Csor.00g037280 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g037280
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	protein translation factor SUI1 homolog
Location	Csor_Chr09: 5034143 .. 5034481 (-)
RNA-Seq Expression	Csor.00g037280
Synteny	Csor.00g037280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGAATTAGACTTCCAGATCCCATCTGCTTTCGATCCATTCGCCGACGCCAAGGATTCTGATGCCCCCGGAACTAAAGCTTATGTTCATATCCGCGTTCAGCAGAGGAATGGCAAAAAGTGCTTGACTACAGTTCAGGGTCTGAAGAAAGAGTTCAGCTACGAGAAGATCCTTAAGGACGTGAAGAAGGAATTCTGCTGTAATGGTAACGTTGTTCAAGACAAAGAATTGGGGAAGATAATCCAACTTCAAGGCGATCAACGCAAAAACGTGTCTCAGTTCCTTGTCCAGGCTGGTCTCGTTAAGAAGGATCAGATCAAAATTCATGGGTTTTGA

mRNA sequence

ATGGTTGAATTAGACTTCCAGATCCCATCTGCTTTCGATCCATTCGCCGACGCCAAGGATTCTGATGCCCCCGGAACTAAAGCTTATGTTCATATCCGCGTTCAGCAGAGGAATGGCAAAAAGTGCTTGACTACAGTTCAGGGTCTGAAGAAAGAGTTCAGCTACGAGAAGATCCTTAAGGACGTGAAGAAGGAATTCTGCTGTAATGGTAACGTTGTTCAAGACAAAGAATTGGGGAAGATAATCCAACTTCAAGGCGATCAACGCAAAAACGTGTCTCAGTTCCTTGTCCAGGCTGGTCTCGTTAAGAAGGATCAGATCAAAATTCATGGGTTTTGA

Coding sequence (CDS)

ATGGTTGAATTAGACTTCCAGATCCCATCTGCTTTCGATCCATTCGCCGACGCCAAGGATTCTGATGCCCCCGGAACTAAAGCTTATGTTCATATCCGCGTTCAGCAGAGGAATGGCAAAAAGTGCTTGACTACAGTTCAGGGTCTGAAGAAAGAGTTCAGCTACGAGAAGATCCTTAAGGACGTGAAGAAGGAATTCTGCTGTAATGGTAACGTTGTTCAAGACAAAGAATTGGGGAAGATAATCCAACTTCAAGGCGATCAACGCAAAAACGTGTCTCAGTTCCTTGTCCAGGCTGGTCTCGTTAAGAAGGATCAGATCAAAATTCATGGGTTTTGA

Protein sequence

MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF

Homology

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BLAST of Csor.00g037280 vs. ExPASy Swiss-Prot
Match: P41568 (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At4g27130 PE=1 SV=2)

HSP 1 Score: 183.7 bits (465), Expect = 1.1e-45
Identity = 91/113 (80.53%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDA-PGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M ELD Q+P+AFDPFADA   D+  GTK YVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of Csor.00g037280 vs. ExPASy Swiss-Prot
Match: Q9SQF4 (Protein translation factor SUI1 homolog OS=Brassica oleracea OX=3712 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 3.3e-45
Identity = 90/113 (79.65%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDA-PGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M ELD Q+P+AFDPFADA   D+  GTK YVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD I+IHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDDIQIHGF 113

[Close]

BLAST of Csor.00g037280 vs. ExPASy Swiss-Prot
Match: Q94JV4 (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g54290 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.3e-45
Identity = 89/113 (78.76%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDA-PGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M +L+ Q+P+AFDPFADA   D+  GTK YVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of Csor.00g037280 vs. ExPASy Swiss-Prot
Match: P56330 (Protein translation factor SUI1 homolog OS=Zea mays OX=4577 GN=TIF PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 2.8e-44
Identity = 87/115 (75.65%), Postives = 99/115 (86.09%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSD---APGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEK 60
           M +LD QIP+AFDPFA+A   D   A G+K YVH+R+QQRNG+K LTTVQGLKKEFSY K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 60

Query: 61  ILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           ILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAG+VKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

[Close]

BLAST of Csor.00g037280 vs. ExPASy Swiss-Prot
Match: A6MZM2 (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica OX=39946 GN=GOS2 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 2.8e-44
Identity = 87/115 (75.65%), Postives = 99/115 (86.09%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSD---APGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEK 60
           M +LD QIP+AFDPFA+A   D   A G+K YVH+R+QQRNG+K LTTVQGLKKEFSY K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60

Query: 61  ILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           ILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAG+VKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

[Close]

BLAST of Csor.00g037280 vs. NCBI nr
Match: XP_022976609.1 (protein translation factor SUI1 homolog 1 [Cucurbita maxima] >XP_022976610.1 protein translation factor SUI1 homolog 1 [Cucurbita maxima] >KAG6592045.1 Protein translation factor SUI1-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 224 bits (572), Expect = 5.97e-74
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of Csor.00g037280 vs. NCBI nr
Match: XP_023536045.1 (protein translation factor SUI1 homolog 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 223 bits (569), Expect = 1.71e-73
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELDFQIPSAFDPFAD+KDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADSKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of Csor.00g037280 vs. NCBI nr
Match: XP_022936190.1 (protein translation factor SUI1 homolog 1 [Cucurbita moschata])

HSP 1 Score: 223 bits (569), Expect = 1.71e-73
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112
           DVKKEFCCNGNVVQD+ELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDRELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of Csor.00g037280 vs. NCBI nr
Match: XP_004139787.1 (protein translation factor SUI1 homolog 1 [Cucumis sativus] >XP_008447738.1 PREDICTED: protein translation factor SUI1 homolog 1-like [Cucumis melo] >XP_038899382.1 protein translation factor SUI1 homolog 1-like [Benincasa hispida] >KGN44162.1 hypothetical protein Csa_015864 [Cucumis sativus])

HSP 1 Score: 223 bits (567), Expect = 3.46e-73
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELDFQIPSAFDPFADAKDSDAPGTK YVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of Csor.00g037280 vs. NCBI nr
Match: KAA0025154.1 (SUI1 domain-containing protein [Cucumis melo var. makuwa] >TYK23112.1 SUI1 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 223 bits (567), Expect = 1.21e-72
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELDFQIPSAFDPFADAKDSDAPGTK YVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 39  MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 98

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 99  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 150

[Close]

BLAST of Csor.00g037280 vs. ExPASy TrEMBL
Match: A0A6J1IJY4 (protein translation factor SUI1 homolog 1 OS=Cucurbita maxima OX=3661 GN=LOC111476953 PE=3 SV=1)

HSP 1 Score: 224 bits (572), Expect = 2.89e-74
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of Csor.00g037280 vs. ExPASy TrEMBL
Match: A0A6J1FCX8 (protein translation factor SUI1 homolog 1 OS=Cucurbita moschata OX=3662 GN=LOC111442862 PE=3 SV=1)

HSP 1 Score: 223 bits (569), Expect = 8.29e-74
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112
           DVKKEFCCNGNVVQD+ELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDRELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of Csor.00g037280 vs. ExPASy TrEMBL
Match: A0A0A0K771 (SUI1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G209580 PE=3 SV=1)

HSP 1 Score: 223 bits (567), Expect = 1.67e-73
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELDFQIPSAFDPFADAKDSDAPGTK YVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of Csor.00g037280 vs. ExPASy TrEMBL
Match: A0A1S3BI45 (protein translation factor SUI1 homolog 1-like OS=Cucumis melo OX=3656 GN=LOC103490142 PE=3 SV=1)

HSP 1 Score: 223 bits (567), Expect = 1.67e-73
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELDFQIPSAFDPFADAKDSDAPGTK YVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of Csor.00g037280 vs. ExPASy TrEMBL
Match: A0A5D3DHR8 (SUI1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001030 PE=3 SV=1)

HSP 1 Score: 223 bits (567), Expect = 5.85e-73
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELDFQIPSAFDPFADAKDSDAPGTK YVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 39  MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 98

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 99  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 150

[Close]

BLAST of Csor.00g037280 vs. TAIR 10
Match: AT5G54940.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 200.3 bits (508), Expect = 8.3e-52
Identity = 95/112 (84.82%), Postives = 104/112 (92.86%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD QIPSA+DPFA+AKDSDAPG K  +HIR+QQRNGKK LTTVQGLKKE+SYE+ILK
Sbjct: 1   MVELDIQIPSAYDPFAEAKDSDAPGAKENIHIRIQQRNGKKSLTTVQGLKKEYSYERILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRK VSQFLVQ G+ KKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQTGIAKKDQIKIHGF 112

[Close]

BLAST of Csor.00g037280 vs. TAIR 10
Match: AT5G54940.2 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 200.3 bits (508), Expect = 8.3e-52
Identity = 95/112 (84.82%), Postives = 104/112 (92.86%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD QIPSA+DPFA+AKDSDAPG K  +HIR+QQRNGKK LTTVQGLKKE+SYE+ILK
Sbjct: 1   MVELDIQIPSAYDPFAEAKDSDAPGAKENIHIRIQQRNGKKSLTTVQGLKKEYSYERILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRK VSQFLVQ G+ KKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQTGIAKKDQIKIHGF 112

[Close]

BLAST of Csor.00g037280 vs. TAIR 10
Match: AT4G27130.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 183.7 bits (465), Expect = 8.0e-47
Identity = 91/113 (80.53%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDA-PGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M ELD Q+P+AFDPFADA   D+  GTK YVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of Csor.00g037280 vs. TAIR 10
Match: AT5G54760.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 183.3 bits (464), Expect = 1.0e-46
Identity = 91/113 (80.53%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDA-PGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M ELD Q+P+AFDPFADA   D+  GTK YVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of Csor.00g037280 vs. TAIR 10
Match: AT5G54760.2 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 183.3 bits (464), Expect = 1.0e-46
Identity = 91/113 (80.53%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDA-PGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M ELD Q+P+AFDPFADA   D+  GTK YVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

The following BLAST results are available for this feature:

BLAST of Csor.00g037280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P41568	1.1e-45	80.53	Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At4...	[more]
Q9SQF4	3.3e-45	79.65	Protein translation factor SUI1 homolog OS=Brassica oleracea OX=3712 PE=3 SV=1	[more]
Q94JV4	4.3e-45	78.76	Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]
P56330	2.8e-44	75.65	Protein translation factor SUI1 homolog OS=Zea mays OX=4577 GN=TIF PE=3 SV=1	[more]
A6MZM2	2.8e-44	75.65	Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica OX=39946 G...	[more]

BLAST of Csor.00g037280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022976609.1	5.97e-74	100.00	protein translation factor SUI1 homolog 1 [Cucurbita maxima] >XP_022976610.1 pro...	[more]
XP_023536045.1	1.71e-73	99.11	protein translation factor SUI1 homolog 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022936190.1	1.71e-73	99.11	protein translation factor SUI1 homolog 1 [Cucurbita moschata]	[more]
XP_004139787.1	3.46e-73	99.11	protein translation factor SUI1 homolog 1 [Cucumis sativus] >XP_008447738.1 PRED...	[more]
KAA0025154.1	1.21e-72	99.11	SUI1 domain-containing protein [Cucumis melo var. makuwa] >TYK23112.1 SUI1 domai...	[more]

BLAST of Csor.00g037280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IJY4	2.89e-74	100.00	protein translation factor SUI1 homolog 1 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1FCX8	8.29e-74	99.11	protein translation factor SUI1 homolog 1 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A0A0K771	1.67e-73	99.11	SUI1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G209580 PE=3 S...	[more]
A0A1S3BI45	1.67e-73	99.11	protein translation factor SUI1 homolog 1-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5D3DHR8	5.85e-73	99.11	SUI1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Csor.00g037280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54940.1	8.3e-52	84.82	Translation initiation factor SUI1 family protein	[more]
AT5G54940.2	8.3e-52	84.82	Translation initiation factor SUI1 family protein	[more]
AT4G27130.1	8.0e-47	80.53	Translation initiation factor SUI1 family protein	[more]
AT5G54760.1	1.0e-46	80.53	Translation initiation factor SUI1 family protein	[more]
AT5G54760.2	1.0e-46	80.53	Translation initiation factor SUI1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005874	Eukaryotic translation initiation factor SUI1	TIGRFAM	TIGR01160	TIGR01160	coord: 7..112 e-value: 3.3E-52 score: 173.7
IPR005874	Eukaryotic translation initiation factor SUI1	PIRSF	PIRSF004499	Transl_init_SUI1_Euk	coord: 1..112 e-value: 4.9E-47 score: 156.8
IPR005874	Eukaryotic translation initiation factor SUI1	CDD	cd11566	eIF1_SUI1	coord: 29..111 e-value: 1.21219E-47 score: 145.37
None	No IPR available	GENE3D	3.30.780.10		coord: 2..112 e-value: 2.1E-45 score: 156.0
None	No IPR available	PANTHER	PTHR10388:SF56	BNAA10G09260D PROTEIN	coord: 1..112
None	No IPR available	PANTHER	PTHR10388	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1	coord: 1..112
IPR001950	SUI1 domain	PFAM	PF01253	SUI1	coord: 27..101 e-value: 4.5E-24 score: 84.7
IPR001950	SUI1 domain	PROSITE	PS50296	SUI1	coord: 30..100 score: 22.770058
IPR036877	SUI1 domain superfamily	SUPERFAMILY	55159	eIF1-like	coord: 4..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g037280.m01	Csor.00g037280.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
molecular_function	GO:0003743	translation initiation factor activity