Csor.00g042580 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g042580
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RING-type E3 ubiquitin transferase
Location	Csor_Chr07: 6264444 .. 6265322 (+)
RNA-Seq Expression	Csor.00g042580
Synteny	Csor.00g042580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAGTGGGCAGAACACCCATTGGTGTTATAGATGCAGAAGGTCGATACGTCTTTGTGGTCGAGATGCAGTTTGCCCCAACTGTAATGGAGGATTCATTCAAGAACTCGACGACATGGTGCCTGGAAACCCGTTTGATTTCTTTGGTCTGGATCATGACGAAGACCGTGATCATGGGCTGGGAGCGTTCTCTGCTTTTATGAGACAACGGTTAGCCGAACGAAACGACATGAGGGGAAGATCAGAGTCACTTTTCGAGCGTAACCCAGGATTTGGCCCTCTATTAATATTTGGTGGTCAAATTCCTTTGAGAAACCGTAGGCTAGAAGCTCTCTTCAATGGGGCTCCTGGCATTGGAATTACACGGGGTGATGGTGGTGACTACTTCATAGGCCCTGGACTGGAGGAGCTATTCGAACAGCTTTCGGAAAATGGTCATCGTGGTCCTCCACCGGCATCTAGATCATTGATTGACGCTATGCCAACGGTTAAGATCACGCAGCGACATCTTCGCTCAGATTCACATTGTCCAGTTTGCAAAGAAAAATTTGAACTGGGATCTGAAGCAAGGCAGATGGCCTGTAATCACATGTACCACTCAGATTGTATAGTTCCATGGCTGGTTCAGCACAACTCTTGCCCTGTCTGCCGCCAGGAACTGCCACCACAGGTAATGGGGGCCGCGGGCCATAACACCAACAGTCAAAACCGAAACAACAGCTACAACAACAATGGCAATGGCTCCTCCAGGGTTAATCCAGGAAGGCGGAATCCATTCTCTTATCTGTGGCCATTTCGGTCATCGAATTCTAGCTCCAACCATGGCGGAGCAGGGAGCAGTGAATCGAGGAACCACCAGATGGGGTATTCGGGATAA

mRNA sequence

ATGTCGAGTGGGCAGAACACCCATTGGTGTTATAGATGCAGAAGGTCGATACGTCTTTGTGGTCGAGATGCAGTTTGCCCCAACTGTAATGGAGGATTCATTCAAGAACTCGACGACATGGTGCCTGGAAACCCGTTTGATTTCTTTGGTCTGGATCATGACGAAGACCGTGATCATGGGCTGGGAGCGTTCTCTGCTTTTATGAGACAACGGTTAGCCGAACGAAACGACATGAGGGGAAGATCAGAGTCACTTTTCGAGCGTAACCCAGGATTTGGCCCTCTATTAATATTTGGTGGTCAAATTCCTTTGAGAAACCGTAGGCTAGAAGCTCTCTTCAATGGGGCTCCTGGCATTGGAATTACACGGGGTGATGGTGGTGACTACTTCATAGGCCCTGGACTGGAGGAGCTATTCGAACAGCTTTCGGAAAATGGTCATCGTGGTCCTCCACCGGCATCTAGATCATTGATTGACGCTATGCCAACGGTTAAGATCACGCAGCGACATCTTCGCTCAGATTCACATTGTCCAGTTTGCAAAGAAAAATTTGAACTGGGATCTGAAGCAAGGCAGATGGCCTGTAATCACATGTACCACTCAGATTGTATAGTTCCATGGCTGGTTCAGCACAACTCTTGCCCTGTCTGCCGCCAGGAACTGCCACCACAGGTAATGGGGGCCGCGGGCCATAACACCAACAGTCAAAACCGAAACAACAGCTACAACAACAATGGCAATGGCTCCTCCAGGGTTAATCCAGGAAGGCGGAATCCATTCTCTTATCTGTGGCCATTTCGGTCATCGAATTCTAGCTCCAACCATGGCGGAGCAGGGAGCAGTGAATCGAGGAACCACCAGATGGGGTATTCGGGATAA

Coding sequence (CDS)

ATGTCGAGTGGGCAGAACACCCATTGGTGTTATAGATGCAGAAGGTCGATACGTCTTTGTGGTCGAGATGCAGTTTGCCCCAACTGTAATGGAGGATTCATTCAAGAACTCGACGACATGGTGCCTGGAAACCCGTTTGATTTCTTTGGTCTGGATCATGACGAAGACCGTGATCATGGGCTGGGAGCGTTCTCTGCTTTTATGAGACAACGGTTAGCCGAACGAAACGACATGAGGGGAAGATCAGAGTCACTTTTCGAGCGTAACCCAGGATTTGGCCCTCTATTAATATTTGGTGGTCAAATTCCTTTGAGAAACCGTAGGCTAGAAGCTCTCTTCAATGGGGCTCCTGGCATTGGAATTACACGGGGTGATGGTGGTGACTACTTCATAGGCCCTGGACTGGAGGAGCTATTCGAACAGCTTTCGGAAAATGGTCATCGTGGTCCTCCACCGGCATCTAGATCATTGATTGACGCTATGCCAACGGTTAAGATCACGCAGCGACATCTTCGCTCAGATTCACATTGTCCAGTTTGCAAAGAAAAATTTGAACTGGGATCTGAAGCAAGGCAGATGGCCTGTAATCACATGTACCACTCAGATTGTATAGTTCCATGGCTGGTTCAGCACAACTCTTGCCCTGTCTGCCGCCAGGAACTGCCACCACAGGTAATGGGGGCCGCGGGCCATAACACCAACAGTCAAAACCGAAACAACAGCTACAACAACAATGGCAATGGCTCCTCCAGGGTTAATCCAGGAAGGCGGAATCCATTCTCTTATCTGTGGCCATTTCGGTCATCGAATTCTAGCTCCAACCATGGCGGAGCAGGGAGCAGTGAATCGAGGAACCACCAGATGGGGTATTCGGGATAA

Protein sequence

MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHGLGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIGITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGAAGHNTNSQNRNNSYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG

Homology

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BLAST of Csor.00g042580 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 5.8e-86
Identity = 184/324 (56.79%), Postives = 225/324 (69.44%), Query Frame = 0


Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFF----GLDHDED 60
           MSS +NTHWC+RC+R++RL G++ VC  C GGF++EL DM   +PFD F    G+   + 
Sbjct: 1   MSSSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEEL-DMAQASPFDMFRSHRGVVERDQ 60

Query: 61  RDHGLGAFSAFMRQRLAERN---DMRGRSESLFERN-PGFGPLLIFGGQIPLR---NRRL 120
               + AFS FMR RLAER+   ++RGR+ S    N PG  PLLIFGGQ+P R   +  +
Sbjct: 61  TFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDNAV 120

Query: 121 EALFN-GAPGIGITRGDGGDYFIGPGLEELFEQLSE-NGHRGPPPASRSLIDAMPTVKIT 180
           EALFN G+PGIGITRG+ GDYF GPGLEELFEQLS     RGPPPA RS IDA+PT+KI 
Sbjct: 121 EALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIA 180

Query: 181 QRHLR-SDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVM 240
           QRHLR SDS+CPVCK++FELGSEA+QM CNH+YHSDCIVPWLVQHNSCPVCRQELP    
Sbjct: 181 QRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSASG 240

Query: 241 GAAGHNTNSQNRN-NSYNNNGNGSSRVNPG-RRNPFSYLWPFRSSNSSS----NHGGAGS 293
            ++  N  +  RN  S +++ + +SR N   RRNPFS  WPFRSS SSS    N GG  +
Sbjct: 241 PSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRSSGSSSSSTQNRGGTRN 300

[Close]

BLAST of Csor.00g042580 vs. ExPASy Swiss-Prot
Match: Q94AK4 (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 4.6e-75
Identity = 167/306 (54.58%), Postives = 206/306 (67.32%), Query Frame = 0


Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MSS +NTHWC+RC+R++ L  RDAVC  C GGF++E+ D+ P           D +RD  
Sbjct: 1   MSSIRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEI-DIGPSR------AHRDVERDPT 60

Query: 61  ---LGAFSAFMRQRLAERN---DMRGRSESL-FERNPGFGPLLIFGGQIPLR-----NRR 120
              + AFSAFMR RLAER+   ++ GR  S   E      PLLIFGGQ P R     N  
Sbjct: 61  FDLMEAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSS 120

Query: 121 LEALFNG-APGIGITRG-DGGDYFIGPGLEELFEQLSE-NGHRGPPPASRSLIDAMPTVK 180
           +EA  NG APGIGI RG + GDYF GPGLEEL EQLS    HRGPPPA +S IDA+PT+K
Sbjct: 121 VEAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHRGPPPAPKSSIDALPTIK 180

Query: 181 ITQRHLR-SDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQ 240
           ITQ+HL+ SDSHCPVCK++FEL SEA+QM C+H+YHSDCIVPWLVQHNSCPVCR+ELP +
Sbjct: 181 ITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSR 240

Query: 241 VMGAAGHNTNSQNRNNSYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESR 291
             G++    +SQNR    + NG  +SR    RRN FS LWPFRSS+SSS      ++ + 
Sbjct: 241 --GSSSSTQSSQNR----STNGRENSR----RRNIFSNLWPFRSSSSSSTQNRRDTNNTA 289

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BLAST of Csor.00g042580 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.0e-33
Identity = 103/318 (32.39%), Postives = 151/318 (47.48%), Query Frame = 0


Query: 9   WCYRCRRSIRL---CGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDE---------- 68
           +CY+C +++ +      D  CP CN GF++E +D  P    +F     D           
Sbjct: 22  FCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNFNPNSSDSFFPMADPFST 81

Query: 69  ----------DRDHGLGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQI-PL 128
                         G+   S F           + RS     ++  F P       +  L
Sbjct: 82  LLPLIFGSSAAAPSGMDFMSLF-----GPSMQPQARSTQQNPQSDAFDPFTFLQNHLQTL 141

Query: 129 RN--RRLEALFNGAPGIGITR--GDGGDYFIGPGLEELFEQLSEN--GHRGPPPASRSLI 188
           R+     E +    P     R  G+ GDYF GPGLE+L +QL+EN     G PPAS+S I
Sbjct: 142 RSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAI 201

Query: 189 DAMPTVKITQRHLRSD-SHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVC 248
           DA+PTVK+T+  L+S+ + C VC ++FE GS+ +QM C H++H DC++PWL  HNSCPVC
Sbjct: 202 DALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVC 261

Query: 249 RQELPPQVMGAAGHNTNSQNRNNSYNNNGNGSSRVNPGRRNPFSYL--WPFRSSNSSSNH 289
           R ELP         + + +NR+     +G+G   V   +   FS    WPFR  + S + 
Sbjct: 262 RFELPTD-------DPDYENRSQGSQGSGDGQGSVEGQQTPRFSIQLPWPFRRQDGSGSG 321

[Close]

BLAST of Csor.00g042580 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.6e-33
Identity = 98/299 (32.78%), Postives = 147/299 (49.16%), Query Frame = 0


Query: 9   WCYRCRRSIRLC----GRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHGL--- 68
           +CY+C R++ +       D  CP CN GF++E D+  P     F   + +    H L   
Sbjct: 24  FCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNPNQGSGFLNPNPNSIPFHDLFLT 83

Query: 69  --GAFSAFMRQRL-AERNDMRGRSESLFERNP--------GFGPLLIFGGQIPLRNRRLE 128
               F++ +     +  +     S S+   NP        G G    F     ++N   +
Sbjct: 84  LSDPFASLLPLLFPSSSSTTTSSSASIDPNNPSLSGPTRSGRGDPFAFDPFTFIQNHLND 143

Query: 129 ALFNGAPGIGITRGDG-----------GDYFIGPGLEELFEQLSEN--GHRGPPPASRSL 188
              +GA    + + +            GDYFIGPGLE+L +QL+EN     G PPAS+S 
Sbjct: 144 LRSSGAQIEFVIQNNPSDQGFRLPANIGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSA 203

Query: 189 IDAMPTVKITQRHLRSD-SHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPV 248
           I+A+P V IT+ +L S+ + C VC + FE G+EA+QM C H+YH DC++PWL  HNSCPV
Sbjct: 204 IEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPV 263

Query: 249 CRQELPP-------QVMGAAGHNTNSQNRNNSYNNNGNGSSRVNPGRRNPFSYLWPFRS 269
           CR ELP        +V GA G +  +   N+   ++G+  +     R    S  WPF++
Sbjct: 264 CRHELPTDDPDYERRVRGAQGTSGGNDGDNSGQRSDGDNRTVERSFR---ISLPWPFQA 319

[Close]

BLAST of Csor.00g042580 vs. ExPASy Swiss-Prot
Match: Q9SNB6 (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 8.6e-29
Identity = 78/246 (31.71%), Postives = 112/246 (45.53%), Query Frame = 0


Query: 7   THWCYRCRRSIRL-----CGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHGL 66
           ++WCY C R I +          +CP CNGGFI+E++             D        +
Sbjct: 30  SYWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIE-------------DSSNSTVAAI 89

Query: 67  GAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIF----------------GGQIPLR 126
            A +  +R        +  R  S   R   F P+++                 G      
Sbjct: 90  PASTPEVRSVEETHRSIIRRRRS--NRRTSFNPVIVLHGGGGGGAGERVENEEGDGATRE 149

Query: 127 NRRLEALFNGAPGIGI--TRGDGGDYFIGPGLEELFEQLSE-------NGHRGPPPASRS 186
            R  E  ++   G G+        +  +G G E L EQLS+        G  G PPAS+S
Sbjct: 150 RRAYEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKS 209

Query: 187 LIDAMPTVKITQRHLRSDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPV 223
            I+++P V+I+  H +++++C VC E FE G E R+M C H++H DCIVPWL   NSCPV
Sbjct: 210 AIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPV 260

[Close]

BLAST of Csor.00g042580 vs. NCBI nr
Match: KAG6595443.1 (putative E3 ubiquitin-protein ligase RHC1A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 607 bits (1564), Expect = 2.97e-219
Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 0


Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG
Sbjct: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG 120
           LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG
Sbjct: 61  LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG 120

Query: 121 ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180
           ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC
Sbjct: 121 ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180

Query: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGAAGHNTNSQNRNN 240
           KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGAAGHNTNSQNRNN
Sbjct: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGAAGHNTNSQNRNN 240

Query: 241 SYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG 292
           SYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG
Sbjct: 241 SYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG 292

[Close]

BLAST of Csor.00g042580 vs. NCBI nr
Match: XP_022924954.1 (probable E3 ubiquitin-protein ligase RHC1A [Cucurbita moschata] >XP_022924955.1 probable E3 ubiquitin-protein ligase RHC1A [Cucurbita moschata])

HSP 1 Score: 604 bits (1557), Expect = 3.47e-218
Identity = 290/292 (99.32%), Postives = 291/292 (99.66%), Query Frame = 0


Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG
Sbjct: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG 120
           LGAFSAFMRQRLAERNDMRGR+ESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG
Sbjct: 61  LGAFSAFMRQRLAERNDMRGRAESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG 120

Query: 121 ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180
           ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC
Sbjct: 121 ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180

Query: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGAAGHNTNSQNRNN 240
           KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMG AGHNTNSQNRNN
Sbjct: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGGAGHNTNSQNRNN 240

Query: 241 SYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG 292
           SYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG
Sbjct: 241 SYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG 292

[Close]

BLAST of Csor.00g042580 vs. NCBI nr
Match: KAG7027443.1 (putative E3 ubiquitin-protein ligase RHC1A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 603 bits (1556), Expect = 4.93e-218
Identity = 291/292 (99.66%), Postives = 291/292 (99.66%), Query Frame = 0


Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MSSGQNTHWCYRCRRSIRLCGRDAVC NCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG
Sbjct: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCSNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG 120
           LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG
Sbjct: 61  LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG 120

Query: 121 ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180
           ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC
Sbjct: 121 ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180

Query: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGAAGHNTNSQNRNN 240
           KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGAAGHNTNSQNRNN
Sbjct: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGAAGHNTNSQNRNN 240

Query: 241 SYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG 292
           SYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG
Sbjct: 241 SYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG 292

[Close]

BLAST of Csor.00g042580 vs. NCBI nr
Match: XP_023517925.1 (probable E3 ubiquitin-protein ligase RHC1A [Cucurbita pepo subsp. pepo] >XP_023517926.1 probable E3 ubiquitin-protein ligase RHC1A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 601 bits (1550), Expect = 4.05e-217
Identity = 289/292 (98.97%), Postives = 289/292 (98.97%), Query Frame = 0


Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG
Sbjct: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG 120
           LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG
Sbjct: 61  LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG 120

Query: 121 ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180
           ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC
Sbjct: 121 ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180

Query: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGAAGHNTNSQNRNN 240
           KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMG  GHNTNSQNRNN
Sbjct: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGGGGHNTNSQNRNN 240

Query: 241 SYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG 292
           SYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNH MGYSG
Sbjct: 241 SYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHPMGYSG 292

[Close]

BLAST of Csor.00g042580 vs. NCBI nr
Match: XP_022966412.1 (probable E3 ubiquitin-protein ligase RHC1A [Cucurbita maxima] >XP_022966413.1 probable E3 ubiquitin-protein ligase RHC1A [Cucurbita maxima])

HSP 1 Score: 591 bits (1523), Expect = 5.30e-213
Identity = 285/292 (97.60%), Postives = 286/292 (97.95%), Query Frame = 0


Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLD DEDRDHG
Sbjct: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDPDEDRDHG 60

Query: 61  LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG 120
           LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEA FNGAPGIG
Sbjct: 61  LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEAFFNGAPGIG 120

Query: 121 ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180
           ITRGD GDY IGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC
Sbjct: 121 ITRGDSGDYVIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180

Query: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGAAGHNTNSQNRNN 240
           KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMG  GHNTNSQNRNN
Sbjct: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGGEGHNTNSQNRNN 240

Query: 241 SYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG 292
           SYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESR+HQMGYSG
Sbjct: 241 SYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRDHQMGYSG 292

[Close]

BLAST of Csor.00g042580 vs. ExPASy TrEMBL
Match: A0A6J1EAP6 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111432344 PE=4 SV=1)

HSP 1 Score: 604 bits (1557), Expect = 1.68e-218
Identity = 290/292 (99.32%), Postives = 291/292 (99.66%), Query Frame = 0


Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG
Sbjct: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG 120
           LGAFSAFMRQRLAERNDMRGR+ESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG
Sbjct: 61  LGAFSAFMRQRLAERNDMRGRAESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG 120

Query: 121 ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180
           ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC
Sbjct: 121 ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180

Query: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGAAGHNTNSQNRNN 240
           KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMG AGHNTNSQNRNN
Sbjct: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGGAGHNTNSQNRNN 240

Query: 241 SYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG 292
           SYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG
Sbjct: 241 SYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG 292

[Close]

BLAST of Csor.00g042580 vs. ExPASy TrEMBL
Match: A0A6J1HS23 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111466070 PE=4 SV=1)

HSP 1 Score: 591 bits (1523), Expect = 2.57e-213
Identity = 285/292 (97.60%), Postives = 286/292 (97.95%), Query Frame = 0


Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLD DEDRDHG
Sbjct: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDPDEDRDHG 60

Query: 61  LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG 120
           LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEA FNGAPGIG
Sbjct: 61  LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEAFFNGAPGIG 120

Query: 121 ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180
           ITRGD GDY IGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC
Sbjct: 121 ITRGDSGDYVIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180

Query: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGAAGHNTNSQNRNN 240
           KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMG  GHNTNSQNRNN
Sbjct: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGGEGHNTNSQNRNN 240

Query: 241 SYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG 292
           SYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESR+HQMGYSG
Sbjct: 241 SYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRDHQMGYSG 292

[Close]

BLAST of Csor.00g042580 vs. ExPASy TrEMBL
Match: A0A0A0L0T9 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_4G419610 PE=4 SV=1)

HSP 1 Score: 549 bits (1414), Expect = 1.37e-196
Identity = 268/294 (91.16%), Postives = 279/294 (94.90%), Query Frame = 0


Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MS+G+NTHWCYRCRRS+RL GRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG
Sbjct: 1   MSAGRNTHWCYRCRRSVRLRGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG 120
           LGAFSAFMRQRLAERNDMRGRSESLFE +PGFGPLLIFGGQIPLRN RLEALFNGAPGIG
Sbjct: 61  LGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG 120

Query: 121 ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180
           ITRGD GDYFIGPGLEELFEQLSENGHRGPPPASRS IDAMPTVKITQRHLRSDSHCPVC
Sbjct: 121 ITRGDSGDYFIGPGLEELFEQLSENGHRGPPPASRSSIDAMPTVKITQRHLRSDSHCPVC 180

Query: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGAAG--HNTNSQNR 240
           KEKFELGSEARQMACNHMYHSDCIVPWL+QHNSCPVCRQELPPQ +G  G  H+TN QNR
Sbjct: 181 KEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPPQGIGGGGGGHSTNDQNR 240

Query: 241 NNSYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG 292
           +NSYNN G+GS RVNPGRRNPFSYLWPFRSS+S+SNHGGAGSSE  NHQMGYSG
Sbjct: 241 SNSYNN-GSGS-RVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSG 292

[Close]

BLAST of Csor.00g042580 vs. ExPASy TrEMBL
Match: A0A1S3C178 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103495857 PE=4 SV=1)

HSP 1 Score: 543 bits (1398), Expect = 3.77e-194
Identity = 264/294 (89.80%), Postives = 277/294 (94.22%), Query Frame = 0


Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MS+G+NTHWCYRCRRS+RLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG
Sbjct: 1   MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG 120
           LGAFSAFMRQRLAERNDMRGRSESLFE +PGFGPLLIFGGQIPLRN RLEALFNGAPGIG
Sbjct: 61  LGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG 120

Query: 121 ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180
           ITRGD GDYFIGPGLEELFE+LS NGHRGPPPASRS IDAMPTVKIT RHLRSDSHCPVC
Sbjct: 121 ITRGDSGDYFIGPGLEELFERLSANGHRGPPPASRSSIDAMPTVKITHRHLRSDSHCPVC 180

Query: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGAAG--HNTNSQNR 240
           KEKFELGSEARQMACNHMYHSDCIVPWL+QHNSCPVCRQELP Q +G  G  H+TN QNR
Sbjct: 181 KEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQGIGGGGGGHSTNDQNR 240

Query: 241 NNSYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG 292
           +NSY+N G+GS RVNPGRRNPFSYLWPFRSS+S+SNHGGAGSSE  NHQMGYSG
Sbjct: 241 SNSYSN-GSGS-RVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSG 292

[Close]

BLAST of Csor.00g042580 vs. ExPASy TrEMBL
Match: A0A5A7SIY2 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G00710 PE=4 SV=1)

HSP 1 Score: 543 bits (1398), Expect = 3.77e-194
Identity = 264/294 (89.80%), Postives = 277/294 (94.22%), Query Frame = 0


Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MS+G+NTHWCYRCRRS+RLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG
Sbjct: 1   MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG 120
           LGAFSAFMRQRLAERNDMRGRSESLFE +PGFGPLLIFGGQIPLRN RLEALFNGAPGIG
Sbjct: 61  LGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG 120

Query: 121 ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180
           ITRGD GDYFIGPGLEELFE+LS NGHRGPPPASRS IDAMPTVKIT RHLRSDSHCPVC
Sbjct: 121 ITRGDSGDYFIGPGLEELFERLSANGHRGPPPASRSSIDAMPTVKITHRHLRSDSHCPVC 180

Query: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGAAG--HNTNSQNR 240
           KEKFELGSEARQMACNHMYHSDCIVPWL+QHNSCPVCRQELP Q +G  G  H+TN QNR
Sbjct: 181 KEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQGIGGGGGGHSTNDQNR 240

Query: 241 NNSYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG 292
           +NSY+N G+GS RVNPGRRNPFSYLWPFRSS+S+SNHGGAGSSE  NHQMGYSG
Sbjct: 241 SNSYSN-GSGS-RVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSG 292

[Close]

BLAST of Csor.00g042580 vs. TAIR 10
Match: AT2G40830.2 (RING-H2 finger C1A )

HSP 1 Score: 318.9 bits (816), Expect = 4.2e-87
Identity = 184/324 (56.79%), Postives = 225/324 (69.44%), Query Frame = 0


Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFF----GLDHDED 60
           MSS +NTHWC+RC+R++RL G++ VC  C GGF++EL DM   +PFD F    G+   + 
Sbjct: 1   MSSSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEEL-DMAQASPFDMFRSHRGVVERDQ 60

Query: 61  RDHGLGAFSAFMRQRLAERN---DMRGRSESLFERN-PGFGPLLIFGGQIPLR---NRRL 120
               + AFS FMR RLAER+   ++RGR+ S    N PG  PLLIFGGQ+P R   +  +
Sbjct: 61  TFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDNAV 120

Query: 121 EALFN-GAPGIGITRGDGGDYFIGPGLEELFEQLSE-NGHRGPPPASRSLIDAMPTVKIT 180
           EALFN G+PGIGITRG+ GDYF GPGLEELFEQLS     RGPPPA RS IDA+PT+KI 
Sbjct: 121 EALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIA 180

Query: 181 QRHLR-SDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVM 240
           QRHLR SDS+CPVCK++FELGSEA+QM CNH+YHSDCIVPWLVQHNSCPVCRQELP    
Sbjct: 181 QRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSASG 240

Query: 241 GAAGHNTNSQNRN-NSYNNNGNGSSRVNPG-RRNPFSYLWPFRSSNSSS----NHGGAGS 293
            ++  N  +  RN  S +++ + +SR N   RRNPFS  WPFRSS SSS    N GG  +
Sbjct: 241 PSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRSSGSSSSSTQNRGGTRN 300

[Close]

BLAST of Csor.00g042580 vs. TAIR 10
Match: AT2G40830.1 (RING-H2 finger C1A )

HSP 1 Score: 318.9 bits (816), Expect = 4.2e-87
Identity = 184/324 (56.79%), Postives = 225/324 (69.44%), Query Frame = 0


Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFF----GLDHDED 60
           MSS +NTHWC+RC+R++RL G++ VC  C GGF++EL DM   +PFD F    G+   + 
Sbjct: 1   MSSSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEEL-DMAQASPFDMFRSHRGVVERDQ 60

Query: 61  RDHGLGAFSAFMRQRLAERN---DMRGRSESLFERN-PGFGPLLIFGGQIPLR---NRRL 120
               + AFS FMR RLAER+   ++RGR+ S    N PG  PLLIFGGQ+P R   +  +
Sbjct: 61  TFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDNAV 120

Query: 121 EALFN-GAPGIGITRGDGGDYFIGPGLEELFEQLSE-NGHRGPPPASRSLIDAMPTVKIT 180
           EALFN G+PGIGITRG+ GDYF GPGLEELFEQLS     RGPPPA RS IDA+PT+KI 
Sbjct: 121 EALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIA 180

Query: 181 QRHLR-SDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVM 240
           QRHLR SDS+CPVCK++FELGSEA+QM CNH+YHSDCIVPWLVQHNSCPVCRQELP    
Sbjct: 181 QRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSASG 240

Query: 241 GAAGHNTNSQNRN-NSYNNNGNGSSRVNPG-RRNPFSYLWPFRSSNSSS----NHGGAGS 293
            ++  N  +  RN  S +++ + +SR N   RRNPFS  WPFRSS SSS    N GG  +
Sbjct: 241 PSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRSSGSSSSSTQNRGGTRN 300

[Close]

BLAST of Csor.00g042580 vs. TAIR 10
Match: AT2G40830.3 (RING-H2 finger C1A )

HSP 1 Score: 318.9 bits (816), Expect = 4.2e-87
Identity = 184/324 (56.79%), Postives = 225/324 (69.44%), Query Frame = 0


Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFF----GLDHDED 60
           MSS +NTHWC+RC+R++RL G++ VC  C GGF++EL DM   +PFD F    G+   + 
Sbjct: 1   MSSSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEEL-DMAQASPFDMFRSHRGVVERDQ 60

Query: 61  RDHGLGAFSAFMRQRLAERN---DMRGRSESLFERN-PGFGPLLIFGGQIPLR---NRRL 120
               + AFS FMR RLAER+   ++RGR+ S    N PG  PLLIFGGQ+P R   +  +
Sbjct: 61  TFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDNAV 120

Query: 121 EALFN-GAPGIGITRGDGGDYFIGPGLEELFEQLSE-NGHRGPPPASRSLIDAMPTVKIT 180
           EALFN G+PGIGITRG+ GDYF GPGLEELFEQLS     RGPPPA RS IDA+PT+KI 
Sbjct: 121 EALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIA 180

Query: 181 QRHLR-SDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVM 240
           QRHLR SDS+CPVCK++FELGSEA+QM CNH+YHSDCIVPWLVQHNSCPVCRQELP    
Sbjct: 181 QRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSASG 240

Query: 241 GAAGHNTNSQNRN-NSYNNNGNGSSRVNPG-RRNPFSYLWPFRSSNSSS----NHGGAGS 293
            ++  N  +  RN  S +++ + +SR N   RRNPFS  WPFRSS SSS    N GG  +
Sbjct: 241 PSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRSSGSSSSSTQNRGGTRN 300

[Close]

BLAST of Csor.00g042580 vs. TAIR 10
Match: AT3G56580.2 (RING/U-box superfamily protein )

HSP 1 Score: 282.7 bits (722), Expect = 3.3e-76
Identity = 167/306 (54.58%), Postives = 206/306 (67.32%), Query Frame = 0


Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MSS +NTHWC+RC+R++ L  RDAVC  C GGF++E+ D+ P           D +RD  
Sbjct: 1   MSSIRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEI-DIGPSR------AHRDVERDPT 60

Query: 61  ---LGAFSAFMRQRLAERN---DMRGRSESL-FERNPGFGPLLIFGGQIPLR-----NRR 120
              + AFSAFMR RLAER+   ++ GR  S   E      PLLIFGGQ P R     N  
Sbjct: 61  FDLMEAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSS 120

Query: 121 LEALFNG-APGIGITRG-DGGDYFIGPGLEELFEQLSE-NGHRGPPPASRSLIDAMPTVK 180
           +EA  NG APGIGI RG + GDYF GPGLEEL EQLS    HRGPPPA +S IDA+PT+K
Sbjct: 121 VEAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHRGPPPAPKSSIDALPTIK 180

Query: 181 ITQRHLR-SDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQ 240
           ITQ+HL+ SDSHCPVCK++FEL SEA+QM C+H+YHSDCIVPWLVQHNSCPVCR+ELP +
Sbjct: 181 ITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSR 240

Query: 241 VMGAAGHNTNSQNRNNSYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESR 291
             G++    +SQNR    + NG  +SR    RRN FS LWPFRSS+SSS      ++ + 
Sbjct: 241 --GSSSSTQSSQNR----STNGRENSR----RRNIFSNLWPFRSSSSSSTQNRRDTNNTA 289

[Close]

BLAST of Csor.00g042580 vs. TAIR 10
Match: AT3G56580.1 (RING/U-box superfamily protein )

HSP 1 Score: 282.7 bits (722), Expect = 3.3e-76
Identity = 167/306 (54.58%), Postives = 206/306 (67.32%), Query Frame = 0


Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MSS +NTHWC+RC+R++ L  RDAVC  C GGF++E+ D+ P           D +RD  
Sbjct: 1   MSSIRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEI-DIGPSR------AHRDVERDPT 60

Query: 61  ---LGAFSAFMRQRLAERN---DMRGRSESL-FERNPGFGPLLIFGGQIPLR-----NRR 120
              + AFSAFMR RLAER+   ++ GR  S   E      PLLIFGGQ P R     N  
Sbjct: 61  FDLMEAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSS 120

Query: 121 LEALFNG-APGIGITRG-DGGDYFIGPGLEELFEQLSE-NGHRGPPPASRSLIDAMPTVK 180
           +EA  NG APGIGI RG + GDYF GPGLEEL EQLS    HRGPPPA +S IDA+PT+K
Sbjct: 121 VEAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHRGPPPAPKSSIDALPTIK 180

Query: 181 ITQRHLR-SDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQ 240
           ITQ+HL+ SDSHCPVCK++FEL SEA+QM C+H+YHSDCIVPWLVQHNSCPVCR+ELP +
Sbjct: 181 ITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSR 240

Query: 241 VMGAAGHNTNSQNRNNSYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESR 291
             G++    +SQNR    + NG  +SR    RRN FS LWPFRSS+SSS      ++ + 
Sbjct: 241 --GSSSSTQSSQNR----STNGRENSR----RRNIFSNLWPFRSSSSSSTQNRRDTNNTA 289

The following BLAST results are available for this feature:

BLAST of Csor.00g042580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22197	5.8e-86	56.79	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q94AK4	4.6e-75	54.58	E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV...	[more]
Q8LPN7	2.0e-33	32.39	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
P0CH30	2.6e-33	32.78	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q9SNB6	8.6e-29	31.71	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ...	[more]

BLAST of Csor.00g042580 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6595443.1	2.97e-219	100.00	putative E3 ubiquitin-protein ligase RHC1A, partial [Cucurbita argyrosperma subs...	[more]
XP_022924954.1	3.47e-218	99.32	probable E3 ubiquitin-protein ligase RHC1A [Cucurbita moschata] >XP_022924955.1 ...	[more]
KAG7027443.1	4.93e-218	99.66	putative E3 ubiquitin-protein ligase RHC1A, partial [Cucurbita argyrosperma subs...	[more]
XP_023517925.1	4.05e-217	98.97	probable E3 ubiquitin-protein ligase RHC1A [Cucurbita pepo subsp. pepo] >XP_0235...	[more]
XP_022966412.1	5.30e-213	97.60	probable E3 ubiquitin-protein ligase RHC1A [Cucurbita maxima] >XP_022966413.1 pr...	[more]

BLAST of Csor.00g042580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EAP6	1.68e-218	99.32	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111432344...	[more]
A0A6J1HS23	2.57e-213	97.60	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111466070 P...	[more]
A0A0A0L0T9	1.37e-196	91.16	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_4G419610 PE...	[more]
A0A1S3C178	3.77e-194	89.80	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103495857 PE=4 ...	[more]
A0A5A7SIY2	3.77e-194	89.80	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]

BLAST of Csor.00g042580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40830.2	4.2e-87	56.79	RING-H2 finger C1A	[more]
AT2G40830.1	4.2e-87	56.79	RING-H2 finger C1A	[more]
AT2G40830.3	4.2e-87	56.79	RING-H2 finger C1A	[more]
AT3G56580.2	3.3e-76	54.58	RING/U-box superfamily protein	[more]
AT3G56580.1	3.3e-76	54.58	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 177..217 e-value: 1.0E-6 score: 38.3
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 176..218 e-value: 2.0E-10 score: 40.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 177..218 score: 11.972923
IPR039525	E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon	PFAM	PF14369	zinc_ribbon_9	coord: 6..37 e-value: 8.6E-11 score: 41.9
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 139..225 e-value: 1.0E-21 score: 78.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 269..292
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..256
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..257
None	No IPR available	PANTHER	PTHR15710:SF86	E3 UBIQUITIN-PROTEIN LIGASE RHC1A-RELATED	coord: 2..283
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 2..283
None	No IPR available	CDD	cd16667	RING-H2_RNF126_like	coord: 177..218 e-value: 3.07579E-23 score: 87.7584
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 156..224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g042580.m01	Csor.00g042580.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0061630	ubiquitin protein ligase activity