Csor.00g039040 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g039040
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RAB GTPase homolog C2A
Location	Csor_Chr09: 11406055 .. 11410012 (-)
RNA-Seq Expression	Csor.00g039040
Synteny	Csor.00g039040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATCGCCGTCCGGCCAGATCAGTGGCTACGATCTCTCATTTAAGGTGCTTCTTATCGGCGATTCCGGCGTCGGTAAAAGTAGCCTTCTACACACCTTCATTTCCGCCTCTGTCGACAATCTCACTCCTACAATTGGTACTTCCTTTTTCTAACTCAATCGATTATGTTCCTTCTCTTTATCTACTCTTAATCTGTTTTGTTGCTTCGGAAATTAAGTGATTGAGTTGATTATTTGTGTTGCATTGTGCTTCTTCTAGTAGGTTTCGATTCGTTCATTTGAATTTAATGGAGAAAGTAGAGGAGTTGGAGATTTTAGATTGAGGAAAGTATAGGTGATTTGTGGAATTGAATTTATTCTGATTAGTTGTTCTAAGGGAGAATTTGTGTTCACTGTTATCTATAGGTGTGGATTTCAAGATCAAACAACTTACGATTGGTGGTAAGAGATTGAAGCTGACTATTTGGGATACCGGTAATGAACTGAATCAAATGGATCTCTGTTTTACGTTTTTTATGATTTCAATTTTGGAGTTGGACACTGAACTTTGGATCGTTTTGAAAATTTAAATATAGGTTAAAATATATTTTTAGTAAGATTTTTTAACCTATATTTAAAATTTCAAAATAATGTAAGATTTTTTTGCCTCTATATTTGGCAAGTATTACGATCGAACATCTAGGGTTAAATTTATTTCTGTGATCGAGGCATATTAATAGATAGGTAATTGAATAACTTTTTAATTTGGGATGCTTGATTCACTTACCCATATTTTATCCATAAGTTATTTGTCAATCAAAAAAAAAAAAAAAAATTAATAAGTCAAAGATTTCATTGCGATATTTTTTTTTTTGGACTTGTATTTTAATAGATTGTGGGCAGAGAGGAAAAGATAACTCTTATTTGGAACCGTTTTTTGGTCTCTGTTCTGTTAATTTATGTTGCAATTACACTTTCTTTTCCATTAATGACTGAAGATATTTAAGTTCTCCATGCAAGATGGTCACGCTTGCTTGCTTATAAGTATAAACTAAAAAACAATTCACTCGTCAAAAGGTGGATGGCTTTCTGAAGCATTGAATTATCCATTCAAAATTTGTTGAGAGCTTCAAAGTTAATAATTTAATGTTACTTAAAGAAAAGGTGGCTGACTTATTGAAGATTTAACATGGCGCAGCTGGGCAAGAGAGGTTCAGATCACTAACTAGTTCATACTACAGAGGTGCTCAAGGGATCATTCTTGGTAAGCTATCAAATGGTAATCTTGTGCTTCGACTTAGATGCATTCAGTGATTTACTGTCAGCTTTCAGAGTCCATTGAATGTTCCAAAACATATCAAACGATGTTATTACAATGAATCTCAGCATTTTTGGTATGTTCTGATAGAGTATTGATTGAGCTTGATCATGACACTGAATTAGGAGAAGGATATGCAGAAGATCGTTCGTTATTTTTCTTCTTTTTCTCTAAAACCTCTTTTACAATTAACGAATTGGGAATTATTTATAGATTCATTTTGTTGAATTCCCTCTGAACTCAAATTACGGTCAAGATGGGACTAGTTATTTCAGTCATTGGATGAATATTTGATAGCACCCATCTGATTGATGGGTATTTTTGGATAGAACTTTATTGTTTATGTTTCATTCTTTTCTATTTCCTCTTTTAAAAGAAGTGCACATTCGTTGTGAAATGTGTTAGTTCTCATCAAACTCTTTAGATCCTAAAGTAAGAATTCATGGAGAATTCTAAATTCGCACTTTCTTATATTACATTACTTTTGGTCTAGTGATATTGTTTTAATTTTTGTTTGTCTTAGTATATGATGTGACTCGGAGAGAAACCTTTACAAACCTATTGGATGTATGGGCAAATGAAGTTGAGCTTTATTTGACAAATCAGGACTGTGTCAAGATGCTCGTTGGAAACAAAGTTGATAGGGTAAGTTCTTTGTATCTCTTACGACACTCATGGTCAATACAGTTTATAAATGTATAAACTAGGATGTCTATGTGTAAAATGGAAGGATTAGATACTAATGACTTTATCGAAAATGGCATGATAATCTGATCTGAAAGGACCTCAGACCCTTACGTATATGAGGATGCTTAGTCGCATTACTCTATACTAGAGGGAGGTTTCCACACCCTTATAAGGAATGCTTCGTTCCCCTCCTCAATCGATGTGGGATCTCATAATCCACCCTCCTTGGGAGCCCAACGTTCTCACTGGCACACTGCTCGGTGTCTTGCTCTGATACCATTTGTAACAGCTCAAAACCACCGCTAGTAGATATTGTTCGCTTTGACCCTTTACGTATCGCCGTCAACCTCACGGTTGGAGAGGAGAACGAAGCATTCCTTTTAAGGGTGTAGAAACCTCTCCTTAATAGACGCGTTTTAAAACTGTGAGGCTGGCGGTGATACGTAATGGGTCAAAGCAGACAATATTTGCTACTAGTGGGTTTGGATTGTTACAAATGATATTAGAGCCAGGCACCGAGCGGTGTACCAACAGGGACATTGGCCCCCAGGAGGGGTGGATTGTGAGATCCCACGTTAGTTGGAGAGGGAAACAAAACATTTCTTATAAGGGTAACAAAACATTTCTTATAACGGTGTGGAAACATCTTCCTAATAGACACGTTATAAAATCATGAAGCTGACGGAGATACGTAACGGGCCAAAGAAGACAATATCTGCGCACAATTTATTAATGTGTTGCATTAATCTCAGGAATCTGAAAGGGCTGTAAGCAGAGAAGATGGGATTGCACTTGCCAACAAGCTTGGATCTTTGTTTCTTGAATGCAGCGCTAAAACCAGAGAAAATGTAGCGAAATGTTTTGAAGAACTTGCAATTAAGGTACTTTTTAACACAACAGTTATCATTTAATTACGTTAGAAAGAAAACCAATGACATTTTACATGTGAATATGATATGCAAAAACATAGCAGATTAGCTGTTGGTGGACACAGTAAATAGTTTAAGAAGTTGAGTGTAAAAATGGTTGTTTCCTTTTAAATACCGAAACTTGTAGCCAATAGTAATAGTGATCCGTGTAACAGCCCAAGTCCACCGCTAGCCAATATTGTCTATTTTGGGCTTCCCTCAAGATTCTTAAAACGCGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAAAATATTTCGTTCCTCTCTCCAACCAATTTGGGATCTCATAATCCACCTCCCTTCGGGGTCCAACGTTCTCGTTGATACTCGTTCCTCTTTCTAATGGATGTGGGATCTCACAATCCACCCCCCTTCGAAGCCCAGAGTCCTCGCTAGCACTCGTTCCTCTTTCCAATCGATTTGGGATCTCACAATCTAGCGTCCTCTCTAGCACACCACCCGGAACCAGACTCTGATACCATTGTAACGACCCAAGCCCATTGCTAGTAGATATAGTCTTCTTTGGGCTTTCCCTCAAGGTTTTTAAAACTCGTCTGCTAGGGAGAGGTTTCCACGCCCTTATAAAAAATGTTGTTCCTCTCCCCATCTCACAATCAGTTCCAATGACAGGGCATAGGGAGCGGAAAAGATTCTCTATTTTAACTTTTATATATGATTTTTCAACTATGAACGTTTAGGAGGACAAATAAGTGAGGAAAAAAACATAAACGTATTAACATTTTTATATAATCTTCTCGATTTCAACAAGCCGAGGGGGCGATTTCCCGCCCTTGATCTATAGAGAATTTGGCAAACAACAACACTTATAGAATTACCGTCATATAAAGGAAGCTCCCAAGAATCTAGGAAACATGACATTATTGTTTGGAAACTTTGCATATTCAAATGTTGTTTGTAAATATTGTGCAGATAATGGAGGTTCCGAGTTTCTTGGAGGAAAGATCCAGTGTGGTAAAGAGGAACATGTTAAGGCAAAAGCAGGAAAGTCAAGGTCAACGAAGTGGTGGTTGTTGCTCTTAG

mRNA sequence

ATGGGATCGCCGTCCGGCCAGATCAGTGGCTACGATCTCTCATTTAAGGTGCTTCTTATCGGCGATTCCGGCGTCGGTAAAAGTAGCCTTCTACACACCTTCATTTCCGCCTCTGTCGACAATCTCACTCCTACAATTGGTGTGGATTTCAAGATCAAACAACTTACGATTGGTGGTAAGAGATTGAAGCTGACTATTTGGGATACCGCTGGGCAAGAGAGGTTCAGATCACTAACTAGTTCATACTACAGAGGTGCTCAAGGGATCATTCTTGTATATGATGTGACTCGGAGAGAAACCTTTACAAACCTATTGGATGTATGGGCAAATGAAGTTGAGCTTTATTTGACAAATCAGGACTGTGTCAAGATGCTCGTTGGAAACAAAGTTGATAGGGAATCTGAAAGGGCTGTAAGCAGAGAAGATGGGATTGCACTTGCCAACAAGCTTGGATCTTTGTTTCTTGAATGCAGCGCTAAAACCAGAGAAAATGTAGCGAAATGTTTTGAAGAACTTGCAATTAAGATAATGGAGGTTCCGAGTTTCTTGGAGGAAAGATCCAGTGTGGTAAAGAGGAACATGTTAAGGCAAAAGCAGGAAAGTCAAGGTCAACGAAGTGGTGGTTGTTGCTCTTAG

Coding sequence (CDS)

ATGGGATCGCCGTCCGGCCAGATCAGTGGCTACGATCTCTCATTTAAGGTGCTTCTTATCGGCGATTCCGGCGTCGGTAAAAGTAGCCTTCTACACACCTTCATTTCCGCCTCTGTCGACAATCTCACTCCTACAATTGGTGTGGATTTCAAGATCAAACAACTTACGATTGGTGGTAAGAGATTGAAGCTGACTATTTGGGATACCGCTGGGCAAGAGAGGTTCAGATCACTAACTAGTTCATACTACAGAGGTGCTCAAGGGATCATTCTTGTATATGATGTGACTCGGAGAGAAACCTTTACAAACCTATTGGATGTATGGGCAAATGAAGTTGAGCTTTATTTGACAAATCAGGACTGTGTCAAGATGCTCGTTGGAAACAAAGTTGATAGGGAATCTGAAAGGGCTGTAAGCAGAGAAGATGGGATTGCACTTGCCAACAAGCTTGGATCTTTGTTTCTTGAATGCAGCGCTAAAACCAGAGAAAATGTAGCGAAATGTTTTGAAGAACTTGCAATTAAGATAATGGAGGTTCCGAGTTTCTTGGAGGAAAGATCCAGTGTGGTAAAGAGGAACATGTTAAGGCAAAAGCAGGAAAGTCAAGGTCAACGAAGTGGTGGTTGTTGCTCTTAG

Protein sequence

MGSPSGQISGYDLSFKVLLIGDSGVGKSSLLHTFISASVDNLTPTIGVDFKIKQLTIGGKRLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFTNLLDVWANEVELYLTNQDCVKMLVGNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENVAKCFEELAIKIMEVPSFLEERSSVVKRNMLRQKQESQGQRSGGCCS

Homology

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BLAST of Csor.00g039040 vs. ExPASy Swiss-Prot
Match: O49841 (Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 2.0e-91
Identity = 169/211 (80.09%), Postives = 189/211 (89.57%), Query Frame = 0


Query: 1   MGSPSGQISGYDLSFKVLLIGDSGVGKSSLLHTFISASVDNLTPTIGVDFKIKQLTIGGK 60
           MGS SGQ SGYDLSFK+LLIGDSGVGKSSLL +FIS+SV++L PTIGVDFKIKQLT+GGK
Sbjct: 1   MGSSSGQ-SGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGK 60

Query: 61  RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFTNLLDVWANEVELYLTNQD 120
           RLKLTIWDTAGQERFR+LTSSYYRGAQGIILVYDVTRRETFTNL+DVW  E+ELY TNQ+
Sbjct: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQE 120

Query: 121 CVKMLVGNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENVAKCFEELAIKIMEVP 180
           CV+MLVGNKVDRESER VSRE+GIALA +L  +FLECSA+TR+NV +CFEELA+KIMEVP
Sbjct: 121 CVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVP 180

Query: 181 SFLEERSSVVKRNMLRQKQESQGQRSGGCCS 212
           S LEE SS VKRN+L+QK E Q     GCCS
Sbjct: 181 SLLEEGSSAVKRNILKQKPEHQTNTQSGCCS 210

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BLAST of Csor.00g039040 vs. ExPASy Swiss-Prot
Match: Q9SF92 (Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 2.7e-80
Identity = 155/211 (73.46%), Postives = 175/211 (82.94%), Query Frame = 0


Query: 1   MGSPSGQISGYDLSFKVLLIGDSGVGKSSLLHTFISASVDNLTPTIGVDFKIKQLTIGGK 60
           MGS SGQ SGYDLSFK+LLIGDSGVGKSSLL +FIS+SV++L PTIGVDFKIKQ+ + GK
Sbjct: 1   MGSSSGQ-SGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGK 60

Query: 61  RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFTNLLDVWANEVELYLTNQD 120
           RLKLTIWDTAGQE+FR+LTSSY+RG+QGIILVYDVT+RETF NL D+WA E+ELY TN D
Sbjct: 61  RLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHD 120

Query: 121 CVKMLVGNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENVAKCFEELAIKIMEVP 180
           C+KMLVGNKVDRESER VSRE+G+ALA  L  LF ECSA+TRENV  CFEELA+KIMEVP
Sbjct: 121 CIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVP 180

Query: 181 SFLEERSSVVKRNMLRQKQESQGQRSGGCCS 212
           S LEE SS VKR      +       G CCS
Sbjct: 181 SLLEEGSSSVKR------KPDYRAHQGRCCS 204

[Close]

BLAST of Csor.00g039040 vs. ExPASy Swiss-Prot
Match: O23657 (Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 7.5e-75
Identity = 144/212 (67.92%), Postives = 171/212 (80.66%), Query Frame = 0


Query: 1   MGSPSGQISGYDLSFKVLLIGDSGVGKSSLLHTFISASVDNLTPTIGVDFKIKQLTIGGK 60
           MGS SGQ   +D  FKVLLIGDSGVGKSSLL +F S + D+L+PTIGVDFK+K LTIG K
Sbjct: 1   MGSSSGQ-PEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEK 60

Query: 61  RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFTNLLDVWANEVELYLTNQD 120
           +LKL IWDTAGQERFR+LTSSYYRGAQGII+VYDVTRR+TFTNL D+WA E++LY TNQD
Sbjct: 61  KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQD 120

Query: 121 CVKMLVGNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENVAKCFEELAIKIMEVP 180
           C+KMLVGNKVD+ESERAVS+++GI  A + G LFLECSAKTR NV +CFEEL +KI+E P
Sbjct: 121 CIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETP 180

Query: 181 SFLEERSSVVKRNMLRQK-QESQGQRSGGCCS 212
           S   E SS  K+N+ +Q   ++    S  CCS
Sbjct: 181 SLTAEGSSGGKKNIFKQNPAQTTSTSSSYCCS 211

[Close]

BLAST of Csor.00g039040 vs. ExPASy Swiss-Prot
Match: Q6DHC1 (Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 6.4e-50
Identity = 108/197 (54.82%), Postives = 136/197 (69.04%), Query Frame = 0


Query: 14  SFKVLLIGDSGVGKSSLLHTFISASVD-NLTPTIGVDFKIKQLTIGGKRLKLTIWDTAGQ 73
           + K+L+IG+SGVGKSSLL  F   + D  L  TIGVDFK+K + I G R KL IWDTAGQ
Sbjct: 8   TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIWDTAGQ 67

Query: 74  ERFRSLTSSYYRGAQGIILVYDVTRRETFTNLLDVWANEVELYLTNQDCVKMLVGNKVDR 133
           ERFR+LT SYYRGAQG+ILVYDVT+R+TFT  L+ W NE+E Y T  D VKMLVGNK+D+
Sbjct: 68  ERFRTLTPSYYRGAQGVILVYDVTKRDTFTK-LENWLNELETYCTRNDLVKMLVGNKIDK 127

Query: 134 ESERAVSREDGIALANKLGSLFLECSAKTRENVAKCFEELAIKIMEVPSFLEERSSVVKR 193
           ++ R V R +G+  A K   LF+E SAKTR+ V   FEEL  KI++ P   E  SS+   
Sbjct: 128 DN-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGLWE--SSIQNH 187

Query: 194 NMLRQKQESQGQRSGGC 210
            +  Q  +++ QR G C
Sbjct: 188 GV--QLSDNEPQRQGAC 198

[Close]

BLAST of Csor.00g039040 vs. ExPASy Swiss-Prot
Match: P36862 (GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.1e-49
Identity = 101/178 (56.74%), Postives = 127/178 (71.35%), Query Frame = 0


Query: 8   ISGYDLSFKVLLIGDSGVGKSSLLHTFISASV-DNLTPTIGVDFKIKQLTIGGKRLKLTI 67
           +  +D +FKVLL+GDSGVGKS +L  F S    ++ T TIGVDFK+K LT  GKR KLTI
Sbjct: 3   VDSHDYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTI 62

Query: 68  WDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFTNLLDVWANEVELYLTNQDCVKMLV 127
           WDTAGQERFR+LTSSYYRGAQGII VYDVTRR+TF +L   W  E ++Y T +  +KM+V
Sbjct: 63  WDTAGQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVV 122

Query: 128 GNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENVAKCFEELAIKIMEVPSFLE 185
            NKVD  ++R VS E+G   A + G LF+E SA+    V + FEEL +KI++ P  LE
Sbjct: 123 ANKVDLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAFEELLLKILDTPLLLE 180

[Close]

BLAST of Csor.00g039040 vs. NCBI nr
Match: XP_022925432.1 (ras-related protein RABC2a-like [Cucurbita moschata] >XP_023535218.1 ras-related protein RABC2a-like [Cucurbita pepo subsp. pepo] >KAG6592319.1 Ras-related protein RABC2a, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025141.1 Ras-related protein RABC2a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 414 bits (1063), Expect = 1.38e-145
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MGSPSGQISGYDLSFKVLLIGDSGVGKSSLLHTFISASVDNLTPTIGVDFKIKQLTIGGK 60
           MGSPSGQISGYDLSFKVLLIGDSGVGKSSLLHTFISASVDNLTPTIGVDFKIKQLTIGGK
Sbjct: 1   MGSPSGQISGYDLSFKVLLIGDSGVGKSSLLHTFISASVDNLTPTIGVDFKIKQLTIGGK 60

Query: 61  RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFTNLLDVWANEVELYLTNQD 120
           RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFTNLLDVWANEVELYLTNQD
Sbjct: 61  RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFTNLLDVWANEVELYLTNQD 120

Query: 121 CVKMLVGNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENVAKCFEELAIKIMEVP 180
           CVKMLVGNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENVAKCFEELAIKIMEVP
Sbjct: 121 CVKMLVGNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENVAKCFEELAIKIMEVP 180

Query: 181 SFLEERSSVVKRNMLRQKQESQGQRSGGCCS 211
           SFLEERSSVVKRNMLRQKQESQGQRSGGCCS
Sbjct: 181 SFLEERSSVVKRNMLRQKQESQGQRSGGCCS 211

[Close]

BLAST of Csor.00g039040 vs. NCBI nr
Match: XP_022973510.1 (ras-related protein RABC2a-like [Cucurbita maxima] >XP_022973511.1 ras-related protein RABC2a-like [Cucurbita maxima])

HSP 1 Score: 410 bits (1053), Expect = 4.63e-144
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MGSPSGQISGYDLSFKVLLIGDSGVGKSSLLHTFISASVDNLTPTIGVDFKIKQLTIGGK 60
           MGSPSGQISGYDLSFKVLLIGDSGVGKSSLLHTFISASVDNLTPTIGVDFKIKQLTIGGK
Sbjct: 1   MGSPSGQISGYDLSFKVLLIGDSGVGKSSLLHTFISASVDNLTPTIGVDFKIKQLTIGGK 60

Query: 61  RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFTNLLDVWANEVELYLTNQD 120
           RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFTNLLDVWANEVELYLTNQD
Sbjct: 61  RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFTNLLDVWANEVELYLTNQD 120

Query: 121 CVKMLVGNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENVAKCFEELAIKIMEVP 180
           CVKMLVGNKVDRESE AVSREDGIALANKLGSLFLECSAKTRENVAKCFEELAIKIMEVP
Sbjct: 121 CVKMLVGNKVDRESESAVSREDGIALANKLGSLFLECSAKTRENVAKCFEELAIKIMEVP 180

Query: 181 SFLEERSSVVKRNMLRQKQESQGQRSGGCCS 211
           SFLEERSSVVKRNMLRQKQE QGQRSGGCCS
Sbjct: 181 SFLEERSSVVKRNMLRQKQEGQGQRSGGCCS 211

[Close]

BLAST of Csor.00g039040 vs. NCBI nr
Match: XP_038884336.1 (ras-related protein RABC2a-like isoform X2 [Benincasa hispida])

HSP 1 Score: 384 bits (987), Expect = 1.26e-133
Identity = 194/211 (91.94%), Postives = 203/211 (96.21%), Query Frame = 0


Query: 1   MGSPSGQISGYDLSFKVLLIGDSGVGKSSLLHTFISASVDNLTPTIGVDFKIKQLTIGGK 60
           MGSPS QI+ Y LSFKVLLIGDSGVGKSSLLHTFISAS+ +LTPTIGVDFKIKQLTIGGK
Sbjct: 25  MGSPSSQINAYHLSFKVLLIGDSGVGKSSLLHTFISASLHDLTPTIGVDFKIKQLTIGGK 84

Query: 61  RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFTNLLDVWANEVELYLTNQD 120
           RLKLTIWDTAGQERFRSLTSSYYRG QGIILVYDVTRRETFTNLLDVWANEVELYLT+QD
Sbjct: 85  RLKLTIWDTAGQERFRSLTSSYYRGTQGIILVYDVTRRETFTNLLDVWANEVELYLTDQD 144

Query: 121 CVKMLVGNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENVAKCFEELAIKIMEVP 180
           CVKMLVGNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENV KCFEELA+KIMEVP
Sbjct: 145 CVKMLVGNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENVEKCFEELAVKIMEVP 204

Query: 181 SFLEERSSVVKRNMLRQKQESQGQRSGGCCS 211
           SFLEERS+++KRN+LRQKQESQ Q SGGCCS
Sbjct: 205 SFLEERSTMLKRNILRQKQESQAQHSGGCCS 235

[Close]

BLAST of Csor.00g039040 vs. NCBI nr
Match: XP_022143972.1 (ras-related protein RABC2a-like [Momordica charantia])

HSP 1 Score: 366 bits (939), Expect = 1.10e-126
Identity = 184/211 (87.20%), Postives = 198/211 (93.84%), Query Frame = 0


Query: 1   MGSPSGQISGYDLSFKVLLIGDSGVGKSSLLHTFISASVDNLTPTIGVDFKIKQLTIGGK 60
           MGS S   + YDLSFKVLLIGDSGVGKSSLL TF+S+S+ +L PTIGVDFKIKQLT+GGK
Sbjct: 1   MGSSSAHTAAYDLSFKVLLIGDSGVGKSSLLLTFVSSSLLDLAPTIGVDFKIKQLTVGGK 60

Query: 61  RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFTNLLDVWANEVELYLTNQD 120
           RLKLTIWDTAGQERFR+LTSSYYRGAQGIILVYDVTRRE+F NL D+WANEVELYLT+QD
Sbjct: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRESFINLSDIWANEVELYLTDQD 120

Query: 121 CVKMLVGNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENVAKCFEELAIKIMEVP 180
           CVKMLVGNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENV KCFEELAIKIMEVP
Sbjct: 121 CVKMLVGNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENVEKCFEELAIKIMEVP 180

Query: 181 SFLEERSSVVKRNMLRQKQESQGQRSGGCCS 211
           SFLEERS+V+KRN+LRQKQE Q Q+SGGCCS
Sbjct: 181 SFLEERSTVIKRNILRQKQEGQAQQSGGCCS 211

[Close]

BLAST of Csor.00g039040 vs. NCBI nr
Match: XP_008463077.1 (PREDICTED: ras-related protein RABC2a-like [Cucumis melo] >KAA0034999.1 ras-related protein RABC2a-like [Cucumis melo var. makuwa] >TYK02339.1 ras-related protein RABC2a-like [Cucumis melo var. makuwa])

HSP 1 Score: 365 bits (938), Expect = 1.41e-126
Identity = 187/211 (88.63%), Postives = 198/211 (93.84%), Query Frame = 0


Query: 1   MGSPSGQISGYDLSFKVLLIGDSGVGKSSLLHTFISASVDNLTPTIGVDFKIKQLTIGGK 60
           MGSPS  ++   LSFKVLLIGDS VGKSSLLHTFISAS+ +L+PTIGVDFKIKQLT+GGK
Sbjct: 1   MGSPSPHLN---LSFKVLLIGDSAVGKSSLLHTFISASLHDLSPTIGVDFKIKQLTVGGK 60

Query: 61  RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFTNLLDVWANEVELYLTNQD 120
           RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETF NLLDVWANEVELYLT+QD
Sbjct: 61  RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQD 120

Query: 121 CVKMLVGNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENVAKCFEELAIKIMEVP 180
           CVKMLVGNKVDRESER VSREDGIALANKLGSLF ECSAKTRENV KCFEELAIKIMEVP
Sbjct: 121 CVKMLVGNKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVP 180

Query: 181 SFLEERSSVVKRNMLRQKQESQGQRSGGCCS 211
           SFLEERSS+VKR++LRQKQE Q Q+SGGCCS
Sbjct: 181 SFLEERSSLVKRSILRQKQEGQAQQSGGCCS 208

[Close]

BLAST of Csor.00g039040 vs. ExPASy TrEMBL
Match: A0A6J1EBP4 (ras-related protein RABC2a-like OS=Cucurbita moschata OX=3662 GN=LOC111432728 PE=4 SV=1)

HSP 1 Score: 414 bits (1063), Expect = 6.70e-146
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MGSPSGQISGYDLSFKVLLIGDSGVGKSSLLHTFISASVDNLTPTIGVDFKIKQLTIGGK 60
           MGSPSGQISGYDLSFKVLLIGDSGVGKSSLLHTFISASVDNLTPTIGVDFKIKQLTIGGK
Sbjct: 1   MGSPSGQISGYDLSFKVLLIGDSGVGKSSLLHTFISASVDNLTPTIGVDFKIKQLTIGGK 60

Query: 61  RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFTNLLDVWANEVELYLTNQD 120
           RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFTNLLDVWANEVELYLTNQD
Sbjct: 61  RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFTNLLDVWANEVELYLTNQD 120

Query: 121 CVKMLVGNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENVAKCFEELAIKIMEVP 180
           CVKMLVGNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENVAKCFEELAIKIMEVP
Sbjct: 121 CVKMLVGNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENVAKCFEELAIKIMEVP 180

Query: 181 SFLEERSSVVKRNMLRQKQESQGQRSGGCCS 211
           SFLEERSSVVKRNMLRQKQESQGQRSGGCCS
Sbjct: 181 SFLEERSSVVKRNMLRQKQESQGQRSGGCCS 211

[Close]

BLAST of Csor.00g039040 vs. ExPASy TrEMBL
Match: A0A6J1I8U9 (ras-related protein RABC2a-like OS=Cucurbita maxima OX=3661 GN=LOC111472047 PE=4 SV=1)

HSP 1 Score: 410 bits (1053), Expect = 2.24e-144
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MGSPSGQISGYDLSFKVLLIGDSGVGKSSLLHTFISASVDNLTPTIGVDFKIKQLTIGGK 60
           MGSPSGQISGYDLSFKVLLIGDSGVGKSSLLHTFISASVDNLTPTIGVDFKIKQLTIGGK
Sbjct: 1   MGSPSGQISGYDLSFKVLLIGDSGVGKSSLLHTFISASVDNLTPTIGVDFKIKQLTIGGK 60

Query: 61  RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFTNLLDVWANEVELYLTNQD 120
           RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFTNLLDVWANEVELYLTNQD
Sbjct: 61  RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFTNLLDVWANEVELYLTNQD 120

Query: 121 CVKMLVGNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENVAKCFEELAIKIMEVP 180
           CVKMLVGNKVDRESE AVSREDGIALANKLGSLFLECSAKTRENVAKCFEELAIKIMEVP
Sbjct: 121 CVKMLVGNKVDRESESAVSREDGIALANKLGSLFLECSAKTRENVAKCFEELAIKIMEVP 180

Query: 181 SFLEERSSVVKRNMLRQKQESQGQRSGGCCS 211
           SFLEERSSVVKRNMLRQKQE QGQRSGGCCS
Sbjct: 181 SFLEERSSVVKRNMLRQKQEGQGQRSGGCCS 211

[Close]

BLAST of Csor.00g039040 vs. ExPASy TrEMBL
Match: A0A6J1CSC9 (ras-related protein RABC2a-like OS=Momordica charantia OX=3673 GN=LOC111013757 PE=4 SV=1)

HSP 1 Score: 366 bits (939), Expect = 5.35e-127
Identity = 184/211 (87.20%), Postives = 198/211 (93.84%), Query Frame = 0


Query: 1   MGSPSGQISGYDLSFKVLLIGDSGVGKSSLLHTFISASVDNLTPTIGVDFKIKQLTIGGK 60
           MGS S   + YDLSFKVLLIGDSGVGKSSLL TF+S+S+ +L PTIGVDFKIKQLT+GGK
Sbjct: 1   MGSSSAHTAAYDLSFKVLLIGDSGVGKSSLLLTFVSSSLLDLAPTIGVDFKIKQLTVGGK 60

Query: 61  RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFTNLLDVWANEVELYLTNQD 120
           RLKLTIWDTAGQERFR+LTSSYYRGAQGIILVYDVTRRE+F NL D+WANEVELYLT+QD
Sbjct: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRESFINLSDIWANEVELYLTDQD 120

Query: 121 CVKMLVGNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENVAKCFEELAIKIMEVP 180
           CVKMLVGNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENV KCFEELAIKIMEVP
Sbjct: 121 CVKMLVGNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENVEKCFEELAIKIMEVP 180

Query: 181 SFLEERSSVVKRNMLRQKQESQGQRSGGCCS 211
           SFLEERS+V+KRN+LRQKQE Q Q+SGGCCS
Sbjct: 181 SFLEERSTVIKRNILRQKQEGQAQQSGGCCS 211

[Close]

BLAST of Csor.00g039040 vs. ExPASy TrEMBL
Match: A0A5D3BW44 (Ras-related protein RABC2a-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00280 PE=4 SV=1)

HSP 1 Score: 365 bits (938), Expect = 6.83e-127
Identity = 187/211 (88.63%), Postives = 198/211 (93.84%), Query Frame = 0


Query: 1   MGSPSGQISGYDLSFKVLLIGDSGVGKSSLLHTFISASVDNLTPTIGVDFKIKQLTIGGK 60
           MGSPS  ++   LSFKVLLIGDS VGKSSLLHTFISAS+ +L+PTIGVDFKIKQLT+GGK
Sbjct: 1   MGSPSPHLN---LSFKVLLIGDSAVGKSSLLHTFISASLHDLSPTIGVDFKIKQLTVGGK 60

Query: 61  RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFTNLLDVWANEVELYLTNQD 120
           RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETF NLLDVWANEVELYLT+QD
Sbjct: 61  RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQD 120

Query: 121 CVKMLVGNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENVAKCFEELAIKIMEVP 180
           CVKMLVGNKVDRESER VSREDGIALANKLGSLF ECSAKTRENV KCFEELAIKIMEVP
Sbjct: 121 CVKMLVGNKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVP 180

Query: 181 SFLEERSSVVKRNMLRQKQESQGQRSGGCCS 211
           SFLEERSS+VKR++LRQKQE Q Q+SGGCCS
Sbjct: 181 SFLEERSSLVKRSILRQKQEGQAQQSGGCCS 208

[Close]

BLAST of Csor.00g039040 vs. ExPASy TrEMBL
Match: A0A1S3CID4 (ras-related protein RABC2a-like OS=Cucumis melo OX=3656 GN=LOC103501313 PE=4 SV=1)

HSP 1 Score: 365 bits (938), Expect = 6.83e-127
Identity = 187/211 (88.63%), Postives = 198/211 (93.84%), Query Frame = 0


Query: 1   MGSPSGQISGYDLSFKVLLIGDSGVGKSSLLHTFISASVDNLTPTIGVDFKIKQLTIGGK 60
           MGSPS  ++   LSFKVLLIGDS VGKSSLLHTFISAS+ +L+PTIGVDFKIKQLT+GGK
Sbjct: 1   MGSPSPHLN---LSFKVLLIGDSAVGKSSLLHTFISASLHDLSPTIGVDFKIKQLTVGGK 60

Query: 61  RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFTNLLDVWANEVELYLTNQD 120
           RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETF NLLDVWANEVELYLT+QD
Sbjct: 61  RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQD 120

Query: 121 CVKMLVGNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENVAKCFEELAIKIMEVP 180
           CVKMLVGNKVDRESER VSREDGIALANKLGSLF ECSAKTRENV KCFEELAIKIMEVP
Sbjct: 121 CVKMLVGNKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVP 180

Query: 181 SFLEERSSVVKRNMLRQKQESQGQRSGGCCS 211
           SFLEERSS+VKR++LRQKQE Q Q+SGGCCS
Sbjct: 181 SFLEERSSLVKRSILRQKQEGQAQQSGGCCS 208

[Close]

BLAST of Csor.00g039040 vs. TAIR 10
Match: AT5G03530.1 (RAB GTPase homolog C2A )

HSP 1 Score: 336.7 bits (862), Expect = 1.4e-92
Identity = 169/211 (80.09%), Postives = 189/211 (89.57%), Query Frame = 0


Query: 1   MGSPSGQISGYDLSFKVLLIGDSGVGKSSLLHTFISASVDNLTPTIGVDFKIKQLTIGGK 60
           MGS SGQ SGYDLSFK+LLIGDSGVGKSSLL +FIS+SV++L PTIGVDFKIKQLT+GGK
Sbjct: 1   MGSSSGQ-SGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGK 60

Query: 61  RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFTNLLDVWANEVELYLTNQD 120
           RLKLTIWDTAGQERFR+LTSSYYRGAQGIILVYDVTRRETFTNL+DVW  E+ELY TNQ+
Sbjct: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQE 120

Query: 121 CVKMLVGNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENVAKCFEELAIKIMEVP 180
           CV+MLVGNKVDRESER VSRE+GIALA +L  +FLECSA+TR+NV +CFEELA+KIMEVP
Sbjct: 121 CVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVP 180

Query: 181 SFLEERSSVVKRNMLRQKQESQGQRSGGCCS 212
           S LEE SS VKRN+L+QK E Q     GCCS
Sbjct: 181 SLLEEGSSAVKRNILKQKPEHQTNTQSGCCS 210

[Close]

BLAST of Csor.00g039040 vs. TAIR 10
Match: AT3G09910.1 (RAB GTPase homolog C2B )

HSP 1 Score: 299.7 bits (766), Expect = 1.9e-81
Identity = 155/211 (73.46%), Postives = 175/211 (82.94%), Query Frame = 0


Query: 1   MGSPSGQISGYDLSFKVLLIGDSGVGKSSLLHTFISASVDNLTPTIGVDFKIKQLTIGGK 60
           MGS SGQ SGYDLSFK+LLIGDSGVGKSSLL +FIS+SV++L PTIGVDFKIKQ+ + GK
Sbjct: 1   MGSSSGQ-SGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGK 60

Query: 61  RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFTNLLDVWANEVELYLTNQD 120
           RLKLTIWDTAGQE+FR+LTSSY+RG+QGIILVYDVT+RETF NL D+WA E+ELY TN D
Sbjct: 61  RLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHD 120

Query: 121 CVKMLVGNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENVAKCFEELAIKIMEVP 180
           C+KMLVGNKVDRESER VSRE+G+ALA  L  LF ECSA+TRENV  CFEELA+KIMEVP
Sbjct: 121 CIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVP 180

Query: 181 SFLEERSSVVKRNMLRQKQESQGQRSGGCCS 212
           S LEE SS VKR      +       G CCS
Sbjct: 181 SLLEEGSSSVKR------KPDYRAHQGRCCS 204

[Close]

BLAST of Csor.00g039040 vs. TAIR 10
Match: AT3G09910.2 (RAB GTPase homolog C2B )

HSP 1 Score: 299.7 bits (766), Expect = 1.9e-81
Identity = 155/211 (73.46%), Postives = 175/211 (82.94%), Query Frame = 0


Query: 1   MGSPSGQISGYDLSFKVLLIGDSGVGKSSLLHTFISASVDNLTPTIGVDFKIKQLTIGGK 60
           MGS SGQ SGYDLSFK+LLIGDSGVGKSSLL +FIS+SV++L PTIGVDFKIKQ+ + GK
Sbjct: 1   MGSSSGQ-SGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGK 60

Query: 61  RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFTNLLDVWANEVELYLTNQD 120
           RLKLTIWDTAGQE+FR+LTSSY+RG+QGIILVYDVT+RETF NL D+WA E+ELY TN D
Sbjct: 61  RLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHD 120

Query: 121 CVKMLVGNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENVAKCFEELAIKIMEVP 180
           C+KMLVGNKVDRESER VSRE+G+ALA  L  LF ECSA+TRENV  CFEELA+KIMEVP
Sbjct: 121 CIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVP 180

Query: 181 SFLEERSSVVKRNMLRQKQESQGQRSGGCCS 212
           S LEE SS VKR      +       G CCS
Sbjct: 181 SLLEEGSSSVKR------KPDYRAHQGRCCS 204

[Close]

BLAST of Csor.00g039040 vs. TAIR 10
Match: AT3G09910.3 (RAB GTPase homolog C2B )

HSP 1 Score: 299.7 bits (766), Expect = 1.9e-81
Identity = 155/211 (73.46%), Postives = 175/211 (82.94%), Query Frame = 0


Query: 1   MGSPSGQISGYDLSFKVLLIGDSGVGKSSLLHTFISASVDNLTPTIGVDFKIKQLTIGGK 60
           MGS SGQ SGYDLSFK+LLIGDSGVGKSSLL +FIS+SV++L PTIGVDFKIKQ+ + GK
Sbjct: 1   MGSSSGQ-SGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGK 60

Query: 61  RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFTNLLDVWANEVELYLTNQD 120
           RLKLTIWDTAGQE+FR+LTSSY+RG+QGIILVYDVT+RETF NL D+WA E+ELY TN D
Sbjct: 61  RLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHD 120

Query: 121 CVKMLVGNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENVAKCFEELAIKIMEVP 180
           C+KMLVGNKVDRESER VSRE+G+ALA  L  LF ECSA+TRENV  CFEELA+KIMEVP
Sbjct: 121 CIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVP 180

Query: 181 SFLEERSSVVKRNMLRQKQESQGQRSGGCCS 212
           S LEE SS VKR      +       G CCS
Sbjct: 181 SLLEEGSSSVKR------KPDYRAHQGRCCS 204

[Close]

BLAST of Csor.00g039040 vs. TAIR 10
Match: AT1G43890.1 (RAB GTPASE HOMOLOG B18 )

HSP 1 Score: 281.6 bits (719), Expect = 5.3e-76
Identity = 144/212 (67.92%), Postives = 171/212 (80.66%), Query Frame = 0


Query: 1   MGSPSGQISGYDLSFKVLLIGDSGVGKSSLLHTFISASVDNLTPTIGVDFKIKQLTIGGK 60
           MGS SGQ   +D  FKVLLIGDSGVGKSSLL +F S + D+L+PTIGVDFK+K LTIG K
Sbjct: 1   MGSSSGQ-PEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEK 60

Query: 61  RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFTNLLDVWANEVELYLTNQD 120
           +LKL IWDTAGQERFR+LTSSYYRGAQGII+VYDVTRR+TFTNL D+WA E++LY TNQD
Sbjct: 61  KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQD 120

Query: 121 CVKMLVGNKVDRESERAVSREDGIALANKLGSLFLECSAKTRENVAKCFEELAIKIMEVP 180
           C+KMLVGNKVD+ESERAVS+++GI  A + G LFLECSAKTR NV +CFEEL +KI+E P
Sbjct: 121 CIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETP 180

Query: 181 SFLEERSSVVKRNMLRQK-QESQGQRSGGCCS 212
           S   E SS  K+N+ +Q   ++    S  CCS
Sbjct: 181 SLTAEGSSGGKKNIFKQNPAQTTSTSSSYCCS 211

The following BLAST results are available for this feature:

BLAST of Csor.00g039040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49841	2.0e-91	80.09	Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1	[more]
Q9SF92	2.7e-80	73.46	Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1	[more]
O23657	7.5e-75	67.92	Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1	[more]
Q6DHC1	6.4e-50	54.82	Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1	[more]
P36862	1.1e-49	56.74	GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1	[more]

BLAST of Csor.00g039040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925432.1	1.38e-145	100.00	ras-related protein RABC2a-like [Cucurbita moschata] >XP_023535218.1 ras-related...	[more]
XP_022973510.1	4.63e-144	99.05	ras-related protein RABC2a-like [Cucurbita maxima] >XP_022973511.1 ras-related p...	[more]
XP_038884336.1	1.26e-133	91.94	ras-related protein RABC2a-like isoform X2 [Benincasa hispida]	[more]
XP_022143972.1	1.10e-126	87.20	ras-related protein RABC2a-like [Momordica charantia]	[more]
XP_008463077.1	1.41e-126	88.63	PREDICTED: ras-related protein RABC2a-like [Cucumis melo] >KAA0034999.1 ras-rela...	[more]

BLAST of Csor.00g039040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EBP4	6.70e-146	100.00	ras-related protein RABC2a-like OS=Cucurbita moschata OX=3662 GN=LOC111432728 PE...	[more]
A0A6J1I8U9	2.24e-144	99.05	ras-related protein RABC2a-like OS=Cucurbita maxima OX=3661 GN=LOC111472047 PE=4...	[more]
A0A6J1CSC9	5.35e-127	87.20	ras-related protein RABC2a-like OS=Momordica charantia OX=3673 GN=LOC111013757 P...	[more]
A0A5D3BW44	6.83e-127	88.63	Ras-related protein RABC2a-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3CID4	6.83e-127	88.63	ras-related protein RABC2a-like OS=Cucumis melo OX=3656 GN=LOC103501313 PE=4 SV=...	[more]

BLAST of Csor.00g039040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03530.1	1.4e-92	80.09	RAB GTPase homolog C2A	[more]
AT3G09910.1	1.9e-81	73.46	RAB GTPase homolog C2B	[more]
AT3G09910.2	1.9e-81	73.46	RAB GTPase homolog C2B	[more]
AT3G09910.3	1.9e-81	73.46	RAB GTPase homolog C2B	[more]
AT1G43890.1	5.3e-76	67.92	RAB GTPASE HOMOLOG B18	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 119..132 score: 44.01 coord: 55..77 score: 51.04 coord: 154..176 score: 41.6 coord: 37..53 score: 30.18 coord: 15..36 score: 50.83
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 20..208 e-value: 9.3E-4 score: 5.1
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..180 e-value: 0.0048 score: -0.5
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 15..179 e-value: 9.6E-91 score: 317.4
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 12..179 e-value: 3.0E-29 score: 113.1
None	No IPR available	PANTHER	PTHR24073:SF1138	SMALL MONOMERIC GTPASE-RELATED	coord: 1..211
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 1..211
None	No IPR available	PROSITE	PS51420	RHO	coord: 8..177 score: 9.067223
None	No IPR available	PROSITE	PS51419	RAB	coord: 10..210 score: 32.023361
None	No IPR available	CDD	cd01863	Rab18	coord: 15..176 e-value: 1.97498E-94 score: 270.721
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 17..180 e-value: 1.3E-12 score: 41.6
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 16..177 e-value: 1.5E-53 score: 180.7
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 6..211 score: 16.200533
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 15..171 e-value: 6.1E-28 score: 95.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 9..210 e-value: 2.5E-63 score: 215.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g039040.m01	Csor.00g039040.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0012505	endomembrane system
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding