Csor.00g053930 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g053930
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Tail fiber
Location	Csor_Chr12: 1801668 .. 1804656 (-)
RNA-Seq Expression	Csor.00g053930
Synteny	Csor.00g053930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACATCCACGCCATCGTCGTCATCAACAGCATCTAAAAGTTGGATCAGAAATCTTTCATCAATTGCTTCTCGCATCTATTTCTTCCTCATCATTCTCCAGATCCCGCTCTTCAGGTGTGTTTTCAGTTTCTTTACCTTTTTTTTGCACTTCGACAGTTCATATGATTTAGTTACTCGGATGGTAGAACTGTTTAGCACTGAAACTCTTTAGTTAGTTTACTCTCTGCGGTTAGCGTTAAAGTTTTGAGGATTATGTGAGAGTCGTGGCTTGTAACTGTCACTCTGCTGTTTTCTCTTTGTTGATCTTTTTGTTTCTGTTGTATTTCTGTCCTATTTGATCAGACTTTTCCTGTGTTTGAATATCTGATTCTCAGAAACAAACGATCTGTGAAGATTGAATTTCCATAGCTTAACAGTTGACTGTCATTTAACGTGATGTTAGAGCAGGAGATTAGGGTTTAAATCACTTCCTGTCCATGTGAGTAGTTTATGTGTTGTTTTTTTTCTGTGAATTAAAACTAATGTTCGAGGACATACCGGAGGGGAGTGCTTGAGAATGGGATGAAAAGGTTGAATTGATTGAATTTTTGCCATTTCTTTTTTAATTGAATCTTCATGTATGCATTTTATTTGCTTGGTTTCATGCTTGTATCTTCGTTTAGTGATTTGCATATTGCAAGTGATTCCTCTGCGTGGGAATTAATGGAATGGCTGTGTTGAAAGAATGGACCTCAATAGAATCAATATGTAGTATTTGGCTTCTGTTTGAAAATTTTCCATTATCCTTATATCAATGACTGTTGATTTTTTTAACTCCTCTTAGTATCACTTTCATCATCATGTCCTCTGGATATGGTAAGGGAAACTGCCTAATATGGTTGTTTGCTGATATGCTTACGAATCTAGAAATAAACCTTGTGACAAAAAAGAAAATGAATGGCTGGATGTTCTTGCTTTATTTTACTCTTTGCTTCATCGGTTATTAGCTATATATTCCTTCCAACATTCCATACAACAACTTTCCAGTTTTTGGAGTTGTGACTCTTGGCTTGACAATACAATATTTCTTTTCTGCAAATCTTGAAAATCCATGTAGCCTTTGGTGTACGATGTATATGAGCATTACATAATTAAAATCCATGTCCTCTCAGGGTCCCATGCAGATCTGGCATGTGTACAACCCCTTTGCACGTGACTTCATCCCAGTTGATTGCAAGTGAAGTCTTTCCTGCACCCGTAGTTAAGGCACTTCTCTATCCTGGAGCAATTGTGAATGGCCTTGTCATGAATTTGACGGTGCCCAGCTGGAGTAGCTTGTTAGACGTCTATAACTTGACCAATATCAAGGAAGCCTCTGCTATGACTGATCTTCAACGCTTAGAGGTTCCTTTGCTTAACCTCCTTGTTTATTTTTCATTTCAATTTGTAGATTTAGATCTATTATGGTTCTATCTTGGATTCAAGCCCTTATTTTTGCCCGAGAAATGACTGGTTATTTTTAATTTTCTCAACATGGTTAGCTAACAAATACACTTCCTGGGGACCTGGAGTTTCCTTTTTGGGAATCATATGGGAATCTGATAGAACTCCTTTATTCATTCACATAGAGAAGCACATAGCTAAGGGAGAATTCAAGAGCTCCTTACCCCTCCTAAACACCAAGATTTTACCCAAAAAGTGCCCATTTGTTGTGCATATTCTAGACGCTCTCTGATTGCATACCCTTTCTGTCAATCCAACTAAGTAGTTACTTTTAGTCCCACTACATACATACATGCTAAACTCTAAGCCGATCCCTTACTCTCCTATGATTACTTACTATACTATCGGGATCTAGCACCACCCACAGCCCAAATAACAGACGAAGTAGGAATTGTGTATTTGCATTGCAAAGGCAGAGAAACGTACCATTGTTGCATCCACTGTAGATGCATGTTCCCGTCAAATTAGAACCTCCATGACTTTTGGGTCTGATTGTGAAGTTCCCAATGCCTCAGTTGTCTTCCCCACCAATACTATATAAGAAGAGAGACTTGCTGAAAACTCTGGAGAAGTTTTTCCAACATCCTTTCATAATTGGGAGACATGAAAACTGGGTGAACAACGACCATGTTTGCGAAAAACAGATGATAAGCTACTGAGCGAATATTCTCATTAACCTAAAGGGGACCAATGAATCTAGGAGCCAACTTAGGATTTGGATGCGTAACCAATGATTCTTGCAGATTTGGTTTTAACTTAAGATGCATTTGGTAGTTGACTGCAAATTGGACTTCTAGTAGCTTTCCAAGTTGTTGTCATACATTGCTGCTCTTACTGCAATTTCTCCTTCAAGACCTCGGACATGCCATATTTGTTTATTCACACGACCAGGTGCATTGCTAAGGGATAACTTGAGAATTCCTTATCCCTCCTAAACTCCTATTGAGAATTTCTTTGCATCATACGTACATGTATGTAGAATATTTATTGCGTTTCTGGTTAAGAAAATGTTTAGACCGATGAACCAATCATTTCACAGATGAATAAAAGTATTCCACCTTTGCCCTTAAAAGAAAAATAAACAGAACCCCATTCAAACCCTTCTTCTGTTACTTTTCTTCAGAGAGGGCTCGGTAATGCTTTGAATCAACTGGTAAATTAATAACTAGTTACTCAGACAGATGACTTGTCCTTCTACCCAGGTTCTTGCCGGAAGCTATTTTTCAGTGGCTGGAGCCTTTGTGGGTCTTTTGAAGCCCGGAAGGATGAGCATGTTTGGAAGTCTCTTGGTAATTTGGGGTCTTGTTAAGGAAGGAATCCTCGGAAAACCTGTGAACACAGATCCTGCCAAAGCTGTTTATGTTTATCCCACAATGATTATTGCCATGATCTGTGCTTTCTCTTCGGTCAAGTATGATCTGAAGAAGGTAGCAGCTAGAAGTGCCCCTGCTCGACCAATTGCAAAGCCTCTTCAAAGCTCATCAAAATCTAAGCTTAAGTGA

mRNA sequence

ATGGCAACATCCACGCCATCGTCGTCATCAACAGCATCTAAAAGTTGGATCAGAAATCTTTCATCAATTGCTTCTCGCATCTATTTCTTCCTCATCATTCTCCAGATCCCGCTCTTCAGGGTCCCATGCAGATCTGGCATGTGTACAACCCCTTTGCACGTGACTTCATCCCAGTTGATTGCAAGTGAAGTCTTTCCTGCACCCGTAGTTAAGGCACTTCTCTATCCTGGAGCAATTGTGAATGGCCTTGTCATGAATTTGACGGTGCCCAGCTGGAGTAGCTTGTTAGACGTCTATAACTTGACCAATATCAAGGAAGCCTCTGCTATGACTGATCTTCAACGCTTAGAGGTTCTTGCCGGAAGCTATTTTTCAGTGGCTGGAGCCTTTGTGGGTCTTTTGAAGCCCGGAAGGATGAGCATGTTTGGAAGTCTCTTGGTAATTTGGGGTCTTGTTAAGGAAGGAATCCTCGGAAAACCTGTGAACACAGATCCTGCCAAAGCTGTTTATGTTTATCCCACAATGATTATTGCCATGATCTGTGCTTTCTCTTCGGTCAAGTATGATCTGAAGAAGGTAGCAGCTAGAAGTGCCCCTGCTCGACCAATTGCAAAGCCTCTTCAAAGCTCATCAAAATCTAAGCTTAAGTGA

Coding sequence (CDS)

ATGGCAACATCCACGCCATCGTCGTCATCAACAGCATCTAAAAGTTGGATCAGAAATCTTTCATCAATTGCTTCTCGCATCTATTTCTTCCTCATCATTCTCCAGATCCCGCTCTTCAGGGTCCCATGCAGATCTGGCATGTGTACAACCCCTTTGCACGTGACTTCATCCCAGTTGATTGCAAGTGAAGTCTTTCCTGCACCCGTAGTTAAGGCACTTCTCTATCCTGGAGCAATTGTGAATGGCCTTGTCATGAATTTGACGGTGCCCAGCTGGAGTAGCTTGTTAGACGTCTATAACTTGACCAATATCAAGGAAGCCTCTGCTATGACTGATCTTCAACGCTTAGAGGTTCTTGCCGGAAGCTATTTTTCAGTGGCTGGAGCCTTTGTGGGTCTTTTGAAGCCCGGAAGGATGAGCATGTTTGGAAGTCTCTTGGTAATTTGGGGTCTTGTTAAGGAAGGAATCCTCGGAAAACCTGTGAACACAGATCCTGCCAAAGCTGTTTATGTTTATCCCACAATGATTATTGCCATGATCTGTGCTTTCTCTTCGGTCAAGTATGATCTGAAGAAGGTAGCAGCTAGAAGTGCCCCTGCTCGACCAATTGCAAAGCCTCTTCAAAGCTCATCAAAATCTAAGCTTAAGTGA

Protein sequence

MATSTPSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMICAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK

Homology

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BLAST of Csor.00g053930 vs. NCBI nr
Match: KAG6585460.1 (hypothetical protein SDJN03_18193, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020378.1 hypothetical protein SDJN02_17062 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 405 bits (1042), Expect = 3.23e-142
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MATSTPSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI 60
           MATSTPSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI
Sbjct: 1   MATSTPSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI 60

Query: 61  ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA 120
           ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA
Sbjct: 61  ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA 120

Query: 121 GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI 180
           GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI
Sbjct: 121 GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI 180

Query: 181 CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK 216
           CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK
Sbjct: 181 CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK 216

[Close]

BLAST of Csor.00g053930 vs. NCBI nr
Match: XP_022951967.1 (uncharacterized protein LOC111454694 [Cucurbita moschata])

HSP 1 Score: 400 bits (1027), Expect = 6.24e-140
Identity = 213/216 (98.61%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MATSTPSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI 60
           MATS PSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI
Sbjct: 1   MATSMPSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI 60

Query: 61  ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA 120
           ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLT+IKEASAMTDLQRLEVLA
Sbjct: 61  ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTDIKEASAMTDLQRLEVLA 120

Query: 121 GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI 180
           GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAK VYVYPTMIIAMI
Sbjct: 121 GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKTVYVYPTMIIAMI 180

Query: 181 CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK 216
           CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK
Sbjct: 181 CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK 216

[Close]

BLAST of Csor.00g053930 vs. NCBI nr
Match: XP_023538499.1 (uncharacterized protein LOC111799258 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 395 bits (1016), Expect = 2.66e-138
Identity = 212/216 (98.15%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MATSTPSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI 60
           MATSTPSSSS   KSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI
Sbjct: 1   MATSTPSSSS---KSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI 60

Query: 61  ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA 120
           ASEVFPAPVVKALLYPGAIVNGL+MNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA
Sbjct: 61  ASEVFPAPVVKALLYPGAIVNGLIMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA 120

Query: 121 GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI 180
           GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI
Sbjct: 121 GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI 180

Query: 181 CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK 216
           CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK
Sbjct: 181 CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK 213

[Close]

BLAST of Csor.00g053930 vs. NCBI nr
Match: XP_023002496.1 (uncharacterized protein LOC111496320 [Cucurbita maxima])

HSP 1 Score: 395 bits (1015), Expect = 4.06e-138
Identity = 213/216 (98.61%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MATSTPSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI 60
           M TST SSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI
Sbjct: 1   MVTSTQSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI 60

Query: 61  ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA 120
           ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA
Sbjct: 61  ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA 120

Query: 121 GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI 180
           GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI
Sbjct: 121 GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI 180

Query: 181 CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK 216
           CAFSSVKYDLKKVA RSAPARPIAKPLQSSSKSKLK
Sbjct: 181 CAFSSVKYDLKKVA-RSAPARPIAKPLQSSSKSKLK 215

[Close]

BLAST of Csor.00g053930 vs. NCBI nr
Match: XP_038883986.1 (uncharacterized protein LOC120074948 [Benincasa hispida])

HSP 1 Score: 379 bits (973), Expect = 1.02e-131
Identity = 200/216 (92.59%), Postives = 210/216 (97.22%), Query Frame = 0


Query: 1   MATSTPSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI 60
           MATST SS+S ASKSWIRNLSSIASRIYFFLIILQIPLFR+PCRSGMCTTPLHVTSSQLI
Sbjct: 1   MATSTLSSTSAASKSWIRNLSSIASRIYFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLI 60

Query: 61  ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA 120
           ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSW++L D+YNLTNIKEASA+TDLQRLEVLA
Sbjct: 61  ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWNNLFDIYNLTNIKEASAVTDLQRLEVLA 120

Query: 121 GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI 180
           GSYFSVAGAFVGLLKPGRMSMFG+LLVIWGLVKEGILGKPVNTDPAKAVYVYPTMI+A+I
Sbjct: 121 GSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMILAVI 180

Query: 181 CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK 216
           CAFSSVKYD+KKV  R APARPIAKPLQSSSKSKLK
Sbjct: 181 CAFSSVKYDVKKVV-RGAPARPIAKPLQSSSKSKLK 215

[Close]

BLAST of Csor.00g053930 vs. ExPASy TrEMBL
Match: A0A6J1GJ36 (uncharacterized protein LOC111454694 OS=Cucurbita moschata OX=3662 GN=LOC111454694 PE=4 SV=1)

HSP 1 Score: 400 bits (1027), Expect = 3.02e-140
Identity = 213/216 (98.61%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MATSTPSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI 60
           MATS PSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI
Sbjct: 1   MATSMPSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI 60

Query: 61  ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA 120
           ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLT+IKEASAMTDLQRLEVLA
Sbjct: 61  ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTDIKEASAMTDLQRLEVLA 120

Query: 121 GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI 180
           GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAK VYVYPTMIIAMI
Sbjct: 121 GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKTVYVYPTMIIAMI 180

Query: 181 CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK 216
           CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK
Sbjct: 181 CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK 216

[Close]

BLAST of Csor.00g053930 vs. ExPASy TrEMBL
Match: A0A6J1KLG8 (uncharacterized protein LOC111496320 OS=Cucurbita maxima OX=3661 GN=LOC111496320 PE=4 SV=1)

HSP 1 Score: 395 bits (1015), Expect = 1.97e-138
Identity = 213/216 (98.61%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MATSTPSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI 60
           M TST SSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI
Sbjct: 1   MVTSTQSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI 60

Query: 61  ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA 120
           ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA
Sbjct: 61  ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA 120

Query: 121 GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI 180
           GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI
Sbjct: 121 GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI 180

Query: 181 CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK 216
           CAFSSVKYDLKKVA RSAPARPIAKPLQSSSKSKLK
Sbjct: 181 CAFSSVKYDLKKVA-RSAPARPIAKPLQSSSKSKLK 215

[Close]

BLAST of Csor.00g053930 vs. ExPASy TrEMBL
Match: A0A1S3BCZ0 (uncharacterized protein LOC103488297 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103488297 PE=4 SV=1)

HSP 1 Score: 377 bits (969), Expect = 2.02e-131
Identity = 197/216 (91.20%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 1   MATSTPSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI 60
           MATSTPSS+STASKSW+RNLSSIASR+YF LIILQIPLFR+ CRSGMCTTPLHVTSSQLI
Sbjct: 1   MATSTPSSTSTASKSWVRNLSSIASRVYFLLIILQIPLFRISCRSGMCTTPLHVTSSQLI 60

Query: 61  ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA 120
           ASEVFPAPVVKALLYPGA+VNGLVMNLTVPSWS L D+YNLTNIKEASA+TDLQRLEVLA
Sbjct: 61  ASEVFPAPVVKALLYPGAVVNGLVMNLTVPSWSDLFDIYNLTNIKEASAVTDLQRLEVLA 120

Query: 121 GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI 180
           GSYFSVAGAFVGLLKPGRMSMFG+LLVIWGLVKEGILGKPVNTDP KAVYVYPTMI+A+I
Sbjct: 121 GSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPVKAVYVYPTMILAVI 180

Query: 181 CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK 216
           CAFSSVKYD+KKV  R APARPIAKPLQSSSKSKLK
Sbjct: 181 CAFSSVKYDVKKVV-RGAPARPIAKPLQSSSKSKLK 215

[Close]

BLAST of Csor.00g053930 vs. ExPASy TrEMBL
Match: A0A5A7VF29 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002540 PE=4 SV=1)

HSP 1 Score: 377 bits (969), Expect = 2.02e-131
Identity = 197/216 (91.20%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 1   MATSTPSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI 60
           MATSTPSS+STASKSW+RNLSSIASR+YF LIILQIPLFR+ CRSGMCTTPLHVTSSQLI
Sbjct: 1   MATSTPSSTSTASKSWVRNLSSIASRVYFLLIILQIPLFRISCRSGMCTTPLHVTSSQLI 60

Query: 61  ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA 120
           ASEVFPAPVVKALLYPGA+VNGLVMNLTVPSWS L D+YNLTNIKEASA+TDLQRLEVLA
Sbjct: 61  ASEVFPAPVVKALLYPGAVVNGLVMNLTVPSWSDLFDIYNLTNIKEASAVTDLQRLEVLA 120

Query: 121 GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI 180
           GSYFSVAGAFVGLLKPGRMSMFG+LLVIWGLVKEGILGKPVNTDP KAVYVYPTMI+A+I
Sbjct: 121 GSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPVKAVYVYPTMILAVI 180

Query: 181 CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK 216
           CAFSSVKYD+KKV  R APARPIAKPLQSSSKSKLK
Sbjct: 181 CAFSSVKYDVKKVV-RGAPARPIAKPLQSSSKSKLK 215

[Close]

BLAST of Csor.00g053930 vs. ExPASy TrEMBL
Match: A0A1S4DVJ9 (uncharacterized protein LOC103488297 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103488297 PE=4 SV=1)

HSP 1 Score: 377 bits (969), Expect = 2.09e-131
Identity = 197/216 (91.20%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 1   MATSTPSSSSTASKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLI 60
           MATSTPSS+STASKSW+RNLSSIASR+YF LIILQIPLFR+ CRSGMCTTPLHVTSSQLI
Sbjct: 1   MATSTPSSTSTASKSWVRNLSSIASRVYFLLIILQIPLFRISCRSGMCTTPLHVTSSQLI 60

Query: 61  ASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLA 120
           ASEVFPAPVVKALLYPGA+VNGLVMNLTVPSWS L D+YNLTNIKEASA+TDLQRLEVLA
Sbjct: 61  ASEVFPAPVVKALLYPGAVVNGLVMNLTVPSWSDLFDIYNLTNIKEASAVTDLQRLEVLA 120

Query: 121 GSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMI 180
           GSYFSVAGAFVGLLKPGRMSMFG+LLVIWGLVKEGILGKPVNTDP KAVYVYPTMI+A+I
Sbjct: 121 GSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPVKAVYVYPTMILAVI 180

Query: 181 CAFSSVKYDLKKVAARSAPARPIAKPLQSSSKSKLK 216
           CAFSSVKYD+KKV  R APARPIAKPLQSSSKSKLK
Sbjct: 181 CAFSSVKYDVKKVV-RGAPARPIAKPLQSSSKSKLK 215

[Close]

BLAST of Csor.00g053930 vs. TAIR 10
Match: AT5G11280.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 330.9 bits (847), Expect = 7.8e-91
Identity = 161/204 (78.92%), Postives = 188/204 (92.16%), Query Frame = 0


Query: 13  SKSWIRNLSSIASRIYFFLIILQIPLFRVPCRSGMCTTPLHVTSSQLIASEVFPAPVVKA 72
           SK WI+  +S+AS +YF LI+ QIPLFRVPCRSGMC++P+HVTSSQLI+SE+FP P++KA
Sbjct: 7   SKGWIKKWTSMASSVYFVLILFQIPLFRVPCRSGMCSSPIHVTSSQLISSEIFPVPMIKA 66

Query: 73  LLYPGAIVNGLVMNLTVPSWSSLLDVYNLTNIKEASAMTDLQRLEVLAGSYFSVAGAFVG 132
           LLYPGA+VNGL +N+T P W ++LD+YNLTN+KEASA+TDLQRLEVLAGSYFSVAGAFVG
Sbjct: 67  LLYPGAVVNGLAINMTFPKWENVLDIYNLTNVKEASAVTDLQRLEVLAGSYFSVAGAFVG 126

Query: 133 LLKPGRMSMFGSLLVIWGLVKEGILGKPVNTDPAKAVYVYPTMIIAMICAFSSVKYDLKK 192
           LLKPGRMSMFGSLL++WGLVKEGILGKPVNTDPAK VYVYPTM++AMICAFS +KYDL+K
Sbjct: 127 LLKPGRMSMFGSLLLVWGLVKEGILGKPVNTDPAKTVYVYPTMVLAMICAFSMIKYDLRK 186

Query: 193 VAARSAPARPIAKPLQSSSKSKLK 217
            A R+APARPIAKPL SSSKSKLK
Sbjct: 187 -ATRAAPARPIAKPLMSSSKSKLK 209

[Close]

BLAST of Csor.00g053930 vs. TAIR 10
Match: AT1G80200.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11280.1); Has 49 Blast hits to 49 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 124.4 bits (311), Expect = 1.1e-28
Identity = 75/215 (34.88%), Postives = 115/215 (53.49%), Query Frame = 0


Query: 12  ASKSWIRNLSSIASRIYFFLIILQIPLFR-----------------------------VP 71
           + K W   +S IAS ++  LI+ QIPLFR                             V 
Sbjct: 4   SKKKWASIISVIASSLFSLLIVFQIPLFRVTLFNNAGALLDLDDRKKTDSILLGIEEIVA 63

Query: 72  CRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSSLLDVYNLT 131
           CR+  C TPL V SS+LIA+++ P+ +VK LLYPGAI   L     +PS+  L   Y+  
Sbjct: 64  CRNKSCETPLEVISSELIATDLIPSSLVKTLLYPGAITKSLFAGSKIPSYHHLFQFYSFD 123

Query: 132 NI-KEASAMTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGSLLVIWGLVKEGILGKPV 191
            + + +S  TD+  LEV AGS   + GA + L KP R++  G+LL+ WGL+++ +L    
Sbjct: 124 GMYRTSSFATDIHHLEVFAGSCLCLLGALLNLFKPTRITFIGTLLISWGLIRDILLLDSA 183

Query: 192 N---TDPAKAVYVYPTMIIAMICAFSSVKYDLKKV 194
           +   +    +V VYPT+ +A + AF S++ D++K+
Sbjct: 184 HDWISPHRNSVRVYPTLFLASLSAFLSMRSDVRKI 218

The following BLAST results are available for this feature:

BLAST of Csor.00g053930 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g053930 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6585460.1	3.23e-142	100.00	hypothetical protein SDJN03_18193, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022951967.1	6.24e-140	98.61	uncharacterized protein LOC111454694 [Cucurbita moschata]	[more]
XP_023538499.1	2.66e-138	98.15	uncharacterized protein LOC111799258 [Cucurbita pepo subsp. pepo]	[more]
XP_023002496.1	4.06e-138	98.61	uncharacterized protein LOC111496320 [Cucurbita maxima]	[more]
XP_038883986.1	1.02e-131	92.59	uncharacterized protein LOC120074948 [Benincasa hispida]	[more]

BLAST of Csor.00g053930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GJ36	3.02e-140	98.61	uncharacterized protein LOC111454694 OS=Cucurbita moschata OX=3662 GN=LOC1114546...	[more]
A0A6J1KLG8	1.97e-138	98.61	uncharacterized protein LOC111496320 OS=Cucurbita maxima OX=3661 GN=LOC111496320...	[more]
A0A1S3BCZ0	2.02e-131	91.20	uncharacterized protein LOC103488297 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7VF29	2.02e-131	91.20	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S4DVJ9	2.09e-131	91.20	uncharacterized protein LOC103488297 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Csor.00g053930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11280.1	7.8e-91	78.92	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G80200.1	1.1e-28	34.88	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35288	TAIL FIBER	coord: 13..216
None	No IPR available	PANTHER	PTHR35288:SF1	TAIL FIBER	coord: 13..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g053930.m01	Csor.00g053930.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane