Csor.00g052380 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g052380
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr12: 2671729 .. 2672307 (-)
RNA-Seq ExpressionCsor.00g052380
SyntenyCsor.00g052380
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTTGTTTTCTTGGGATTGTCAATTTTTCCCGGAGTAGCTTGTGTGCGTCCACGTGAGTCTCGACACGTTTAGGACTTACAATTTTGCTGAGGATTCCTATTCATATGTGAATCTCATCATAATTTTCTTTTAGAGTCATGACATCCTGCAGGCTGAGCTTCTGTTACAAGTGGTTTATGTTCATGGAATGCTGCTGCCTGCAAATATCATCGTCGGGTTTCGACCCTTTTCTTCGGTAGAGATATCGTATTTCTTATTCTTTCCTCTACACATTATAATGAATACTATTGTTATTTATTTACCAATAGGTAATGATAGTAGCAAAGGAAATCATACCTTATCAAGATCTGATGCCCACTTCCTCTTATCATACTCATTTTTTTTGTTCTTTTTGAATTCTATATATGACAGATACTATTGGTGGATGGAAATTCAAACTAAAAGAATCTGTAAGATGAGGGGAGATTTGTTGAAGTCATTTAGGTATTGGTTATACATTGGCTTCGAGTTTTTCCATGATCGCCATAGCTCCCCCATGTTATCAAATTTGTCTGTATAAATTGGCTTGCAGTTGA

mRNA sequence

ATGATTTGTTTTCTTGGGATTGTCAATTTTTCCCGGAGTAGCTTGTGTGCGTCCACAGTCATGACATCCTGCAGGCTGAGCTTCTGTTACAAGTGGTTTATGTTCATGGAATGCTGCTGCCTGCAAATATCATCGTCGGGTTTCGACCCTTTTCTTCGATACTATTGGTGGATGGAAATTCAAACTAAAAGAATCTGTAAGATGAGGGGAGATTTGTTGAAGTCATTTAGTTGA

Coding sequence (CDS)

ATGATTTGTTTTCTTGGGATTGTCAATTTTTCCCGGAGTAGCTTGTGTGCGTCCACAGTCATGACATCCTGCAGGCTGAGCTTCTGTTACAAGTGGTTTATGTTCATGGAATGCTGCTGCCTGCAAATATCATCGTCGGGTTTCGACCCTTTTCTTCGATACTATTGGTGGATGGAAATTCAAACTAAAAGAATCTGTAAGATGAGGGGAGATTTGTTGAAGTCATTTAGTTGA

Protein sequence

MICFLGIVNFSRSSLCASTVMTSCRLSFCYKWFMFMECCCLQISSSGFDPFLRYYWWMEIQTKRICKMRGDLLKSFS
Homology
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BLAST of Csor.00g052380 vs. NCBI nr
Match: KAG6585615.1 (hypothetical protein SDJN03_18348, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 168 bits (426), Expect = 8.88e-53
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MICFLGIVNFSRSSLCASTVMTSCRLSFCYKWFMFMECCCLQISSSGFDPFLRYYWWMEI 60
          MICFLGIVNFSRSSLCASTVMTSCRLSFCYKWFMFMECCCLQISSSGFDPFLRYYWWMEI
Sbjct: 1  MICFLGIVNFSRSSLCASTVMTSCRLSFCYKWFMFMECCCLQISSSGFDPFLRYYWWMEI 60

Query: 61 QTKRICKMRGDLLKSFS 77
          QTKRICKMRGDLLKSFS
Sbjct: 61 QTKRICKMRGDLLKSFS 77

The following BLAST results are available for this feature:
BLAST of Csor.00g052380 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g052380 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6585615.18.88e-53100.00hypothetical protein SDJN03_18348, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g052380 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g052380 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g052380.m01Csor.00g052380.m01mRNA