Csor.00g058120 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g058120
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	lysine-rich arabinogalactan protein 18-like
Location	Csor_Chr03: 7252642 .. 7255285 (+)
RNA-Seq Expression	Csor.00g058120
Synteny	Csor.00g058120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGACAGTCTGTAATCGCACTCGTTCTCATTTGCGCCGTCGTTGCTGGCGTCGGTGGCCAGTCGCCAGCTGCAGCTCCGACTACCGTTCCGGGTGCTACCTCGCCTGCAGCAGCAAAGTATACACCTCCAGCCGCGTCTCCTATATCGCCACCGACAAATTTATCTCCTGTCGCCGCTCCCCAAAAGCCGGTTACTCCAGCTCCCGTCTCCACGCCGCCAGCATCTGCGCCACCAGCAGTCGCTCCAGTAGCATCTCCACCGGCCAGCACTCCACCGACTGCTTCCGTTCCTGCTAGCTCTCCACCAGCTGCTTCCGTTCCGGCTAGCTCTCCACCGACTGCTTCTGTTCCGGCTAGCTCTCCCCCCGCTGCTTCCGTTCCAGCGGGCTCTCCGCCGGTTCCAGTTCCAGCAAGTTCTCCACCAGTTCCAGTACCGGAGAGCTCTCCTCCAGTATCAACTCCGACGCAATCTCCTCCTGCGCCAACTCCAACAAGCACTCCCGAAAGTGCTCCGCCTGTTGAGGTACCATCGCCGGCGCCTAGCAAGAAGTCGAGGAAGCACAAAGCACCAGCTCCTTCCCCGGCGTTGCTTGGTCCCCCTGCACCTCCTTCCGAAGCCCCTGGTGCAAGCGAGGAAGGTCCTTCACCCGGCCCTTCACTAGAAGACAAGGTAATTTAATTCCACCTAAATCTCTACCATCATACCCAATATGTGTCCATAATCTGTATAGAATTGATGGCATTGAGCTCATTTCACTCTGCCATTATAGCAAGTGAAATGAGCTCAATGCCACGCGCCATCGACACGCGTAGATCTAGCGTGTAAGAATCCTTAAGTCGAGTCTAAAGATTAACCCAAGGCCTCGAAGTACTCAATAACACGTCAAATCAAAAAGAAAGAAGATGTCAGAATGTCAGATCACACTATGCTCGAGATGAATAAATGTTATTCCAGTGTTCTGAGCTCACAGTGAGGCAAACACATCAATAAATTAAATAGAGTAGTGAGTCACATGTGATTATTAATTTTGAGCATAATATTAAAGAAATGGCATGGATCTGTGTTTTGTTGCAGAGTGGAGCTGAAGCACTGCAGAAGGTGGCCGGAAGCTTGGCTTTGGGATGGGCTGCCGTCGCCGTTAGCTTCATCATCTAGAGCGAGGAAAATAAGGAGAGAGATGATGTGATCGTTCTTCATTTATTTATATTGAATCTTTATTTTGTTTAAAATTTCCTCCATTGTACTCCATATCATAAGAGGTGCTTTTTGATTGAATTGATTGATGAAATTTGTTTTTACCGAATCGACCACACTTGGGTGTATGCTTTGATCGATTAACATTTGGGATCCTTTTTGTGTTCTGTAATTAATTCTCCTTAGTTTCCTCCTACATCATGTGTGACAATTTGGTGGAACACTCCAACACGACATCTTCACAGACAGATCTAGTAGCTCAAAAAAACTAAATTTAGTGAAAATCCTGAGGTTGCTTTCCAATTAAACAAGCCTTATTCGATAAAATGTATGAACAAAATACGAACACTTATTATTCTTTAACGCAACATCAACCGTAGTAATAGCAGTCCACCGACAGGGATAAAGTGAAGTGAGGGTTTTTTTTTTAAAAAAAAAAAATTATATATTTTGGATACGATGTTTGGTGGGGGATCTGAAATATATTTTTCGGTTGGGAATTACCACAAATAACATTCATGTCGGTGGTGGCAGTTGTGGCGGTAGCTACATAATTTATATTTCTATAATTCATAAATAATTCTCAAAATGCGTCTGCCTTCTTTCTTTTATTATTAATTATTATTATTATTATTATTATTATTAATTGACATTATTCATAACGTTGAAAGTTGAAATTGATCCCGAACATACTAATTTTGATTTAATGTTTGTATTAGAAGCTAAATTCCAATTAGCAGCTTGATCTGCATTAAACCTTTATGAAAAGAAGAAAACTGGGAGTGTGGTGGCGTGTCGGTGGTGTTTGCGGCCATGCTTTTTGATGGTTAAGAATAGGATATTCCCATAACCAAACTAAAGCAGCAGAACACAAAAAGATTTGATGCTATAAAACACTGTCCAACTTCCATACTAAGGAAAGAATCCAACCACTCTCTAACCTTCACCTTCAAGGAAATACATAAAAGCATTTTACAATAAATCACGTTTATTATTAGCATCTCAAACTCACTCTTGAAACTTTGATTAAATCATATTTAGAATGGATAGAATAGAGTGGACAAGCAAAGAACGCGACATATGCGTTTTAAAATTGCGATATGCAACGAGTCAAAACAGATAATGTCTTTTAGGGGTGTAGGTCATTCTTATAGGCATTTTCATGGGTCATTGCTGATTCGTCGTATAAATACCGTTGTCCAAGAGAGTAACTGGTATATAGTTTTTGCATTGTTATTTGTTCAAAATGTGGGGTAAGATGTTTGTTTGAATGCAGGGTGGGGGAATCATAAGCCAAGGGGCTTGTGCTGTGCCTGATTGTGACAGTGCCACTTATGGTGGGATAGCACCCTCATGGGTCGGCCTGGTTATCATCAACCACCGAAAGACAACCAAAACTATCAACTCTTCTCCTTTGCCTCTGGGCTTCCAGTTTGAAGAATGA

mRNA sequence

ATGGGGAGACAGTCTGTAATCGCACTCGTTCTCATTTGCGCCGTCGTTGCTGGCGTCGGTGGCCAGTCGCCAGCTGCAGCTCCGACTACCGTTCCGGGTGCTACCTCGCCTGCAGCAGCAAAGTATACACCTCCAGCCGCGTCTCCTATATCGCCACCGACAAATTTATCTCCTGTCGCCGCTCCCCAAAAGCCGGTTACTCCAGCTCCCGTCTCCACGCCGCCAGCATCTGCGCCACCAGCAGTCGCTCCAGTAGCATCTCCACCGGCCAGCACTCCACCGACTGCTTCCGTTCCTGCTAGCTCTCCACCAGCTGCTTCCGTTCCGGCTAGCTCTCCACCGACTGCTTCTGTTCCGGCTAGCTCTCCCCCCGCTGCTTCCGTTCCAGCGGGCTCTCCGCCGGTTCCAGTTCCAGCAAGTTCTCCACCAGTTCCAGTACCGGAGAGCTCTCCTCCAGTATCAACTCCGACGCAATCTCCTCCTGCGCCAACTCCAACAAGCACTCCCGAAAGTGCTCCGCCTGTTGAGGTACCATCGCCGGCGCCTAGCAAGAAGTCGAGGAAGCACAAAGCACCAGCTCCTTCCCCGGCGTTGCTTGGTCCCCCTGCACCTCCTTCCGAAGCCCCTGGTGCAAGCGAGGAAGGTCCTTCACCCGGCCCTTCACTAGAAGACAAGAGTGGAGCTGAAGCACTGCAGAAGGTGGCCGGAAGCTTGGCTTTGGGATGGGCTGCCGTCGCCGGTGGGGGAATCATAAGCCAAGGGGCTTGTGCTGTGCCTGATTGTGACAGTGCCACTTATGGTGGGATAGCACCCTCATGGGTCGGCCTGGTTATCATCAACCACCGAAAGACAACCAAAACTATCAACTCTTCTCCTTTGCCTCTGGGCTTCCAGTTTGAAGAATGA

Coding sequence (CDS)

ATGGGGAGACAGTCTGTAATCGCACTCGTTCTCATTTGCGCCGTCGTTGCTGGCGTCGGTGGCCAGTCGCCAGCTGCAGCTCCGACTACCGTTCCGGGTGCTACCTCGCCTGCAGCAGCAAAGTATACACCTCCAGCCGCGTCTCCTATATCGCCACCGACAAATTTATCTCCTGTCGCCGCTCCCCAAAAGCCGGTTACTCCAGCTCCCGTCTCCACGCCGCCAGCATCTGCGCCACCAGCAGTCGCTCCAGTAGCATCTCCACCGGCCAGCACTCCACCGACTGCTTCCGTTCCTGCTAGCTCTCCACCAGCTGCTTCCGTTCCGGCTAGCTCTCCACCGACTGCTTCTGTTCCGGCTAGCTCTCCCCCCGCTGCTTCCGTTCCAGCGGGCTCTCCGCCGGTTCCAGTTCCAGCAAGTTCTCCACCAGTTCCAGTACCGGAGAGCTCTCCTCCAGTATCAACTCCGACGCAATCTCCTCCTGCGCCAACTCCAACAAGCACTCCCGAAAGTGCTCCGCCTGTTGAGGTACCATCGCCGGCGCCTAGCAAGAAGTCGAGGAAGCACAAAGCACCAGCTCCTTCCCCGGCGTTGCTTGGTCCCCCTGCACCTCCTTCCGAAGCCCCTGGTGCAAGCGAGGAAGGTCCTTCACCCGGCCCTTCACTAGAAGACAAGAGTGGAGCTGAAGCACTGCAGAAGGTGGCCGGAAGCTTGGCTTTGGGATGGGCTGCCGTCGCCGGTGGGGGAATCATAAGCCAAGGGGCTTGTGCTGTGCCTGATTGTGACAGTGCCACTTATGGTGGGATAGCACCCTCATGGGTCGGCCTGGTTATCATCAACCACCGAAAGACAACCAAAACTATCAACTCTTCTCCTTTGCCTCTGGGCTTCCAGTTTGAAGAATGA

Protein sequence

MGRQSVIALVLICAVVAGVGGQSPAAAPTTVPGATSPAAAKYTPPAASPISPPTNLSPVAAPQKPVTPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPASSPPTASVPASSPPAASVPAGSPPVPVPASSPPVPVPESSPPVSTPTQSPPAPTPTSTPESAPPVEVPSPAPSKKSRKHKAPAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGAEALQKVAGSLALGWAAVAGGGIISQGACAVPDCDSATYGGIAPSWVGLVIINHRKTTKTINSSPLPLGFQFEE

Homology

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BLAST of Csor.00g058120 vs. ExPASy Swiss-Prot
Match: Q9FPR2 (Lysine-rich arabinogalactan protein 18 OS=Arabidopsis thaliana OX=3702 GN=AGP18 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.5e-17
Identity = 114/257 (44.36%), Postives = 139/257 (54.09%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTVPGATSPAAAKYTPPAASPISPPTNLSPVA 60
           M R  ++ + LIC VVAGVGGQSP ++PT  P  T+P+A     P  SP   P   SP  
Sbjct: 1   MDRNFLLTVTLICIVVAGVGGQSPISSPTKSP--TTPSA-----PTTSPTKSPAVTSP-- 60

Query: 61  APQKPVTPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPASSPPTASVPA 120
                 T AP  TP ASA    +PV SP +  P    V  SSPP   VP SSPP   VPA
Sbjct: 61  ------TTAPAKTPTASAS---SPVESPKSPAP----VSESSPPPTPVPESSPP---VPA 120

Query: 121 SSPPAASVPAGSPPVPVP-ASSPPVPVPESSPPVSTPTQSPPAPTPTSTPESAPPVEVPS 180
              P  S P  SPPVP P A SPP PV                        +AP  +VP+
Sbjct: 121 ---PMVSSPVSSPPVPAPVADSPPAPV------------------------AAPVADVPA 180

Query: 181 PAPS------KKSRKHK-APAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGA---E 240
           PAPS      KKS+KH+ APAP+P LLGPPAPP+E+PG + +  SPGPS +D+SGA    
Sbjct: 181 PAPSKHKKTTKKSKKHQAAPAPAPELLGPPAPPTESPGPNSDAFSPGPSADDQSGAASTR 205

Query: 241 ALQKVA-GSLALGWAAV 246
            L+ VA G++A  WA +
Sbjct: 241 VLRNVAVGAVATAWAVL 205

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BLAST of Csor.00g058120 vs. ExPASy Swiss-Prot
Match: Q9C5S0 (Classical arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=AGP9 PE=1 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 1.9e-07
Identity = 97/242 (40.08%), Postives = 120/242 (49.59%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTVPGATSPAAAKYTPPAASPISPPTNLSPVA 60
           M R   IA++ I  ++AGV GQ+P + PT  P                            
Sbjct: 1   MARSFAIAVICI-VLIAGVTGQAPTSPPTATP---------------------------- 60

Query: 61  APQKPVTPAPVST-PPASAPPAVAPVASPPASTPPTASVPASSPPAASVPASSPPTASVP 120
           AP  P TP P +T PP SAPP V    SPP  T  TA  PA+ PP    P SSPP    P
Sbjct: 61  APPTPTTPPPAATPPPVSAPPPV--TTSPPPVT--TAPPPANPPP----PVSSPP----P 120

Query: 121 ASSPPAASVPAGSPPVPVPASSPPVPVPESSPPVSTPTQSPPAPTPTSTPESAPPVEVPS 180
           AS PPA   P  SPP PV  +SPP   P + PPV+TP   PPAP       ++PP +VP+
Sbjct: 121 ASPPPATPPPVASPPPPV--ASPP---PATPPPVATP---PPAPL------ASPPAQVPA 180

Query: 181 PAPSKKSRKHKAPAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGAEALQKVAGSLA 240
           PAP+ K     +P+PSP+   PP P S+APG S +  SP PS  D +      K+  SL 
Sbjct: 181 PAPTTKP---DSPSPSPS-SSPPLPSSDAPGPSTDSISPAPSPTDVNDQNGASKMVSSLV 183

Query: 241 LG 242
            G
Sbjct: 241 FG 183

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BLAST of Csor.00g058120 vs. ExPASy Swiss-Prot
Match: Q9FPQ6 (Vegetative cell wall protein gp1 OS=Chlamydomonas reinhardtii OX=3055 GN=GP1 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 3.4e-04
Identity = 80/199 (40.20%), Postives = 102/199 (51.26%), Query Frame = 0


Query: 24  PAAAPTTVPGATSPAAAKYTPPAASPISPPTNLSPVAAPQKPVTPAPVSTPPASAPPAVA 83
           P+ +P   P  + P+ A   PP+ +P SP   + P  +P  P +PAP S  P S  P V 
Sbjct: 127 PSPSPPAPPSPSPPSPAPPLPPSPAPPSPSPPVPPSPSPPVPPSPAPPSPTPPSPSPPVP 186

Query: 84  PVASPPASTPPTASVPASSPPAASVPAS-SPPTASVPA-SSPPAASVPAGSPPVPVPASS 143
           P  +PP+  PP    PA   PA  VP S +PP+   PA  SPP+ + P+ SPP P P+  
Sbjct: 187 PSPAPPSPAPPVPPSPAPPSPAPPVPPSPAPPSPPSPAPPSPPSPAPPSPSPPAP-PSPV 246

Query: 144 PPVPVPESSPPVSTPTQSPPAPTPTSTPESAPPVEVPSPAPSKKSRKHKAPAPSPALLGP 203
           PP P P S  P   P+  PPAP P  +P   PP   P PA +       +P PSPA   P
Sbjct: 247 PPSPAPPSPAP---PSPKPPAPPPPPSPPPPPPPRPPFPANTPMPPSPPSPPPSPAPPTP 306

Query: 204 PAPPSEAPGASEEGPSPGP 221
           P PPS +P  S   PSP P
Sbjct: 307 PTPPSPSP-PSPVPPSPAP 320

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BLAST of Csor.00g058120 vs. ExPASy Swiss-Prot
Match: Q9S740 (Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana OX=3702 GN=AGP19 PE=2 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 5.8e-04
Identity = 100/248 (40.32%), Postives = 126/248 (50.81%), Query Frame = 0


Query: 1   MGRQSVI-ALVLICAVVA--GVGGQSPAAAPTTVPGATSPAAAKYTPPAASPISPPTNLS 60
           M   S+I +L+L  A+++   V  Q PAA+P T    T+P      PP  +   P T   
Sbjct: 1   MESNSIIWSLLLASALISSFSVNAQGPAASPVT-STTTAPPPTTAAPPTTAAPPPTTTTP 60

Query: 61  PVAA---PQKPVTPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPASSPP 120
           PV+A   P  PVTP P  TP +   P VAPV SP  +TPP    P  SPP AS P  SPP
Sbjct: 61  PVSAAQPPASPVTPPPAVTPTSPPAPKVAPVISP--ATPPPQ--PPQSPP-ASAPTVSPP 120

Query: 121 TASVPASSPPAASVPAGSPPVPVPASSPPVPVPESSPPVSTPTQSPPAPTPTSTPESAPP 180
               P S PPA + P  +P  P PA + P P P S PP   P   PP   P  +P S PP
Sbjct: 121 ----PVSPPPAPTSPPPTPASPPPAPASPPPAPASPPP--APVSPPPVQAP--SPISLPP 180

Query: 181 VEVPSPAPSKKSRKHK------APAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGA 237
              P+PAP+K  RKHK      APAP+P    PP+PPS       +  +P PS  + +G 
Sbjct: 181 --APAPAPTKHKRKHKHKRHHHAPAPAPI---PPSPPSPPVLTDPQDTAPAPS-PNTNGG 228

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BLAST of Csor.00g058120 vs. NCBI nr
Match: KAG6604150.1 (hypothetical protein SDJN03_04759, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 505 bits (1301), Expect = 7.23e-179
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTVPGATSPAAAKYTPPAASPISPPTNLSPVA 60
           MGRQSVIALVLICAVVAGVGGQSPAAAPTTVPGATSPAAAKYTPPAASPISPPTNLSPVA
Sbjct: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTVPGATSPAAAKYTPPAASPISPPTNLSPVA 60

Query: 61  APQKPVTPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPASSPPTASVPA 120
           APQKPVTPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPASSPPTASVPA
Sbjct: 61  APQKPVTPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPASSPPTASVPA 120

Query: 121 SSPPAASVPAGSPPVPVPASSPPVPVPESSPPVSTPTQSPPAPTPTSTPESAPPVEVPSP 180
           SSPPAASVPAGSPPVPVPASSPPVPVPESSPPVSTPTQSPPAPTPTSTPESAPPVEVPSP
Sbjct: 121 SSPPAASVPAGSPPVPVPASSPPVPVPESSPPVSTPTQSPPAPTPTSTPESAPPVEVPSP 180

Query: 181 APSKKSRKHKAPAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGAEALQKVAGSLAL 240
           APSKKSRKHKAPAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGAEALQKVAGSLAL
Sbjct: 181 APSKKSRKHKAPAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGAEALQKVAGSLAL 240

Query: 241 GWAAVAGGGIISQGACAVPDCDSATYGGIAPSWVGLVIINHRKTTKTINSSPLPLGFQFE 300
           GWAAVAGGGIISQGACAVPDCDSATYGGIAPSWVGLVIINHRKTTKTINSSPLPLGFQFE
Sbjct: 241 GWAAVAGGGIISQGACAVPDCDSATYGGIAPSWVGLVIINHRKTTKTINSSPLPLGFQFE 300

[Close]

BLAST of Csor.00g058120 vs. NCBI nr
Match: KAG7034312.1 (Lysine-rich arabinogalactan protein 18 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 389 bits (999), Expect = 1.14e-133
Identity = 244/246 (99.19%), Postives = 245/246 (99.59%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTVPGATSPAAAKYTPPAASPISPPTNLSPVA 60
           MGRQSVIALVLICAVVAGVGGQSPAAAPTTVPGATSPAAAKYTPPAASPISPPTNLSPVA
Sbjct: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTVPGATSPAAAKYTPPAASPISPPTNLSPVA 60

Query: 61  APQKPVTPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPASSPPTASVPA 120
           APQKPVTPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPASSPPTASVPA
Sbjct: 61  APQKPVTPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPASSPPTASVPA 120

Query: 121 SSPPAASVPAGSPPVPVPASSPPVPVPESSPPVSTPTQSPPAPTPTSTPESAPPVEVPSP 180
           SSPPAASVPA SPPVPVPASSPPVPVPESSPPVSTPTQSPPAPTPTSTP+SAPPVEVPSP
Sbjct: 121 SSPPAASVPASSPPVPVPASSPPVPVPESSPPVSTPTQSPPAPTPTSTPDSAPPVEVPSP 180

Query: 181 APSKKSRKHKAPAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGAEALQKVAGSLAL 240
           APSKKSRKHKAPAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGAEALQKVAGSLAL
Sbjct: 181 APSKKSRKHKAPAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGAEALQKVAGSLAL 240

Query: 241 GWAAVA 246
           GWAAVA
Sbjct: 241 GWAAVA 246

[Close]

BLAST of Csor.00g058120 vs. NCBI nr
Match: XP_023545096.1 (lysine-rich arabinogalactan protein 18-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 376 bits (966), Expect = 1.19e-128
Identity = 239/246 (97.15%), Postives = 240/246 (97.56%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTVPGATSPAAAKYTPPAASPISPPTNLSPVA 60
           MGRQSVIALVLICAVVAGVGGQSPAAAPTTVPGATSPAAAKYTPPAASPISPPTN SPVA
Sbjct: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTVPGATSPAAAKYTPPAASPISPPTNSSPVA 60

Query: 61  APQKPVTPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPASSPPTASVPA 120
           APQKPV+PAPVSTPPASAP AVAPVASPPASTPPTASVPASSPPAASVPASSPPTASVPA
Sbjct: 61  APQKPVSPAPVSTPPASAPIAVAPVASPPASTPPTASVPASSPPAASVPASSPPTASVPA 120

Query: 121 SSPPAASVPAGSPPVPVPASSPPVPVPESSPPVSTPTQSPPAPTPTSTPESAPPVEVPSP 180
           SSPPAASVPA SP VPVPASSPPVPVPESSPPVSTPTQSPPAPTPTSTPESAPPVE PSP
Sbjct: 121 SSPPAASVPASSPSVPVPASSPPVPVPESSPPVSTPTQSPPAPTPTSTPESAPPVEAPSP 180

Query: 181 APSKKSRKHKAPAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGAEALQKVAGSLAL 240
           APSKKSRKHKAPAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGAE LQKVAGSLAL
Sbjct: 181 APSKKSRKHKAPAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGAETLQKVAGSLAL 240

Query: 241 GWAAVA 246
           GWAAVA
Sbjct: 241 GWAAVA 246

[Close]

BLAST of Csor.00g058120 vs. NCBI nr
Match: XP_022950679.1 (lysine-rich arabinogalactan protein 18-like [Cucurbita moschata])

HSP 1 Score: 375 bits (964), Expect = 2.87e-128
Identity = 242/251 (96.41%), Postives = 242/251 (96.41%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTVPGATSPAAAKYTPPAASPISPPTNLSPVA 60
           MGRQSVIALVLICAVVAGVGGQSPAAAPTTVPGATSPAAAKYTPPAASPISPPTNLSPVA
Sbjct: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTVPGATSPAAAKYTPPAASPISPPTNLSPVA 60

Query: 61  APQKPVTPAPVSTPPASAPPAVAPVASPPASTPP-----TASVPASSPPAASVPASSPPT 120
           APQKPVTPAPVSTPPASAPPAVAPVASPPASTPP     TASVPASS PAASVPASSPPT
Sbjct: 61  APQKPVTPAPVSTPPASAPPAVAPVASPPASTPPASTPPTASVPASSSPAASVPASSPPT 120

Query: 121 ASVPASSPPAASVPAGSPPVPVPASSPPVPVPESSPPVSTPTQSPPAPTPTSTPESAPPV 180
           ASVPASSPPAASVPA SPPVPVPASSPPVPVPESSPPVS PTQSPPAPTPTSTPESAPPV
Sbjct: 121 ASVPASSPPAASVPAISPPVPVPASSPPVPVPESSPPVSAPTQSPPAPTPTSTPESAPPV 180

Query: 181 EVPSPAPSKKSRKHKAPAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGAEALQKVA 240
           EVPSP PSKKSRKHKAPAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGAEALQKVA
Sbjct: 181 EVPSPEPSKKSRKHKAPAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGAEALQKVA 240

Query: 241 GSLALGWAAVA 246
           GSLALGWAAVA
Sbjct: 241 GSLALGWAAVA 251

[Close]

BLAST of Csor.00g058120 vs. NCBI nr
Match: XP_022978052.1 (lysine-rich arabinogalactan protein 18-like [Cucurbita maxima])

HSP 1 Score: 364 bits (935), Expect = 6.20e-124
Identity = 231/246 (93.90%), Postives = 237/246 (96.34%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTVPGATSPAAAKYTPPAASPISPPTNLSPVA 60
           MGRQSVIALVLICAV+AGVGGQSPAAAPT+VPGATSPAAAK+TPPAASP+SPPTN SPVA
Sbjct: 1   MGRQSVIALVLICAVIAGVGGQSPAAAPTSVPGATSPAAAKHTPPAASPVSPPTNSSPVA 60

Query: 61  APQKPVTPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPASSPPTASVPA 120
           APQKP TPAPVSTPPASAP AVAPVASPP STPPTASVP SSPPAASVPASSPPTASVPA
Sbjct: 61  APQKPATPAPVSTPPASAPLAVAPVASPPVSTPPTASVPPSSPPAASVPASSPPTASVPA 120

Query: 121 SSPPAASVPAGSPPVPVPASSPPVPVPESSPPVSTPTQSPPAPTPTSTPESAPPVEVPSP 180
            SPPAASVPA SPPV VPASSPPVPVPESSPPVSTPTQSPPAPTPTSTPESAPPVEVP+P
Sbjct: 121 ISPPAASVPASSPPVLVPASSPPVPVPESSPPVSTPTQSPPAPTPTSTPESAPPVEVPAP 180

Query: 181 APSKKSRKHKAPAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGAEALQKVAGSLAL 240
           APS KS+KHKAPAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGAEALQKVAGSLAL
Sbjct: 181 APSNKSKKHKAPAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGAEALQKVAGSLAL 240

Query: 241 GWAAVA 246
           GWAAVA
Sbjct: 241 GWAAVA 246

[Close]

BLAST of Csor.00g058120 vs. ExPASy TrEMBL
Match: A0A6J1GGJ7 (lysine-rich arabinogalactan protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC111453705 PE=4 SV=1)

HSP 1 Score: 375 bits (964), Expect = 1.39e-128
Identity = 242/251 (96.41%), Postives = 242/251 (96.41%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTVPGATSPAAAKYTPPAASPISPPTNLSPVA 60
           MGRQSVIALVLICAVVAGVGGQSPAAAPTTVPGATSPAAAKYTPPAASPISPPTNLSPVA
Sbjct: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTVPGATSPAAAKYTPPAASPISPPTNLSPVA 60

Query: 61  APQKPVTPAPVSTPPASAPPAVAPVASPPASTPP-----TASVPASSPPAASVPASSPPT 120
           APQKPVTPAPVSTPPASAPPAVAPVASPPASTPP     TASVPASS PAASVPASSPPT
Sbjct: 61  APQKPVTPAPVSTPPASAPPAVAPVASPPASTPPASTPPTASVPASSSPAASVPASSPPT 120

Query: 121 ASVPASSPPAASVPAGSPPVPVPASSPPVPVPESSPPVSTPTQSPPAPTPTSTPESAPPV 180
           ASVPASSPPAASVPA SPPVPVPASSPPVPVPESSPPVS PTQSPPAPTPTSTPESAPPV
Sbjct: 121 ASVPASSPPAASVPAISPPVPVPASSPPVPVPESSPPVSAPTQSPPAPTPTSTPESAPPV 180

Query: 181 EVPSPAPSKKSRKHKAPAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGAEALQKVA 240
           EVPSP PSKKSRKHKAPAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGAEALQKVA
Sbjct: 181 EVPSPEPSKKSRKHKAPAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGAEALQKVA 240

Query: 241 GSLALGWAAVA 246
           GSLALGWAAVA
Sbjct: 241 GSLALGWAAVA 251

[Close]

BLAST of Csor.00g058120 vs. ExPASy TrEMBL
Match: A0A6J1IK34 (lysine-rich arabinogalactan protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC111478152 PE=4 SV=1)

HSP 1 Score: 364 bits (935), Expect = 3.00e-124
Identity = 231/246 (93.90%), Postives = 237/246 (96.34%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTVPGATSPAAAKYTPPAASPISPPTNLSPVA 60
           MGRQSVIALVLICAV+AGVGGQSPAAAPT+VPGATSPAAAK+TPPAASP+SPPTN SPVA
Sbjct: 1   MGRQSVIALVLICAVIAGVGGQSPAAAPTSVPGATSPAAAKHTPPAASPVSPPTNSSPVA 60

Query: 61  APQKPVTPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPASSPPTASVPA 120
           APQKP TPAPVSTPPASAP AVAPVASPP STPPTASVP SSPPAASVPASSPPTASVPA
Sbjct: 61  APQKPATPAPVSTPPASAPLAVAPVASPPVSTPPTASVPPSSPPAASVPASSPPTASVPA 120

Query: 121 SSPPAASVPAGSPPVPVPASSPPVPVPESSPPVSTPTQSPPAPTPTSTPESAPPVEVPSP 180
            SPPAASVPA SPPV VPASSPPVPVPESSPPVSTPTQSPPAPTPTSTPESAPPVEVP+P
Sbjct: 121 ISPPAASVPASSPPVLVPASSPPVPVPESSPPVSTPTQSPPAPTPTSTPESAPPVEVPAP 180

Query: 181 APSKKSRKHKAPAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGAEALQKVAGSLAL 240
           APS KS+KHKAPAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGAEALQKVAGSLAL
Sbjct: 181 APSNKSKKHKAPAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGAEALQKVAGSLAL 240

Query: 241 GWAAVA 246
           GWAAVA
Sbjct: 241 GWAAVA 246

[Close]

BLAST of Csor.00g058120 vs. ExPASy TrEMBL
Match: A0A1S3B0X7 (lysine-rich arabinogalactan protein 18-like OS=Cucumis melo OX=3656 GN=LOC103484821 PE=4 SV=1)

HSP 1 Score: 306 bits (783), Expect = 2.74e-101
Identity = 203/247 (82.19%), Postives = 212/247 (85.83%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTVPGATSPAAAKYTPPAASPISPPTNLSPVA 60
           MGRQSVIALVLICAVVA VGGQSPAAAPTT P AT P AAKY PPAASP+SPPTN SP A
Sbjct: 1   MGRQSVIALVLICAVVAVVGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA 60

Query: 61  APQKPVTPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPASSPPTASVPA 120
           APQKP TPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVP SSPP      
Sbjct: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPP------ 120

Query: 121 SSPPAASVPAGSPPVPVPASSPPVPVPESSPPVSTPTQSPPAPTPTS-TPESAPPVEVPS 180
               AA+VPA SPPVPVP SSPPVPVP SSPPV TPT+SPPAP  +   P ++PP EVP+
Sbjct: 121 ----AATVPASSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPAEVPA 180

Query: 181 PAPSKKSRKHKAPAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGAEALQKVAGSLA 240
           PAPSKKS+KH+APAPSPALLGPPAPPSEAP  SEEGPSP PSLEDKSGAEAL KVAGSLA
Sbjct: 181 PAPSKKSKKHRAPAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDKSGAEALMKVAGSLA 237

Query: 241 LGWAAVA 246
           LGWAAVA
Sbjct: 241 LGWAAVA 237

[Close]

BLAST of Csor.00g058120 vs. ExPASy TrEMBL
Match: Q9XIV1 (Arabinogalactan protein OS=Cucumis sativus OX=3659 GN=Csa_6G493850 PE=2 SV=1)

HSP 1 Score: 296 bits (758), Expect = 1.76e-97
Identity = 201/248 (81.05%), Postives = 211/248 (85.08%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTVPGATSPAAAKYTPPAASPISPPTNLSPVA 60
           MGRQSVIALVLICAVVAGVGGQSPAAAPTT P AT P AA Y PPAASP+S PTN SP A
Sbjct: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPAATPPVAATYPPPAASPVSTPTNPSPAA 60

Query: 61  APQKPVTPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPASSPPTASVPA 120
           APQKP TPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVP SSPP      
Sbjct: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPP------ 120

Query: 121 SSPPAASVPAGSPPVPVPASSPPVPVPESSPPVSTPTQSPPAPTPTS-TPESAPPVEVPS 180
               AA+VPA SPPVPVP SSPPV VP SSPPV TPT+SPPAP  +   P ++PPVEVP+
Sbjct: 121 ----AATVPASSPPVPVPVSSPPVSVPVSSPPVPTPTESPPAPESSPPAPVASPPVEVPA 180

Query: 181 PAPSKK-SRKHKAPAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGAEALQKVAGSL 240
           PAPSKK S+KH+APAPSPALLGPPAPPSEAP  SEEGP+P PSLEDKSGAEAL KVAGSL
Sbjct: 181 PAPSKKKSKKHRAPAPSPALLGPPAPPSEAPAGSEEGPAPSPSLEDKSGAEALMKVAGSL 238

Query: 241 ALGWAAVA 246
           ALGWAAVA
Sbjct: 241 ALGWAAVA 238

[Close]

BLAST of Csor.00g058120 vs. ExPASy TrEMBL
Match: A0A6J1KVL2 (lysine-rich arabinogalactan protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC111496835 PE=4 SV=1)

HSP 1 Score: 296 bits (758), Expect = 2.31e-97
Identity = 205/250 (82.00%), Postives = 216/250 (86.40%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTVPGATSPAAAKYTPPAASPISPPTNLSPVA 60
           MGRQSVIALVLICAVVAGVGGQSPAAAPTT P   +P AAKY PPAASP+ PPTN SP A
Sbjct: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPATPAPVAAKYPPPAASPVVPPTNSSPAA 60

Query: 61  APQKPVTPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPASSPPTASVPA 120
           APQKPVTPAPVSTPPA     VAPVASPPASTPPTASVPASSPPAASVPASSPP ASVPA
Sbjct: 61  APQKPVTPAPVSTPPA-----VAPVASPPASTPPTASVPASSPPAASVPASSPPAASVPA 120

Query: 121 SSPPAASVPAGSPPVPVPASSPPVPVPESSPPVSTPTQSPPAP-TPTSTPESAPPVEVPS 180
           SSPPA +VPA SPPVPVPASSPPVPVPESSPPV TP +SPPAP +    P ++PP EVPS
Sbjct: 121 SSPPA-TVPASSPPVPVPASSPPVPVPESSPPVPTPIESPPAPESAPPAPVASPPAEVPS 180

Query: 181 PAPSKK-SRKHKAPAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGAEAL----QKV 240
           PAPSKK S+KHKAPAPSPALLGPPAPPSEAPG SEEGPSP PSL+DKSGAEAL    QKV
Sbjct: 181 PAPSKKKSKKHKAPAPSPALLGPPAPPSEAPGGSEEGPSPAPSLDDKSGAEALRRNMQKV 240

Query: 241 AGSLALGWAA 244
            GSLALG++A
Sbjct: 241 VGSLALGFSA 244

[Close]

BLAST of Csor.00g058120 vs. TAIR 10
Match: AT4G37450.1 (arabinogalactan protein 18 )

HSP 1 Score: 90.5 bits (223), Expect = 2.5e-18
Identity = 114/257 (44.36%), Postives = 139/257 (54.09%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTVPGATSPAAAKYTPPAASPISPPTNLSPVA 60
           M R  ++ + LIC VVAGVGGQSP ++PT  P  T+P+A     P  SP   P   SP  
Sbjct: 1   MDRNFLLTVTLICIVVAGVGGQSPISSPTKSP--TTPSA-----PTTSPTKSPAVTSP-- 60

Query: 61  APQKPVTPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPASSPPTASVPA 120
                 T AP  TP ASA    +PV SP +  P    V  SSPP   VP SSPP   VPA
Sbjct: 61  ------TTAPAKTPTASAS---SPVESPKSPAP----VSESSPPPTPVPESSPP---VPA 120

Query: 121 SSPPAASVPAGSPPVPVP-ASSPPVPVPESSPPVSTPTQSPPAPTPTSTPESAPPVEVPS 180
              P  S P  SPPVP P A SPP PV                        +AP  +VP+
Sbjct: 121 ---PMVSSPVSSPPVPAPVADSPPAPV------------------------AAPVADVPA 180

Query: 181 PAPS------KKSRKHK-APAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGA---E 240
           PAPS      KKS+KH+ APAP+P LLGPPAPP+E+PG + +  SPGPS +D+SGA    
Sbjct: 181 PAPSKHKKTTKKSKKHQAAPAPAPELLGPPAPPTESPGPNSDAFSPGPSADDQSGAASTR 205

Query: 241 ALQKVA-GSLALGWAAV 246
            L+ VA G++A  WA +
Sbjct: 241 VLRNVAVGAVATAWAVL 205

[Close]

BLAST of Csor.00g058120 vs. TAIR 10
Match: AT2G14890.1 (arabinogalactan protein 9 )

HSP 1 Score: 58.2 bits (139), Expect = 1.4e-08
Identity = 97/242 (40.08%), Postives = 120/242 (49.59%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTVPGATSPAAAKYTPPAASPISPPTNLSPVA 60
           M R   IA++ I  ++AGV GQ+P + PT  P                            
Sbjct: 1   MARSFAIAVICI-VLIAGVTGQAPTSPPTATP---------------------------- 60

Query: 61  APQKPVTPAPVST-PPASAPPAVAPVASPPASTPPTASVPASSPPAASVPASSPPTASVP 120
           AP  P TP P +T PP SAPP V    SPP  T  TA  PA+ PP    P SSPP    P
Sbjct: 61  APPTPTTPPPAATPPPVSAPPPV--TTSPPPVT--TAPPPANPPP----PVSSPP----P 120

Query: 121 ASSPPAASVPAGSPPVPVPASSPPVPVPESSPPVSTPTQSPPAPTPTSTPESAPPVEVPS 180
           AS PPA   P  SPP PV  +SPP   P + PPV+TP   PPAP       ++PP +VP+
Sbjct: 121 ASPPPATPPPVASPPPPV--ASPP---PATPPPVATP---PPAPL------ASPPAQVPA 180

Query: 181 PAPSKKSRKHKAPAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGAEALQKVAGSLA 240
           PAP+ K     +P+PSP+   PP P S+APG S +  SP PS  D +      K+  SL 
Sbjct: 181 PAPTTKP---DSPSPSPS-SSPPLPSSDAPGPSTDSISPAPSPTDVNDQNGASKMVSSLV 183

Query: 241 LG 242
            G
Sbjct: 241 FG 183

[Close]

BLAST of Csor.00g058120 vs. TAIR 10
Match: AT2G14890.2 (arabinogalactan protein 9 )

HSP 1 Score: 53.9 bits (128), Expect = 2.6e-07
Identity = 93/225 (41.33%), Postives = 114/225 (50.67%), Query Frame = 0


Query: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTVPGATSPAAAKYTPPAASPISPPTNLSPVA 60
           M R   IA++ I  ++AGV GQ+P + PT  P                            
Sbjct: 1   MARSFAIAVICI-VLIAGVTGQAPTSPPTATP---------------------------- 60

Query: 61  APQKPVTPAPVST-PPASAPPAVAPVASPPASTPPTASVPASSPPAASVPASSPPTASVP 120
           AP  P TP P +T PP SAPP V    SPP  T  TA  PA+ PP    P SSPP    P
Sbjct: 61  APPTPTTPPPAATPPPVSAPPPV--TTSPPPVT--TAPPPANPPP----PVSSPP----P 120

Query: 121 ASSPPAASVPAGSPPVPVPASSPPVPVPESSPPVSTPTQSPPAPTPTSTPESAPPVEVPS 180
           AS PPA   P  SPP PV  +SPP   P + PPV+TP   PPAP       ++PP +VP+
Sbjct: 121 ASPPPATPPPVASPPPPV--ASPP---PATPPPVATP---PPAPL------ASPPAQVPA 166

Query: 181 PAPSKKSRKHKAPAPSPALLGPPAPPSEAPGASEEGPSPGPSLED 225
           PAP+ K     +P+PSP+   PP P S+APG S +  SP PS  D
Sbjct: 181 PAPTTKP---DSPSPSPS-SSPPLPSSDAPGPSTDSISPAPSPTD 166

[Close]

BLAST of Csor.00g058120 vs. TAIR 10
Match: AT1G68725.1 (arabinogalactan protein 19 )

HSP 1 Score: 46.6 bits (109), Expect = 4.1e-05
Identity = 100/248 (40.32%), Postives = 126/248 (50.81%), Query Frame = 0


Query: 1   MGRQSVI-ALVLICAVVA--GVGGQSPAAAPTTVPGATSPAAAKYTPPAASPISPPTNLS 60
           M   S+I +L+L  A+++   V  Q PAA+P T    T+P      PP  +   P T   
Sbjct: 1   MESNSIIWSLLLASALISSFSVNAQGPAASPVT-STTTAPPPTTAAPPTTAAPPPTTTTP 60

Query: 61  PVAA---PQKPVTPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPASSPP 120
           PV+A   P  PVTP P  TP +   P VAPV SP  +TPP    P  SPP AS P  SPP
Sbjct: 61  PVSAAQPPASPVTPPPAVTPTSPPAPKVAPVISP--ATPPPQ--PPQSPP-ASAPTVSPP 120

Query: 121 TASVPASSPPAASVPAGSPPVPVPASSPPVPVPESSPPVSTPTQSPPAPTPTSTPESAPP 180
               P S PPA + P  +P  P PA + P P P S PP   P   PP   P  +P S PP
Sbjct: 121 ----PVSPPPAPTSPPPTPASPPPAPASPPPAPASPPP--APVSPPPVQAP--SPISLPP 180

Query: 181 VEVPSPAPSKKSRKHK------APAPSPALLGPPAPPSEAPGASEEGPSPGPSLEDKSGA 237
              P+PAP+K  RKHK      APAP+P    PP+PPS       +  +P PS  + +G 
Sbjct: 181 --APAPAPTKHKRKHKHKRHHHAPAPAPI---PPSPPSPPVLTDPQDTAPAPS-PNTNGG 228

[Close]

BLAST of Csor.00g058120 vs. TAIR 10
Match: AT3G22142.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 46.2 bits (108), Expect = 5.4e-05
Identity = 80/215 (37.21%), Postives = 110/215 (51.16%), Query Frame = 0


Query: 25  AAAPTTVPGATSPAAAKYTPPAASP--ISPPTNLSPVAAPQKPVTPAPVSTPPASAPP-- 84
           A  PTT P   +P  AK  PP  +P   +PPT   P++ P  P++  PV+TPPA+ PP  
Sbjct: 436 ATPPTTTPPTATPPVAK--PPVETPPIATPPTAKPPISTP--PISKPPVATPPAATPPIT 495

Query: 85  --------------AVAPVASPPASTPPTASVPASSPPAASVPASSPPTASVPASSPPAA 144
                         A+ PVA PP  TPPTA+ P ++PP A  P ++PPTA+ P ++PP A
Sbjct: 496 TPTPVKPPVATPPLAIPPVAKPPVVTPPTATPPIATPPIAKSPVATPPTATPPVATPPIA 555

Query: 145 SVPAGSPPVPV-PASSPPVPVPE-SSPPVST-PTQSPPAPTP-------TSTPESAPPVE 204
             P  +PP    P ++PPV  P  ++PP++T PT  PP  TP        + P + PP+ 
Sbjct: 556 KPPVVTPPTTTPPTATPPVAKPPVATPPIATPPTAKPPISTPPISKSPVATPPAATPPIT 615

Query: 205 VPSPAPSKKSRKHKAPAPSPALLGPP--APPSEAP 210
            P PA        K P  +P +  PP   PP   P
Sbjct: 616 TPPPA--------KPPVATPPIATPPIAKPPVATP 638

The following BLAST results are available for this feature:

BLAST of Csor.00g058120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FPR2	3.5e-17	44.36	Lysine-rich arabinogalactan protein 18 OS=Arabidopsis thaliana OX=3702 GN=AGP18 ...	[more]
Q9C5S0	1.9e-07	40.08	Classical arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=AGP9 PE=1...	[more]
Q9FPQ6	3.4e-04	40.20	Vegetative cell wall protein gp1 OS=Chlamydomonas reinhardtii OX=3055 GN=GP1 PE=...	[more]
Q9S740	5.8e-04	40.32	Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana OX=3702 GN=AGP19 ...	[more]

BLAST of Csor.00g058120 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6604150.1	7.23e-179	100.00	hypothetical protein SDJN03_04759, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7034312.1	1.14e-133	99.19	Lysine-rich arabinogalactan protein 18 [Cucurbita argyrosperma subsp. argyrosper...	[more]
XP_023545096.1	1.19e-128	97.15	lysine-rich arabinogalactan protein 18-like [Cucurbita pepo subsp. pepo]	[more]
XP_022950679.1	2.87e-128	96.41	lysine-rich arabinogalactan protein 18-like [Cucurbita moschata]	[more]
XP_022978052.1	6.20e-124	93.90	lysine-rich arabinogalactan protein 18-like [Cucurbita maxima]	[more]

BLAST of Csor.00g058120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GGJ7	1.39e-128	96.41	lysine-rich arabinogalactan protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1IK34	3.00e-124	93.90	lysine-rich arabinogalactan protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A1S3B0X7	2.74e-101	82.19	lysine-rich arabinogalactan protein 18-like OS=Cucumis melo OX=3656 GN=LOC103484...	[more]
Q9XIV1	1.76e-97	81.05	Arabinogalactan protein OS=Cucumis sativus OX=3659 GN=Csa_6G493850 PE=2 SV=1	[more]
A0A6J1KVL2	2.31e-97	82.00	lysine-rich arabinogalactan protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of Csor.00g058120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37450.1	2.5e-18	44.36	arabinogalactan protein 18	[more]
AT2G14890.1	1.4e-08	40.08	arabinogalactan protein 9	[more]
AT2G14890.2	2.6e-07	41.33	arabinogalactan protein 9	[more]
AT1G68725.1	4.1e-05	40.32	arabinogalactan protein 19	[more]
AT3G22142.1	5.4e-05	37.21	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..211
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..229
None	No IPR available	PANTHER	PTHR37209:SF3	LYSINE-RICH ARABINOGALACTAN PROTEIN 17-RELATED	coord: 107..246
None	No IPR available	PANTHER	PTHR37209:SF3	LYSINE-RICH ARABINOGALACTAN PROTEIN 17-RELATED	coord: 1..137
IPR044981	Lysine-rich arabinogalactan protein AGP9/17/18	PANTHER	PTHR37209	LYSINE-RICH ARABINOGALACTAN PROTEIN 17-RELATED	coord: 1..137
IPR044981	Lysine-rich arabinogalactan protein AGP9/17/18	PANTHER	PTHR37209	LYSINE-RICH ARABINOGALACTAN PROTEIN 17-RELATED	coord: 107..246

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g058120.m01	Csor.00g058120.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane