEGRS
Sbjct: 241 ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNEGRS 300

Query: 301 VHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLGHCLHGN 360
           VHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLGHCLHGN
Sbjct: 301 VHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLGHCLHGN 360

Query: 361 PEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCACARAGLLEDA 420
           PEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVF DQITFIGVLCACARAGLLEDA
Sbjct: 361 PEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFPDQITFIGVLCACARAGLLEDA 420

Query: 421 NNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSELVVWTNL 480
           NNYFDEMIN+FLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSELVVWTNL
Sbjct: 421 NNYFDEMINIFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSELVVWTNL 480

Query: 481 LATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG 540
           LATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG
Sbjct: 481 LATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG 540

Query: 541 TFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMHKLASEVSLLSTIAAGQSDLRV 596
           TFPGCRLVDLKEIVHRLKLGNLLQEGMKETN+VMHKLASEVSLLSTIAAGQSDLRV
Sbjct: 541 TFPGCRLVDLKEIVHRLKLGNLLQEGMKETNSVMHKLASEVSLLSTIAAGQSDLRV 596

[Close]

BLAST of Csor.00g060690 vs. NCBI nr
Match: XP_022978359.1 (pentatricopeptide repeat-containing protein At3g51320 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1161 bits (3004), Expect = 0.0
Identity = 571/596 (95.81%), Postives = 576/596 (96.64%), Query Frame = 0


Query: 1   MARIYSRQLFRFTRASLPPPSKYIDRCPSPFCSFAEPDLSLDARNPPRHNRCHSLLQSCQ 60
           MARIYSRQLFRFTRASLPPPSK IDRC SPFCSFAEPDLSLD  NPPRHNRCHSLLQSCQ
Sbjct: 1   MARIYSRQLFRFTRASLPPPSKSIDRCSSPFCSFAEPDLSLDTINPPRHNRCHSLLQSCQ 60

Query: 61  SMRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLIKVPNAFCINRVIK 120
           S+RELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLI VPNAFCINRVIK
Sbjct: 61  SIRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLINVPNAFCINRVIK 120

Query: 121 AYSLSSDPLEAVFVYFQWLGAGFRPDTYTFLSLFCACASFGCGSSGRKCHGQAFKNGVDC 180
           AYSLSSDPLEAVFVYFQWLG GFRPDTYTFLSLFCACAS GCGSSGRKCHGQAFKNGVDC
Sbjct: 121 AYSLSSDPLEAVFVYFQWLGDGFRPDTYTFLSLFCACASIGCGSSGRKCHGQAFKNGVDC 180

Query: 181 VMVLRNSLIHMYGCCGHIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLQTAHDMFDAMP 240
           VMVLRNSLIHMYGCCG+IELGRKVFDEMSTLDLVSWNSIVTAYARVGDL TAHDMFDAMP
Sbjct: 181 VMVLRNSLIHMYGCCGYIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLHTAHDMFDAMP 240

Query: 241 ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNEGRS 300
           ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSA LNEGRS
Sbjct: 241 ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSASLNEGRS 300

Query: 301 VHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLGHCLHGN 360
           VHGFMYRTS KFCVFI TALVDMYGKCQRV +ARRLFDRM NRNLVTWNAMVLGHCLHGN
Sbjct: 301 VHGFMYRTSTKFCVFIGTALVDMYGKCQRVCIARRLFDRMPNRNLVTWNAMVLGHCLHGN 360

Query: 361 PEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCACARAGLLEDA 420
           PEDGLKL+EEMAAKLRERNGEAGSGKKFKQDEGERKVF DQITFIGVLCACARAGLLEDA
Sbjct: 361 PEDGLKLYEEMAAKLRERNGEAGSGKKFKQDEGERKVFPDQITFIGVLCACARAGLLEDA 420

Query: 421 NNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSELVVWTNL 480
           NNYFDEMINVFLV+PNFAHYWCLANVYVAAGLIQQAVEILRNM EDIEDFSSELVVWTNL
Sbjct: 421 NNYFDEMINVFLVKPNFAHYWCLANVYVAAGLIQQAVEILRNMTEDIEDFSSELVVWTNL 480

Query: 481 LATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG 540
           LATCRF GDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG
Sbjct: 481 LATCRFRGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG 540

Query: 541 TFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMHKLASEVSLLSTIAAGQSDLRV 596
           TFPGCRLVDLKEIVHRLKLGNLLQE    TNTVMHKLASEVSLLSTIAAGQSDLRV
Sbjct: 541 TFPGCRLVDLKEIVHRLKLGNLLQE----TNTVMHKLASEVSLLSTIAAGQSDLRV 592

[Close]

BLAST of Csor.00g060690 vs. NCBI nr
Match: XP_022950691.1 (pentatricopeptide repeat-containing protein At3g51320 isoform X2 [Cucurbita moschata])

HSP 1 Score: 1140 bits (2948), Expect = 0.0
Identity = 556/561 (99.11%), Postives = 556/561 (99.11%), Query Frame = 0


Query: 36  EPDLSLDARNPPRHNRCHSLLQSCQSMRELVQIHGHLITSGLFNHHFWANRVLLQASEFG 95
           EPDLSLDARNPPRHNRCHSLLQSCQSMRELVQIHGHLITSGLFNHHFWANRVLLQASEFG
Sbjct: 3   EPDLSLDARNPPRHNRCHSLLQSCQSMRELVQIHGHLITSGLFNHHFWANRVLLQASEFG 62

Query: 96  DIVYTVLIFKLIKVPNAFCINRVIKAYSLSSDPLEAVFVYFQWLGAGFRPDTYTFLSLFC 155
           DIVYTVLIFKLI VPNAFCINRVIKAYSLSSDPLEAVFVYFQWLG GFRPDTYTFLSLFC
Sbjct: 63  DIVYTVLIFKLINVPNAFCINRVIKAYSLSSDPLEAVFVYFQWLGDGFRPDTYTFLSLFC 122

Query: 156 ACASFGCGSSGRKCHGQAFKNGVDCVMVLRNSLIHMYGCCGHIELGRKVFDEMSTLDLVS 215
           ACAS GCGSSGRKCHGQAFKNGVDCVMVLRNSLIHMYGCCGHIELGRKVFDEM TLDLVS
Sbjct: 123 ACASIGCGSSGRKCHGQAFKNGVDCVMVLRNSLIHMYGCCGHIELGRKVFDEMLTLDLVS 182

Query: 216 WNSIVTAYARVGDLQTAHDMFDAMPERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGI 275
           WNSIVTAYARVGDL TAHDMFDAMPERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGI
Sbjct: 183 WNSIVTAYARVGDLHTAHDMFDAMPERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGI 242

Query: 276 RGNSTTMVNILGACGRSARLNEGRSVHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARR 335
           RGNSTTMVNILGACGRSARLNEGRSVHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARR
Sbjct: 243 RGNSTTMVNILGACGRSARLNEGRSVHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARR 302

Query: 336 LFDRMVNRNLVTWNAMVLGHCLHGNPEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGER 395
           LFDRMVNRNLVTWNAMVLGHCLHGNPEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGER
Sbjct: 303 LFDRMVNRNLVTWNAMVLGHCLHGNPEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGER 362

Query: 396 KVFLDQITFIGVLCACARAGLLEDANNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQ 455
           KVFLDQITFIGVLCACARAGLLEDANNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQ
Sbjct: 363 KVFLDQITFIGVLCACARAGLLEDANNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQ 422

Query: 456 AVEILRNMPEDIEDFSSELVVWTNLLATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLL 515
           AVEILRNMPEDIEDFSSELVVWTNLLATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLL
Sbjct: 423 AVEILRNMPEDIEDFSSELVVWTNLLATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLL 482

Query: 516 NIYAVAGRWEDVSRIKVLMKEKRLGTFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMH 575
           NIYAVAGRWEDVSRIKVLMKEKRLGTFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMH
Sbjct: 483 NIYAVAGRWEDVSRIKVLMKEKRLGTFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMH 542

Query: 576 KLASEVSLLSTIAAGQSDLRV 596
           KLASEVSLLSTIAAGQSDLRV
Sbjct: 543 KLASEVSLLSTIAAGQSDLRV 563

[Close]

BLAST of Csor.00g060690 vs. ExPASy TrEMBL
Match: A0A6J1GGG4 (pentatricopeptide repeat-containing protein At3g51320 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453712 PE=4 SV=1)

HSP 1 Score: 1211 bits (3134), Expect = 0.0
Identity = 591/596 (99.16%), Postives = 591/596 (99.16%), Query Frame = 0


Query: 1   MARIYSRQLFRFTRASLPPPSKYIDRCPSPFCSFAEPDLSLDARNPPRHNRCHSLLQSCQ 60
           MARIYSRQLFRFTRASLPPPSKYIDRCPSPFCSFAEPDLSLDARNPPRHNRCHSLLQSCQ
Sbjct: 1   MARIYSRQLFRFTRASLPPPSKYIDRCPSPFCSFAEPDLSLDARNPPRHNRCHSLLQSCQ 60

Query: 61  SMRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLIKVPNAFCINRVIK 120
           SMRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLI VPNAFCINRVIK
Sbjct: 61  SMRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLINVPNAFCINRVIK 120

Query: 121 AYSLSSDPLEAVFVYFQWLGAGFRPDTYTFLSLFCACASFGCGSSGRKCHGQAFKNGVDC 180
           AYSLSSDPLEAVFVYFQWLG GFRPDTYTFLSLFCACAS GCGSSGRKCHGQAFKNGVDC
Sbjct: 121 AYSLSSDPLEAVFVYFQWLGDGFRPDTYTFLSLFCACASIGCGSSGRKCHGQAFKNGVDC 180

Query: 181 VMVLRNSLIHMYGCCGHIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLQTAHDMFDAMP 240
           VMVLRNSLIHMYGCCGHIELGRKVFDEM TLDLVSWNSIVTAYARVGDL TAHDMFDAMP
Sbjct: 181 VMVLRNSLIHMYGCCGHIELGRKVFDEMLTLDLVSWNSIVTAYARVGDLHTAHDMFDAMP 240

Query: 241 ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNEGRS 300
           ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNEGRS
Sbjct: 241 ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNEGRS 300

Query: 301 VHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLGHCLHGN 360
           VHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLGHCLHGN
Sbjct: 301 VHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLGHCLHGN 360

Query: 361 PEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCACARAGLLEDA 420
           PEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCACARAGLLEDA
Sbjct: 361 PEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCACARAGLLEDA 420

Query: 421 NNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSELVVWTNL 480
           NNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSELVVWTNL
Sbjct: 421 NNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSELVVWTNL 480

Query: 481 LATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG 540
           LATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG
Sbjct: 481 LATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG 540

Query: 541 TFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMHKLASEVSLLSTIAAGQSDLRV 596
           TFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMHKLASEVSLLSTIAAGQSDLRV
Sbjct: 541 TFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMHKLASEVSLLSTIAAGQSDLRV 596

[Close]

BLAST of Csor.00g060690 vs. ExPASy TrEMBL
Match: A0A6J1ITV7 (pentatricopeptide repeat-containing protein At3g51320 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478374 PE=4 SV=1)

HSP 1 Score: 1161 bits (3004), Expect = 0.0
Identity = 571/596 (95.81%), Postives = 576/596 (96.64%), Query Frame = 0


Query: 1   MARIYSRQLFRFTRASLPPPSKYIDRCPSPFCSFAEPDLSLDARNPPRHNRCHSLLQSCQ 60
           MARIYSRQLFRFTRASLPPPSK IDRC SPFCSFAEPDLSLD  NPPRHNRCHSLLQSCQ
Sbjct: 1   MARIYSRQLFRFTRASLPPPSKSIDRCSSPFCSFAEPDLSLDTINPPRHNRCHSLLQSCQ 60

Query: 61  SMRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLIKVPNAFCINRVIK 120
           S+RELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLI VPNAFCINRVIK
Sbjct: 61  SIRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLINVPNAFCINRVIK 120

Query: 121 AYSLSSDPLEAVFVYFQWLGAGFRPDTYTFLSLFCACASFGCGSSGRKCHGQAFKNGVDC 180
           AYSLSSDPLEAVFVYFQWLG GFRPDTYTFLSLFCACAS GCGSSGRKCHGQAFKNGVDC
Sbjct: 121 AYSLSSDPLEAVFVYFQWLGDGFRPDTYTFLSLFCACASIGCGSSGRKCHGQAFKNGVDC 180

Query: 181 VMVLRNSLIHMYGCCGHIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLQTAHDMFDAMP 240
           VMVLRNSLIHMYGCCG+IELGRKVFDEMSTLDLVSWNSIVTAYARVGDL TAHDMFDAMP
Sbjct: 181 VMVLRNSLIHMYGCCGYIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLHTAHDMFDAMP 240

Query: 241 ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNEGRS 300
           ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSA LNEGRS
Sbjct: 241 ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSASLNEGRS 300

Query: 301 VHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLGHCLHGN 360
           VHGFMYRTS KFCVFI TALVDMYGKCQRV +ARRLFDRM NRNLVTWNAMVLGHCLHGN
Sbjct: 301 VHGFMYRTSTKFCVFIGTALVDMYGKCQRVCIARRLFDRMPNRNLVTWNAMVLGHCLHGN 360

Query: 361 PEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCACARAGLLEDA 420
           PEDGLKL+EEMAAKLRERNGEAGSGKKFKQDEGERKVF DQITFIGVLCACARAGLLEDA
Sbjct: 361 PEDGLKLYEEMAAKLRERNGEAGSGKKFKQDEGERKVFPDQITFIGVLCACARAGLLEDA 420

Query: 421 NNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSELVVWTNL 480
           NNYFDEMINVFLV+PNFAHYWCLANVYVAAGLIQQAVEILRNM EDIEDFSSELVVWTNL
Sbjct: 421 NNYFDEMINVFLVKPNFAHYWCLANVYVAAGLIQQAVEILRNMTEDIEDFSSELVVWTNL 480

Query: 481 LATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG 540
           LATCRF GDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG
Sbjct: 481 LATCRFRGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG 540

Query: 541 TFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMHKLASEVSLLSTIAAGQSDLRV 596
           TFPGCRLVDLKEIVHRLKLGNLLQE    TNTVMHKLASEVSLLSTIAAGQSDLRV
Sbjct: 541 TFPGCRLVDLKEIVHRLKLGNLLQE----TNTVMHKLASEVSLLSTIAAGQSDLRV 592

[Close]

BLAST of Csor.00g060690 vs. ExPASy TrEMBL
Match: A0A6J1GFI6 (pentatricopeptide repeat-containing protein At3g51320 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453712 PE=4 SV=1)

HSP 1 Score: 1140 bits (2948), Expect = 0.0
Identity = 556/561 (99.11%), Postives = 556/561 (99.11%), Query Frame = 0


Query: 36  EPDLSLDARNPPRHNRCHSLLQSCQSMRELVQIHGHLITSGLFNHHFWANRVLLQASEFG 95
           EPDLSLDARNPPRHNRCHSLLQSCQSMRELVQIHGHLITSGLFNHHFWANRVLLQASEFG
Sbjct: 3   EPDLSLDARNPPRHNRCHSLLQSCQSMRELVQIHGHLITSGLFNHHFWANRVLLQASEFG 62

Query: 96  DIVYTVLIFKLIKVPNAFCINRVIKAYSLSSDPLEAVFVYFQWLGAGFRPDTYTFLSLFC 155
           DIVYTVLIFKLI VPNAFCINRVIKAYSLSSDPLEAVFVYFQWLG GFRPDTYTFLSLFC
Sbjct: 63  DIVYTVLIFKLINVPNAFCINRVIKAYSLSSDPLEAVFVYFQWLGDGFRPDTYTFLSLFC 122

Query: 156 ACASFGCGSSGRKCHGQAFKNGVDCVMVLRNSLIHMYGCCGHIELGRKVFDEMSTLDLVS 215
           ACAS GCGSSGRKCHGQAFKNGVDCVMVLRNSLIHMYGCCGHIELGRKVFDEM TLDLVS
Sbjct: 123 ACASIGCGSSGRKCHGQAFKNGVDCVMVLRNSLIHMYGCCGHIELGRKVFDEMLTLDLVS 182

Query: 216 WNSIVTAYARVGDLQTAHDMFDAMPERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGI 275
           WNSIVTAYARVGDL TAHDMFDAMPERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGI
Sbjct: 183 WNSIVTAYARVGDLHTAHDMFDAMPERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGI 242

Query: 276 RGNSTTMVNILGACGRSARLNEGRSVHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARR 335
           RGNSTTMVNILGACGRSARLNEGRSVHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARR
Sbjct: 243 RGNSTTMVNILGACGRSARLNEGRSVHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARR 302

Query: 336 LFDRMVNRNLVTWNAMVLGHCLHGNPEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGER 395
           LFDRMVNRNLVTWNAMVLGHCLHGNPEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGER
Sbjct: 303 LFDRMVNRNLVTWNAMVLGHCLHGNPEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGER 362

Query: 396 KVFLDQITFIGVLCACARAGLLEDANNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQ 455
           KVFLDQITFIGVLCACARAGLLEDANNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQ
Sbjct: 363 KVFLDQITFIGVLCACARAGLLEDANNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQ 422

Query: 456 AVEILRNMPEDIEDFSSELVVWTNLLATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLL 515
           AVEILRNMPEDIEDFSSELVVWTNLLATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLL
Sbjct: 423 AVEILRNMPEDIEDFSSELVVWTNLLATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLL 482

Query: 516 NIYAVAGRWEDVSRIKVLMKEKRLGTFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMH 575
           NIYAVAGRWEDVSRIKVLMKEKRLGTFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMH
Sbjct: 483 NIYAVAGRWEDVSRIKVLMKEKRLGTFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMH 542

Query: 576 KLASEVSLLSTIAAGQSDLRV 596
           KLASEVSLLSTIAAGQSDLRV
Sbjct: 543 KLASEVSLLSTIAAGQSDLRV 563

[Close]

BLAST of Csor.00g060690 vs. ExPASy TrEMBL
Match: A0A6J1IPV8 (pentatricopeptide repeat-containing protein At3g51320 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478374 PE=4 SV=1)

HSP 1 Score: 1096 bits (2835), Expect = 0.0
Identity = 538/561 (95.90%), Postives = 543/561 (96.79%), Query Frame = 0


Query: 36  EPDLSLDARNPPRHNRCHSLLQSCQSMRELVQIHGHLITSGLFNHHFWANRVLLQASEFG 95
           EPDLSLD  NPPRHNRCHSLLQSCQS+RELVQIHGHLITSGLFNHHFWANRVLLQASEFG
Sbjct: 3   EPDLSLDTINPPRHNRCHSLLQSCQSIRELVQIHGHLITSGLFNHHFWANRVLLQASEFG 62

Query: 96  DIVYTVLIFKLIKVPNAFCINRVIKAYSLSSDPLEAVFVYFQWLGAGFRPDTYTFLSLFC 155
           DIVYTVLIFKLI VPNAFCINRVIKAYSLSSDPLEAVFVYFQWLG GFRPDTYTFLSLFC
Sbjct: 63  DIVYTVLIFKLINVPNAFCINRVIKAYSLSSDPLEAVFVYFQWLGDGFRPDTYTFLSLFC 122

Query: 156 ACASFGCGSSGRKCHGQAFKNGVDCVMVLRNSLIHMYGCCGHIELGRKVFDEMSTLDLVS 215
           ACAS GCGSSGRKCHGQAFKNGVDCVMVLRNSLIHMYGCCG+IELGRKVFDEMSTLDLVS
Sbjct: 123 ACASIGCGSSGRKCHGQAFKNGVDCVMVLRNSLIHMYGCCGYIELGRKVFDEMSTLDLVS 182

Query: 216 WNSIVTAYARVGDLQTAHDMFDAMPERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGI 275
           WNSIVTAYARVGDL TAHDMFDAMPERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGI
Sbjct: 183 WNSIVTAYARVGDLHTAHDMFDAMPERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGI 242

Query: 276 RGNSTTMVNILGACGRSARLNEGRSVHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARR 335
           RGNSTTMVNILGACGRSA LNEGRSVHGFMYRTS KFCVFI TALVDMYGKCQRV +ARR
Sbjct: 243 RGNSTTMVNILGACGRSASLNEGRSVHGFMYRTSTKFCVFIGTALVDMYGKCQRVCIARR 302

Query: 336 LFDRMVNRNLVTWNAMVLGHCLHGNPEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGER 395
           LFDRM NRNLVTWNAMVLGHCLHGNPEDGLKL+EEMAAKLRERNGEAGSGKKFKQDEGER
Sbjct: 303 LFDRMPNRNLVTWNAMVLGHCLHGNPEDGLKLYEEMAAKLRERNGEAGSGKKFKQDEGER 362

Query: 396 KVFLDQITFIGVLCACARAGLLEDANNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQ 455
           KVF DQITFIGVLCACARAGLLEDANNYFDEMINVFLV+PNFAHYWCLANVYVAAGLIQQ
Sbjct: 363 KVFPDQITFIGVLCACARAGLLEDANNYFDEMINVFLVKPNFAHYWCLANVYVAAGLIQQ 422

Query: 456 AVEILRNMPEDIEDFSSELVVWTNLLATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLL 515
           AVEILRNM EDIEDFSSELVVWTNLLATCRF GDVSLGEQIANYLIDMEPKNESYYRLLL
Sbjct: 423 AVEILRNMTEDIEDFSSELVVWTNLLATCRFRGDVSLGEQIANYLIDMEPKNESYYRLLL 482

Query: 516 NIYAVAGRWEDVSRIKVLMKEKRLGTFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMH 575
           NIYAVAGRWEDVSRIKVLMKEKRLGTFPGCRLVDLKEIVHRLKLGNLLQE    TNTVMH
Sbjct: 483 NIYAVAGRWEDVSRIKVLMKEKRLGTFPGCRLVDLKEIVHRLKLGNLLQE----TNTVMH 542

Query: 576 KLASEVSLLSTIAAGQSDLRV 596
           KLASEVSLLSTIAAGQSDLRV
Sbjct: 543 KLASEVSLLSTIAAGQSDLRV 559

[Close]

BLAST of Csor.00g060690 vs. ExPASy TrEMBL
Match: A0A6J1BTT2 (pentatricopeptide repeat-containing protein At3g51320 OS=Momordica charantia OX=3673 GN=LOC111005621 PE=4 SV=1)

HSP 1 Score: 1021 bits (2640), Expect = 0.0
Identity = 494/596 (82.89%), Postives = 535/596 (89.77%), Query Frame = 0


Query: 1   MARIYSRQLFRFTRASLPPPSKYIDRCPSPFCSFAEPDLSLDARNPPRHNRCHSLLQSCQ 60
           MARI +RQL  F  A+L  P K I R  SPFCSF EPDL     NPPRHNR  SLLQSCQ
Sbjct: 1   MARISTRQLLHFRHATLSLPYKSISRSSSPFCSFPEPDL-----NPPRHNRSFSLLQSCQ 60

Query: 61  SMRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLIKVPNAFCINRVIK 120
           S+REL+QIHGHLITSGLFNHHFWANRVLLQASEFGDIVYT+LIF+ IK+PN FCINRV+K
Sbjct: 61  SIRELLQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTILIFRRIKIPNTFCINRVLK 120

Query: 121 AYSLSSDPLEAVFVYFQWLGAGFRPDTYTFLSLFCACASFGCGSSGRKCHGQAFKNGVDC 180
           AYSLS+ P EAVF+YF+WLG GFRPDTYTFLSLFCACAS GCG+SGRKCHGQAFKNGVDC
Sbjct: 121 AYSLSTVPQEAVFLYFEWLGNGFRPDTYTFLSLFCACASVGCGASGRKCHGQAFKNGVDC 180

Query: 181 VMVLRNSLIHMYGCCGHIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLQTAHDMFDAMP 240
           VMVLRNSLIHMYGCCG IELGRKVFDEMS  DLVSWNSIVTAYAR+GDL TAHD+FD MP
Sbjct: 181 VMVLRNSLIHMYGCCGDIELGRKVFDEMSARDLVSWNSIVTAYARIGDLHTAHDLFDEMP 240

Query: 241 ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNEGRS 300
           ERNVVSWNLMI EYLRGG+PGCAMKLFR M+K+GIRGNSTTMVN+LGAC RSARLNEGRS
Sbjct: 241 ERNVVSWNLMIGEYLRGGNPGCAMKLFRIMVKMGIRGNSTTMVNVLGACSRSARLNEGRS 300

Query: 301 VHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLGHCLHGN 360
           VHGFMYR  MKFC+FIDTAL+D+Y KCQRVSVARR+FDRM+NRNLVTWNAMVLGHCL GN
Sbjct: 301 VHGFMYRALMKFCIFIDTALIDLYSKCQRVSVARRVFDRMLNRNLVTWNAMVLGHCLQGN 360

Query: 361 PEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCACARAGLLEDA 420
           PEDGL+LFEEMAAKLRER GE    KK+ +DEG+R+VF DQITFIGVLCACARAGLL+DA
Sbjct: 361 PEDGLELFEEMAAKLRERTGETDHDKKYGRDEGKREVFPDQITFIGVLCACARAGLLKDA 420

Query: 421 NNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSELVVWTNL 480
            +YFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMP D EDFSSE  +W NL
Sbjct: 421 TSYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPGDNEDFSSESAIWINL 480

Query: 481 LATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG 540
           L +CRF GDVSLGEQIANYLI+ EPKNESYYRLLLNIYAVAG+WEDV+R+K+LMKEKRLG
Sbjct: 481 LTSCRFAGDVSLGEQIANYLINTEPKNESYYRLLLNIYAVAGKWEDVTRVKLLMKEKRLG 540

Query: 541 TFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMHKLASEVSLLSTIAAGQSDLRV 596
             PGCRL+DLKEIVHRLK GNLLQEGM+E+NTVM KLASEVSL S IAAGQSD+ V
Sbjct: 541 RTPGCRLIDLKEIVHRLKFGNLLQEGMEESNTVMLKLASEVSLWSNIAAGQSDIGV 591

[Close]

BLAST of Csor.00g060690 vs. TAIR 10
Match: AT3G51320.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 519.6 bits (1337), Expect = 3.3e-147
Identity = 248/506 (49.01%), Postives = 338/506 (66.80%), Query Frame = 0


Query: 55  LLQSCQSMRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLIKVPNAFC 114
           L++   S+  L Q+H  LITSG F    WA R+L  +S FGD  YTV I++   +   +C
Sbjct: 28  LVEDSNSITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYR--SIGKLYC 87

Query: 115 INRVIKAYSLSSDPLEAVFVYFQWLGAGFRPDTYTFLSLFCACASFGCGSSGRKCHGQAF 174
            N V KAY +SS P +A+  YF  L  GF PD+YTF+SL        C  SG+ CHGQA 
Sbjct: 88  ANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAI 147

Query: 175 KNGVDCVMVLRNSLIHMYGCCGHIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLQTAHD 234
           K+G D V+ ++NSL+HMY CCG ++L +K+F E+   D+VSWNSI+    R GD+  AH 
Sbjct: 148 KHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHK 207

Query: 235 MFDAMPERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSAR 294
           +FD MP++N++SWN+MIS YL   +PG ++ LFR M++ G +GN +T+V +L ACGRSAR
Sbjct: 208 LFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSAR 267

Query: 295 LNEGRSVHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLG 354
           L EGRSVH  + RT +   V IDTAL+DMYGKC+ V +ARR+FD +  RN VTWN M+L 
Sbjct: 268 LKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILA 327

Query: 355 HCLHGNPEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCACARA 414
           HCLHG PE GL+LFE M       NG                +  D++TF+GVLC CARA
Sbjct: 328 HCLHGRPEGGLELFEAMI------NG---------------MLRPDEVTFVGVLCGCARA 387

Query: 415 GLLEDANNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSEL 474
           GL+    +Y+  M++ F ++PNF H WC+AN+Y +AG  ++A E L+N+P+  ED + E 
Sbjct: 388 GLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPD--EDVTPES 447

Query: 475 VVWTNLLATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLM 534
             W NLL++ RF G+ +LGE IA  LI+ +P N  YY LL+NIY+V GRWEDV+R++ ++
Sbjct: 448 TKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMV 507

Query: 535 KEKRLGTFPGCRLVDLKEIVHRLKLG 561
           KE+++G  PGC LVDLKEIVH L+LG
Sbjct: 508 KERKIGRIPGCGLVDLKEIVHGLRLG 508

[Close]

BLAST of Csor.00g060690 vs. TAIR 10
Match: AT1G74630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 303.9 bits (777), Expect = 2.8e-82
Identity = 176/576 (30.56%), Postives = 291/576 (50.52%), Query Frame = 0


Query: 50  NRCHSLLQSCQSMRELVQIHGHLITSGLFNHHFWANRVLLQ-ASEFGD-IVYTVLIFKLI 109
           + C SLL SC+++R L QIHG  I  G+    ++  +++L  A    D + Y   +    
Sbjct: 6   HHCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCF 65

Query: 110 KVPNAFCINRVIKAYSLSSDPLEAVFVYFQWLGAGF-RPDTYTFLSLFCACASFGCGSSG 169
             P+AF  N +++ YS S +P  +V V+ + +  GF  PD+++F  +  A  +F    +G
Sbjct: 66  PEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTG 125

Query: 170 RKCHGQAFKNGVDCVMVLRNSLIHMYGCCGHIELGRKVFDEMSTLDLVSWNSIVTAYARV 229
            + H QA K+G++  + +  +LI MYG CG +E  RKVFDEM   +LV+WN+++TA  R 
Sbjct: 126 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRG 185

Query: 230 GDLQTAHDMFDAMPERNVVSWNLMISEYLRGGSPGCAMKL-------------------- 289
            D+  A ++FD M  RN  SWN+M++ Y++ G    A ++                    
Sbjct: 186 NDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIA 245

Query: 290 -----------FRNMMKIGIRGNSTTMVNILGACGRSARLNEGRSVHGFMYRTSMKFCVF 349
                      FR + + G+  N  ++  +L AC +S     G+ +HGF+ +    + V 
Sbjct: 246 HNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVS 305

Query: 350 IDTALVDMYGKCQRVSVARRLFDRM-VNRNLVTWNAMVLGHCLHGNPEDGLKLFEEMAAK 409
           ++ AL+DMY +C  V +AR +F+ M   R +V+W +M+ G  +HG  E+ ++LF EM A 
Sbjct: 306 VNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTA- 365

Query: 410 LRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCACARAGLLEDANNYFDEMINVFLVR 469
                                 V  D I+FI +L AC+ AGL+E+  +YF EM  V+ + 
Sbjct: 366 --------------------YGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIE 425

Query: 470 PNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSELVVWTNLLATCRFGGDVSLGE 529
           P   HY C+ ++Y  +G +Q+A + +  MP          +VW  LL  C   G++ L E
Sbjct: 426 PEIEHYGCMVDLYGRSGKLQKAYDFICQMP-----IPPTAIVWRTLLGACSSHGNIELAE 485

Query: 530 QIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLGTFPGCRLVDLKEIV 589
           Q+   L +++P N     LL N YA AG+W+DV+ I+  M  +R+       LV++ + +
Sbjct: 486 QVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTM 545

Query: 590 HRLKLGNLLQEGMKETNTVMHKLASEVSLLSTIAAG 591
           ++   G    E  K  +   H+   E+ L     AG
Sbjct: 546 YKFTAG----EKKKGIDIEAHEKLKEIILRLKDEAG 551

[Close]

BLAST of Csor.00g060690 vs. TAIR 10
Match: AT2G20540.1 (mitochondrial editing factor 21 )

HSP 1 Score: 295.8 bits (756), Expect = 7.7e-80
Identity = 163/525 (31.05%), Postives = 272/525 (51.81%), Query Frame = 0


Query: 56  LQSCQSMRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLIKVPNAFCI 115
           LQ  +S  E  +I+  +I  GL    F   +++    +  D+ Y   +F  +  PN F  
Sbjct: 17  LQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLY 76

Query: 116 NRVIKAYSLSSDPLEAVFVYFQWLGAGFR-PDTYTFLSLFCACASFGCGSSGRKCHGQAF 175
           N +I+AY+ +S   + + +Y Q L   F  PD +TF  +F +CAS G    G++ HG   
Sbjct: 77  NSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLC 136

Query: 176 KNGVDCVMVLRNSLIHMYGCCGHIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLQTAHD 235
           K G    +V  N+LI MY     +    KVFDEM   D++SWNS+++ YAR+G ++ A  
Sbjct: 137 KFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKG 196

Query: 236 MFDAMPERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSAR 295
           +F  M ++ +VSW  MIS Y   G    AM  FR M   GI  +  +++++L +C +   
Sbjct: 197 LFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGS 256

Query: 296 LNEGRSVHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLG 355
           L  G+ +H +  R        +  AL++MY KC  +S A +LF +M  +++++W+ M+ G
Sbjct: 257 LELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISG 316

Query: 356 HCLHGNPEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCACARA 415
           +  HGN    ++ F EM     + NG                     ITF+G+L AC+  
Sbjct: 317 YAYHGNAHGAIETFNEMQRAKVKPNG---------------------ITFLGLLSACSHV 376

Query: 416 GLLEDANNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSEL 475
           G+ ++   YFD M   + + P   HY CL +V   AG +++AVEI + MP        + 
Sbjct: 377 GMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMP-----MKPDS 436

Query: 476 VVWTNLLATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLM 535
            +W +LL++CR  G++ +     ++L+++EP++   Y LL NIYA  G+WEDVSR++ ++
Sbjct: 437 KIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMI 496

Query: 536 KEKRLGTFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMHKLAS 580
           + + +   PG  L+++  IV     G+  +    E + V+    S
Sbjct: 497 RNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQLFTS 515

[Close]

BLAST of Csor.00g060690 vs. TAIR 10
Match: AT2G42920.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 293.9 bits (751), Expect = 2.9e-79
Identity = 164/500 (32.80%), Postives = 267/500 (53.40%), Query Frame = 0


Query: 59  CQSMRELVQIHGHLITSGLFNHHFWANRVL-LQASEFGDIVYTVLIFKLIKVPNAFCINR 118
           C +MREL QIH  LI +GL +    A+RVL    +   D+ Y  L+F  I   N F  N 
Sbjct: 35  CSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNT 94

Query: 119 VIKAYSLSSDPLEAVFVYFQWL--GAGFRPDTYTFLSLFCACASFGCGSSGRKCHGQAFK 178
           +I+ +S SS P  A+ ++   L      +P   T+ S+F A    G    GR+ HG   K
Sbjct: 95  IIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIK 154

Query: 179 NGVDCVMVLRNSLIHMYGCCGHIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLQTAHDM 238
            G++    +RN+++HMY  CG +    ++F  M   D+V+WNS++  +A+ G +  A ++
Sbjct: 155 EGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNL 214

Query: 239 FDAMPERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARL 298
           FD MP+RN VSWN MIS ++R G    A+ +FR M +  ++ +  TMV++L AC      
Sbjct: 215 FDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGAS 274

Query: 299 NEGRSVHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLGH 358
            +GR +H ++ R   +    + TAL+DMY KC  +     +F+    + L  WN+M+LG 
Sbjct: 275 EQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGL 334

Query: 359 CLHGNPEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCACARAG 418
             +G  E  + LF E+     ER+G                +  D ++FIGVL ACA +G
Sbjct: 335 ANNGFEERAMDLFSEL-----ERSG----------------LEPDSVSFIGVLTACAHSG 394

Query: 419 LLEDANNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSELV 478
            +  A+ +F  M   +++ P+  HY  + NV   AGL+++A  +++NMP +      + V
Sbjct: 395 EVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVE-----EDTV 454

Query: 479 VWTNLLATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMK 538
           +W++LL+ CR  G+V + ++ A  L  ++P     Y LL N YA  G +E+    ++LMK
Sbjct: 455 IWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMK 508

Query: 539 EKRLGTFPGCRLVDLKEIVH 556
           E+++    GC  +++   VH
Sbjct: 515 ERQMEKEVGCSSIEVDFEVH 508

[Close]

BLAST of Csor.00g060690 vs. TAIR 10
Match: AT4G37380.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 293.1 bits (749), Expect = 5.0e-79
Identity = 168/531 (31.64%), Postives = 281/531 (52.92%), Query Frame = 0


Query: 55  LLQSCQSMRELVQIHGHLITSGLFNHHFW--ANRVLLQA-SEFGDIVYTVLIFKLIKVPN 114
           L+   QS+ E++QIH  ++   L  H  +   N  L +A +  G I +++ +F     P+
Sbjct: 35  LIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPD 94

Query: 115 AFCINRVIKAYSLSSDPLEAVFVYFQWLGAGFRPDTYTFLSLFCACASFGCGSSGRKCHG 174
            F     I   S++    +A  +Y Q L +   P+ +TF SL  +C++     SG+  H 
Sbjct: 95  LFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KSGKLIHT 154

Query: 175 QAFKNGVDCVMVLRNSLIHMYGCCGHIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLQT 234
              K G+     +   L+ +Y   G +   +KVFD M    LVS  +++T YA+ G+++ 
Sbjct: 155 HVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEA 214

Query: 235 AHDMFDAMPERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIG-IRGNSTTMVNILGACG 294
           A  +FD+M ER++VSWN+MI  Y + G P  A+ LF+ ++  G  + +  T+V  L AC 
Sbjct: 215 ARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACS 274

Query: 295 RSARLNEGRSVHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNA 354
           +   L  GR +H F+  + ++  V + T L+DMY KC  +  A  +F+    +++V WNA
Sbjct: 275 QIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNA 334

Query: 355 MVLGHCLHGNPEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCA 414
           M+ G+ +HG  +D L+LF EM                    +G   +    ITFIG L A
Sbjct: 335 MIAGYAMHGYSQDALRLFNEM--------------------QGITGLQPTDITFIGTLQA 394

Query: 415 CARAGLLEDANNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDF 474
           CA AGL+ +    F+ M   + ++P   HY CL ++   AG +++A E ++NM  D    
Sbjct: 395 CAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMD---- 454

Query: 475 SSELVVWTNLLATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRI 534
            ++ V+W+++L +C+  GD  LG++IA YLI +  KN   Y LL NIYA  G +E V+++
Sbjct: 455 -ADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKV 514

Query: 535 KVLMKEKRLGTFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMHKLASEV 582
           + LMKEK +   PG   ++++  VH  + G+      KE  T++ K++  +
Sbjct: 515 RNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERI 536

The following BLAST results are available for this feature:

BLAST of Csor.00g060690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WVU0	4.6e-146	49.01	Pentatricopeptide repeat-containing protein At3g51320 OS=Arabidopsis thaliana OX...	[more]
Q9CA54	4.0e-81	30.56	Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana OX...	[more]
Q9SIL5	1.1e-78	31.05	Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX...	[more]
Q9SJG6	4.1e-78	32.80	Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidop...	[more]
Q9SZT8	7.0e-78	31.64	Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis t...	[more]

BLAST of Csor.00g060690 vs. NCBI nr


Match Name	Identity	Description
KAG6603895.1	100.00	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022950690.1	99.16	pentatricopeptide repeat-containing protein At3g51320 isoform X1 [Cucurbita mosc...	[more]
XP_023544620.1	97.82	pentatricopeptide repeat-containing protein At3g51320 isoform X1 [Cucurbita pepo...	[more]
XP_022978359.1	95.81	pentatricopeptide repeat-containing protein At3g51320 isoform X1 [Cucurbita maxi...	[more]
XP_022950691.1	99.11	pentatricopeptide repeat-containing protein At3g51320 isoform X2 [Cucurbita mosc...	[more]

BLAST of Csor.00g060690 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1GGG4	99.16	pentatricopeptide repeat-containing protein At3g51320 isoform X1 OS=Cucurbita mo...	[more]
A0A6J1ITV7	95.81	pentatricopeptide repeat-containing protein At3g51320 isoform X1 OS=Cucurbita ma...	[more]
A0A6J1GFI6	99.11	pentatricopeptide repeat-containing protein At3g51320 isoform X2 OS=Cucurbita mo...	[more]
A0A6J1IPV8	95.90	pentatricopeptide repeat-containing protein At3g51320 isoform X2 OS=Cucurbita ma...	[more]
A0A6J1BTT2	82.89	pentatricopeptide repeat-containing protein At3g51320 OS=Momordica charantia OX=...	[more]

BLAST of Csor.00g060690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51320.1	3.3e-147	49.01	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G74630.1	2.8e-82	30.56	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G20540.1	7.7e-80	31.05	mitochondrial editing factor 21	[more]
AT2G42920.1	2.9e-79	32.80	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT4G37380.1	5.0e-79	31.64	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 276..378 e-value: 1.6E-18 score: 68.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 117..261 e-value: 1.2E-25 score: 92.6 coord: 379..549 e-value: 4.9E-17 score: 64.3
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 436..526
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 403..428 e-value: 0.019 score: 15.2 coord: 214..244 e-value: 2.2E-5 score: 24.4 coord: 186..209 e-value: 0.006 score: 16.8 coord: 346..371 e-value: 2.3E-6 score: 27.5 coord: 318..344 e-value: 0.072 score: 13.4 coord: 245..275 e-value: 3.1E-4 score: 20.8
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 346..371 e-value: 3.0E-5 score: 21.9 coord: 214..245 e-value: 2.0E-5 score: 22.4 coord: 245..272 e-value: 0.0017 score: 16.4 coord: 186..212 e-value: 0.0023 score: 16.0 coord: 403..429 e-value: 0.0028 score: 15.7
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 212..246 score: 11.136739
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 344..374 score: 10.270796
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 53..566
None	No IPR available	PANTHER	PTHR47928:SF120	OS05G0107000 PROTEIN	coord: 53..566

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g060690.m01	Csor.00g060690.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding