Csor.00g059500 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCTCCATGGGAGCTGCCTGCGCTAGGGTTTACGTAATGAGGAAGAAAACGGAGGAGAAACTGAAGAGGATGGAGCAGGAGAGAGCTGGCAGGTTAGAAGACACCGTCAAACCTCCAAAATCCGCCCATCACCACGCCGGCGGCGGCATCGCCGGAAAAGCCTGTAAGAAAGTCCATCCCGGTAACGTATTCGCGGTTTCCGCGAACTCTAATTCCTGA ATGTCCTCCATGGGAGCTGCCTGCGCTAGGGTTTACGTAATGAGGAAGAAAACGGAGGAGAAACTGAAGAGGATGGAGCAGGAGAGAGCTGGCAGGTTAGAAGACACCGTCAAACCTCCAAAATCCGCCCATCACCACGCCGGCGGCGGCATCGCCGGAAAAGCCTGTAAGAAAGTCCATCCCGGTAACGTATTCGCGGTTTCCGCGAACTCTAATTCCTGA ATGTCCTCCATGGGAGCTGCCTGCGCTAGGGTTTACGTAATGAGGAAGAAAACGGAGGAGAAACTGAAGAGGATGGAGCAGGAGAGAGCTGGCAGGTTAGAAGACACCGTCAAACCTCCAAAATCCGCCCATCACCACGCCGGCGGCGGCATCGCCGGAAAAGCCTGTAAGAAAGTCCATCCCGGTAACGTATTCGCGGTTTCCGCGAACTCTAATTCCTGA MSSMGAACARVYVMRKKTEEKLKRMEQERAGRLEDTVKPPKSAHHHAGGGIAGKACKKVHPGNVFAVSANSNS Homology
BLAST of Csor.00g059500 vs. NCBI nr
Match: KAG6604014.1 (hypothetical protein SDJN03_04623, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 145 bits (367), Expect = 6.78e-44 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0
BLAST of Csor.00g059500 vs. NCBI nr
Match: KGN48780.1 (hypothetical protein Csa_002943 [Cucumis sativus]) HSP 1 Score: 107 bits (268), Expect = 8.46e-29 Identity = 54/73 (73.97%), Postives = 64/73 (87.67%), Query Frame = 0
BLAST of Csor.00g059500 vs. NCBI nr
Match: KAA0036273.1 (hypothetical protein E6C27_scaffold18G00720 [Cucumis melo var. makuwa] >TYK12667.1 hypothetical protein E5676_scaffold255G002550 [Cucumis melo var. makuwa]) HSP 1 Score: 104 bits (260), Expect = 1.48e-27 Identity = 56/75 (74.67%), Postives = 63/75 (84.00%), Query Frame = 0
BLAST of Csor.00g059500 vs. NCBI nr
Match: KAG6594855.1 (hypothetical protein SDJN03_11408, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 96.3 bits (238), Expect = 3.10e-24 Identity = 50/73 (68.49%), Postives = 59/73 (80.82%), Query Frame = 0
BLAST of Csor.00g059500 vs. NCBI nr
Match: KAF4400541.1 (hypothetical protein G4B88_023334 [Cannabis sativa]) HSP 1 Score: 59.3 bits (142), Expect = 1.50e-09 Identity = 35/65 (53.85%), Postives = 46/65 (70.77%), Query Frame = 0
BLAST of Csor.00g059500 vs. ExPASy TrEMBL
Match: A0A0A0KGB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G500720 PE=4 SV=1) HSP 1 Score: 107 bits (268), Expect = 4.09e-29 Identity = 54/73 (73.97%), Postives = 64/73 (87.67%), Query Frame = 0
BLAST of Csor.00g059500 vs. ExPASy TrEMBL
Match: A0A5A7T065 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002550 PE=4 SV=1) HSP 1 Score: 104 bits (260), Expect = 7.18e-28 Identity = 56/75 (74.67%), Postives = 63/75 (84.00%), Query Frame = 0
BLAST of Csor.00g059500 vs. ExPASy TrEMBL
Match: A0A7J6I0D6 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_023334 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 7.27e-10 Identity = 35/65 (53.85%), Postives = 46/65 (70.77%), Query Frame = 0
BLAST of Csor.00g059500 vs. ExPASy TrEMBL
Match: A0A7J6E0F2 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_020454 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 1.67e-09 Identity = 35/65 (53.85%), Postives = 46/65 (70.77%), Query Frame = 0
BLAST of Csor.00g059500 vs. ExPASy TrEMBL
Match: A0A2N9EUS9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6201 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 8.61e-09 Identity = 36/71 (50.70%), Postives = 48/71 (67.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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