Csor.00g042850 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCACCTGGAACGTGTACATGTTCCTCCATCTGAGCGAAATCTCAGGTCATCGTACTTACCTTCGTTGCCACCACCCTCGTCCACCATTTTAAAAAATGAAACAAAACTCAACTTTAGGATTTACCTGAAAGAGTACCTATTCCTCCATCTTGGTCGAATCCCTCCGAGAAAGGATCGTAGCTCAACATCGAGATGCATCTAGAACAAGTACTTGTTCCTCCGTCTGAGTAGAATCCCAGGTCATCGTACTCACCTCCACCCCACCCTCGTCCACCATTTTAGAAAACTAATCGAAACTCAACTTTGGGATGTATCCGAAAGGTGTACCTATTCCTCCATCTAGGCCGATTCCCTTCGAGAAGGGATCGCAACTCAACTTCGGGATGCACCTAGATTGAGTATCTGTTCCTCTATCTAAGCGGAATACCGGCTCATTGTACTTGTTTCTCGAGAAGGAATTGCAGCTCAACTCCGGGATATACCTGGAACGAGTACTTGTTCCTCCGTCTGAGCGGAATCCTAGATCATTGTACTCACCCTCCACCGCTGTAACAAACCTAAATTTCTACTTACCTAGAGTTGCTACCCTTATCATCATCATCTATACAAATTAAACATTTAAAACTTCATCTTAAAACACCGTCGTCATCATCATACTCACCTCTTGGAAAGAATAATTAATTTATTGATCTACTTATGTTATTCTCATTAACGACTTACTTGGAATTATTTTACAACCTTTTTTGCACTTAAAATATTTTTTAAGACCAAAAAATTATACAAAATATAAAGTAAGTTAAAAAAAAAGGCTAAAAAATATTTTTTATACTTTAAAAAAAATTAAAAATACTCCAACCATAGTTTTGGATGTAAACTTTTAATACATTTTTTTTAAAATACACTCCATTTTTTTAAAAAAAATGTTTAAAAAATTCTTCAAAACGTCAAAAAACACTTTTGAGCCTTTTAAAAAAACTTTAAAAAATGCTTTTATCATTAATACTGCCTTTACAAAATATTCATAAATTTTTAAAAGTAATATTAAAAATTTTGGAGATTATATTATTATCTACTTTTAAAATTTCATACTTATTTTAAGAATATTATCGTAATTTTTTAAATATTATTAAAATTTTAAAGAATTTTTTTAAAGGAAAGTGCGGACCGTTTTTATCCAATAAAGTATTGAATTGAATAAAAAAAAAAATAAAAAACAGCTTTTTTTTTTTTTTCTAATAAATTCAAAAACCGTAAATTGAATTAATAGAAAATGTTATATAAAGGAAGCCAGTAAAGAATCCAGAGTGTTTTTAGGATATATATATATTTTTTTTTAAAGAAAGTAATAATAGTTTTCACCTAAATAAGGTATTCAATTAAATGAGAAAAATAAACCATTGAATTCTAGAAAAAAAACCCCACAATTTAATGGCTAATAATTTAAAAAATTGTAAATTGAATTAACAAGTAAATGCTTTATAAAGGAAGCTAGAGAAGAATGAAAAAACACACAAAAAATGATCTCAGTCAATTTTAAAACGCTTTCAGGAGCTTGTGTTTTTATCCTCTTAGCGTTCCATTTTTCTACCCTAGGGCACAGGCTACAAGGACTAATGTGTTGAATGGGGATCTGAAACTCACTGGCTTAGAGAAGGGAACACAACTCAACTTTGGAATGCATTTAGACCGAGTACCTGTTCCTCCGTCTGGGTTGAATCCTGGGTCATCGTTCTCACCTCCGCTACCACCACTCGAGAAAGAATCGCAGCTCAACTTTGGAATGCACTTAGAACGAGTACCTGTTCCTCCGTCTGGGTTGAATCCTGGGTCATCCTTCTCACCTCCGCCACCACCACCCCAGAAGGGATCGTAG ATGCACCTGGAACGTGTACATGTTCCTCCATCTGAGCGAAATCTCAGGGCACAGGCTACAAGGACTAATGTGTTGAATGGGGATCTGAAACTCACTGGCTTAGAGAAGGGAACACAACTCAACTTTGGAATGCATTTAGACCGAGTACCTGTTCCTCCGTCTGGGTTGAATCCTGGGTCATCGTTCTCACCTCCGCTACCACCACTCGAGAAAGAATCGCAGCTCAACTTTGGAATGCACTTAGAACGAGTACCTGTTCCTCCGTCTGGGTTGAATCCTGGGTCATCCTTCTCACCTCCGCCACCACCACCCCAGAAGGGATCGTAG ATGCACCTGGAACGTGTACATGTTCCTCCATCTGAGCGAAATCTCAGGGCACAGGCTACAAGGACTAATGTGTTGAATGGGGATCTGAAACTCACTGGCTTAGAGAAGGGAACACAACTCAACTTTGGAATGCATTTAGACCGAGTACCTGTTCCTCCGTCTGGGTTGAATCCTGGGTCATCGTTCTCACCTCCGCTACCACCACTCGAGAAAGAATCGCAGCTCAACTTTGGAATGCACTTAGAACGAGTACCTGTTCCTCCGTCTGGGTTGAATCCTGGGTCATCCTTCTCACCTCCGCCACCACCACCCCAGAAGGGATCGTAG MHLERVHVPPSERNLRAQATRTNVLNGDLKLTGLEKGTQLNFGMHLDRVPVPPSGLNPGSSFSPPLPPLEKESQLNFGMHLERVPVPPSGLNPGSSFSPPPPPPQKGS Homology
BLAST of Csor.00g042850 vs. NCBI nr
Match: KAG6595470.1 (hypothetical protein SDJN03_12023, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 216 bits (549), Expect = 1.43e-70 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of Csor.00g042850 vs. NCBI nr
Match: KAG6595469.1 (hypothetical protein SDJN03_12022, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 110 bits (274), Expect = 7.64e-26 Identity = 65/107 (60.75%), Postives = 74/107 (69.16%), Query Frame = 0
BLAST of Csor.00g042850 vs. NCBI nr
Match: XP_011654399.2 (proline-rich protein HaeIII subfamily 1-like [Cucumis sativus]) HSP 1 Score: 62.8 bits (151), Expect = 1.14e-09 Identity = 34/69 (49.28%), Postives = 46/69 (66.67%), Query Frame = 0
BLAST of Csor.00g042850 vs. NCBI nr
Match: EOY16631.1 (Uncharacterized protein TCM_035454 [Theobroma cacao]) HSP 1 Score: 59.3 bits (142), Expect = 1.75e-08 Identity = 36/69 (52.17%), Postives = 47/69 (68.12%), Query Frame = 0
BLAST of Csor.00g042850 vs. NCBI nr
Match: XP_007019406.2 (PREDICTED: formin-like protein 20 [Theobroma cacao]) HSP 1 Score: 59.3 bits (142), Expect = 2.19e-08 Identity = 36/69 (52.17%), Postives = 47/69 (68.12%), Query Frame = 0
BLAST of Csor.00g042850 vs. ExPASy TrEMBL
Match: A0A061FHV4 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_035454 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 8.47e-09 Identity = 36/69 (52.17%), Postives = 47/69 (68.12%), Query Frame = 0
BLAST of Csor.00g042850 vs. ExPASy TrEMBL
Match: A0A6J1HRH7 (actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3661 GN=LOC111467141 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.75e-06 Identity = 33/70 (47.14%), Postives = 45/70 (64.29%), Query Frame = 0
BLAST of Csor.00g042850 vs. ExPASy TrEMBL
Match: A0A1S2Y3N8 (proline-rich protein 2-like OS=Cicer arietinum OX=3827 GN=LOC101510047 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 9.62e-06 Identity = 36/63 (57.14%), Postives = 43/63 (68.25%), Query Frame = 0
BLAST of Csor.00g042850 vs. ExPASy TrEMBL
Match: A0A2Z6N3Z2 (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_15960 PE=4 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.25e-05 Identity = 35/65 (53.85%), Postives = 44/65 (67.69%), Query Frame = 0
BLAST of Csor.00g042850 vs. ExPASy TrEMBL
Match: A0A2K3KAU6 (Uncharacterized protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g061602 PE=4 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 5.03e-05 Identity = 32/56 (57.14%), Postives = 37/56 (66.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|