Csor.00g053560 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g053560
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Poly(A)-specific ribonuclease
Location	Csor_Chr12: 1958291 .. 1959613 (-)
RNA-Seq Expression	Csor.00g053560
Synteny	Csor.00g053560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGATTTTACCCAAAGGCGATTCGATTCAAATCCGTGAGGTCTGGGATGCCAATTTAGAAGAGGAGTTTGCGCTTATCCGTGAAATTGTTGATGAGTTTAATTACATAGCCATGGATACTGAGTTCCCCGGCGTTGTGCTTCGACCGCTTGGTGCTTTCAAGAATATCAACGACTACAACTACCAAACTCTCAAGAGTAATGTTGATACTTTGAAGTTGATTCAATTGGGTCTTACGTTTTCTGATGAGAATGGAAATCTTCCAACTTGTGGAACGGATAAGTTTTGCATTTGGCAGTTCAATTTCCGTGAGTTCAATACTATTAATGATATTTTTGCTAGTGATTCCATTGAACTTCTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAACGAAGAGGGTATCGATGTTAATCGATTTGGCGAGCTTCTAATGTCTTCTGGGGTTGTGTTGAACAATGATGTTATCTGGGTTACGTTCCACAGCGGGTATGATTTTGGTTACTTGCTGAAGTTGCTGACTTGCCGAGCCTTACCCGAAACGCAGGCCGGGTTTTTTGAGCTCATCAAGATCTATTTTCCAGTGCTCTATGATATCAAGCATTTGATGAAGTTCTGCAACAGTCTCCATGGTGGGTTGAACAAACTTGCAGAATTACTAGAAGTGGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTTTGCTCACTGCTTGTACTTTTAGGAAGTTGAGGGGCACCTTTTTCAATGGTTCTACGCAGAAATACGCAGGTGTTTTATACGGTCTCGGTGTCGAAGATGAATAGCGTACTACTAGAACTAATTGAAGAGAATTACCAAGTATTTGTAGAAGTGTGAGTCTGTTAGTTACTTTTGTACAATTTGGCTAAAGCATTGATGATTGTAACTATTTCCCGCTTTCCTGCTCTGTAATAGAAACCTTCGACTGTTTTTTGCAGCTTGTGGTTTCTTGTAAATTATGGCAGTTTAGTGTTTCAATAAAATCTTAATGACGTTTCTTTGTTGAGTCTTCACCTGTTTCCATTGTCGAATCAGACCTGAATCTGATAGGATCCATCAGGCTGTCATAATAGACACAATTTTGGTTTCTGGGTTTGATTGTTCTGTTCTTGATTGTCTTGTTGTAGAACATTTGCAGCCTGTTCATCCGTGTGTTTTGAGGTATCCCTGTAGCTAACGTTTCTGATTGCTGGTATTGTTGCAGAGTTTAGAGGTATGCATGGAATAACATTGGTTCATTTTCTTTTTGGACTTTATTCAGGCACGAAACCAAGACGAATCTCGGGCTCGGATAA

mRNA sequence

ATGTCGATTTTACCCAAAGGCGATTCGATTCAAATCCGTGAGGTCTGGGATGCCAATTTAGAAGAGGAGTTTGCGCTTATCCGTGAAATTGTTGATGAGTTTAATTACATAGCCATGGATACTGAGTTCCCCGGCGTTGTGCTTCGACCGCTTGGTGCTTTCAAGAATATCAACGACTACAACTACCAAACTCTCAAGAGTAATGTTGATACTTTGAAGTTGATTCAATTGGGTCTTACGTTTTCTGATGAGAATGGAAATCTTCCAACTTGTGGAACGGATAAGTTTTGCATTTGGCAGTTCAATTTCCGTGAGTTCAATACTATTAATGATATTTTTGCTAGTGATTCCATTGAACTTCTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAACGAAGAGGGTATCGATGTTAATCGATTTGGCGAGCTTCTAATGTCTTCTGGGGTTGTGTTGAACAATGATGTTATCTGGGTTACGTTCCACAGCGGGTATGATTTTGGTTACTTGCTGAAGTTGCTGACTTGCCGAGCCTTACCCGAAACGCAGGCCGGGTTTTTTGAGCTCATCAAGATCTATTTTCCAGTGCTCTATGATATCAAGCATTTGATGAAGTTCTGCAACAGTCTCCATGGTGGGTTGAACAAACTTGCAGAATTACTAGAAGTGGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTTTGCTCACTGCTTGTACTTTTAGGAAGTTGAGGGGCACCTTTTTCAATGGTTCTACGCAGAAATACGCAGAACATTTGCAGCCTGTTCATCCGTGTGTTTTGAGGCACGAAACCAAGACGAATCTCGGGCTCGGATAA

Coding sequence (CDS)

ATGTCGATTTTACCCAAAGGCGATTCGATTCAAATCCGTGAGGTCTGGGATGCCAATTTAGAAGAGGAGTTTGCGCTTATCCGTGAAATTGTTGATGAGTTTAATTACATAGCCATGGATACTGAGTTCCCCGGCGTTGTGCTTCGACCGCTTGGTGCTTTCAAGAATATCAACGACTACAACTACCAAACTCTCAAGAGTAATGTTGATACTTTGAAGTTGATTCAATTGGGTCTTACGTTTTCTGATGAGAATGGAAATCTTCCAACTTGTGGAACGGATAAGTTTTGCATTTGGCAGTTCAATTTCCGTGAGTTCAATACTATTAATGATATTTTTGCTAGTGATTCCATTGAACTTCTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAACGAAGAGGGTATCGATGTTAATCGATTTGGCGAGCTTCTAATGTCTTCTGGGGTTGTGTTGAACAATGATGTTATCTGGGTTACGTTCCACAGCGGGTATGATTTTGGTTACTTGCTGAAGTTGCTGACTTGCCGAGCCTTACCCGAAACGCAGGCCGGGTTTTTTGAGCTCATCAAGATCTATTTTCCAGTGCTCTATGATATCAAGCATTTGATGAAGTTCTGCAACAGTCTCCATGGTGGGTTGAACAAACTTGCAGAATTACTAGAAGTGGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTTTGCTCACTGCTTGTACTTTTAGGAAGTTGAGGGGCACCTTTTTCAATGGTTCTACGCAGAAATACGCAGAACATTTGCAGCCTGTTCATCCGTGTGTTTTGAGGCACGAAACCAAGACGAATCTCGGGCTCGGATAA

Protein sequence

MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAEHLQPVHPCVLRHETKTNLGLG

Homology

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BLAST of Csor.00g053560 vs. ExPASy Swiss-Prot
Match: Q9SKZ2 (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 419.1 bits (1076), Expect = 4.0e-116
Identity = 195/260 (75.00%), Postives = 227/260 (87.31%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MS+  K DSIQIREVW+ NLE E ALIRE+VD+F ++AMDTEFPG+V RP+G FK   +Y
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIWQFNFREFNTINDIFASDSIE 120
           +Y+TLK+NV+ LK+IQLGLTFSDE GNLPTCGTD K+CIWQFNFREF+  +DI+A+DSIE
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 121 LLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRAL 180
           LLRQ GIDF KNNE GID  RF ELLMSSG+VLN +V WVTFHSGYDFGYLLKLLTC+ L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 181 PETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           PETQ GFFE+I +YFP +YDIKHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

Query: 241 ACTFRKLRGTFFNGSTQKYA 260
           +CTFRKL+  FF GS +KY+
Sbjct: 241 SCTFRKLQENFFIGSMEKYS 260

[Close]

BLAST of Csor.00g053560 vs. ExPASy Swiss-Prot
Match: Q9SAI2 (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=CAF1-6 PE=1 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 2.4e-113
Identity = 188/259 (72.59%), Postives = 223/259 (86.10%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MS+  K DSIQIREVW+ NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G FK+  DY
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120
           +Y+TLK+NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF+  +DIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180
           L+Q GID  KN  +GID  RF ELLMSSG+VLN +V WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           ++Q  FF+LI +YFP +YDIKHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRGTFFNGSTQKYA 260
           CTFRKL+  FF G   KY+
Sbjct: 241 CTFRKLKENFFVGPLHKYS 259

[Close]

BLAST of Csor.00g053560 vs. ExPASy Swiss-Prot
Match: Q9LEU4 (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=CAF1-10 PE=2 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 4.1e-113
Identity = 191/253 (75.49%), Postives = 219/253 (86.56%), Query Frame = 0


Query: 6   KGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTL 65
           K DSI IREVWD NL EEFALIREIVD+F+YIAMDTEFPGVVL+P+  FK  ND NY+TL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 66  KSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIELLRQCG 125
           K NVD LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFREFN   DI+AS+SIELLRQCG
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 126 IDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAG 185
           IDF+KN E+GIDV RFGEL+MSSG+VLN+ + WVTFH GYDFGYL+KLLTC+ LP  QA 
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 186 FFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRK 245
           FF+L+ +YFP +YDIKHLM FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

Query: 246 LRGTFFNGSTQKY 259
           L+  +F GST+KY
Sbjct: 246 LKERYFPGSTEKY 258

[Close]

BLAST of Csor.00g053560 vs. ExPASy Swiss-Prot
Match: Q9S9P2 (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=CAF1-2 PE=1 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 6.2e-93
Identity = 164/261 (62.84%), Postives = 204/261 (78.16%), Query Frame = 0


Query: 8   DSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNIN------DYN 67
           D+I+IREVW+ NLE+E ALI + +D+F Y+AMDTEFPG+V + + A  N N      +YN
Sbjct: 12  DTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYN 71

Query: 68  YQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIELL 127
           Y TLK+NV+ LKLIQLGLT SDE GNLPTCGT+K CIWQFNFREFN I+D+FA DSIELL
Sbjct: 72  YDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELL 131

Query: 128 RQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPE 187
           R+  ID +KNNE G+D  RF ELLM SGVVLN+ + WVTFH GYDFGYLLKLL+ + LPE
Sbjct: 132 RKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPE 191

Query: 188 TQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTAC 247
             + FF+ ++ +FPV+YDIK+LM FC +L+GGL K+AELL V+R+G+ HQAGSDSLLT  
Sbjct: 192 EISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTLR 251

Query: 248 TFRKLRGTFFNGSTQKYAEHL 263
           TF K++  FF GS  KY+  L
Sbjct: 252 TFIKMKEFFFTGSLLKYSGFL 272

[Close]

BLAST of Csor.00g053560 vs. ExPASy Swiss-Prot
Match: Q3ZC01 (CCR4-NOT transcription complex subunit 7 OS=Bos taurus OX=9913 GN=CNOT7 PE=2 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 6.2e-77
Identity = 144/256 (56.25%), Postives = 183/256 (71.48%), Query Frame = 0


Query: 9   SIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSN 68
           S +I EVW  NL+EE   IR+++ ++NY+AMDTEFPGVV RP+G F++  DY YQ L+ N
Sbjct: 9   SQRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCN 68

Query: 69  VDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIELLRQCGIDF 128
           VD LK+IQLGLTF +E G  P  GT     WQFNF+ FN   D++A DSIELL   GI F
Sbjct: 69  VDLLKIIQLGLTFMNEQGEYPP-GTS---TWQFNFK-FNLTEDMYAQDSIELLTTSGIQF 128

Query: 129 QKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFE 188
           +K+ EEGI+   F ELLM+SGVVL   V W++FHSGYDFGYL+K+LT   LPE +  FFE
Sbjct: 129 KKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFE 188

Query: 189 LIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRG 248
           +++++FPV+YD+K+LMK C +L GGL ++AE LE+ERIG  HQAGSDSLLT   F K+R 
Sbjct: 189 ILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMRE 248

Query: 249 TFFNG--STQKYAEHL 263
            FF       KY  HL
Sbjct: 249 MFFEDHIDDAKYCGHL 259

[Close]

BLAST of Csor.00g053560 vs. NCBI nr
Match: KAG6585497.1 (putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 585 bits (1508), Expect = 4.36e-211
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY
Sbjct: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120
           NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL
Sbjct: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180

Query: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRGTFFNGSTQKYAEHLQPVHPCVLRHETKTNLGLG 281
           CTFRKLRGTFFNGSTQKYAEHLQPVHPCVLRHETKTNLGLG
Sbjct: 241 CTFRKLRGTFFNGSTQKYAEHLQPVHPCVLRHETKTNLGLG 281

[Close]

BLAST of Csor.00g053560 vs. NCBI nr
Match: XP_022951691.1 (probable CCR4-associated factor 1 homolog 7 [Cucurbita moschata] >XP_023002468.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita maxima] >XP_023537992.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 537 bits (1383), Expect = 3.31e-192
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY
Sbjct: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120
           NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL
Sbjct: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180

Query: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRGTFFNGSTQKYA 259
           CTFRKLRGTFFNGSTQKYA
Sbjct: 241 CTFRKLRGTFFNGSTQKYA 259

[Close]

BLAST of Csor.00g053560 vs. NCBI nr
Match: KAG7020412.1 (putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 537 bits (1383), Expect = 4.19e-188
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY
Sbjct: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120
           NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL
Sbjct: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180

Query: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRGTFFNGSTQKYA 259
           CTFRKLRGTFFNGSTQKYA
Sbjct: 241 CTFRKLRGTFFNGSTQKYA 259

[Close]

BLAST of Csor.00g053560 vs. NCBI nr
Match: XP_038885551.1 (probable CCR4-associated factor 1 homolog 7 [Benincasa hispida])

HSP 1 Score: 506 bits (1302), Expect = 8.53e-180
Identity = 243/259 (93.82%), Postives = 248/259 (95.75%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSILPKGDSIQIREVW+ANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNIND+
Sbjct: 1   MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDF 60

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120
           NY+TLK NVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFN  NDIFASDSIEL
Sbjct: 61  NYRTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGNDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDV WVTFHSGYDFGYLLKLLTCR LP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVNWVTFHSGYDFGYLLKLLTCRGLP 180

Query: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
             QAGFFELI +YFPV+YDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRGTFFNGSTQKYA 259
           CTFRKLR TFFNGS QKYA
Sbjct: 241 CTFRKLRDTFFNGSIQKYA 259

[Close]

BLAST of Csor.00g053560 vs. NCBI nr
Match: XP_022132308.1 (probable CCR4-associated factor 1 homolog 7 [Momordica charantia])

HSP 1 Score: 500 bits (1287), Expect = 1.65e-177
Identity = 239/259 (92.28%), Postives = 248/259 (95.75%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSILPKGDSIQIREVW+ NLEEEFALIREIVDEFNYIAMDTEFPGVVLRP+GAFKNINDY
Sbjct: 1   MSILPKGDSIQIREVWNDNLEEEFALIREIVDEFNYIAMDTEFPGVVLRPVGAFKNINDY 60

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120
           NYQTLK NVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFN   DIFASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNVSEDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180
           LRQCGIDF+KNNEEGIDVNRFGELLMSSGVVLN+ V WVTFHSGYDFGYLLKLLTCR LP
Sbjct: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRTLP 180

Query: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           +TQAGFF+LI IYFP++YDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 DTQAGFFDLINIYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRGTFFNGSTQKYA 259
           CTFRKLR TFFNGST+KYA
Sbjct: 241 CTFRKLRDTFFNGSTKKYA 259

[Close]

BLAST of Csor.00g053560 vs. ExPASy TrEMBL
Match: A0A6J1KTM7 (Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111496297 PE=3 SV=1)

HSP 1 Score: 537 bits (1383), Expect = 1.60e-192
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY
Sbjct: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120
           NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL
Sbjct: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180

Query: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRGTFFNGSTQKYA 259
           CTFRKLRGTFFNGSTQKYA
Sbjct: 241 CTFRKLRGTFFNGSTQKYA 259

[Close]

BLAST of Csor.00g053560 vs. ExPASy TrEMBL
Match: A0A6J1GI81 (Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111454440 PE=3 SV=1)

HSP 1 Score: 537 bits (1383), Expect = 1.60e-192
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY
Sbjct: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120
           NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL
Sbjct: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180

Query: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRGTFFNGSTQKYA 259
           CTFRKLRGTFFNGSTQKYA
Sbjct: 241 CTFRKLRGTFFNGSTQKYA 259

[Close]

BLAST of Csor.00g053560 vs. ExPASy TrEMBL
Match: A0A6J1BVW9 (Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111005192 PE=3 SV=1)

HSP 1 Score: 500 bits (1287), Expect = 7.98e-178
Identity = 239/259 (92.28%), Postives = 248/259 (95.75%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSILPKGDSIQIREVW+ NLEEEFALIREIVDEFNYIAMDTEFPGVVLRP+GAFKNINDY
Sbjct: 1   MSILPKGDSIQIREVWNDNLEEEFALIREIVDEFNYIAMDTEFPGVVLRPVGAFKNINDY 60

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120
           NYQTLK NVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFN   DIFASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNVSEDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180
           LRQCGIDF+KNNEEGIDVNRFGELLMSSGVVLN+ V WVTFHSGYDFGYLLKLLTCR LP
Sbjct: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRTLP 180

Query: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           +TQAGFF+LI IYFP++YDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 DTQAGFFDLINIYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRGTFFNGSTQKYA 259
           CTFRKLR TFFNGST+KYA
Sbjct: 241 CTFRKLRDTFFNGSTKKYA 259

[Close]

BLAST of Csor.00g053560 vs. ExPASy TrEMBL
Match: A0A6J1HCG0 (Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111462726 PE=3 SV=1)

HSP 1 Score: 496 bits (1276), Expect = 3.79e-176
Identity = 238/259 (91.89%), Postives = 245/259 (94.59%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSILPKGDSIQIREVW+ NLEEEFALIREIVD+FNYIAMDTEFPGVVLRPLGAFKNINDY
Sbjct: 1   MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDY 60

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120
           NYQTLK NVD LKLIQLGLTFSDENGNLPTCGTD FCIWQFNFREFN ++DIFASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQFNFREFNIVSDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN DV WVTFHSGYDFGYLLKLLTCR LP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLP 180

Query: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           E Q GFF+LI +YFPV+YDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 EKQDGFFDLINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRGTFFNGSTQKYA 259
            TFRKLR TFFNGS QKYA
Sbjct: 241 STFRKLRNTFFNGSIQKYA 259

[Close]

BLAST of Csor.00g053560 vs. ExPASy TrEMBL
Match: A0A0A0LMH2 (Poly(A)-specific ribonuclease OS=Cucumis sativus OX=3659 GN=Csa_2G382610 PE=3 SV=1)

HSP 1 Score: 494 bits (1272), Expect = 1.54e-175
Identity = 237/259 (91.51%), Postives = 246/259 (94.98%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSILPKGDSIQIREVW+ANLEEEFALIR IVD+FNYIAMDTEFPGVVLRPLG FKNIND+
Sbjct: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120
           NY+TLK NV+ LKLIQLGLTFSDE+GNLPTCGTDKFCIWQFNFREFN  +DIFASDSIEL
Sbjct: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN+DV WVTFHSGYDFGYLLKLLTCR LP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180

Query: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
             QAGFFELI +YFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRGTFFNGSTQKYA 259
           CTFRKLR TFFNGS QKYA
Sbjct: 241 CTFRKLRDTFFNGSIQKYA 259

[Close]

BLAST of Csor.00g053560 vs. TAIR 10
Match: AT2G32070.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 419.1 bits (1076), Expect = 2.8e-117
Identity = 195/260 (75.00%), Postives = 227/260 (87.31%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MS+  K DSIQIREVW+ NLE E ALIRE+VD+F ++AMDTEFPG+V RP+G FK   +Y
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIWQFNFREFNTINDIFASDSIE 120
           +Y+TLK+NV+ LK+IQLGLTFSDE GNLPTCGTD K+CIWQFNFREF+  +DI+A+DSIE
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 121 LLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRAL 180
           LLRQ GIDF KNNE GID  RF ELLMSSG+VLN +V WVTFHSGYDFGYLLKLLTC+ L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 181 PETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           PETQ GFFE+I +YFP +YDIKHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

Query: 241 ACTFRKLRGTFFNGSTQKYA 260
           +CTFRKL+  FF GS +KY+
Sbjct: 241 SCTFRKLQENFFIGSMEKYS 260

[Close]

BLAST of Csor.00g053560 vs. TAIR 10
Match: AT1G80780.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 409.8 bits (1052), Expect = 1.7e-114
Identity = 188/259 (72.59%), Postives = 223/259 (86.10%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MS+  K DSIQIREVW+ NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G FK+  DY
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120
           +Y+TLK+NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF+  +DIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180
           L+Q GID  KN  +GID  RF ELLMSSG+VLN +V WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           ++Q  FF+LI +YFP +YDIKHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRGTFFNGSTQKYA 260
           CTFRKL+  FF G   KY+
Sbjct: 241 CTFRKLKENFFVGPLHKYS 259

[Close]

BLAST of Csor.00g053560 vs. TAIR 10
Match: AT1G80780.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 409.8 bits (1052), Expect = 1.7e-114
Identity = 188/259 (72.59%), Postives = 223/259 (86.10%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MS+  K DSIQIREVW+ NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G FK+  DY
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120
           +Y+TLK+NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF+  +DIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180
           L+Q GID  KN  +GID  RF ELLMSSG+VLN +V WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           ++Q  FF+LI +YFP +YDIKHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRGTFFNGSTQKYA 260
           CTFRKL+  FF G   KY+
Sbjct: 241 CTFRKLKENFFVGPLHKYS 259

[Close]

BLAST of Csor.00g053560 vs. TAIR 10
Match: AT1G80780.3 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 409.8 bits (1052), Expect = 1.7e-114
Identity = 188/259 (72.59%), Postives = 223/259 (86.10%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MS+  K DSIQIREVW+ NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G FK+  DY
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120
           +Y+TLK+NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF+  +DIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180
           L+Q GID  KN  +GID  RF ELLMSSG+VLN +V WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           ++Q  FF+LI +YFP +YDIKHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRGTFFNGSTQKYA 260
           CTFRKL+  FF G   KY+
Sbjct: 241 CTFRKLKENFFVGPLHKYS 259

[Close]

BLAST of Csor.00g053560 vs. TAIR 10
Match: AT5G10960.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 409.1 bits (1050), Expect = 2.9e-114
Identity = 191/253 (75.49%), Postives = 219/253 (86.56%), Query Frame = 0


Query: 6   KGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTL 65
           K DSI IREVWD NL EEFALIREIVD+F+YIAMDTEFPGVVL+P+  FK  ND NY+TL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 66  KSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIELLRQCG 125
           K NVD LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFREFN   DI+AS+SIELLRQCG
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 126 IDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAG 185
           IDF+KN E+GIDV RFGEL+MSSG+VLN+ + WVTFH GYDFGYL+KLLTC+ LP  QA 
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 186 FFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRK 245
           FF+L+ +YFP +YDIKHLM FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

Query: 246 LRGTFFNGSTQKY 259
           L+  +F GST+KY
Sbjct: 246 LKERYFPGSTEKY 258

The following BLAST results are available for this feature:

BLAST of Csor.00g053560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKZ2	4.0e-116	75.00	Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9SAI2	2.4e-113	72.59	Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9LEU4	4.1e-113	75.49	Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9S9P2	6.2e-93	62.84	Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q3ZC01	6.2e-77	56.25	CCR4-NOT transcription complex subunit 7 OS=Bos taurus OX=9913 GN=CNOT7 PE=2 SV=...	[more]

BLAST of Csor.00g053560 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6585497.1	4.36e-211	100.00	putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp....	[more]
XP_022951691.1	3.31e-192	100.00	probable CCR4-associated factor 1 homolog 7 [Cucurbita moschata] >XP_023002468.1...	[more]
KAG7020412.1	4.19e-188	100.00	putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp....	[more]
XP_038885551.1	8.53e-180	93.82	probable CCR4-associated factor 1 homolog 7 [Benincasa hispida]	[more]
XP_022132308.1	1.65e-177	92.28	probable CCR4-associated factor 1 homolog 7 [Momordica charantia]	[more]

BLAST of Csor.00g053560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KTM7	1.60e-192	100.00	Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111496297 PE=3 S...	[more]
A0A6J1GI81	1.60e-192	100.00	Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111454440 PE=3...	[more]
A0A6J1BVW9	7.98e-178	92.28	Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111005192 PE=...	[more]
A0A6J1HCG0	3.79e-176	91.89	Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111462726 PE=3...	[more]
A0A0A0LMH2	1.54e-175	91.51	Poly(A)-specific ribonuclease OS=Cucumis sativus OX=3659 GN=Csa_2G382610 PE=3 SV...	[more]

BLAST of Csor.00g053560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32070.1	2.8e-117	75.00	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.1	1.7e-114	72.59	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.2	1.7e-114	72.59	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.3	1.7e-114	72.59	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G10960.1	2.9e-114	75.49	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 15..136 e-value: 8.3E-12 score: 45.0
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 160..243 e-value: 1.6E-5 score: 24.4
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 2..266 e-value: 4.0E-96 score: 323.3
IPR039637	CCR4-NOT transcription complex subunit 7/8/Pop2	PANTHER	PTHR10797	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	coord: 1..262
None	No IPR available	PANTHER	PTHR10797:SF68	CCR4-ASSOCIATED FACTOR 1 HOMOLOG 10-RELATED	coord: 1..262
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 12..256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g053560.m01	Csor.00g053560.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043928	exonucleolytic catabolism of deadenylated mRNA
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component	GO:0030015	CCR4-NOT core complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000932	P-body
cellular_component	GO:0030014	CCR4-NOT complex
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity