Csor.00g039010 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codonsinglepolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGGCAACAATAGGTCGAAGAAAGCTCACTCATCTTTCTCGATCTTTAACTTTTTCAAATTTAGAAGAGGTAGAAAGGAAGATCACTGCGACCATAGTGGCTGTTGGGACGAGATGCCAAGATCGAACAAGGTATGGCCGAGTGATGAGGACAAAATGCATCGTTGGGTTGCTGAACCGGGCATTGATAGAAAAGCTAAGGATTACATTGACAGGATCTATCGAAACCGTGTTCTTGAATCTGAGCGACAAACTGTTACTTTACCTGCAAGTGGAACAAAACTTGATCTGTAA ATGGGAGGCAACAATAGGTCGAAGAAAGCTCACTCATCTTTCTCGATCTTTAACTTTTTCAAATTTAGAAGAGGTAGAAAGGAAGATCACTGCGACCATAGTGGCTGTTGGGACGAGATGCCAAGATCGAACAAGGTATGGCCGAGTGATGAGGACAAAATGCATCGTTGGGTTGCTGAACCGGGCATTGATAGAAAAGCTAAGGATTACATTGACAGGATCTATCGAAACCGTGTTCTTGAATCTGAGCGACAAACTGTTACTTTACCTGCAAGTGGAACAAAACTTGATCTGTAA ATGGGAGGCAACAATAGGTCGAAGAAAGCTCACTCATCTTTCTCGATCTTTAACTTTTTCAAATTTAGAAGAGGTAGAAAGGAAGATCACTGCGACCATAGTGGCTGTTGGGACGAGATGCCAAGATCGAACAAGGTATGGCCGAGTGATGAGGACAAAATGCATCGTTGGGTTGCTGAACCGGGCATTGATAGAAAAGCTAAGGATTACATTGACAGGATCTATCGAAACCGTGTTCTTGAATCTGAGCGACAAACTGTTACTTTACCTGCAAGTGGAACAAAACTTGATCTGTAA MGGNNRSKKAHSSFSIFNFFKFRRGRKEDHCDHSGCWDEMPRSNKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLESERQTVTLPASGTKLDL Homology
BLAST of Csor.00g039010 vs. NCBI nr
Match: KAG6592316.1 (hypothetical protein SDJN03_14662, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 211 bits (538), Expect = 3.28e-69 Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0
BLAST of Csor.00g039010 vs. NCBI nr
Match: KAG6592314.1 (hypothetical protein SDJN03_14660, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 202 bits (515), Expect = 1.06e-65 Identity = 93/98 (94.90%), Postives = 96/98 (97.96%), Query Frame = 0
BLAST of Csor.00g039010 vs. NCBI nr
Match: KAG6592315.1 (hypothetical protein SDJN03_14661, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 196 bits (498), Expect = 4.17e-63 Identity = 92/98 (93.88%), Postives = 94/98 (95.92%), Query Frame = 0
BLAST of Csor.00g039010 vs. NCBI nr
Match: KAG6592308.1 (hypothetical protein SDJN03_14654, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 194 bits (494), Expect = 1.70e-62 Identity = 90/98 (91.84%), Postives = 94/98 (95.92%), Query Frame = 0
BLAST of Csor.00g039010 vs. NCBI nr
Match: KAG6592307.1 (hypothetical protein SDJN03_14653, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 192 bits (487), Expect = 1.99e-61 Identity = 88/98 (89.80%), Postives = 92/98 (93.88%), Query Frame = 0
BLAST of Csor.00g039010 vs. ExPASy TrEMBL
Match: A0A0A0KAK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014890 PE=4 SV=1) HSP 1 Score: 167 bits (422), Expect = 8.19e-52 Identity = 79/96 (82.29%), Postives = 84/96 (87.50%), Query Frame = 0
BLAST of Csor.00g039010 vs. ExPASy TrEMBL
Match: A0A5A7SWT9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00350 PE=4 SV=1) HSP 1 Score: 166 bits (420), Expect = 1.65e-51 Identity = 78/96 (81.25%), Postives = 85/96 (88.54%), Query Frame = 0
BLAST of Csor.00g039010 vs. ExPASy TrEMBL
Match: A0A0A0KBW1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014870 PE=4 SV=1) HSP 1 Score: 162 bits (411), Expect = 3.78e-50 Identity = 79/96 (82.29%), Postives = 83/96 (86.46%), Query Frame = 0
BLAST of Csor.00g039010 vs. ExPASy TrEMBL
Match: A0A0A0K7Y2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014900 PE=4 SV=1) HSP 1 Score: 161 bits (407), Expect = 1.54e-49 Identity = 77/96 (80.21%), Postives = 83/96 (86.46%), Query Frame = 0
BLAST of Csor.00g039010 vs. ExPASy TrEMBL
Match: A0A0A0K8W0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G016905 PE=4 SV=1) HSP 1 Score: 142 bits (358), Expect = 4.56e-42 Identity = 65/93 (69.89%), Postives = 79/93 (84.95%), Query Frame = 0
BLAST of Csor.00g039010 vs. TAIR 10
Match: AT3G05858.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 77.8 bits (190), Expect = 5.4e-15 Identity = 46/90 (51.11%), Postives = 58/90 (64.44%), Query Frame = 0
BLAST of Csor.00g039010 vs. TAIR 10
Match: AT5G26620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05858.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 62.4 bits (150), Expect = 2.4e-10 Identity = 29/51 (56.86%), Postives = 38/51 (74.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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