Csor.00g052670 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g052670
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	CBS domain-containing protein CBSX3, mitochondrial-like
Location	Csor_Chr12: 2551715 .. 2552684 (-)
RNA-Seq Expression	Csor.00g052670
Synteny	Csor.00g052670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGTGATCGTAAGAGCAGTACGATCGTGGCAAGAGACGCTGAAGATCGCTATCTCGCAGCACTCGTGCAGGAGAGAAACGAATCAAGTGGAGAAGCTTTTCGAAGGATCCAACTTAGGAGCTTCATCTTCTATACTGAAAGGTTTGGAGAACATTTTGGTGGCGGAGATCGTTTCGAGTAAGGGAGATGGAAGTATTGGCTCCCCTTGGCTATCCTGTCGAGCCAATGACACCGCCATTGATGCCGTGCAAAACGTAGCGAGTTCGGTTCAGTTCACATTACCAAAAGCTTGAAAGGTTTATCTCTGAAGATTGAGGACTCTTTTTGTGTTGATGCAGATGGCTAGAAACAATATTGGATCGTTGGTGGTGCTGAAGCCTGAAGGACAACACATTGCTGGAATTGTAACAGAACGAGGTAAATCAAACGCCAAACAAATTCAAAAACATGGATTAAAATTTTTTAACTTATCAAGAACACTAATAAGCAAACATTAGCAGACTACCTGAAGAAGATAATAGCAGATGGAAGATCTCCCATATACACAAAAGTTGGGGAAATAATGACTTCTGAGGTTAATTTCTGTGTTCCCTAAGCTAAAAACCAGATTTCAAACAACATTTTTCATTCATACATTTCTATTTTTCATGAACAGGACAAGCTAGTAAGCGTAACGTCCGACACGAACATCCTTAAAGCAATGCAGCTAATGACAGGTAAATACTAAATACAGAGTCGTTTATGTTCTGAAATTACCATGAAAATGGGAGTCGGCTCGTTCTCCAGCTGCATCAACGACCATCTAAGTTTTCGACATTTGCAGAGAATCGCATACGACACGTTCCTGTGATAGATGGCAAACTAGTTGGCATGATTTCTATAGTAGATGTTGTCAGAGCAGTGGTAGAGCAGCAAAATGGGGAACTCAAACGACTGAATGAGTATATAAAAGGAGAATACTACTGA

mRNA sequence

ATGCAGGTGATCGTAAGAGCAGTACGATCGTGGCAAGAGACGCTGAAGATCGCTATCTCGCAGCACTCGTGCAGGAGAGAAACGAATCAAGTGGAGAAGCTTTTCGAAGGATCCAACTTAGGAGCTTCATCTTCTATACTGAAAGGTTTGGAGAACATTTTGGTGGCGGAGATCGTTTCGAGTAAGGGAGATGGAAGTATTGGCTCCCCTTGGCTATCCTGTCGAGCCAATGACACCGCCATTGATGCCGTGCAAAACATGGCTAGAAACAATATTGGATCGTTGGTGGTGCTGAAGCCTGAAGGACAACACATTGCTGGAATTGTAACAGAACGAGACTACCTGAAGAAGATAATAGCAGATGGAAGATCTCCCATATACACAAAAGTTGGGGAAATAATGACTTCTGAGGACAAGCTAGTAAGCGTAACGTCCGACACGAACATCCTTAAAGCAATGCAGCTAATGACAGAGAATCGCATACGACACGTTCCTGTGATAGATGGCAAACTAGTTGGCATGATTTCTATAGTAGATGTTGTCAGAGCAGTGGTAGAGCAGCAAAATGGGGAACTCAAACGACTGAATGAGTATATAAAAGGAGAATACTACTGA

Coding sequence (CDS)

ATGCAGGTGATCGTAAGAGCAGTACGATCGTGGCAAGAGACGCTGAAGATCGCTATCTCGCAGCACTCGTGCAGGAGAGAAACGAATCAAGTGGAGAAGCTTTTCGAAGGATCCAACTTAGGAGCTTCATCTTCTATACTGAAAGGTTTGGAGAACATTTTGGTGGCGGAGATCGTTTCGAGTAAGGGAGATGGAAGTATTGGCTCCCCTTGGCTATCCTGTCGAGCCAATGACACCGCCATTGATGCCGTGCAAAACATGGCTAGAAACAATATTGGATCGTTGGTGGTGCTGAAGCCTGAAGGACAACACATTGCTGGAATTGTAACAGAACGAGACTACCTGAAGAAGATAATAGCAGATGGAAGATCTCCCATATACACAAAAGTTGGGGAAATAATGACTTCTGAGGACAAGCTAGTAAGCGTAACGTCCGACACGAACATCCTTAAAGCAATGCAGCTAATGACAGAGAATCGCATACGACACGTTCCTGTGATAGATGGCAAACTAGTTGGCATGATTTCTATAGTAGATGTTGTCAGAGCAGTGGTAGAGCAGCAAAATGGGGAACTCAAACGACTGAATGAGTATATAAAAGGAGAATACTACTGA

Protein sequence

MQVIVRAVRSWQETLKIAISQHSCRRETNQVEKLFEGSNLGASSSILKGLENILVAEIVSSKGDGSIGSPWLSCRANDTAIDAVQNMARNNIGSLVVLKPEGQHIAGIVTERDYLKKIIADGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMISIVDVVRAVVEQQNGELKRLNEYIKGEYY

Homology

[Close]

BLAST of Csor.00g052670 vs. ExPASy Swiss-Prot
Match: Q9LEV3 (CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CBSX3 PE=1 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 3.6e-42
Identity = 100/218 (45.87%), Postives = 142/218 (65.14%), Query Frame = 0


Query: 1   MQVIVRAVRSWQETLKIAISQH-------------SCRRETNQVEKLFEGSNLGASSSIL 60
           MQ ++R+  S    +K ++ QH               R E+ Q  ++ E           
Sbjct: 1   MQGVIRSFVSGGNVVKGSVLQHLRVINPAIQPSVFCSRSESTQPARMEE----------- 60

Query: 61  KGLENILVAEIVSSKGDGSIGSPWLSCRANDTAIDAVQNMARNNIGSLVVLKP-EGQHIA 120
            G E+  +++++ SKG  + GS WL C  +DT  DAV++M ++N+G+LVV+KP E Q +A
Sbjct: 61  SGFESTTISDVMKSKGKSADGS-WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQALA 120

Query: 121 GIVTERDYLKKIIADGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPV 180
           GI+TERDYL+KII  GRS   TKVG+IMT E+KL++VT +T +L+AMQLMT+NRIRH+PV
Sbjct: 121 GIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVTPETKVLRAMQLMTDNRIRHIPV 180

Query: 181 IDGK-LVGMISIVDVVRAVVEQQNGELKRLNEYIKGEY 204
           I  K ++GM+SI DVVRAVV +   EL+RLN YI+G Y
Sbjct: 181 IKDKGMIGMVSIGDVVRAVVHEHREELQRLNAYIQGGY 206

[Close]

BLAST of Csor.00g052670 vs. ExPASy Swiss-Prot
Match: P32987 (Uncharacterized 17.7 kDa protein in bps2 3'region OS=Acidianus ambivalens OX=2283 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.0e-12
Identity = 46/129 (35.66%), Postives = 75/129 (58.14%), Query Frame = 0


Query: 75  RANDTAIDAVQNMARNNIGSLVVLKPEGQHIAGIVTERDYLKKIIADGRSPIYTKVGEIM 134
           + N T  +A + M  +N+GSLVV+  + + + GI+TERD +K   A     I + V + M
Sbjct: 17  KPNVTIAEAAKEMKEHNLGSLVVIDSQNR-VVGIITERDIVK---AASNRDIDSPVEKYM 76

Query: 135 TSEDKLVSVTSDTNILKAMQLMTENRIRHVPVI--DGKLVGMISIVDVVRAVVEQQNGEL 194
           T + K   VT DT +  A+ +M  N  RH+P+I  +GKL G++SI D+ RA+++    + 
Sbjct: 77  TKDVK--GVTEDTEVTDALDIMLNNGFRHLPIIKSNGKLYGIVSIRDLARALLDVHTMQF 136

Query: 195 KRLNEYIKG 202
            +  E +KG
Sbjct: 137 GKPAEEVKG 139

[Close]

BLAST of Csor.00g052670 vs. ExPASy Swiss-Prot
Match: P50100 (Uncharacterized protein MK0525 OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) OX=190192 GN=MK0525 PE=4 SV=2)

HSP 1 Score: 70.5 bits (171), Expect = 2.5e-11
Identity = 43/156 (27.56%), Postives = 91/156 (58.33%), Query Frame = 0


Query: 50  LENILVAEIVSSKGDGSIGSPWLSCRANDTAIDAVQNMARNNIGSLVVLKPEGQHIAGIV 109
           + ++ V E+  ++ D   GSP       +TA++    M  + IGS+V++  + + I GI+
Sbjct: 1   MRSVSVGEV--ARRDVITGSP------TETAVEIAYKMREHGIGSVVIVNEKDEPI-GII 60

Query: 110 TERDYLKKIIADGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVID- 169
           TERD + K+++ G++P      +IM+    +++V  D  + +A++LM +  IR +P++D 
Sbjct: 61  TERDLVIKVVSQGKNPDEVIARDIMS--QPVITVEEDMEVNEAVKLMVDKGIRRLPIVDD 120

Query: 170 -GKLVGMISIVDVVRA---VVEQQNGELKRLNEYIK 201
            GKL+G++++ D+++    +V     E+K+  E ++
Sbjct: 121 NGKLIGIVTMQDILQVEPYLVATIEEEMKKFQEELE 145

[Close]

BLAST of Csor.00g052670 vs. ExPASy Swiss-Prot
Match: Q9SJQ5 (CBS domain-containing protein CBSCBSPB2 OS=Arabidopsis thaliana OX=3702 GN=CBSCBSPB2 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.1e-09
Identity = 34/107 (31.78%), Postives = 64/107 (59.81%), Query Frame = 0


Query: 72  LSCRANDTAIDAVQNMARNNIGSLVVLKPEGQHIAGIVTERDYLKKIIADGRSPIYTKVG 131
           L+     T  DA + MA   + + V+L      ++GIVT++D   ++IA+G  P +T V 
Sbjct: 71  LTINEGTTVFDACRRMAARRVDA-VLLTDSSALLSGIVTDKDIATRVIAEGLRPEHTLVS 130

Query: 132 EIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVID-GKLVGMISI 178
           ++MT     + VTSD+  ++A+Q M + + RH+PV++ G+++ ++ I
Sbjct: 131 KVMTRNP--IFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIALLDI 174

[Close]

BLAST of Csor.00g052670 vs. ExPASy Swiss-Prot
Match: Q9LF97 (CBS domain-containing protein CBSCBSPB3 OS=Arabidopsis thaliana OX=3702 GN=CBSCBSPB3 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.6e-08
Identity = 33/100 (33.00%), Postives = 60/100 (60.00%), Query Frame = 0


Query: 79  TAIDAVQNMARNNIGSLVVLKPEGQHIAGIVTERDYLKKIIADGRSPIYTKVGEIMTSED 138
           T  DA + MA   + +  +L      ++GIVT++D   ++IA+G  P  T V ++MT   
Sbjct: 80  TVFDACRRMAARRVDA-CLLTDSSALLSGIVTDKDVATRVIAEGLRPDQTLVSKVMTRNP 139

Query: 139 KLVSVTSDTNILKAMQLMTENRIRHVPVID-GKLVGMISI 178
             + VTSD+  L+A+Q M + + RH+PV++ G+++ ++ I
Sbjct: 140 --IFVTSDSLALEALQKMVQGKFRHLPVVENGEVIALLDI 176

[Close]

BLAST of Csor.00g052670 vs. NCBI nr
Match: KAG6585586.1 (CBS domain-containing protein CBSX3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020501.1 CBS domain-containing protein CBSX3, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 392 bits (1007), Expect = 2.80e-137
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MQVIVRAVRSWQETLKIAISQHSCRRETNQVEKLFEGSNLGASSSILKGLENILVAEIVS 60
           MQVIVRAVRSWQETLKIAISQHSCRRETNQVEKLFEGSNLGASSSILKGLENILVAEIVS
Sbjct: 1   MQVIVRAVRSWQETLKIAISQHSCRRETNQVEKLFEGSNLGASSSILKGLENILVAEIVS 60

Query: 61  SKGDGSIGSPWLSCRANDTAIDAVQNMARNNIGSLVVLKPEGQHIAGIVTERDYLKKIIA 120
           SKGDGSIGSPWLSCRANDTAIDAVQNMARNNIGSLVVLKPEGQHIAGIVTERDYLKKIIA
Sbjct: 61  SKGDGSIGSPWLSCRANDTAIDAVQNMARNNIGSLVVLKPEGQHIAGIVTERDYLKKIIA 120

Query: 121 DGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMISIVDV 180
           DGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMISIVDV
Sbjct: 121 DGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMISIVDV 180

Query: 181 VRAVVEQQNGELKRLNEYIKGEYY 204
           VRAVVEQQNGELKRLNEYIKGEYY
Sbjct: 181 VRAVVEQQNGELKRLNEYIKGEYY 204

[Close]

BLAST of Csor.00g052670 vs. NCBI nr
Match: XP_023538057.1 (CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 384 bits (986), Expect = 4.45e-134
Identity = 200/204 (98.04%), Postives = 202/204 (99.02%), Query Frame = 0


Query: 1   MQVIVRAVRSWQETLKIAISQHSCRRETNQVEKLFEGSNLGASSSILKGLENILVAEIVS 60
           MQ IVRAVRSWQETLKIAISQHSCRRETNQVEKLFEGS+LGASSS+LKGLENI VAEIVS
Sbjct: 1   MQGIVRAVRSWQETLKIAISQHSCRRETNQVEKLFEGSDLGASSSMLKGLENISVAEIVS 60

Query: 61  SKGDGSIGSPWLSCRANDTAIDAVQNMARNNIGSLVVLKPEGQHIAGIVTERDYLKKIIA 120
           SKGDGSIGSPWLSCRANDTAIDAVQNMARNNIGSLVVLKPEGQHIAGIVTERDYLKKIIA
Sbjct: 61  SKGDGSIGSPWLSCRANDTAIDAVQNMARNNIGSLVVLKPEGQHIAGIVTERDYLKKIIA 120

Query: 121 DGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMISIVDV 180
           DGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMISIVDV
Sbjct: 121 DGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMISIVDV 180

Query: 181 VRAVVEQQNGELKRLNEYIKGEYY 204
           VRAVVEQQNGELKRLNEYIKGEYY
Sbjct: 181 VRAVVEQQNGELKRLNEYIKGEYY 204

[Close]

BLAST of Csor.00g052670 vs. NCBI nr
Match: XP_022951679.1 (CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 379 bits (973), Expect = 4.27e-132
Identity = 198/204 (97.06%), Postives = 201/204 (98.53%), Query Frame = 0


Query: 1   MQVIVRAVRSWQETLKIAISQHSCRRETNQVEKLFEGSNLGASSSILKGLENILVAEIVS 60
           MQ IVRAVRSWQETLKIAISQHSCRRETNQVEKLF+GSNLGASSS+LKGLENI VAEIVS
Sbjct: 1   MQGIVRAVRSWQETLKIAISQHSCRRETNQVEKLFKGSNLGASSSMLKGLENISVAEIVS 60

Query: 61  SKGDGSIGSPWLSCRANDTAIDAVQNMARNNIGSLVVLKPEGQHIAGIVTERDYLKKIIA 120
           SKGDGSIGSPWLSCRA+DTAI AVQNMARNNIGSLVVLKPEGQHIAGIVTERDYLKKIIA
Sbjct: 61  SKGDGSIGSPWLSCRADDTAIVAVQNMARNNIGSLVVLKPEGQHIAGIVTERDYLKKIIA 120

Query: 121 DGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMISIVDV 180
           DGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMISIVDV
Sbjct: 121 DGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMISIVDV 180

Query: 181 VRAVVEQQNGELKRLNEYIKGEYY 204
           VRAVVEQQNGELKRLNEYIKGEYY
Sbjct: 181 VRAVVEQQNGELKRLNEYIKGEYY 204

[Close]

BLAST of Csor.00g052670 vs. NCBI nr
Match: XP_023002498.1 (CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 378 bits (971), Expect = 8.61e-132
Identity = 195/204 (95.59%), Postives = 202/204 (99.02%), Query Frame = 0


Query: 1   MQVIVRAVRSWQETLKIAISQHSCRRETNQVEKLFEGSNLGASSSILKGLENILVAEIVS 60
           MQ +VRAVRSWQETLKIAISQHSCRRETNQVEKLF+GS++GASSS+LKGLENI VAEI+S
Sbjct: 1   MQGMVRAVRSWQETLKIAISQHSCRRETNQVEKLFKGSDIGASSSMLKGLENISVAEIIS 60

Query: 61  SKGDGSIGSPWLSCRANDTAIDAVQNMARNNIGSLVVLKPEGQHIAGIVTERDYLKKIIA 120
           SKGDGSIGSPWLSCRA+DTAIDAVQNMARNNIGSLVVLKPEGQHIAGIVTERDYLKKIIA
Sbjct: 61  SKGDGSIGSPWLSCRADDTAIDAVQNMARNNIGSLVVLKPEGQHIAGIVTERDYLKKIIA 120

Query: 121 DGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMISIVDV 180
           DGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMISIVDV
Sbjct: 121 DGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMISIVDV 180

Query: 181 VRAVVEQQNGELKRLNEYIKGEYY 204
           VRAVVEQQNGELKRLNEYIKGEYY
Sbjct: 181 VRAVVEQQNGELKRLNEYIKGEYY 204

[Close]

BLAST of Csor.00g052670 vs. NCBI nr
Match: XP_023546015.1 (CBS domain-containing protein CBSX3, mitochondrial-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 336 bits (861), Expect = 5.01e-115
Identity = 175/204 (85.78%), Postives = 184/204 (90.20%), Query Frame = 0


Query: 1   MQVIVRAVRSWQETLKIAISQHSCRRETNQVEKLFEGSNLGASSSILKGLENILVAEIVS 60
           MQ IVRA+RSWQETLKIA SQHSCRRETNQVEK+ EGS    SSS LKGLENI VAEIVS
Sbjct: 1   MQAIVRALRSWQETLKIANSQHSCRRETNQVEKILEGSESRGSSSPLKGLENITVAEIVS 60

Query: 61  SKGDGSIGSPWLSCRANDTAIDAVQNMARNNIGSLVVLKPEGQHIAGIVTERDYLKKIIA 120
             GDGSIGS WLSC A+D AID VQNMARNN+GSLVVLKPEGQ IAGIVTE DYLKKIIA
Sbjct: 61  RNGDGSIGSSWLSCSADDAAIDTVQNMARNNVGSLVVLKPEGQQIAGIVTEGDYLKKIIA 120

Query: 121 DGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMISIVDV 180
           DGR PIYTKVGEIMT EDKLV+VTSDTNILKAMQLMTENRIRHVPVIDGKLVGMIS+VDV
Sbjct: 121 DGRCPIYTKVGEIMTCEDKLVTVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMISVVDV 180

Query: 181 VRAVVEQQNGELKRLNEYIKGEYY 204
           V+AVV+QQNGEL+RLNEYIKGE Y
Sbjct: 181 VKAVVKQQNGELERLNEYIKGESY 204

[Close]

BLAST of Csor.00g052670 vs. ExPASy TrEMBL
Match: A0A6J1GJI0 (CBS domain-containing protein CBSX3, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111454421 PE=4 SV=1)

HSP 1 Score: 379 bits (973), Expect = 2.07e-132
Identity = 198/204 (97.06%), Postives = 201/204 (98.53%), Query Frame = 0


Query: 1   MQVIVRAVRSWQETLKIAISQHSCRRETNQVEKLFEGSNLGASSSILKGLENILVAEIVS 60
           MQ IVRAVRSWQETLKIAISQHSCRRETNQVEKLF+GSNLGASSS+LKGLENI VAEIVS
Sbjct: 1   MQGIVRAVRSWQETLKIAISQHSCRRETNQVEKLFKGSNLGASSSMLKGLENISVAEIVS 60

Query: 61  SKGDGSIGSPWLSCRANDTAIDAVQNMARNNIGSLVVLKPEGQHIAGIVTERDYLKKIIA 120
           SKGDGSIGSPWLSCRA+DTAI AVQNMARNNIGSLVVLKPEGQHIAGIVTERDYLKKIIA
Sbjct: 61  SKGDGSIGSPWLSCRADDTAIVAVQNMARNNIGSLVVLKPEGQHIAGIVTERDYLKKIIA 120

Query: 121 DGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMISIVDV 180
           DGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMISIVDV
Sbjct: 121 DGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMISIVDV 180

Query: 181 VRAVVEQQNGELKRLNEYIKGEYY 204
           VRAVVEQQNGELKRLNEYIKGEYY
Sbjct: 181 VRAVVEQQNGELKRLNEYIKGEYY 204

[Close]

BLAST of Csor.00g052670 vs. ExPASy TrEMBL
Match: A0A6J1KTQ7 (CBS domain-containing protein CBSX3, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111496322 PE=4 SV=1)

HSP 1 Score: 378 bits (971), Expect = 4.17e-132
Identity = 195/204 (95.59%), Postives = 202/204 (99.02%), Query Frame = 0


Query: 1   MQVIVRAVRSWQETLKIAISQHSCRRETNQVEKLFEGSNLGASSSILKGLENILVAEIVS 60
           MQ +VRAVRSWQETLKIAISQHSCRRETNQVEKLF+GS++GASSS+LKGLENI VAEI+S
Sbjct: 1   MQGMVRAVRSWQETLKIAISQHSCRRETNQVEKLFKGSDIGASSSMLKGLENISVAEIIS 60

Query: 61  SKGDGSIGSPWLSCRANDTAIDAVQNMARNNIGSLVVLKPEGQHIAGIVTERDYLKKIIA 120
           SKGDGSIGSPWLSCRA+DTAIDAVQNMARNNIGSLVVLKPEGQHIAGIVTERDYLKKIIA
Sbjct: 61  SKGDGSIGSPWLSCRADDTAIDAVQNMARNNIGSLVVLKPEGQHIAGIVTERDYLKKIIA 120

Query: 121 DGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMISIVDV 180
           DGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMISIVDV
Sbjct: 121 DGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMISIVDV 180

Query: 181 VRAVVEQQNGELKRLNEYIKGEYY 204
           VRAVVEQQNGELKRLNEYIKGEYY
Sbjct: 181 VRAVVEQQNGELKRLNEYIKGEYY 204

[Close]

BLAST of Csor.00g052670 vs. ExPASy TrEMBL
Match: A0A6J1HF98 (CBS domain-containing protein CBSX3, mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462506 PE=4 SV=1)

HSP 1 Score: 333 bits (855), Expect = 1.99e-114
Identity = 173/204 (84.80%), Postives = 183/204 (89.71%), Query Frame = 0


Query: 1   MQVIVRAVRSWQETLKIAISQHSCRRETNQVEKLFEGSNLGASSSILKGLENILVAEIVS 60
           MQ IVRA+RSWQETLKIA S HSCRRETNQVEK+ EGS    SSS LKGLENI VAEIVS
Sbjct: 1   MQGIVRAIRSWQETLKIANSHHSCRRETNQVEKILEGSESRGSSSPLKGLENITVAEIVS 60

Query: 61  SKGDGSIGSPWLSCRANDTAIDAVQNMARNNIGSLVVLKPEGQHIAGIVTERDYLKKIIA 120
             GDGSIGS W SC A+D AID VQNMARNN+GSLVVLKPEGQHIAGIVTE DYLKKIIA
Sbjct: 61  RNGDGSIGSSWFSCSADDAAIDTVQNMARNNVGSLVVLKPEGQHIAGIVTEGDYLKKIIA 120

Query: 121 DGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMISIVDV 180
           DGR PIYTKVGEIMT EDKLV+VTSDTNILKAMQLMTENRIRHVPVIDGKLVG+IS+VDV
Sbjct: 121 DGRCPIYTKVGEIMTCEDKLVTVTSDTNILKAMQLMTENRIRHVPVIDGKLVGIISVVDV 180

Query: 181 VRAVVEQQNGELKRLNEYIKGEYY 204
           V+AVV+QQNGEL+RLNEYIKGE Y
Sbjct: 181 VKAVVKQQNGELERLNEYIKGESY 204

[Close]

BLAST of Csor.00g052670 vs. ExPASy TrEMBL
Match: A0A6J1K5H5 (CBS domain-containing protein CBSX3, mitochondrial-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491856 PE=4 SV=1)

HSP 1 Score: 331 bits (849), Expect = 7.06e-113
Identity = 171/204 (83.82%), Postives = 183/204 (89.71%), Query Frame = 0


Query: 1   MQVIVRAVRSWQETLKIAISQHSCRRETNQVEKLFEGSNLGASSSILKGLENILVAEIVS 60
           MQ IV+A+RSWQETLKIA SQHSCRRETNQVEK  EGS    SSS LKG+ENI VAEIVS
Sbjct: 43  MQAIVKALRSWQETLKIANSQHSCRRETNQVEKFLEGSESRGSSSPLKGMENITVAEIVS 102

Query: 61  SKGDGSIGSPWLSCRANDTAIDAVQNMARNNIGSLVVLKPEGQHIAGIVTERDYLKKIIA 120
            KGDGSIGS W SC A+D AID VQNMARNN+GSLVVLKPEGQHIAGIVTE DYLKKIIA
Sbjct: 103 RKGDGSIGSSWFSCSADDAAIDTVQNMARNNVGSLVVLKPEGQHIAGIVTEGDYLKKIIA 162

Query: 121 DGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMISIVDV 180
           DGR PI+TKVGEIMT EDKLV+VTSDTNILKAMQLMTENR RHVPVIDGKLVGMISIVDV
Sbjct: 163 DGRCPIFTKVGEIMTCEDKLVTVTSDTNILKAMQLMTENRTRHVPVIDGKLVGMISIVDV 222

Query: 181 VRAVVEQQNGELKRLNEYIKGEYY 204
           V+AVV+QQNGEL+++NEYIKGE Y
Sbjct: 223 VKAVVKQQNGELEQINEYIKGESY 246

[Close]

BLAST of Csor.00g052670 vs. ExPASy TrEMBL
Match: A0A6J1HD27 (CBS domain-containing protein CBSX3, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462506 PE=4 SV=1)

HSP 1 Score: 329 bits (843), Expect = 1.39e-112
Identity = 173/205 (84.39%), Postives = 183/205 (89.27%), Query Frame = 0


Query: 1   MQVIVRAVRSWQETLKIAISQHSCRRETNQVEKLFEGSNLGASSSILKGLENILVAEIVS 60
           MQ IVRA+RSWQETLKIA S HSCRRETNQVEK+ EGS    SSS LKGLENI VAEIVS
Sbjct: 1   MQGIVRAIRSWQETLKIANSHHSCRRETNQVEKILEGSESRGSSSPLKGLENITVAEIVS 60

Query: 61  SKGDGSIGSPWLSCRANDTAIDAVQN-MARNNIGSLVVLKPEGQHIAGIVTERDYLKKII 120
             GDGSIGS W SC A+D AID VQN MARNN+GSLVVLKPEGQHIAGIVTE DYLKKII
Sbjct: 61  RNGDGSIGSSWFSCSADDAAIDTVQNVMARNNVGSLVVLKPEGQHIAGIVTEGDYLKKII 120

Query: 121 ADGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMISIVD 180
           ADGR PIYTKVGEIMT EDKLV+VTSDTNILKAMQLMTENRIRHVPVIDGKLVG+IS+VD
Sbjct: 121 ADGRCPIYTKVGEIMTCEDKLVTVTSDTNILKAMQLMTENRIRHVPVIDGKLVGIISVVD 180

Query: 181 VVRAVVEQQNGELKRLNEYIKGEYY 204
           VV+AVV+QQNGEL+RLNEYIKGE Y
Sbjct: 181 VVKAVVKQQNGELERLNEYIKGESY 205

[Close]

BLAST of Csor.00g052670 vs. TAIR 10
Match: AT1G47271.1 (Cystathionine beta-synthase (CBS) family protein )

HSP 1 Score: 214.5 bits (545), Expect = 7.7e-56
Identity = 110/158 (69.62%), Postives = 137/158 (86.71%), Query Frame = 0


Query: 48  KGLENILVAEIVSSKGDGSIGSPWLSCRANDTAIDAVQNMARNNIGSLVVLKP-EGQHIA 107
           KGLEN+ VA+++S+K D  I + W+SCR NDT  DAV+NMA++NIGSLVVL+P + Q+IA
Sbjct: 38  KGLENLTVADVLSTK-DTDIDT-WISCRTNDTVSDAVKNMAKHNIGSLVVLEPGDQQYIA 97

Query: 108 GIVTERDYLKKIIADGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPV 167
           GIVTERDY+KKII  GRS   TKVGE+MT E KLV+V+S TNI+KAMQLM+EN IRHVPV
Sbjct: 98  GIVTERDYMKKIIGAGRSSKLTKVGEVMTDESKLVTVSSGTNIIKAMQLMSENHIRHVPV 157

Query: 168 IDGKLVGMISIVDVVRAVVEQQNGELKRLNEYIKGEYY 205
           IDGK+VG+IS+VDVV+A+V+ QNGELKRLNE+IKG+YY
Sbjct: 158 IDGKIVGLISMVDVVKAIVDHQNGELKRLNEFIKGDYY 193

[Close]

BLAST of Csor.00g052670 vs. TAIR 10
Match: AT5G10860.1 (Cystathionine beta-synthase (CBS) family protein )

HSP 1 Score: 172.9 bits (437), Expect = 2.6e-43
Identity = 100/218 (45.87%), Postives = 142/218 (65.14%), Query Frame = 0


Query: 1   MQVIVRAVRSWQETLKIAISQH-------------SCRRETNQVEKLFEGSNLGASSSIL 60
           MQ ++R+  S    +K ++ QH               R E+ Q  ++ E           
Sbjct: 1   MQGVIRSFVSGGNVVKGSVLQHLRVINPAIQPSVFCSRSESTQPARMEE----------- 60

Query: 61  KGLENILVAEIVSSKGDGSIGSPWLSCRANDTAIDAVQNMARNNIGSLVVLKP-EGQHIA 120
            G E+  +++++ SKG  + GS WL C  +DT  DAV++M ++N+G+LVV+KP E Q +A
Sbjct: 61  SGFESTTISDVMKSKGKSADGS-WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQALA 120

Query: 121 GIVTERDYLKKIIADGRSPIYTKVGEIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPV 180
           GI+TERDYL+KII  GRS   TKVG+IMT E+KL++VT +T +L+AMQLMT+NRIRH+PV
Sbjct: 121 GIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVTPETKVLRAMQLMTDNRIRHIPV 180

Query: 181 IDGK-LVGMISIVDVVRAVVEQQNGELKRLNEYIKGEY 204
           I  K ++GM+SI DVVRAVV +   EL+RLN YI+G Y
Sbjct: 181 IKDKGMIGMVSIGDVVRAVVHEHREELQRLNAYIQGGY 206

[Close]

BLAST of Csor.00g052670 vs. TAIR 10
Match: AT2G36500.1 (CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein )

HSP 1 Score: 63.5 bits (153), Expect = 2.2e-10
Identity = 34/107 (31.78%), Postives = 64/107 (59.81%), Query Frame = 0


Query: 72  LSCRANDTAIDAVQNMARNNIGSLVVLKPEGQHIAGIVTERDYLKKIIADGRSPIYTKVG 131
           L+     T  DA + MA   + + V+L      ++GIVT++D   ++IA+G  P +T V 
Sbjct: 71  LTINEGTTVFDACRRMAARRVDA-VLLTDSSALLSGIVTDKDIATRVIAEGLRPEHTLVS 130

Query: 132 EIMTSEDKLVSVTSDTNILKAMQLMTENRIRHVPVID-GKLVGMISI 178
           ++MT     + VTSD+  ++A+Q M + + RH+PV++ G+++ ++ I
Sbjct: 131 KVMTRNP--IFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIALLDI 174

[Close]

BLAST of Csor.00g052670 vs. TAIR 10
Match: AT3G52950.1 (CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.9e-09
Identity = 33/100 (33.00%), Postives = 60/100 (60.00%), Query Frame = 0


Query: 79  TAIDAVQNMARNNIGSLVVLKPEGQHIAGIVTERDYLKKIIADGRSPIYTKVGEIMTSED 138
           T  DA + MA   + +  +L      ++GIVT++D   ++IA+G  P  T V ++MT   
Sbjct: 80  TVFDACRRMAARRVDA-CLLTDSSALLSGIVTDKDVATRVIAEGLRPDQTLVSKVMTRNP 139

Query: 139 KLVSVTSDTNILKAMQLMTENRIRHVPVID-GKLVGMISI 178
             + VTSD+  L+A+Q M + + RH+PV++ G+++ ++ I
Sbjct: 140 --IFVTSDSLALEALQKMVQGKFRHLPVVENGEVIALLDI 176

[Close]

BLAST of Csor.00g052670 vs. TAIR 10
Match: AT3G52950.2 (CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.9e-09
Identity = 33/100 (33.00%), Postives = 60/100 (60.00%), Query Frame = 0


Query: 79  TAIDAVQNMARNNIGSLVVLKPEGQHIAGIVTERDYLKKIIADGRSPIYTKVGEIMTSED 138
           T  DA + MA   + +  +L      ++GIVT++D   ++IA+G  P  T V ++MT   
Sbjct: 80  TVFDACRRMAARRVDA-CLLTDSSALLSGIVTDKDVATRVIAEGLRPDQTLVSKVMTRNP 139

Query: 139 KLVSVTSDTNILKAMQLMTENRIRHVPVID-GKLVGMISI 178
             + VTSD+  L+A+Q M + + RH+PV++ G+++ ++ I
Sbjct: 140 --IFVTSDSLALEALQKMVQGKFRHLPVVENGEVIALLDI 176

The following BLAST results are available for this feature:

BLAST of Csor.00g052670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LEV3	3.6e-42	45.87	CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis thaliana OX=37...	[more]
P32987	1.0e-12	35.66	Uncharacterized 17.7 kDa protein in bps2 3'region OS=Acidianus ambivalens OX=228...	[more]
P50100	2.5e-11	27.56	Uncharacterized protein MK0525 OS=Methanopyrus kandleri (strain AV19 / DSM 6324 ...	[more]
Q9SJQ5	3.1e-09	31.78	CBS domain-containing protein CBSCBSPB2 OS=Arabidopsis thaliana OX=3702 GN=CBSCB...	[more]
Q9LF97	2.6e-08	33.00	CBS domain-containing protein CBSCBSPB3 OS=Arabidopsis thaliana OX=3702 GN=CBSCB...	[more]

BLAST of Csor.00g052670 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6585586.1	2.80e-137	100.00	CBS domain-containing protein CBSX3, mitochondrial, partial [Cucurbita argyrospe...	[more]
XP_023538057.1	4.45e-134	98.04	CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita pepo subsp. p...	[more]
XP_022951679.1	4.27e-132	97.06	CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita moschata]	[more]
XP_023002498.1	8.61e-132	95.59	CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita maxima]	[more]
XP_023546015.1	5.01e-115	85.78	CBS domain-containing protein CBSX3, mitochondrial-like isoform X2 [Cucurbita pe...	[more]

BLAST of Csor.00g052670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GJI0	2.07e-132	97.06	CBS domain-containing protein CBSX3, mitochondrial-like OS=Cucurbita moschata OX...	[more]
A0A6J1KTQ7	4.17e-132	95.59	CBS domain-containing protein CBSX3, mitochondrial-like OS=Cucurbita maxima OX=3...	[more]
A0A6J1HF98	1.99e-114	84.80	CBS domain-containing protein CBSX3, mitochondrial-like isoform X2 OS=Cucurbita ...	[more]
A0A6J1K5H5	7.06e-113	83.82	CBS domain-containing protein CBSX3, mitochondrial-like isoform X2 OS=Cucurbita ...	[more]
A0A6J1HD27	1.39e-112	84.39	CBS domain-containing protein CBSX3, mitochondrial-like isoform X1 OS=Cucurbita ...	[more]

BLAST of Csor.00g052670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47271.1	7.7e-56	69.62	Cystathionine beta-synthase (CBS) family protein	[more]
AT5G10860.1	2.6e-43	45.87	Cystathionine beta-synthase (CBS) family protein	[more]
AT2G36500.1	2.2e-10	31.78	CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein	[more]
AT3G52950.1	1.9e-09	33.00	CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein	[more]
AT3G52950.2	1.9e-09	33.00	CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000644	CBS domain	SMART	SM00116	cbs_1	coord: 70..119 e-value: 2.1E-4 score: 30.6 coord: 139..185 e-value: 4.7E-10 score: 49.4
IPR000644	CBS domain	PFAM	PF00571	CBS	coord: 72..118 e-value: 3.4E-6 score: 27.4 coord: 130..185 e-value: 6.9E-12 score: 45.6
IPR000644	CBS domain	PROSITE	PS51371	CBS	coord: 67..126 score: 10.630857
IPR000644	CBS domain	PROSITE	PS51371	CBS	coord: 134..192 score: 13.98159
None	No IPR available	GENE3D	3.10.580.10		coord: 49..203 e-value: 3.7E-44 score: 152.0
None	No IPR available	PANTHER	PTHR43080:SF12	CYSTATHIONINE BETA-SYNTHASE (CBS) FAMILY PROTEIN	coord: 1..203
None	No IPR available	PANTHER	PTHR43080	CBS DOMAIN-CONTAINING PROTEIN CBSX3, MITOCHONDRIAL	coord: 1..203
None	No IPR available	SUPERFAMILY	54631	CBS-domain pair	coord: 69..192
IPR044725	CBS domain-containing protein CBSX3, CBS domain	CDD	cd04623	CBS_pair_bac_euk	coord: 68..182 e-value: 4.11566E-45 score: 143.711

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g052670.m01	Csor.00g052670.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane