Csor.00g058600 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g058600
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Csor_Chr03: 7023661 .. 7032482 (-)
RNA-Seq Expression	Csor.00g058600
Synteny	Csor.00g058600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACAGATTTTACCGGAGAACCATTTCTCTCTTCAACAATCCACCTTCTGCATTACTACTCACGAAATCGAACACCCCATTAACCTTCTTTCTCAGAAAACCGCACTTGTCTCTGTCTCTGTCTCCAGTAAGCTCTCACACGAATCCCAATGGTACAACAGAGACTGGAGGGTTTGGGCCTATTCACCTGAAAACTACTCCGCATGATTCCACCAATGACAGAGACGCCGACGAATTTTCCGCTGACGTCGAAAAGGTGTACAGGATTCTAAGGAAATTCCACACCAGGGTTCCGAAACTCGAGCTTGCTCTGCAGGAATCCGGTGTCGTTTTACGCTCTGGTCTTCCGGAACGAGTTTTAAGCCGGTGTGGCGATGCCGGAAACTTGGGTTACCGGTTTTTCGTCTGGGCTTCGAAGCAACCGGGTTACAGGCATAGTTATGAAGTGTATAGAGCTATGATTAAAACCTTGGGGAAGATGAGACAGTTCGGAGCCGTATGGGCGCTGATTGAGGAAATGAGAAGAGAGAATCCATACATGTTAACGCCTGAAGTGTTCATTGTTTTGATGAGGAGGTTTGCTTCCGCCAGAATGGTAAAGAAAGCAGTTGAGGTGCTTGATGAAATGCCCAAGTATGGGTGCGAACCTGATGAGTACGTATTTGGGTGCCTTCTTGATGCTTTGTGTAAAAATGGCAGTGTTAAAGAAGCAGCTTCGCTATTTGAAGATATGAGAATTCGGTTTAATCCCACTCTGAGACATTTCACATCATTGTTGTATGGTTGGTGCCGAGAAGGCAAGATTTTGGAGGCGAAGCATGTATTGGTCCAAATAAAGGAAGCTGGTTTTGAGCCGGACATTGTGGTTTATAACAATTTACTTGGTGGGTATGCTCAAGCAGGGAAAATGCGGGATGCTTTTCATCTGTTGGAGCAAATGAAGAAAGTGAACTGTGGGCCAAATGCAGCTTCTTATACAATTCTGATTCAGGCGTTCTGTAAGATGGAAAAGATGGACGAGGCAATGCGTATTTTGGTCGAGATGCAAGGGAGGGGATGCGAGGCAGACGTTGTGACTTATACAACTCTGATAAGTGGATTTTGCAAGTGGGGGAACACAGACAGAGCATATGAGATATTGGATAATATGATTCAGAAAGGCCATGATCCTAGTCAGTTGAGTTATTTGTGTATAATGATGGCGCATGAAAAGAAGGAACAGCTGGAAGAGTGTATGGAACTCATGGAAGAAATGAGGAAGATTGGTTGCTTACCAGACCTTAACATCTATAATACAGTCATAAGGTTAGTATGCAAGTTGGGGGAGCTCAAGGAAGCTGTTCGACTTTGGGGTGAAATGGAAGCTGGTGGGCTTAATCCAGGTCTTGACACATATATTGTGATGGTTCATGGGTTTCTTAGTCAAGGTTGTCTAATTGAAGCTTGTGATTACTTCAAAGATATGGTTGAAAGAGGTCTATTATCTTCTCCACAGTATGGTACTTTGAAGGAATTAACAAATGCTCTTTTGAGAGATCAAAAGCTTGAATTGGCAAAAAACATGTGGAGTTGTATTACTACTAAAGGAGGTGAACTCAATGTCAGTGCTTGGACAATTTGGATTCACGCACTTTTTTCGAACGGGCATGTGAAGGAGGCTTGTTCTTACTGCTTGGACATGATGGATGCAGACCTAATGCCACAGCCGGATACTTTTGCCAAGCTTATGCGTGGACTGAAGAAACTTTACAATAGACAACTAGCTGTAGAGATCACAGATAAGGTGAGGAAGATGGCTGCAGATAGGAACATCACTTTCAAGATGTATAAGAGGCGAGGGGAGAGAGATTTAAAAGAGAAAATTAAGGCCAAAGTAGATGGAAGGAAAAGAAGAGCACGTAAACGCGTCTGGGGTGGAGTGCACAAAAAGACTAAATCCCTGTAATTTAAGAGCCTTGTCTCGAAGAATGATTCATTCTGCGGTTTCTGTAAAAGATTTGATTTGTAATGGTTGGTGCATCATTACTACTTCTACAATCTGCCGTCCATCATTTTACTGAATTGATGAGAAGTGTTCTTTGGCTTTCTGATTTAGTTCATTGCAGCCGATATCAGTTATAGGTGTATTCTATTAGTGAGGAAACTACACGTGGGATCTTTGTGGTCTAAAACTTGCCACAAGGAGAAGGTTAGTCAAAATGCTTTAACCCTGATGTTGCTATGCATGAAGATCAAGATAGCTGCTTATTTTGTGGCATTTTGGTTGCTAATTGGTACCATGTTCAGCATCTTAGTCATTTCTTTTGGCTTTCACCAGAAAATCAATGATATCGCTTCATTATGTCAAAATTTTTGATCTTCACGCTTTAACCCTGCTTTATGTACATTTTTATTTTTCAGAATGAAGATCTTGTTAAAAAAGGAAGACGGATATCCATTTAACCATCTGTTATGTGACTGTGTTTACTGCACTGATAGAAAACTGGATTTCCTGATAGATTAAGAAAATAGGCCATAGGTGGTGTCATAAACATTCATTCCAAAAGATCAAAAGCCAAAGGTAACCACAGAGGCTTAAGAGGATAAAAAATCTTCTACATAGAAACAAATTACAACGCAGTTTTGCTTTATCCATCTAGAACATAATGAATCCCAGTAATGAAAGATTTTACATTCTGAGGCCAAAGATACACTCAATTAGAGAAATTCAATAATTTCACATTAGCCAAACTATATGATCCCAAATGTTTCTGTACAACATAAATTCTAAATCACACACAAGGCAGTTTACTCTGGCGGACAGATGTAAAGCGTCAATATTAATATGTACAGGAATTCAGATATTACAGCTGAAATATATAAGATTGTGATTCAATCTGGGTCCTTGGAGATTTTGCAGTGTTTATTCATTAATATGACTTATCTCTATTTTAGCCTCGTTATTTTGTTTTCAAATGTATGCATGTTCATTGTTACTTCTTATAAATAAAGGAGATGATATTTTCACTTTCCGCTGTATCAGCTTGGTGCAGTAAGCTATTGGGTCAATTTCAAATAGGTATATCCATCTAATCCAACAAATAGTGTAGTACTACTACATGGGATCGCCATATCGGTTGGAGAGGGGAAGGACACATTCTTTATAAAGGTGTAGAAACCTCTCCCTAATAGATGTGTTTTAAAAATCTTGAGGAGAAACTTGAAAGGAAAAGTCTAAAAAAGATAGTATCCGTTAGCGGTAGGTTTAGGTTGTTACACTCTACGTGAGAAATTCACTTTCTCCTCAAGTTCCAGACATCATCGACTTCAGGTATGCAATTTTCTCGATAGAAAACTGTTACCTTTCCTTCAACTTAGACGAGTAGTTTACCTTTCCTTCAGTTTGCCAATATTTGCAGGGTTATACTTGAAGTGATTATGTCCAAAGTAATACTTGATACCTCTTCTCCTAGAAGAAATCAAGCATTCTTTTTGTCAGTTCCTTCTCTAACTAAATCAGACGTCTCATATCAACCACTTCAAAACTTCATTTGAGTTCCTTTATGTTTCCTTCTAGGAAATGATCTGTAATTACGATAATCTGTGTCATCATAGATTTCCTCTTGCAGGGAACAAAAATTAAGAGTAATCAAACTTCGTAATATTGATAGGAAGACAGAACTGTAGATAGGGGATATGCTATACCTGCAAAAGCTCCTCAATCACATTTTCAAGTGTTATCCTCCTCAGAGAGAGAGAGAGAGTTGCTCGTGTTTGAGACGAAGTACCTCATTGCCATGAAAGTCCTGGAGTGTTTCCAGTTCTGCTCTGCGGAACAGAGCTTTATGTTCTTTACCCAGTGAAAGGTTCGATAGCTGGTCAAAACAAAATCAAGCAATCAATTTTCAGGTCTCTGAGTCTGTTCTGTTTCCACCCACTGGGGACAAAGCTGCAGTTCATTTCATTCCTGAAAATTTGAATATGAGACTGCATGAACTGAGACTCATATATAGACATGAGGACAAGACTGAGGCCATACATCAACCCAGCAAACAACACCAAGAAGATGACTACTCCAATGCGACTGAAAAATCCTGAAGTGCATCAGCTATATTCAGTACTAGCTTCTTCTTCTTGACTGGTTGGTGTTGGTTCAGAAGAGGAGCTTCAGAAGCTAGCTACAAAGCACTGAAATTCTCGGAGACAGGAAAAAGAAGACGTGCTGTGCTGTGCTGTGCTGTGCTATGCTATGCTTGTTCCTGCTTCGGTTCTGTATGGTTAGTTAATTTGGTTGGCATATTTAGTTTCTTTTGTACGGTTAAGAATTGTACTTCATCATATAAGATTGTTCCAATTGTGTTTGGTTTTAAGGTGAGTTTTTAGATGACTTTTGAGAAAAAGACCTTTCTCCAGCAAAACTCCTTTGGTTGTGTTTTAGGATTTCCAAAACAAATTTGATTATAAAATCAAACAAAATGAGAATTGAGCTGCCGTGAGATTTCATATTGGTTGGAGAGTAAAATGAAACATTCGTTACAAGAATATGAAAATCACTCCATAACAAACTCGTTTTAAAGTCGTGAAGCTATCGACAATAAGTAATAGACCAAAATAGATATAAATGGATAATATCTAAAGGGGTGATGTTCATATTGAGAGGCAAACATGTATAATTTTAGGATGTCGTCAAGGCCTAGGGGCCGGAAAGAGGAGCTCAAGGCTTGGCCTTGTGGGTTTGGATGGGCTGAGTACGGCTGACAGAAATGCCGTCAATTCAATTATTGCAAAAGCGCGTGACACTGTGCACGTTGAAGGGTCCCGCCAATGCTCTTTTCTCTTACTACTAAGCATCCCATCACATCAACCGCTAAAATTACAACCCTTTCCTTTCTTTTTCCCACTGCCATTTCCTCTCTCTCTCCCTCTTTTCCCTCTCCTTAGATGAAACTACGCACAATAACTAACCAAACCCAAAAAAGGGGAAAATTAATTTTCAGATCCAAGATCTGGACTTTCAGACACTAAATGCTGCTGCTTTCCTTCTTCTCTTATCTGATCTAAGGTGATTTTTCCAGATCCCATCAAGTTTCTGTTACCTGTGCGTTTGTTTCCTTTATCCATTCTTTTATCTCAATCTCTGTGTTTGTTCACAACTTGAAAGGTTTCTGCTGCCTTTATATTTGTCTTTTGATACTGGGGGTGAAACACATCGACCCACAATGCTACATTACATCGATCTATGTTCTTCTTTCAGTTTCCAGTATGACATCGCATTGTTTTGCACGGATGGTGTTTGTTTTTTCCCCCCTTCAATCGTGGGCTAAATTTGCTTCGTTTCGTTAACTTTCTCGGATTTTATTTTCTGGGTTTAAAATCTCTGAAATTATAGGTTATAAATATGTGTTCTGTATGGAGGCCATAGATGATGATTTGAAAATTAGATTGAGCTTGTGCAGTTCGTGTTGTTTGCTGATTTAGTTTTGGAAGTTTACTCTTGAAATTTGCATCCTTTTGATTTACTCAATTTTGATGGGTGGGTGCTGGAAGTGGGGGATAAATAGACATGAGTGGCCACAGGCATCTAGTGTCTGAAAATTCCCTCATGGGTTTCATTCTAGTGTCGGTGGCTTTCTGTAACAAGTTGCTACTTTCAGGAGAGTGATTTTTTGAACTGAATTTTGGTTCCATGGAATCATATTGTCTATTTAATGGACATGCAATCTTACTATCGGTTGTTTATGTTTTCATCAAATGCAGAATCATATAATTTTGAACTATTAATCATGCAAAGGAGGCAACCTACTTCCACGCGCCGCAATGGAAGCTTTCCATTTGCTGGGGCTCTAAATGCGAAATCAAAATCGTCTCCCCTGTTATCTATTTGCCTGGTCCTTGTGGTAATTTTCACGATTAAGAATCAGTTTTCTTTCCTGCTTTGTTTTATATTTCTTATCGTTCTCTATAGATTATTGCGGTGGCTGGATGATAATCCGTGATTTCCATAGTAACGTTACCACTCAGTAAAACATAATCCATTGGTATTCCAATTTTGATTTTTTTTTTTGTGGGTTTTCACAGGGAGCAGTTCTTCTACTTGTCTATGCATTTAGTGGACCAGGTTTGCATGTGATTTACAATTTCTAGACTTCTCAATTCATGATAATGTGATAGGATACTTAGTATTCTACTGAGTTTTAATGCAGCATCGTTTTTTCTTTCCAAGTAGTTTCGGGTGTTTACTTTGATTATAGGCGAAACAATGAACAATGGGGATTATTGTCTCATTCATTGAACAACTATTTATCAATGCAGGTTCATTTGGAGGCAACAAGATAGTCAGCAAGATTGAAGGTAAATTAAGTTTTCCTTTGTAACCTCGACATTTAGGGATCAGGCGTCTCTCCCTCTTTATCACCTTTTCATGCAATGTTTTGCTTTCTTTCACATCAAAATCCTTTGTTTTTGAATCTATGCTTACTGAGCAATTGATAGATATTTTCCTTTGGGTAAGATCGAAGATGAAATATTGCCCCCAACACTTTGCACTATATGAATAATGAATGAAAAAACAACTTCATCCTTCATTGCTTGTGAACAGAGCACTCAACAATTAAAACATAACAGTAGCTTTGACACTTTCTTTGTACTTTATCTGCCATGTCTGAGCCTCCCAAAAGAAGAATCCTTGTTGAGACATTTACTCTTTCTAGACATTTTATCTTCCATAAGCCGTTGATAAAGTCCCTTGGGATCAAAGATTAAGGTGTGAATTCTTTGCCTGGGAAATGACCCGAGGAGCCCAATTTCCAAAGTCTACTATCTTTCCTCCCAAACAACCCCTGGGGGTTGCAATTTTATACTGTTTGTTTTCCTCCGTATCTTGATTCACTGGGAACAAATGATATCACATTCGTGTTTCTTTTGTTTGTTCTTGATGGGTTATTTTTAACGAACTTGCATGGTAAAGGCTGTAATATTAAAGAACTTCTATGGTGGTTTGATGATCTCGATTAATTTTAGTTACAATGTGCAAATGCTTGCAACTTGTAAAATGTAACGATTTGATAGTTGATCCTGGTGATGCTTCTATAAGATTTGATTGCTTCTATGAGCATTTACTGTCAAAATTGAACCTACAGGTGATTTTTCATGCACATTGGAGTTGTTGAAAGCAGTACCCATCTTAAAGAAAGCATATGGCGATAGTATGAACAAAGTTTTGCATGTTGGTCCGGATACCTGCTCTGTGGTATCTAAGCTATTGAAAGAAGGTGAAACAGAAGCATGGGGCATAGAACCATATGAAATTGAGGATGTTGATGAAAACTGCAAATCACTTGTGAACAAAGGCATTGTTCGTGTGGCGGATATCAAATTCCCTCTACCCTATAGAGCGAAGTCATTTTCTTACGTTATTGTGTCAGATGCAATGGATTACCTATCCCCCAAATACCTGAACAAAACTCTTCCTGAATTTGCAAGGGTTTCTTCTGATGGTCTTGTTATATTTTCTGGTAACTTTTTGAAATCTCTATGCAACACCGTAAAGATTGCTTTCCATTGCATCATAATTTCATTACCAATCACTTTGTTTTAAATTCATCATTGGCAAATATTTTTTGAAGTGTATCTACTTCACTACGGAAACTCCACAATCGTGTGGTGAATGACCTCATTGAATGTTGGATGCTCTGCTCCTGCTAAAAGTACAAATTGGGTAGAGAGGATTTGAATCTAGGATGGAAAACTTAAGTCAACTAGGAATTTCCAGTTGAACCATCACTGTGGAGTAGAATTACTTTGTTTTGTGATAAAAGCAGCTACTACTGTTCAAATATTACACTTCTTTTCTGGACCCACAAGGAACCAATTGGAGAGTTCCTCTTAGCTGATTGTCATTATAGCAAGCATACATAATTATTTGGACTATAAATCGTGTCACCACGTTGTGGATACAGAGAAATATTTAATAAACTAGGAGTCTTCTCTATTGCGTAACTTGTTTCTCCTTTTCTTCTTGCTAACAACATTTTGATGTCAGTCTTCATTATTTCTTATCCGACGTTAATATCCTCTATTTGATAAAGGTCTGGTGACCTGTTACTCTCTCCTTTTTGTATAGGTTCACCTGGTCAGCAGAAAGCAAAAGTAAACGAGCTAACGAAGTTTGGACGGCCGGTAAGCTACTACTTATAGCATGTTATATGGATCTTATGTGTGCCATTTTTATTGTGTATGCTCATGCATAATTCTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTGTGTTTTTCACATAAAATTATAAACAATATGGATAATGTGTAAATTAACGGATCTACTTGCTCGTGGAACTATAGTGAATAGACGAGCTCTTAAAACCAACTCCTATGGCTTTCATAACTGTGGTTTAAGTTATGTTACAGCTAATAAGCTGTAGACATCTATTGCACAATTTGTGCATGAATGAATCGTTAGGGAAAATTGCACATTGCCCTGCGCCTCCCCTCAATTAGGGATATCTGTTGTTCATTTAATTATTTTCTAGAATTACTTCAATCTTGAATTGGATGCGTTAAGGCCGTAAGTAAGTAGTTAGAGCATATTATTTAGGTGGTATACTTGAGAGGTGCATAATATGGTTGTGTGTGATTTCATTAATGTAATGGATGCATTACTTCATATTTGAAGGCCAAAATGAGGAGCTCGTCTTGGTGGATTCGATTTTTCACCCAAACAAGCTTAGAAGAGAACGAAGGCGCTGCCAAGAACTTTAAGCAAGCAGCATCCAAGCAGTCTTACAAGCCCGGCTGCCAAGTTTTCCATCTCAATTCATACCATTGA

mRNA sequence

ATGCACAGATTTTACCGGAGAACCATTTCTCTCTTCAACAATCCACCTTCTGCATTACTACTCACGAAATCGAACACCCCATTAACCTTCTTTCTCAGAAAACCGCACTTGTCTCTGTCTCTGTCTCCAGTAAGCTCTCACACGAATCCCAATGGTACAACAGAGACTGGAGGGTTTGGGCCTATTCACCTGAAAACTACTCCGCATGATTCCACCAATGACAGAGACGCCGACGAATTTTCCGCTGACGTCGAAAAGGTGTACAGGATTCTAAGGAAATTCCACACCAGGGTTCCGAAACTCGAGCTTGCTCTGCAGGAATCCGGTGTCGTTTTACGCTCTGGTCTTCCGGAACGAGTTTTAAGCCGGTGTGGCGATGCCGGAAACTTGGGTTACCGGTTTTTCGTCTGGGCTTCGAAGCAACCGGGTTACAGGCATAGTTATGAAGTGTATAGAGCTATGATTAAAACCTTGGGGAAGATGAGACAGTTCGGAGCCGTATGGGCGCTGATTGAGGAAATGAGAAGAGAGAATCCATACATGTTAACGCCTGAAGTGTTCATTGTTTTGATGAGGAGGTTTGCTTCCGCCAGAATGGTAAAGAAAGCAGTTGAGGTGCTTGATGAAATGCCCAAGTATGGGTGCGAACCTGATGAGTACGTATTTGGGTGCCTTCTTGATGCTTTGTGTAAAAATGGCAGTGTTAAAGAAGCAGCTTCGCTATTTGAAGATATGAGAATTCGGTTTAATCCCACTCTGAGACATTTCACATCATTGTTGTATGGTTGGTGCCGAGAAGGCAAGATTTTGGAGGCGAAGCATGTATTGGTCCAAATAAAGGAAGCTGGTTTTGAGCCGGACATTGTGGTTTATAACAATTTACTTGGTGGGTATGCTCAAGCAGGGAAAATGCGGGATGCTTTTCATCTGTTGGAGCAAATGAAGAAAGTGAACTGTGGGCCAAATGCAGCTTCTTATACAATTCTGATTCAGGCGTTCTGTAAGATGGAAAAGATGGACGAGGCAATGCGTATTTTGGTCGAGATGCAAGGGAGGGGATGCGAGGCAGACGTTGTGACTTATACAACTCTGATAAGTGGATTTTGCAAGTGGGGGAACACAGACAGAGCATATGAGATATTGGATAATATGATTCAGAAAGGCCATGATCCTAGTCAGTTGAGTTATTTGTGTATAATGATGGCGCATGAAAAGAAGGAACAGCTGGAAGAGTGTATGGAACTCATGGAAGAAATGAGGAAGATTGGTTGCTTACCAGACCTTAACATCTATAATACAGTCATAAGGTTAGTATGCAAGTTGGGGGAGCTCAAGGAAGCTGTTCGACTTTGGGGTGAAATGGAAGCTGGTGGGCTTAATCCAGGTCTTGACACATATATTGTGATGGTTCATGGGTTTCTTAGTCAAGGTTGTCTAATTGAAGCTTGTGATTACTTCAAAGATATGGTTGAAAGAGGTCTATTATCTTCTCCACAGTATGGTACTTTGAAGGAATTAACAAATGCTCTTTTGAGAGATCAAAAGCTTGAATTGGCAAAAAACATGTGGAGTTGTATTACTACTAAAGGAGGTGAACTCAATGTCAGTGCTTGGACAATTTGGATTCACGCACTTTTTTCGAACGGGCATGTGAAGGAGGCTTGTTCTTACTGCTTGGACATGATGGATGCAGACCTAATGCCACAGCCGGATACTTTTGCCAAGCTTATGCGTGGACTGAAGAAACTTTACAATAGACAACTAGCTGTAGAGATCACAGATAAGGTGAGGAAGATGGCTGCAGATAGGAACATCACTTTCAAGATGTATAAGAGGCGAGGGGAGAGAGATTTAAAAGAGAAAATTAAGGCCAAAGTAGATGGAAGGAAAAGAAGAGCACCCGATATCAGTTATAGGTGTATTCTATTAGTGAGGAAACTACACGTGGGATCTTTGTGGTCTAAAACTTGCCACAAGGAGAAGGGAACAAAAATTAAGATTCTGCTCTGCGGAACAGAGCTTTATGTTCTTTACCCAGTGAAAGGTTCGATAGCTGGTCAAAACAAAATCAAGCAATCAATTTTCAGAAGAGGAGCTTCAGAAGCTAGCTACAAAGCACTGAAATTCTCGGAGACAGGAAAAAGAAGACGTGCTGTGCTGTGCTGTGCTGTGCTATGCTATGCTTGTTCCTGCTTCGGTTCTGTATGGATGTCGTCAAGGCCTAGGGGCCGGAAAGAGGAGCTCAAGGCTTGGCCTTGTGGGTTTGGATGGGCTGAGAGGCAACCTACTTCCACGCGCCGCAATGGAAGCTTTCCATTTGCTGGGGCTCTAAATGCGAAATCAAAATCGTCTCCCCTGTTATCTATTTGCCTGGTCCTTGTGGGAGCAGTTCTTCTACTTGTCTATGCATTTAGTGGACCAGGTTCATTTGGAGGCAACAAGATAGTCAGCAAGATTGAAGGTGATTTTTCATGCACATTGGAGTTGTTGAAAGCAGTACCCATCTTAAAGAAAGCATATGGCGATAGTATGAACAAAGTTTTGCATGTTGGTCCGGATACCTGCTCTGTGGTATCTAAGCTATTGAAAGAAGGTGAAACAGAAGCATGGGGCATAGAACCATATGAAATTGAGGATGTTGATGAAAACTGCAAATCACTTGTGAACAAAGGCATTGTTCGTGTGGCGGATATCAAATTCCCTCTACCCTATAGAGCGAAGTCATTTTCTTACGTTATTGTGTCAGATGCAATGGATTACCTATCCCCCAAATACCTGAACAAAACTCTTCCTGAATTTGCAAGGGTTTCTTCTGATGGTCTTGTTATATTTTCTGGTTCACCTGGTCAGCAGAAAGCAAAAGTAAACGAGCTAACGAAGTTTGGACGGCCGGCCAAAATGAGGAGCTCGTCTTGGTGGATTCGATTTTTCACCCAAACAAGCTTAGAAGAGAACGAAGGCGCTGCCAAGAACTTTAAGCAAGCAGCATCCAAGCAGTCTTACAAGCCCGGCTGCCAAGTTTTCCATCTCAATTCATACCATTGA

Coding sequence (CDS)

ATGCACAGATTTTACCGGAGAACCATTTCTCTCTTCAACAATCCACCTTCTGCATTACTACTCACGAAATCGAACACCCCATTAACCTTCTTTCTCAGAAAACCGCACTTGTCTCTGTCTCTGTCTCCAGTAAGCTCTCACACGAATCCCAATGGTACAACAGAGACTGGAGGGTTTGGGCCTATTCACCTGAAAACTACTCCGCATGATTCCACCAATGACAGAGACGCCGACGAATTTTCCGCTGACGTCGAAAAGGTGTACAGGATTCTAAGGAAATTCCACACCAGGGTTCCGAAACTCGAGCTTGCTCTGCAGGAATCCGGTGTCGTTTTACGCTCTGGTCTTCCGGAACGAGTTTTAAGCCGGTGTGGCGATGCCGGAAACTTGGGTTACCGGTTTTTCGTCTGGGCTTCGAAGCAACCGGGTTACAGGCATAGTTATGAAGTGTATAGAGCTATGATTAAAACCTTGGGGAAGATGAGACAGTTCGGAGCCGTATGGGCGCTGATTGAGGAAATGAGAAGAGAGAATCCATACATGTTAACGCCTGAAGTGTTCATTGTTTTGATGAGGAGGTTTGCTTCCGCCAGAATGGTAAAGAAAGCAGTTGAGGTGCTTGATGAAATGCCCAAGTATGGGTGCGAACCTGATGAGTACGTATTTGGGTGCCTTCTTGATGCTTTGTGTAAAAATGGCAGTGTTAAAGAAGCAGCTTCGCTATTTGAAGATATGAGAATTCGGTTTAATCCCACTCTGAGACATTTCACATCATTGTTGTATGGTTGGTGCCGAGAAGGCAAGATTTTGGAGGCGAAGCATGTATTGGTCCAAATAAAGGAAGCTGGTTTTGAGCCGGACATTGTGGTTTATAACAATTTACTTGGTGGGTATGCTCAAGCAGGGAAAATGCGGGATGCTTTTCATCTGTTGGAGCAAATGAAGAAAGTGAACTGTGGGCCAAATGCAGCTTCTTATACAATTCTGATTCAGGCGTTCTGTAAGATGGAAAAGATGGACGAGGCAATGCGTATTTTGGTCGAGATGCAAGGGAGGGGATGCGAGGCAGACGTTGTGACTTATACAACTCTGATAAGTGGATTTTGCAAGTGGGGGAACACAGACAGAGCATATGAGATATTGGATAATATGATTCAGAAAGGCCATGATCCTAGTCAGTTGAGTTATTTGTGTATAATGATGGCGCATGAAAAGAAGGAACAGCTGGAAGAGTGTATGGAACTCATGGAAGAAATGAGGAAGATTGGTTGCTTACCAGACCTTAACATCTATAATACAGTCATAAGGTTAGTATGCAAGTTGGGGGAGCTCAAGGAAGCTGTTCGACTTTGGGGTGAAATGGAAGCTGGTGGGCTTAATCCAGGTCTTGACACATATATTGTGATGGTTCATGGGTTTCTTAGTCAAGGTTGTCTAATTGAAGCTTGTGATTACTTCAAAGATATGGTTGAAAGAGGTCTATTATCTTCTCCACAGTATGGTACTTTGAAGGAATTAACAAATGCTCTTTTGAGAGATCAAAAGCTTGAATTGGCAAAAAACATGTGGAGTTGTATTACTACTAAAGGAGGTGAACTCAATGTCAGTGCTTGGACAATTTGGATTCACGCACTTTTTTCGAACGGGCATGTGAAGGAGGCTTGTTCTTACTGCTTGGACATGATGGATGCAGACCTAATGCCACAGCCGGATACTTTTGCCAAGCTTATGCGTGGACTGAAGAAACTTTACAATAGACAACTAGCTGTAGAGATCACAGATAAGGTGAGGAAGATGGCTGCAGATAGGAACATCACTTTCAAGATGTATAAGAGGCGAGGGGAGAGAGATTTAAAAGAGAAAATTAAGGCCAAAGTAGATGGAAGGAAAAGAAGAGCACCCGATATCAGTTATAGGTGTATTCTATTAGTGAGGAAACTACACGTGGGATCTTTGTGGTCTAAAACTTGCCACAAGGAGAAGGGAACAAAAATTAAGATTCTGCTCTGCGGAACAGAGCTTTATGTTCTTTACCCAGTGAAAGGTTCGATAGCTGGTCAAAACAAAATCAAGCAATCAATTTTCAGAAGAGGAGCTTCAGAAGCTAGCTACAAAGCACTGAAATTCTCGGAGACAGGAAAAAGAAGACGTGCTGTGCTGTGCTGTGCTGTGCTATGCTATGCTTGTTCCTGCTTCGGTTCTGTATGGATGTCGTCAAGGCCTAGGGGCCGGAAAGAGGAGCTCAAGGCTTGGCCTTGTGGGTTTGGATGGGCTGAGAGGCAACCTACTTCCACGCGCCGCAATGGAAGCTTTCCATTTGCTGGGGCTCTAAATGCGAAATCAAAATCGTCTCCCCTGTTATCTATTTGCCTGGTCCTTGTGGGAGCAGTTCTTCTACTTGTCTATGCATTTAGTGGACCAGGTTCATTTGGAGGCAACAAGATAGTCAGCAAGATTGAAGGTGATTTTTCATGCACATTGGAGTTGTTGAAAGCAGTACCCATCTTAAAGAAAGCATATGGCGATAGTATGAACAAAGTTTTGCATGTTGGTCCGGATACCTGCTCTGTGGTATCTAAGCTATTGAAAGAAGGTGAAACAGAAGCATGGGGCATAGAACCATATGAAATTGAGGATGTTGATGAAAACTGCAAATCACTTGTGAACAAAGGCATTGTTCGTGTGGCGGATATCAAATTCCCTCTACCCTATAGAGCGAAGTCATTTTCTTACGTTATTGTGTCAGATGCAATGGATTACCTATCCCCCAAATACCTGAACAAAACTCTTCCTGAATTTGCAAGGGTTTCTTCTGATGGTCTTGTTATATTTTCTGGTTCACCTGGTCAGCAGAAAGCAAAAGTAAACGAGCTAACGAAGTTTGGACGGCCGGCCAAAATGAGGAGCTCGTCTTGGTGGATTCGATTTTTCACCCAAACAAGCTTAGAAGAGAACGAAGGCGCTGCCAAGAACTTTAAGCAAGCAGCATCCAAGCAGTCTTACAAGCCCGGCTGCCAAGTTTTCCATCTCAATTCATACCATTGA

Protein sequence

MHRFYRRTISLFNNPPSALLLTKSNTPLTFFLRKPHLSLSLSPVSSHTNPNGTTETGGFGPIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERVLSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRRENPYMLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFHLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVTYTTLISGFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMRKIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLIEACDYFKDMVERGLLSSPQYGTLKELTNALLRDQKLELAKNMWSCITTKGGELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMAADRNITFKMYKRRGERDLKEKIKAKVDGRKRRAPDISYRCILLVRKLHVGSLWSKTCHKEKGTKIKILLCGTELYVLYPVKGSIAGQNKIKQSIFRRGASEASYKALKFSETGKRRRAVLCCAVLCYACSCFGSVWMSSRPRGRKEELKAWPCGFGWAERQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIVSKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYEIEDVDENCKSLVNKGIVRVADIKFPLPYRAKSFSYVIVSDAMDYLSPKYLNKTLPEFARVSSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKNFKQAASKQSYKPGCQVFHLNSYH

Homology

[Close]

BLAST of Csor.00g058600 vs. ExPASy Swiss-Prot
Match: P0C8A0 (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX=3702 GN=At3g49730 PE=2 SV=1)

HSP 1 Score: 820.5 bits (2118), Expect = 2.1e-236
Identity = 392/571 (68.65%), Postives = 474/571 (83.01%), Query Frame = 0


Query: 74  DRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERVLSRCGDAGNLGYR 133
           ++  DEF+ +VEK+YRILR  H+RVPKLELAL ESG+ LR GL  RVLSRCGDAGNLGYR
Sbjct: 57  EKHEDEFAGEVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYR 116

Query: 134 FFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRRENPYMLTPEVFIVLMRR 193
           FF+WA+KQPGY HSYEV ++M+  L KMRQFGAVW LIEEMR+ NP ++ PE+F+VLMRR
Sbjct: 117 FFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRR 176

Query: 194 FASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRIRFNPTL 253
           FASA MVKKAVEVLDEMPKYG EPDEYVFGCLLDALCKNGSVKEA+ +FEDMR +F P L
Sbjct: 177 FASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNL 236

Query: 254 RHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFHLLEQ 313
           R+FTSLLYGWCREGK++EAK VLVQ+KEAG EPDIVV+ NLL GYA AGKM DA+ L+  
Sbjct: 237 RYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMND 296

Query: 314 MKKVNCGPNAASYTILIQAFCKMEK-MDEAMRILVEMQGRGCEADVVTYTTLISGFCKWG 373
           M+K    PN   YT+LIQA C+ EK MDEAMR+ VEM+  GCEAD+VTYT LISGFCKWG
Sbjct: 297 MRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWG 356

Query: 374 NTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMRKIGCLPDLNIYN 433
             D+ Y +LD+M +KG  PSQ++Y+ IM+AHEKKEQ EEC+EL+E+M++ GC PDL IYN
Sbjct: 357 MIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYN 416

Query: 434 TVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLIEACDYFKDMVER 493
            VIRL CKLGE+KEAVRLW EMEA GL+PG+DT+++M++GF SQG LIEAC++FK+MV R
Sbjct: 417 VVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSR 476

Query: 494 GLLSSPQYGTLKELTNALLRDQKLELAKNMWSCITTKGG--ELNVSAWTIWIHALFSNGH 553
           G+ S+PQYGTLK L N L+RD KLE+AK++WSCI+ K    ELNVSAWTIWIHAL++ GH
Sbjct: 477 GIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGH 536

Query: 554 VKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMAADRNITFKMY 613
           VKEACSYCLDMM+ DLMPQP+T+AKLM+GL KLYNR +A EIT+KV KMA++R ++FKMY
Sbjct: 537 VKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKLYNRTIAAEITEKVVKMASEREMSFKMY 596

Query: 614 KRRGERDLKEKIKAK--VDGRKRRAPDISYR 640
           K++GE DL EK K K   +G+K+      Y+
Sbjct: 597 KKKGEEDLIEKAKPKGNKEGKKKGTDHQRYK 627

[Close]

BLAST of Csor.00g058600 vs. ExPASy Swiss-Prot
Match: Q9FH87 (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana OX=3702 GN=At5g65820 PE=3 SV=1)

HSP 1 Score: 819.3 bits (2115), Expect = 4.8e-236
Identity = 404/635 (63.62%), Postives = 500/635 (78.74%), Query Frame = 0


Query: 1   MHRFYRRTISLFNNPPSALLLTKSNTPLTFFLRKPHLSLSLSPVSSHTNPNGTTETGGFG 60
           MHRF      L +     L  ++  +      R  H+S +L      +N        G G
Sbjct: 8   MHRFSPIVEFLLSKRQIFLHYSQFKSRFDLIHRSFHVSRALEDNFRRSN--------GIG 67

Query: 61  PIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERV 120
            + L+ + +D T +   DEF++DVEK YRILRKFH+RVPKLELAL ESGV LR GL ERV
Sbjct: 68  LVCLEKSHNDRTKNSKYDEFASDVEKSYRILRKFHSRVPKLELALNESGVELRPGLIERV 127

Query: 121 LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRRENPY 180
           L+RCGDAGNLGYRFFVWA+KQP Y HS EVY++M+K L KMRQFGAVW LIEEMR+ENP 
Sbjct: 128 LNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQ 187

Query: 181 MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240
           ++ PE+F+VL++RFASA MVKKA+EVLDEMPK+G EPDEYVFGCLLDALCK+GSVK+AA 
Sbjct: 188 LIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAK 247

Query: 241 LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300
           LFEDMR+RF   LR+FTSLLYGWCR GK++EAK+VLVQ+ EAGFEPDIV Y NLL GYA 
Sbjct: 248 LFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYAN 307

Query: 301 AGKMRDAFHLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT 360
           AGKM DA+ LL  M++    PNA  YT+LIQA CK+++M+EAM++ VEM+   CEADVVT
Sbjct: 308 AGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVT 367

Query: 361 YTTLISGFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR 420
           YT L+SGFCKWG  D+ Y +LD+MI+KG  PS+L+Y+ IM+AHEKKE  EEC+ELME+MR
Sbjct: 368 YTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMR 427

Query: 421 KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI 480
           +I   PD+ IYN VIRL CKLGE+KEAVRLW EME  GL+PG+DT+++M++G  SQGCL+
Sbjct: 428 QIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLL 487

Query: 481 EACDYFKDMVERGLLSSPQYGTLKELTNALLRDQKLELAKNMWSCITTKGG-ELNVSAWT 540
           EA D+FK+MV RGL S  QYGTLK L N +L+D+KLE+AK++WSCIT+KG  ELNV +WT
Sbjct: 488 EASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWT 547

Query: 541 IWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKM 600
           IWIHALFS G+ KEACSYC++M++ D MPQPDTFAKLM+GLKKLYNR+ A EIT+KVR M
Sbjct: 548 IWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNREFAGEITEKVRNM 607

Query: 601 AADRNITFKMYKRRGERDLKEKIKAKVD--GRKRR 633
           AA+R ++FKMYKRRG +DL EK K+K D  G+K++
Sbjct: 608 AAEREMSFKMYKRRGVQDLTEKAKSKQDREGKKKQ 634

[Close]

BLAST of Csor.00g058600 vs. ExPASy Swiss-Prot
Match: Q9M2Y6 (Probable pectin methylesterase CGR2 OS=Arabidopsis thaliana OX=3702 GN=CGR2 PE=2 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 4.2e-107
Identity = 191/260 (73.46%), Postives = 220/260 (84.62%), Query Frame = 0


Query: 758  AERQPTSTRR---NGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNK 817
            A RQ  STRR    GSFPFAGAL++KS+SSPLLSICLVLVGA LL+ YA+SGPG F   K
Sbjct: 2    ARRQVGSTRRVGDGGSFPFAGALHSKSRSSPLLSICLVLVGACLLIGYAYSGPGIFKSIK 61

Query: 818  IVSKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEP 877
             VSK+ GD+SCT E+ +A+P+LKKAYGD M KVLHVGPDTCSVVS LLKE ETEAWG+EP
Sbjct: 62   EVSKVTGDYSCTAEVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSSLLKEEETEAWGVEP 121

Query: 878  YEIEDVDENCKSLVNKGIVRVADIKFPLPYRAKSFSYVIVSDAMDYLSPKYLNKTLPEFA 937
            Y+IED D +CKS V+KG+VRVADIKFPLPYRAKSFS VIVSDA+DYLSPKYLNKT+PE A
Sbjct: 122  YDIEDADSHCKSFVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPELA 181

Query: 938  RVSSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKNFKQ 997
            RV+SDG+V+F+G PGQQ+AKV EL+KFGRPAKMRS+SWW RFF QT+LEEN+  +K F+Q
Sbjct: 182  RVASDGVVLFAGLPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSKKFEQ 241

Query: 998  AASKQSYKPGCQVFHLNSYH 1015
            A SK  YKP CQVFHL   H
Sbjct: 242  AVSKGLYKPACQVFHLKPLH 261

[Close]

BLAST of Csor.00g058600 vs. ExPASy Swiss-Prot
Match: Q0WPN7 (Probable pectin methylesterase CGR3 OS=Arabidopsis thaliana OX=3702 GN=CGR3 PE=2 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 5.5e-107
Identity = 186/257 (72.37%), Postives = 220/257 (85.60%), Query Frame = 0


Query: 758  AERQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIVS 817
            + RQ      +GSFPF GAL++KS+SSPLLS+CLVLVGA LL+ YA+SGPG F   + VS
Sbjct: 2    SRRQVRRVGDSGSFPFVGALHSKSRSSPLLSVCLVLVGACLLIGYAYSGPGMFKSIREVS 61

Query: 818  KIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYEI 877
            KI GD+SCT E+ +A+PILK AYGDSM KVLHVGP+TCSVVS LL E ETEAWG+EPY++
Sbjct: 62   KITGDYSCTAEVQRAIPILKSAYGDSMRKVLHVGPETCSVVSSLLNEEETEAWGVEPYDV 121

Query: 878  EDVDENCKSLVNKGIVRVADIKFPLPYRAKSFSYVIVSDAMDYLSPKYLNKTLPEFARVS 937
            ED D NCKSL++KG+VRVADIKFPLPYR+KSFS VIVSDA+DYLSP+YLNKT+PE ARV+
Sbjct: 122  EDADSNCKSLLHKGLVRVADIKFPLPYRSKSFSLVIVSDALDYLSPRYLNKTVPELARVA 181

Query: 938  SDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKNFKQAAS 997
            SDG+V+ +G+PGQQKAK  EL+KFGRPAKMRSSSWWIRFF+QT+LEENE A+K F+QAAS
Sbjct: 182  SDGVVLLAGNPGQQKAKGGELSKFGRPAKMRSSSWWIRFFSQTNLEENEAASKKFEQAAS 241

Query: 998  KQSYKPGCQVFHLNSYH 1015
            K SYKP CQVFHL   H
Sbjct: 242  KSSYKPACQVFHLKPLH 258

[Close]

BLAST of Csor.00g058600 vs. ExPASy Swiss-Prot
Match: Q9FVX2 (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 258.5 bits (659), Expect = 3.3e-67
Identity = 142/441 (32.20%), Postives = 247/441 (56.01%), Query Frame = 0


Query: 83  DVEKVYRILRKFHTRVPKLEL--ALQESGVVLRSGLPERVLSRCGDAGNLGYRFFVWASK 142
           DV  V + + K     P+L L  AL +SG+ +   + E VL+R  +AG L YRFF W+ K
Sbjct: 67  DVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEK 126

Query: 143 QPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRRENPYMLTPEVFIVLMRRFASARMV 202
           Q  Y HS   Y  MI++  K+RQ+  +W LI  MR++   ML  E F ++MR++A A+ V
Sbjct: 127 QRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKK--MLNVETFCIVMRKYARAQKV 186

Query: 203 KKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRIRFNPTLRHFTSLL 262
            +A+   + M KY   P+   F  LL ALCK+ +V++A  +FE+MR RF P  + ++ LL
Sbjct: 187 DEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILL 246

Query: 263 YGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFHLLEQMKKVNCG 322
            GW +E  + +A+ V  ++ +AG  PDIV Y+ ++    +AG++ +A  ++  M    C 
Sbjct: 247 EGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICK 306

Query: 323 PNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVTYTTLISGFCKWGNTDRAYEI 382
           P    Y++L+  +    +++EA+   +EM+  G +ADV  + +LI  FCK       Y +
Sbjct: 307 PTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRV 366

Query: 383 LDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMRKIGCLPDLNIYNTVIRLVCK 442
           L  M  KG  P+  S   I+    ++ + +E  ++  +M K+ C PD + Y  VI++ C+
Sbjct: 367 LKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCE 426

Query: 443 LGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLIEACDYFKDMVERGLL-SSPQ 502
             E++ A ++W  M   G+ P + T+ V+++G   +    +AC   ++M+E G+  S   
Sbjct: 427 KKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVT 486

Query: 503 YGTLKELTNALLRDQKLELAK 521
           +G L++L   L+++++ ++ K
Sbjct: 487 FGRLRQL---LIKEEREDVLK 501

[Close]

BLAST of Csor.00g058600 vs. NCBI nr
Match: KAG6604102.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 2058 bits (5332), Expect = 0.0
Identity = 1014/1014 (100.00%), Postives = 1014/1014 (100.00%), Query Frame = 0


Query: 1    MHRFYRRTISLFNNPPSALLLTKSNTPLTFFLRKPHLSLSLSPVSSHTNPNGTTETGGFG 60
            MHRFYRRTISLFNNPPSALLLTKSNTPLTFFLRKPHLSLSLSPVSSHTNPNGTTETGGFG
Sbjct: 1    MHRFYRRTISLFNNPPSALLLTKSNTPLTFFLRKPHLSLSLSPVSSHTNPNGTTETGGFG 60

Query: 61   PIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERV 120
            PIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERV
Sbjct: 61   PIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERV 120

Query: 121  LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRRENPY 180
            LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRRENPY
Sbjct: 121  LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRRENPY 180

Query: 181  MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240
            MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS
Sbjct: 181  MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240

Query: 241  LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300
            LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ
Sbjct: 241  LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300

Query: 301  AGKMRDAFHLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT 360
            AGKMRDAFHLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT
Sbjct: 301  AGKMRDAFHLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT 360

Query: 361  YTTLISGFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR 420
            YTTLISGFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR
Sbjct: 361  YTTLISGFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR 420

Query: 421  KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI 480
            KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI
Sbjct: 421  KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI 480

Query: 481  EACDYFKDMVERGLLSSPQYGTLKELTNALLRDQKLELAKNMWSCITTKGGELNVSAWTI 540
            EACDYFKDMVERGLLSSPQYGTLKELTNALLRDQKLELAKNMWSCITTKGGELNVSAWTI
Sbjct: 481  EACDYFKDMVERGLLSSPQYGTLKELTNALLRDQKLELAKNMWSCITTKGGELNVSAWTI 540

Query: 541  WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMA 600
            WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMA
Sbjct: 541  WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMA 600

Query: 601  ADRNITFKMYKRRGERDLKEKIKAKVDGRKRRAPDISYRCILLVRKLHVGSLWSKTCHKE 660
            ADRNITFKMYKRRGERDLKEKIKAKVDGRKRRAPDISYRCILLVRKLHVGSLWSKTCHKE
Sbjct: 601  ADRNITFKMYKRRGERDLKEKIKAKVDGRKRRAPDISYRCILLVRKLHVGSLWSKTCHKE 660

Query: 661  KGTKIKILLCGTELYVLYPVKGSIAGQNKIKQSIFRRGASEASYKALKFSETGKRRRAVL 720
            KGTKIKILLCGTELYVLYPVKGSIAGQNKIKQSIFRRGASEASYKALKFSETGKRRRAVL
Sbjct: 661  KGTKIKILLCGTELYVLYPVKGSIAGQNKIKQSIFRRGASEASYKALKFSETGKRRRAVL 720

Query: 721  CCAVLCYACSCFGSVWMSSRPRGRKEELKAWPCGFGWAERQPTSTRRNGSFPFAGALNAK 780
            CCAVLCYACSCFGSVWMSSRPRGRKEELKAWPCGFGWAERQPTSTRRNGSFPFAGALNAK
Sbjct: 721  CCAVLCYACSCFGSVWMSSRPRGRKEELKAWPCGFGWAERQPTSTRRNGSFPFAGALNAK 780

Query: 781  SKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIVSKIEGDFSCTLELLKAVPILKKAY 840
            SKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIVSKIEGDFSCTLELLKAVPILKKAY
Sbjct: 781  SKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIVSKIEGDFSCTLELLKAVPILKKAY 840

Query: 841  GDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYEIEDVDENCKSLVNKGIVRVADIKF 900
            GDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYEIEDVDENCKSLVNKGIVRVADIKF
Sbjct: 841  GDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYEIEDVDENCKSLVNKGIVRVADIKF 900

Query: 901  PLPYRAKSFSYVIVSDAMDYLSPKYLNKTLPEFARVSSDGLVIFSGSPGQQKAKVNELTK 960
            PLPYRAKSFSYVIVSDAMDYLSPKYLNKTLPEFARVSSDGLVIFSGSPGQQKAKVNELTK
Sbjct: 901  PLPYRAKSFSYVIVSDAMDYLSPKYLNKTLPEFARVSSDGLVIFSGSPGQQKAKVNELTK 960

Query: 961  FGRPAKMRSSSWWIRFFTQTSLEENEGAAKNFKQAASKQSYKPGCQVFHLNSYH 1014
            FGRPAKMRSSSWWIRFFTQTSLEENEGAAKNFKQAASKQSYKPGCQVFHLNSYH
Sbjct: 961  FGRPAKMRSSSWWIRFFTQTSLEENEGAAKNFKQAASKQSYKPGCQVFHLNSYH 1014

[Close]

BLAST of Csor.00g058600 vs. NCBI nr
Match: XP_022950461.1 (putative pentatricopeptide repeat-containing protein At5g65820 [Cucurbita moschata])

HSP 1 Score: 1287 bits (3330), Expect = 0.0
Identity = 631/633 (99.68%), Postives = 633/633 (100.00%), Query Frame = 0


Query: 1   MHRFYRRTISLFNNPPSALLLTKSNTPLTFFLRKPHLSLSLSPVSSHTNPNGTTETGGFG 60
           MHRFYRRTISLFNNPPSALLLTKSNTPLTFFLRKPHLSLSLSP+SSHTNPNGTTETGGFG
Sbjct: 1   MHRFYRRTISLFNNPPSALLLTKSNTPLTFFLRKPHLSLSLSPISSHTNPNGTTETGGFG 60

Query: 61  PIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERV 120
           PIHLKTTPHDSTNDRDADEFSADVEK+YRILRKFHTRVPKLELALQESGVVLRSGLPERV
Sbjct: 61  PIHLKTTPHDSTNDRDADEFSADVEKMYRILRKFHTRVPKLELALQESGVVLRSGLPERV 120

Query: 121 LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRRENPY 180
           LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRRENPY
Sbjct: 121 LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRRENPY 180

Query: 181 MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240
           MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS
Sbjct: 181 MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240

Query: 241 LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300
           LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ
Sbjct: 241 LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300

Query: 301 AGKMRDAFHLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT 360
           AGKMRDAFHLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT
Sbjct: 301 AGKMRDAFHLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT 360

Query: 361 YTTLISGFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR 420
           YTTLISGFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR
Sbjct: 361 YTTLISGFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR 420

Query: 421 KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI 480
           KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI
Sbjct: 421 KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI 480

Query: 481 EACDYFKDMVERGLLSSPQYGTLKELTNALLRDQKLELAKNMWSCITTKGGELNVSAWTI 540
           EACDYFKDMVERGLLSSPQYGTLKELTNALLRDQKLELAKNMWSCITTKGGELNVSAWTI
Sbjct: 481 EACDYFKDMVERGLLSSPQYGTLKELTNALLRDQKLELAKNMWSCITTKGGELNVSAWTI 540

Query: 541 WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMA 600
           WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMA
Sbjct: 541 WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMA 600

Query: 601 ADRNITFKMYKRRGERDLKEKIKAKVDGRKRRA 633
           ADRNITFKMYKRRGERDLKEKIKAKVDGRKRRA
Sbjct: 601 ADRNITFKMYKRRGERDLKEKIKAKVDGRKRRA 633

[Close]

BLAST of Csor.00g058600 vs. NCBI nr
Match: XP_023544375.1 (putative pentatricopeptide repeat-containing protein At5g65820 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1282 bits (3318), Expect = 0.0
Identity = 628/633 (99.21%), Postives = 631/633 (99.68%), Query Frame = 0


Query: 1   MHRFYRRTISLFNNPPSALLLTKSNTPLTFFLRKPHLSLSLSPVSSHTNPNGTTETGGFG 60
           MHRFYRRTISLFNNPPSALLLTKSNTPLTFFLRKPHLSLSLSP+SSHTNPNGTTETGGFG
Sbjct: 1   MHRFYRRTISLFNNPPSALLLTKSNTPLTFFLRKPHLSLSLSPISSHTNPNGTTETGGFG 60

Query: 61  PIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERV 120
           PIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERV
Sbjct: 61  PIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERV 120

Query: 121 LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRRENPY 180
           LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRRENPY
Sbjct: 121 LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRRENPY 180

Query: 181 MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240
           MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDA+CKNGSVKEAAS
Sbjct: 181 MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDAMCKNGSVKEAAS 240

Query: 241 LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300
           LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ
Sbjct: 241 LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300

Query: 301 AGKMRDAFHLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT 360
           AGKMRDAFHLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT
Sbjct: 301 AGKMRDAFHLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT 360

Query: 361 YTTLISGFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR 420
           YTTLISGFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR
Sbjct: 361 YTTLISGFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR 420

Query: 421 KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI 480
           KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI
Sbjct: 421 KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI 480

Query: 481 EACDYFKDMVERGLLSSPQYGTLKELTNALLRDQKLELAKNMWSCITTKGGELNVSAWTI 540
           EACDYFKDMVERGLLS+PQYGTLKELTN LLRDQKLELAKNMWSCITTKGGELNVSAWTI
Sbjct: 481 EACDYFKDMVERGLLSAPQYGTLKELTNGLLRDQKLELAKNMWSCITTKGGELNVSAWTI 540

Query: 541 WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMA 600
           WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMA
Sbjct: 541 WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMA 600

Query: 601 ADRNITFKMYKRRGERDLKEKIKAKVDGRKRRA 633
           ADRNITFKMYKRRGERDLKEKIKAK DGRKRRA
Sbjct: 601 ADRNITFKMYKRRGERDLKEKIKAKEDGRKRRA 633

[Close]

BLAST of Csor.00g058600 vs. NCBI nr
Match: XP_022977892.1 (putative pentatricopeptide repeat-containing protein At5g65820 [Cucurbita maxima])

HSP 1 Score: 1268 bits (3282), Expect = 0.0
Identity = 625/633 (98.74%), Postives = 629/633 (99.37%), Query Frame = 0


Query: 1   MHRFYRRTISLFNNPPSALLLTKSNTPLTFFLRKPHLSLSLSPVSSHTNPNGTTETGGFG 60
           MHRFYRRTISLFNNPPSALLLTKSN+PLTFFLRKPHLSLSLS +SSHTNPN TTETGGFG
Sbjct: 1   MHRFYRRTISLFNNPPSALLLTKSNSPLTFFLRKPHLSLSLSLISSHTNPNCTTETGGFG 60

Query: 61  PIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERV 120
           PIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERV
Sbjct: 61  PIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERV 120

Query: 121 LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRRENPY 180
           LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMR+ENPY
Sbjct: 121 LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRKENPY 180

Query: 181 MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240
           MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS
Sbjct: 181 MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240

Query: 241 LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300
           LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ
Sbjct: 241 LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300

Query: 301 AGKMRDAFHLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT 360
           AGKMRDAF LLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT
Sbjct: 301 AGKMRDAFDLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT 360

Query: 361 YTTLISGFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR 420
           YTTLISGFCK GNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR
Sbjct: 361 YTTLISGFCKCGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR 420

Query: 421 KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI 480
           KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI
Sbjct: 421 KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI 480

Query: 481 EACDYFKDMVERGLLSSPQYGTLKELTNALLRDQKLELAKNMWSCITTKGGELNVSAWTI 540
           EACDYFKDMVERGLLS+PQYGTLKELTNALLRDQKLELAKNMWSCITTKGGELNVSAWTI
Sbjct: 481 EACDYFKDMVERGLLSAPQYGTLKELTNALLRDQKLELAKNMWSCITTKGGELNVSAWTI 540

Query: 541 WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMA 600
           WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMA
Sbjct: 541 WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMA 600

Query: 601 ADRNITFKMYKRRGERDLKEKIKAKVDGRKRRA 633
           ADRNITFKMYKRRGERDLKEKIKAKVDGRKRRA
Sbjct: 601 ADRNITFKMYKRRGERDLKEKIKAKVDGRKRRA 633

[Close]

BLAST of Csor.00g058600 vs. NCBI nr
Match: KAG7034267.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1223 bits (3164), Expect = 0.0
Identity = 599/600 (99.83%), Postives = 600/600 (100.00%), Query Frame = 0


Query: 34  KPHLSLSLSPVSSHTNPNGTTETGGFGPIHLKTTPHDSTNDRDADEFSADVEKVYRILRK 93
           KPHLSLSLSP+SSHTNPNGTTETGGFGPIHLKTTPHDSTNDRDADEFSADVEKVYRILRK
Sbjct: 83  KPHLSLSLSPISSHTNPNGTTETGGFGPIHLKTTPHDSTNDRDADEFSADVEKVYRILRK 142

Query: 94  FHTRVPKLELALQESGVVLRSGLPERVLSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRA 153
           FHTRVPKLELALQESGVVLRSGLPERVLSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRA
Sbjct: 143 FHTRVPKLELALQESGVVLRSGLPERVLSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRA 202

Query: 154 MIKTLGKMRQFGAVWALIEEMRRENPYMLTPEVFIVLMRRFASARMVKKAVEVLDEMPKY 213
           MIKTLGKMRQFGAVWALIEEMRRENPYMLTPEVFIVLMRRFASARMVKKAVEVLDEMPKY
Sbjct: 203 MIKTLGKMRQFGAVWALIEEMRRENPYMLTPEVFIVLMRRFASARMVKKAVEVLDEMPKY 262

Query: 214 GCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRIRFNPTLRHFTSLLYGWCREGKILEAK 273
           GCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRIRFNPTLRHFTSLLYGWCREGKILEAK
Sbjct: 263 GCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRIRFNPTLRHFTSLLYGWCREGKILEAK 322

Query: 274 HVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFHLLEQMKKVNCGPNAASYTILIQAF 333
           HVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFHLLEQMKKVNCGPNAASYTILIQAF
Sbjct: 323 HVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFHLLEQMKKVNCGPNAASYTILIQAF 382

Query: 334 CKMEKMDEAMRILVEMQGRGCEADVVTYTTLISGFCKWGNTDRAYEILDNMIQKGHDPSQ 393
           CKMEKMDEAMRILVEMQGRGCEADVVTYTTLISGFCKWGNTDRAYEILDNMIQKGHDPSQ
Sbjct: 383 CKMEKMDEAMRILVEMQGRGCEADVVTYTTLISGFCKWGNTDRAYEILDNMIQKGHDPSQ 442

Query: 394 LSYLCIMMAHEKKEQLEECMELMEEMRKIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGE 453
           LSYLCIMMAHEKKEQLEECMELMEEMRKIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGE
Sbjct: 443 LSYLCIMMAHEKKEQLEECMELMEEMRKIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGE 502

Query: 454 MEAGGLNPGLDTYIVMVHGFLSQGCLIEACDYFKDMVERGLLSSPQYGTLKELTNALLRD 513
           MEAGGLNPGLDTYIVMVHGFLSQGCLIEACDYFKDMVERGLLSSPQYGTLKELTNALLRD
Sbjct: 503 MEAGGLNPGLDTYIVMVHGFLSQGCLIEACDYFKDMVERGLLSSPQYGTLKELTNALLRD 562

Query: 514 QKLELAKNMWSCITTKGGELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTF 573
           QKLELAKNMWSCITTKGGELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTF
Sbjct: 563 QKLELAKNMWSCITTKGGELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTF 622

Query: 574 AKLMRGLKKLYNRQLAVEITDKVRKMAADRNITFKMYKRRGERDLKEKIKAKVDGRKRRA 633
           AKLMRGLKKLYNRQLAVEITDKVRKMAADRNITFKMYKRRGERDLKEKIKAKVDGRKRRA
Sbjct: 623 AKLMRGLKKLYNRQLAVEITDKVRKMAADRNITFKMYKRRGERDLKEKIKAKVDGRKRRA 682

[Close]

BLAST of Csor.00g058600 vs. ExPASy TrEMBL
Match: A0A6J1GEW3 (putative pentatricopeptide repeat-containing protein At5g65820 OS=Cucurbita moschata OX=3662 GN=LOC111453556 PE=4 SV=1)

HSP 1 Score: 1287 bits (3330), Expect = 0.0
Identity = 631/633 (99.68%), Postives = 633/633 (100.00%), Query Frame = 0


Query: 1   MHRFYRRTISLFNNPPSALLLTKSNTPLTFFLRKPHLSLSLSPVSSHTNPNGTTETGGFG 60
           MHRFYRRTISLFNNPPSALLLTKSNTPLTFFLRKPHLSLSLSP+SSHTNPNGTTETGGFG
Sbjct: 1   MHRFYRRTISLFNNPPSALLLTKSNTPLTFFLRKPHLSLSLSPISSHTNPNGTTETGGFG 60

Query: 61  PIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERV 120
           PIHLKTTPHDSTNDRDADEFSADVEK+YRILRKFHTRVPKLELALQESGVVLRSGLPERV
Sbjct: 61  PIHLKTTPHDSTNDRDADEFSADVEKMYRILRKFHTRVPKLELALQESGVVLRSGLPERV 120

Query: 121 LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRRENPY 180
           LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRRENPY
Sbjct: 121 LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRRENPY 180

Query: 181 MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240
           MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS
Sbjct: 181 MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240

Query: 241 LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300
           LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ
Sbjct: 241 LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300

Query: 301 AGKMRDAFHLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT 360
           AGKMRDAFHLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT
Sbjct: 301 AGKMRDAFHLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT 360

Query: 361 YTTLISGFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR 420
           YTTLISGFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR
Sbjct: 361 YTTLISGFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR 420

Query: 421 KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI 480
           KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI
Sbjct: 421 KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI 480

Query: 481 EACDYFKDMVERGLLSSPQYGTLKELTNALLRDQKLELAKNMWSCITTKGGELNVSAWTI 540
           EACDYFKDMVERGLLSSPQYGTLKELTNALLRDQKLELAKNMWSCITTKGGELNVSAWTI
Sbjct: 481 EACDYFKDMVERGLLSSPQYGTLKELTNALLRDQKLELAKNMWSCITTKGGELNVSAWTI 540

Query: 541 WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMA 600
           WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMA
Sbjct: 541 WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMA 600

Query: 601 ADRNITFKMYKRRGERDLKEKIKAKVDGRKRRA 633
           ADRNITFKMYKRRGERDLKEKIKAKVDGRKRRA
Sbjct: 601 ADRNITFKMYKRRGERDLKEKIKAKVDGRKRRA 633

[Close]

BLAST of Csor.00g058600 vs. ExPASy TrEMBL
Match: A0A6J1IJP9 (putative pentatricopeptide repeat-containing protein At5g65820 OS=Cucurbita maxima OX=3661 GN=LOC111478047 PE=4 SV=1)

HSP 1 Score: 1268 bits (3282), Expect = 0.0
Identity = 625/633 (98.74%), Postives = 629/633 (99.37%), Query Frame = 0


Query: 1   MHRFYRRTISLFNNPPSALLLTKSNTPLTFFLRKPHLSLSLSPVSSHTNPNGTTETGGFG 60
           MHRFYRRTISLFNNPPSALLLTKSN+PLTFFLRKPHLSLSLS +SSHTNPN TTETGGFG
Sbjct: 1   MHRFYRRTISLFNNPPSALLLTKSNSPLTFFLRKPHLSLSLSLISSHTNPNCTTETGGFG 60

Query: 61  PIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERV 120
           PIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERV
Sbjct: 61  PIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERV 120

Query: 121 LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRRENPY 180
           LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMR+ENPY
Sbjct: 121 LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRKENPY 180

Query: 181 MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240
           MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS
Sbjct: 181 MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240

Query: 241 LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300
           LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ
Sbjct: 241 LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300

Query: 301 AGKMRDAFHLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT 360
           AGKMRDAF LLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT
Sbjct: 301 AGKMRDAFDLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT 360

Query: 361 YTTLISGFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR 420
           YTTLISGFCK GNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR
Sbjct: 361 YTTLISGFCKCGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR 420

Query: 421 KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI 480
           KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI
Sbjct: 421 KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI 480

Query: 481 EACDYFKDMVERGLLSSPQYGTLKELTNALLRDQKLELAKNMWSCITTKGGELNVSAWTI 540
           EACDYFKDMVERGLLS+PQYGTLKELTNALLRDQKLELAKNMWSCITTKGGELNVSAWTI
Sbjct: 481 EACDYFKDMVERGLLSAPQYGTLKELTNALLRDQKLELAKNMWSCITTKGGELNVSAWTI 540

Query: 541 WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMA 600
           WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMA
Sbjct: 541 WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMA 600

Query: 601 ADRNITFKMYKRRGERDLKEKIKAKVDGRKRRA 633
           ADRNITFKMYKRRGERDLKEKIKAKVDGRKRRA
Sbjct: 601 ADRNITFKMYKRRGERDLKEKIKAKVDGRKRRA 633

[Close]

BLAST of Csor.00g058600 vs. ExPASy TrEMBL
Match: A0A0A0KPG0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G011710 PE=4 SV=1)

HSP 1 Score: 1167 bits (3018), Expect = 0.0
Identity = 566/633 (89.42%), Postives = 603/633 (95.26%), Query Frame = 0


Query: 1   MHRFYRRTISLFNNPPSALLLTKSNTPLTFFLRKPHLSLSLSPVSSHTNPNGTTETGGFG 60
           MHRFY RTI +F+   S     KSN+PL F  +KPHLSLSL  +SS T+PNGTT+ GGFG
Sbjct: 1   MHRFYHRTIHVFSKQSS-----KSNSPLIFLPKKPHLSLSL--ISSQTSPNGTTQRGGFG 60

Query: 61  PIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERV 120
           PIHLKTTPH+S +DRDADEFS DVEKVYRILRKFHTRVPKLELALQESGV++RSGLPERV
Sbjct: 61  PIHLKTTPHESAHDRDADEFSVDVEKVYRILRKFHTRVPKLELALQESGVIMRSGLPERV 120

Query: 121 LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRRENPY 180
           LSRCGDAGNLGYRFFVWASKQPGYRHSYEVY+AMIKTLGKMRQFGAVWALIEEMR+ENPY
Sbjct: 121 LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPY 180

Query: 181 MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240
           MLTPEVFIVLMRRFAS RMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS
Sbjct: 181 MLTPEVFIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240

Query: 241 LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300
           LFEDMR+RFNP LRHFTSLLYGWCREGKI+EAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ
Sbjct: 241 LFEDMRVRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300

Query: 301 AGKMRDAFHLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT 360
           AGKMRDAF LL +MKKVNCGPNAAS+TILIQ+FCK EKMDEAMRI  EMQG GCEADVVT
Sbjct: 301 AGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVT 360

Query: 361 YTTLISGFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR 420
           YTTLISGFCKWGNTD+AYEILD+MIQKGHDPSQLSYLCIMMAHEKKE+LEECMEL+EEMR
Sbjct: 361 YTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMR 420

Query: 421 KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI 480
           KIGC+PDLNIYNT+IRLVCKLG+LKEAVRLWGEM+AGGLNPGLDTYI+MVHGFLSQGCL+
Sbjct: 421 KIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLV 480

Query: 481 EACDYFKDMVERGLLSSPQYGTLKELTNALLRDQKLELAKNMWSCITTKGGELNVSAWTI 540
           EACDYFK+MVERGLLS+PQYGTLKELTNALLR +KLE+AKNMWSC+TTKG ELNVSAWTI
Sbjct: 481 EACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELNVSAWTI 540

Query: 541 WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMA 600
           WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKL++RQLAVEIT+KVRKMA
Sbjct: 541 WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLFHRQLAVEITEKVRKMA 600

Query: 601 ADRNITFKMYKRRGERDLKEKIKAKVDGRKRRA 633
           ADR ITFKMYKRRGERDLKEKIKAK+DGRKRRA
Sbjct: 601 ADRQITFKMYKRRGERDLKEKIKAKIDGRKRRA 626

[Close]

BLAST of Csor.00g058600 vs. ExPASy TrEMBL
Match: A0A5A7VI13 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00860 PE=4 SV=1)

HSP 1 Score: 1164 bits (3012), Expect = 0.0
Identity = 568/633 (89.73%), Postives = 602/633 (95.10%), Query Frame = 0


Query: 1   MHRFYRRTISLFNNPPSALLLTKSNTPLTFFLRKPHLSLSLSPVSSHTNPNGTTETGGFG 60
           MHRFY RTI +F+   S     KSN+PL F  +KPHLSLSL  +SS T+PNGT + G FG
Sbjct: 1   MHRFYHRTIHVFSKQSS-----KSNSPLIFLPKKPHLSLSL--ISSQTSPNGTPQRGWFG 60

Query: 61  PIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERV 120
           PIHLKTTPH+ST+D DADEFS DVEKVYRILRKFHTRVPKLELALQESGV+LRSGLPERV
Sbjct: 61  PIHLKTTPHESTHDIDADEFSVDVEKVYRILRKFHTRVPKLELALQESGVILRSGLPERV 120

Query: 121 LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRRENPY 180
           LSRCGDAGNLGYRFFVWASKQPGY+HSYEVY+AMIKTLGKMRQFGAVWALIEEMR+ENPY
Sbjct: 121 LSRCGDAGNLGYRFFVWASKQPGYKHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPY 180

Query: 181 MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240
           MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS
Sbjct: 181 MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240

Query: 241 LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300
           LFEDMR+RFNP+LRHFTSLLYGWCREGKI+EAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ
Sbjct: 241 LFEDMRVRFNPSLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300

Query: 301 AGKMRDAFHLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT 360
           AGKMRDAF LL +MKKVNCGPNAAS+TILIQAFCKMEKMDEAMRI  EMQG GCEADVVT
Sbjct: 301 AGKMRDAFDLLAEMKKVNCGPNAASFTILIQAFCKMEKMDEAMRIFTEMQGSGCEADVVT 360

Query: 361 YTTLISGFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR 420
           YTTLISGFCKWGNTDRAYEILD+MIQKGHDPSQ SYLCIMMAHEKKE+LEECMEL+EEMR
Sbjct: 361 YTTLISGFCKWGNTDRAYEILDDMIQKGHDPSQSSYLCIMMAHEKKEELEECMELIEEMR 420

Query: 421 KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI 480
           KIGCLPDLNIYNT+IRLVCKLG+LKEAVRLWGEMEAGGLNPGLDTYI+MVHGFLSQGCL+
Sbjct: 421 KIGCLPDLNIYNTMIRLVCKLGDLKEAVRLWGEMEAGGLNPGLDTYILMVHGFLSQGCLV 480

Query: 481 EACDYFKDMVERGLLSSPQYGTLKELTNALLRDQKLELAKNMWSCITTKGGELNVSAWTI 540
           EACDYFK+MVERGLLS+PQYGTLKELTNALLR +KLE+AKNMWSCITTKG ELNV+AWTI
Sbjct: 481 EACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCITTKGCELNVNAWTI 540

Query: 541 WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMA 600
           WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKL++RQLAVEIT+KVRKMA
Sbjct: 541 WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLFHRQLAVEITEKVRKMA 600

Query: 601 ADRNITFKMYKRRGERDLKEKIKAKVDGRKRRA 633
           ADR ITFKMYKRRGERDLKEK KAK+DGRKRRA
Sbjct: 601 ADRQITFKMYKRRGERDLKEKTKAKIDGRKRRA 626

[Close]

BLAST of Csor.00g058600 vs. ExPASy TrEMBL
Match: A0A1S3CMX3 (pentatricopeptide repeat-containing protein At3g49730-like OS=Cucumis melo OX=3656 GN=LOC103502772 PE=4 SV=1)

HSP 1 Score: 1164 bits (3012), Expect = 0.0
Identity = 568/633 (89.73%), Postives = 602/633 (95.10%), Query Frame = 0


Query: 1   MHRFYRRTISLFNNPPSALLLTKSNTPLTFFLRKPHLSLSLSPVSSHTNPNGTTETGGFG 60
           MHRFY RTI +F+   S     KSN+PL F  +KPHLSLSL  +SS T+PNGT + G FG
Sbjct: 1   MHRFYHRTIHVFSKQSS-----KSNSPLIFLPKKPHLSLSL--ISSQTSPNGTPQRGWFG 60

Query: 61  PIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERV 120
           PIHLKTTPH+ST+D DADEFS DVEKVYRILRKFHTRVPKLELALQESGV+LRSGLPERV
Sbjct: 61  PIHLKTTPHESTHDIDADEFSVDVEKVYRILRKFHTRVPKLELALQESGVILRSGLPERV 120

Query: 121 LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRRENPY 180
           LSRCGDAGNLGYRFFVWASKQPGY+HSYEVY+AMIKTLGKMRQFGAVWALIEEMR+ENPY
Sbjct: 121 LSRCGDAGNLGYRFFVWASKQPGYKHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPY 180

Query: 181 MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240
           MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS
Sbjct: 181 MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240

Query: 241 LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300
           LFEDMR+RFNP+LRHFTSLLYGWCREGKI+EAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ
Sbjct: 241 LFEDMRVRFNPSLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300

Query: 301 AGKMRDAFHLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT 360
           AGKMRDAF LL +MKKVNCGPNAAS+TILIQAFCKMEKMDEAMRI  EMQG GCEADVVT
Sbjct: 301 AGKMRDAFDLLAEMKKVNCGPNAASFTILIQAFCKMEKMDEAMRIFTEMQGSGCEADVVT 360

Query: 361 YTTLISGFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR 420
           YTTLISGFCKWGNTDRAYEILD+MIQKGHDPSQ SYLCIMMAHEKKE+LEECMEL+EEMR
Sbjct: 361 YTTLISGFCKWGNTDRAYEILDDMIQKGHDPSQSSYLCIMMAHEKKEELEECMELIEEMR 420

Query: 421 KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI 480
           KIGCLPDLNIYNT+IRLVCKLG+LKEAVRLWGEMEAGGLNPGLDTYI+MVHGFLSQGCL+
Sbjct: 421 KIGCLPDLNIYNTMIRLVCKLGDLKEAVRLWGEMEAGGLNPGLDTYILMVHGFLSQGCLV 480

Query: 481 EACDYFKDMVERGLLSSPQYGTLKELTNALLRDQKLELAKNMWSCITTKGGELNVSAWTI 540
           EACDYFK+MVERGLLS+PQYGTLKELTNALLR +KLE+AKNMWSCITTKG ELNV+AWTI
Sbjct: 481 EACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCITTKGCELNVNAWTI 540

Query: 541 WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMA 600
           WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKL++RQLAVEIT+KVRKMA
Sbjct: 541 WIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLFHRQLAVEITEKVRKMA 600

Query: 601 ADRNITFKMYKRRGERDLKEKIKAKVDGRKRRA 633
           ADR ITFKMYKRRGERDLKEK KAK+DGRKRRA
Sbjct: 601 ADRQITFKMYKRRGERDLKEKTKAKIDGRKRRA 626

[Close]

BLAST of Csor.00g058600 vs. TAIR 10
Match: AT3G49730.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 820.5 bits (2118), Expect = 1.5e-237
Identity = 392/571 (68.65%), Postives = 474/571 (83.01%), Query Frame = 0


Query: 74  DRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERVLSRCGDAGNLGYR 133
           ++  DEF+ +VEK+YRILR  H+RVPKLELAL ESG+ LR GL  RVLSRCGDAGNLGYR
Sbjct: 57  EKHEDEFAGEVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYR 116

Query: 134 FFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRRENPYMLTPEVFIVLMRR 193
           FF+WA+KQPGY HSYEV ++M+  L KMRQFGAVW LIEEMR+ NP ++ PE+F+VLMRR
Sbjct: 117 FFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRR 176

Query: 194 FASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRIRFNPTL 253
           FASA MVKKAVEVLDEMPKYG EPDEYVFGCLLDALCKNGSVKEA+ +FEDMR +F P L
Sbjct: 177 FASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNL 236

Query: 254 RHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFHLLEQ 313
           R+FTSLLYGWCREGK++EAK VLVQ+KEAG EPDIVV+ NLL GYA AGKM DA+ L+  
Sbjct: 237 RYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMND 296

Query: 314 MKKVNCGPNAASYTILIQAFCKMEK-MDEAMRILVEMQGRGCEADVVTYTTLISGFCKWG 373
           M+K    PN   YT+LIQA C+ EK MDEAMR+ VEM+  GCEAD+VTYT LISGFCKWG
Sbjct: 297 MRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWG 356

Query: 374 NTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMRKIGCLPDLNIYN 433
             D+ Y +LD+M +KG  PSQ++Y+ IM+AHEKKEQ EEC+EL+E+M++ GC PDL IYN
Sbjct: 357 MIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYN 416

Query: 434 TVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLIEACDYFKDMVER 493
            VIRL CKLGE+KEAVRLW EMEA GL+PG+DT+++M++GF SQG LIEAC++FK+MV R
Sbjct: 417 VVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSR 476

Query: 494 GLLSSPQYGTLKELTNALLRDQKLELAKNMWSCITTKGG--ELNVSAWTIWIHALFSNGH 553
           G+ S+PQYGTLK L N L+RD KLE+AK++WSCI+ K    ELNVSAWTIWIHAL++ GH
Sbjct: 477 GIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGH 536

Query: 554 VKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKMAADRNITFKMY 613
           VKEACSYCLDMM+ DLMPQP+T+AKLM+GL KLYNR +A EIT+KV KMA++R ++FKMY
Sbjct: 537 VKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKLYNRTIAAEITEKVVKMASEREMSFKMY 596

Query: 614 KRRGERDLKEKIKAK--VDGRKRRAPDISYR 640
           K++GE DL EK K K   +G+K+      Y+
Sbjct: 597 KKKGEEDLIEKAKPKGNKEGKKKGTDHQRYK 627

[Close]

BLAST of Csor.00g058600 vs. TAIR 10
Match: AT5G65820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 819.3 bits (2115), Expect = 3.4e-237
Identity = 404/635 (63.62%), Postives = 500/635 (78.74%), Query Frame = 0


Query: 1   MHRFYRRTISLFNNPPSALLLTKSNTPLTFFLRKPHLSLSLSPVSSHTNPNGTTETGGFG 60
           MHRF      L +     L  ++  +      R  H+S +L      +N        G G
Sbjct: 8   MHRFSPIVEFLLSKRQIFLHYSQFKSRFDLIHRSFHVSRALEDNFRRSN--------GIG 67

Query: 61  PIHLKTTPHDSTNDRDADEFSADVEKVYRILRKFHTRVPKLELALQESGVVLRSGLPERV 120
            + L+ + +D T +   DEF++DVEK YRILRKFH+RVPKLELAL ESGV LR GL ERV
Sbjct: 68  LVCLEKSHNDRTKNSKYDEFASDVEKSYRILRKFHSRVPKLELALNESGVELRPGLIERV 127

Query: 121 LSRCGDAGNLGYRFFVWASKQPGYRHSYEVYRAMIKTLGKMRQFGAVWALIEEMRRENPY 180
           L+RCGDAGNLGYRFFVWA+KQP Y HS EVY++M+K L KMRQFGAVW LIEEMR+ENP 
Sbjct: 128 LNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQ 187

Query: 181 MLTPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAAS 240
           ++ PE+F+VL++RFASA MVKKA+EVLDEMPK+G EPDEYVFGCLLDALCK+GSVK+AA 
Sbjct: 188 LIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAK 247

Query: 241 LFEDMRIRFNPTLRHFTSLLYGWCREGKILEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQ 300
           LFEDMR+RF   LR+FTSLLYGWCR GK++EAK+VLVQ+ EAGFEPDIV Y NLL GYA 
Sbjct: 248 LFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYAN 307

Query: 301 AGKMRDAFHLLEQMKKVNCGPNAASYTILIQAFCKMEKMDEAMRILVEMQGRGCEADVVT 360
           AGKM DA+ LL  M++    PNA  YT+LIQA CK+++M+EAM++ VEM+   CEADVVT
Sbjct: 308 AGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVT 367

Query: 361 YTTLISGFCKWGNTDRAYEILDNMIQKGHDPSQLSYLCIMMAHEKKEQLEECMELMEEMR 420
           YT L+SGFCKWG  D+ Y +LD+MI+KG  PS+L+Y+ IM+AHEKKE  EEC+ELME+MR
Sbjct: 368 YTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMR 427

Query: 421 KIGCLPDLNIYNTVIRLVCKLGELKEAVRLWGEMEAGGLNPGLDTYIVMVHGFLSQGCLI 480
           +I   PD+ IYN VIRL CKLGE+KEAVRLW EME  GL+PG+DT+++M++G  SQGCL+
Sbjct: 428 QIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLL 487

Query: 481 EACDYFKDMVERGLLSSPQYGTLKELTNALLRDQKLELAKNMWSCITTKGG-ELNVSAWT 540
           EA D+FK+MV RGL S  QYGTLK L N +L+D+KLE+AK++WSCIT+KG  ELNV +WT
Sbjct: 488 EASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWT 547

Query: 541 IWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLYNRQLAVEITDKVRKM 600
           IWIHALFS G+ KEACSYC++M++ D MPQPDTFAKLM+GLKKLYNR+ A EIT+KVR M
Sbjct: 548 IWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNREFAGEITEKVRNM 607

Query: 601 AADRNITFKMYKRRGERDLKEKIKAKVD--GRKRR 633
           AA+R ++FKMYKRRG +DL EK K+K D  G+K++
Sbjct: 608 AAEREMSFKMYKRRGVQDLTEKAKSKQDREGKKKQ 634

[Close]

BLAST of Csor.00g058600 vs. TAIR 10
Match: AT3G49720.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65810.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 391.0 bits (1003), Expect = 3.0e-108
Identity = 191/260 (73.46%), Postives = 220/260 (84.62%), Query Frame = 0


Query: 758  AERQPTSTRR---NGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNK 817
            A RQ  STRR    GSFPFAGAL++KS+SSPLLSICLVLVGA LL+ YA+SGPG F   K
Sbjct: 2    ARRQVGSTRRVGDGGSFPFAGALHSKSRSSPLLSICLVLVGACLLIGYAYSGPGIFKSIK 61

Query: 818  IVSKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEP 877
             VSK+ GD+SCT E+ +A+P+LKKAYGD M KVLHVGPDTCSVVS LLKE ETEAWG+EP
Sbjct: 62   EVSKVTGDYSCTAEVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSSLLKEEETEAWGVEP 121

Query: 878  YEIEDVDENCKSLVNKGIVRVADIKFPLPYRAKSFSYVIVSDAMDYLSPKYLNKTLPEFA 937
            Y+IED D +CKS V+KG+VRVADIKFPLPYRAKSFS VIVSDA+DYLSPKYLNKT+PE A
Sbjct: 122  YDIEDADSHCKSFVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPELA 181

Query: 938  RVSSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKNFKQ 997
            RV+SDG+V+F+G PGQQ+AKV EL+KFGRPAKMRS+SWW RFF QT+LEEN+  +K F+Q
Sbjct: 182  RVASDGVVLFAGLPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSKKFEQ 241

Query: 998  AASKQSYKPGCQVFHLNSYH 1015
            A SK  YKP CQVFHL   H
Sbjct: 242  AVSKGLYKPACQVFHLKPLH 261

[Close]

BLAST of Csor.00g058600 vs. TAIR 10
Match: AT3G49720.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65810.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 391.0 bits (1003), Expect = 3.0e-108
Identity = 191/260 (73.46%), Postives = 220/260 (84.62%), Query Frame = 0


Query: 758  AERQPTSTRR---NGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNK 817
            A RQ  STRR    GSFPFAGAL++KS+SSPLLSICLVLVGA LL+ YA+SGPG F   K
Sbjct: 2    ARRQVGSTRRVGDGGSFPFAGALHSKSRSSPLLSICLVLVGACLLIGYAYSGPGIFKSIK 61

Query: 818  IVSKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEP 877
             VSK+ GD+SCT E+ +A+P+LKKAYGD M KVLHVGPDTCSVVS LLKE ETEAWG+EP
Sbjct: 62   EVSKVTGDYSCTAEVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSSLLKEEETEAWGVEP 121

Query: 878  YEIEDVDENCKSLVNKGIVRVADIKFPLPYRAKSFSYVIVSDAMDYLSPKYLNKTLPEFA 937
            Y+IED D +CKS V+KG+VRVADIKFPLPYRAKSFS VIVSDA+DYLSPKYLNKT+PE A
Sbjct: 122  YDIEDADSHCKSFVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPELA 181

Query: 938  RVSSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKNFKQ 997
            RV+SDG+V+F+G PGQQ+AKV EL+KFGRPAKMRS+SWW RFF QT+LEEN+  +K F+Q
Sbjct: 182  RVASDGVVLFAGLPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSKKFEQ 241

Query: 998  AASKQSYKPGCQVFHLNSYH 1015
            A SK  YKP CQVFHL   H
Sbjct: 242  AVSKGLYKPACQVFHLKPLH 261

[Close]

BLAST of Csor.00g058600 vs. TAIR 10
Match: AT5G65810.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49720.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 390.6 bits (1002), Expect = 3.9e-108
Identity = 186/257 (72.37%), Postives = 220/257 (85.60%), Query Frame = 0


Query: 758  AERQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIVS 817
            + RQ      +GSFPF GAL++KS+SSPLLS+CLVLVGA LL+ YA+SGPG F   + VS
Sbjct: 2    SRRQVRRVGDSGSFPFVGALHSKSRSSPLLSVCLVLVGACLLIGYAYSGPGMFKSIREVS 61

Query: 818  KIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYEI 877
            KI GD+SCT E+ +A+PILK AYGDSM KVLHVGP+TCSVVS LL E ETEAWG+EPY++
Sbjct: 62   KITGDYSCTAEVQRAIPILKSAYGDSMRKVLHVGPETCSVVSSLLNEEETEAWGVEPYDV 121

Query: 878  EDVDENCKSLVNKGIVRVADIKFPLPYRAKSFSYVIVSDAMDYLSPKYLNKTLPEFARVS 937
            ED D NCKSL++KG+VRVADIKFPLPYR+KSFS VIVSDA+DYLSP+YLNKT+PE ARV+
Sbjct: 122  EDADSNCKSLLHKGLVRVADIKFPLPYRSKSFSLVIVSDALDYLSPRYLNKTVPELARVA 181

Query: 938  SDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKNFKQAAS 997
            SDG+V+ +G+PGQQKAK  EL+KFGRPAKMRSSSWWIRFF+QT+LEENE A+K F+QAAS
Sbjct: 182  SDGVVLLAGNPGQQKAKGGELSKFGRPAKMRSSSWWIRFFSQTNLEENEAASKKFEQAAS 241

Query: 998  KQSYKPGCQVFHLNSYH 1015
            K SYKP CQVFHL   H
Sbjct: 242  KSSYKPACQVFHLKPLH 258

The following BLAST results are available for this feature:

BLAST of Csor.00g058600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C8A0	2.1e-236	68.65	Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX...	[more]
Q9FH87	4.8e-236	63.62	Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th...	[more]
Q9M2Y6	4.2e-107	73.46	Probable pectin methylesterase CGR2 OS=Arabidopsis thaliana OX=3702 GN=CGR2 PE=2...	[more]
Q0WPN7	5.5e-107	72.37	Probable pectin methylesterase CGR3 OS=Arabidopsis thaliana OX=3702 GN=CGR3 PE=2...	[more]
Q9FVX2	3.3e-67	32.20	Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidop...	[more]

BLAST of Csor.00g058600 vs. NCBI nr


Match Name	Identity	Description
KAG6604102.1	100.00	putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros...	[more]
XP_022950461.1	99.68	putative pentatricopeptide repeat-containing protein At5g65820 [Cucurbita moscha...	[more]
XP_023544375.1	99.21	putative pentatricopeptide repeat-containing protein At5g65820 [Cucurbita pepo s...	[more]
XP_022977892.1	98.74	putative pentatricopeptide repeat-containing protein At5g65820 [Cucurbita maxima...	[more]
KAG7034267.1	99.83	putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros...	[more]

BLAST of Csor.00g058600 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1GEW3	99.68	putative pentatricopeptide repeat-containing protein At5g65820 OS=Cucurbita mosc...	[more]
A0A6J1IJP9	98.74	putative pentatricopeptide repeat-containing protein At5g65820 OS=Cucurbita maxi...	[more]
A0A0A0KPG0	89.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G011710 PE=4 SV=1	[more]
A0A5A7VI13	89.73	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CMX3	89.73	pentatricopeptide repeat-containing protein At3g49730-like OS=Cucumis melo OX=36...	[more]

BLAST of Csor.00g058600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49730.1	1.5e-237	68.65	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G65820.1	3.4e-237	63.62	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G49720.1	3.0e-108	73.46	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G49720.2	3.0e-108	73.46	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G65810.1	3.9e-108	72.37	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 402..422
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 826..1003 e-value: 6.0E-7 score: 31.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..61
None	No IPR available	PANTHER	PTHR47933:SF9	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 51..634
None	No IPR available	PANTHER	PTHR47933	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL	coord: 51..634
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 248..315 e-value: 1.2E-15 score: 59.5 coord: 316..385 e-value: 3.3E-24 score: 87.4 coord: 118..247 e-value: 3.1E-27 score: 97.3 coord: 386..457 e-value: 2.5E-13 score: 51.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 496..637 e-value: 1.0E-10 score: 43.5
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 229..450
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 430..461 e-value: 4.9E-6 score: 24.4 coord: 359..392 e-value: 2.5E-9 score: 34.8 coord: 220..246 e-value: 1.6E-5 score: 22.8 coord: 289..323 e-value: 3.5E-7 score: 28.0 coord: 187..219 e-value: 1.5E-6 score: 26.0 coord: 465..494 e-value: 1.2E-4 score: 20.0 coord: 537..567 e-value: 0.0012 score: 16.8 coord: 256..288 e-value: 6.3E-5 score: 20.9 coord: 325..358 e-value: 5.2E-8 score: 30.6
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 352..384 e-value: 4.2E-13 score: 48.8 coord: 214..246 e-value: 1.3E-9 score: 37.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 286..335 e-value: 1.7E-16 score: 60.1 coord: 426..473 e-value: 1.5E-9 score: 37.9
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 255..284 e-value: 0.052 score: 13.8 coord: 395..424 e-value: 0.011 score: 15.9 coord: 537..563 e-value: 0.065 score: 13.5 coord: 150..178 e-value: 1.3 score: 9.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 287..321 score: 12.254791
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 462..496 score: 8.823904
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 183..217 score: 10.150222
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 392..426 score: 9.273317
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 322..356 score: 12.046526
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 252..286 score: 10.029647
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 218..248 score: 9.909073
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 427..461 score: 11.91499
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 357..391 score: 13.383805

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g058600.m01	Csor.00g058600.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding