Csor.00g037000 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTTCTCGATGATGAGTTCTTCAGGATGTGAAATTTTGGTGCGAAATTCTCACCAGAAGACTGTGAAGTGCCAATTGTTCCATGAAAGAGAGAAGAAGATGGTGCTCAAATTCTCCAAGTCTCGGATTAACCCTACGAGAGCTCTGCTTAGCAGGCATGAAGCAATTGAGTTTGAAGAGAGGACAAGTCCCATCGAGGTGCTTTCAAATTCTAGCAACTTTTTGGATCTTGCATTCGTTTCTTATGAAAATTCATGGTTATTTTGATTTACATTTGATTTGATGATATCTGAACGTCGAGATCCATGGAATTCAGAAGAAACTACTGTAATTGTCTGTTGATTTCTCCATTTTTTTTTTTTAATTTTTTGGTTCTGCAGTTCAATTGGAGGTTTTAGATTTTGAGTGATCTCAGTTAAAAGCTAAGAGATCATGATCAAATTGGTTCTTTCTACCAATGTGTCTTTACCTGTTTTGCTTGTTCCTTGTAGAAAGGAAATCAAATAGTTTTCAAGGATATGTGGGCGTTGGAGGTTGGGGGATTCAAACATATGAGGTATTGGGACAAGAAGATATGTTTTAACTAGTTGTGTTATGCTTAGACCTATTGATCTAGTTGTACTTAACGCTTCAAAATTTTGATGACTCGATCTCCCCGTCTTGGGTGAATGAGAGGATACATCTCGGTCACTAGAGAGAATAGGGAAATATCATAATTCAACTACTAGGATAAGGAGTTTTAGAATGTATGAGATCTCACATTGGTTGGAGAGAGGAATGAAGCATTCCTTATAAAGGTGTGGAAACCTCTCCCTACTGGCGTTTTAAAACCTTGAGGGGAAGCCCTTAAAGGGAAAGTCCAAGGAGGATAATATCTGTTAGCGGTGGGCTTGGGTTGTTACAAATGGTATTAGAACCAGACACCGGACAGCGTGCCAGCGAGGACGCTTGACCCACAAGGAGGTGGATTATGAGATCCCACATAGGTTGGAGAGGGGAACAAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCTTAGCAGACGCATTTTAAAACCTTGAAGGGAAACCCCAAAGAGGACAATATCTGTTAGCAGTGAGCTTGGGCTATTACAAATAGTATTAGAGTCAAATACCGGGCAATGTGCCAGCAAGGACGCTTGGCCCTCAAGGGGAGTGGATTGTGAGATCCCACATCGGTTAGAGAGGGGAACGAAGCATTCCTTATAAGGGTGAACTTCTCCCTAGCAAACACATTTTAAAACCTTGAGGGGTAGCCCTTGAAAGGAAAGTTCAAAGAGGACAATATTTACTAGTGGTGGATCTGAACTGTTGGTAACATGCATGGTCATGTTTTCCTTTTGTTCGAAATGTGTATTTCGCATAGATCAAAGTTATTTGCTCACTACACAAAGAGATTGAATAGTTCTTGTAAGGGAGGCCACTGTTTCCTCTTTTCTGTGTGGTGGCGGGCATCAGTTGTGCATCTTGGATATCTCAGTTGTATTCTTATCTGTTATGCTAGTGAGTTTCTCTTTTATGGTCAAAACATCTTGTAATTTTAACCATAAAGTGTCGATTTCATCATGTTGAATCGTAAACTTGAACGGGGAGGAAAATAATGCCCTCTTGTAGTCGAGTTACTGTTTCTTAGAGATTTGTGTTCGGGTTTACGTTTAAGTGTTCCAATGACAATGACAATGGCTAGATCCCAAGTTTTATGGCTATGTTTAGTGTTTATTGTGGCTGGGTTTGAGCGTTTTAGGTGTTGGTATTGACATTTTTTTTGTGCCCTTTTGTGACTATTTGGCTTCTGGAATTCTCTAACTTGATTTAAACTTGTTCTGATTGAGGATTTGAACATTGTTTTCCCTTGTCTAAGAGTTCTTTGTTTATTGTCTTCTACTATACTCAAGGTCAGAACAGAGTTAGCAAAATGCTATGAATTGATAAACAGACTAGGCAAAGGAGTTGTTTATCTTGGATCTTCAAGGATGGGACCGGATCATGCTCATTATAAGCAGGCGTTCGAGTTGAGTAGAGAGGTAAGATGTTTCTCCATCTTTTATATTGAAGTTAAGAGGAAAGTTCACGATGATGAACCGTTCAGTACCACGGTTCGACCCTTTCAATCTGAGGTGAATGTTCGAGGAACGGAACATCAAAACTTAGATGCATACTTAGTTATGTAACAGCCCAAGCTCACCGCTAGTAGATATTGTCCTCTTTGGGCTTTCTTTTCTGAGCTTTCCCTCAAGGTTTTAGAACCAATCCATAGTGAGAGGTTTCCACGTCCTTATAAGGATTGTTTCGTTCCACTCTCTAACCAATGTGAAACATTACTTATAAGGGTGTGGAAACCTCTCACTACCAAGCGTGTTTTAAAACCATGAGGCTGACGGCGATACGTAACGGGCCAAAGCGGACAATGTTAGCTAGCGGTTGGCTTGGGCTATTACAAATGATATTAGAGCCAGACACTGGGCAATGTGCTAGCAAGGACTTTAGGCCCCCAAGGGGGATGGATTGTGAGATCGCACATTGGTTGGAGAGGGGAACAAAACATTCCTTATAAAAGTGTGGAAACCTCTCAGTAACAGACGCATTTTAAAACTGTGAGGCTGACGACGATACATAATGGGCCAAAGCAGACAATATCTGCTAGCGGTAGGCTTGGGCTGCTACAAATGGTATCAGAGTCAGACACCGGGCGGTGTGCCAGCAAGGACGCTGGAACCTCAAGGGGGTGGATTGTGACATCTCACATCAGTTGGAGAGGGAAAAGAAACATTCCTTATAAGGGTGTGGAAATCTCTCCCTAGTAGACGCGTTTTAAATCCTTGAGGGGAAGCCCAGAAGGGAAAGTCCAAAGAGGACAATATCTACTAGCGATAGACTTGGGGGCTATTACATGTTAGGAACGAAGTAAAGAAAAAACAGATAGAGTTAATGCATAATCTTCAACTTTACGAGTCTTATCTTTTCAATCCCTGTAATACAGATTTCAGAACTTTTGGATTGCACGACTTGGTCAGGTGTCGGTCCGGGTCTTATGGACGCGGTTACGAAAGGTGCTATGCAGGCAGGAAATCCTGTAGGAGGATTCAAAATCGGTAGAGAATCTGGTGAATGGACATCCTCAAAGTTTCATCCATACTTACCTACAGAGACTTATTTTACTTGCAGGTGATATAGACATAGATCCTATAAGTTATCTGGTAGTACATAGCAAACACTGCACCCTCCCTGCTTGAACTACTCTATATAATGCAGGTTTTTCTCTGCAAGAAAACACGGTCTCGTCGACGCTGCAGTTAGAAGCTGTAGTTCTGATCGGACTGCTTTCGTTACACTCCCCGGCGGCATTGGTACTTTCGACGAGGTGTTTGAGATTCTAGCTTTGATTCAGCTCAGGAGAATAGGGTCAGAACTTCCAGTTCCCTTCCTGTTGATGAACTACGACTCTTTCTACTCGAAACTACTCGAGTTTTTCGATGATTGCGAAAACTGGGGTACCTTGGGGAAGGGCGAGGTCGACTCGCTTTGGAAGGTCTGTGACAATAACGCCGAGGCCGTGGCGTACTTGACCAACTTTTACAATGTGTCTTCATGA ATGAGTTTCTCGATGATGAGTTCTTCAGGATGTGAAATTTTGGTGCGAAATTCTCACCAGAAGACTGTGAAGTGCCAATTGTTCCATGAAAGAGAGAAGAAGATGGTGCTCAAATTCTCCAAGTCTCGGATTAACCCTACGAGAGCTCTGCTTAGCAGGCATGAAGCAATTGAGTTTGAAGAGAGGACAAGTCCCATCGAGGTCAGAACAGAGTTAGCAAAATGCTATGAATTGATAAACAGACTAGGCAAAGGAGTTGTTTATCTTGGATCTTCAAGGATGGGACCGGATCATGCTCATTATAAGCAGGCGTTCGAGTTGAGTAGAGAGATTTCAGAACTTTTGGATTGCACGACTTGGTCAGGTGTCGGTCCGGGTCTTATGGACGCGGTTACGAAAGGTGCTATGCAGGCAGGAAATCCTGTAGGAGGATTCAAAATCGGTAGAGAATCTGGTGAATGGACATCCTCAAAGTTTCATCCATACTTACCTACAGAGACTTATTTTACTTGCAGGTTTTTCTCTGCAAGAAAACACGGTCTCGTCGACGCTGCAGTTAGAAGCTGTAGTTCTGATCGGACTGCTTTCGTTACACTCCCCGGCGGCATTGGTACTTTCGACGAGGTGTTTGAGATTCTAGCTTTGATTCAGCTCAGGAGAATAGGGTCAGAACTTCCAGTTCCCTTCCTGTTGATGAACTACGACTCTTTCTACTCGAAACTACTCGAGTTTTTCGATGATTGCGAAAACTGGGGTACCTTGGGGAAGGGCGAGGTCGACTCGCTTTGGAAGGTCTGTGACAATAACGCCGAGGCCGTGGCGTACTTGACCAACTTTTACAATGTGTCTTCATGA ATGAGTTTCTCGATGATGAGTTCTTCAGGATGTGAAATTTTGGTGCGAAATTCTCACCAGAAGACTGTGAAGTGCCAATTGTTCCATGAAAGAGAGAAGAAGATGGTGCTCAAATTCTCCAAGTCTCGGATTAACCCTACGAGAGCTCTGCTTAGCAGGCATGAAGCAATTGAGTTTGAAGAGAGGACAAGTCCCATCGAGGTCAGAACAGAGTTAGCAAAATGCTATGAATTGATAAACAGACTAGGCAAAGGAGTTGTTTATCTTGGATCTTCAAGGATGGGACCGGATCATGCTCATTATAAGCAGGCGTTCGAGTTGAGTAGAGAGATTTCAGAACTTTTGGATTGCACGACTTGGTCAGGTGTCGGTCCGGGTCTTATGGACGCGGTTACGAAAGGTGCTATGCAGGCAGGAAATCCTGTAGGAGGATTCAAAATCGGTAGAGAATCTGGTGAATGGACATCCTCAAAGTTTCATCCATACTTACCTACAGAGACTTATTTTACTTGCAGGTTTTTCTCTGCAAGAAAACACGGTCTCGTCGACGCTGCAGTTAGAAGCTGTAGTTCTGATCGGACTGCTTTCGTTACACTCCCCGGCGGCATTGGTACTTTCGACGAGGTGTTTGAGATTCTAGCTTTGATTCAGCTCAGGAGAATAGGGTCAGAACTTCCAGTTCCCTTCCTGTTGATGAACTACGACTCTTTCTACTCGAAACTACTCGAGTTTTTCGATGATTGCGAAAACTGGGGTACCTTGGGGAAGGGCGAGGTCGACTCGCTTTGGAAGGTCTGTGACAATAACGCCGAGGCCGTGGCGTACTTGACCAACTTTTACAATGTGTCTTCATGA MSFSMMSSSGCEILVRNSHQKTVKCQLFHEREKKMVLKFSKSRINPTRALLSRHEAIEFEERTSPIEVRTELAKCYELINRLGKGVVYLGSSRMGPDHAHYKQAFELSREISELLDCTTWSGVGPGLMDAVTKGAMQAGNPVGGFKIGRESGEWTSSKFHPYLPTETYFTCRFFSARKHGLVDAAVRSCSSDRTAFVTLPGGIGTFDEVFEILALIQLRRIGSELPVPFLLMNYDSFYSKLLEFFDDCENWGTLGKGEVDSLWKVCDNNAEAVAYLTNFYNVSS Homology
BLAST of Csor.00g037000 vs. ExPASy Swiss-Prot
Match: Q84M85 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL5 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL5 PE=2 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 2.2e-05 Identity = 51/195 (26.15%), Postives = 82/195 (42.05%), Query Frame = 0
BLAST of Csor.00g037000 vs. ExPASy Swiss-Prot
Match: Q7XDB8 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL10 PE=2 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 4.9e-05 Identity = 45/167 (26.95%), Postives = 69/167 (41.32%), Query Frame = 0
BLAST of Csor.00g037000 vs. ExPASy Swiss-Prot
Match: Q851C7 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL4 PE=3 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 2.4e-04 Identity = 29/83 (34.94%), Postives = 42/83 (50.60%), Query Frame = 0
BLAST of Csor.00g037000 vs. ExPASy Swiss-Prot
Match: Q0JBP5 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL6 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL6 PE=2 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 3.2e-04 Identity = 45/169 (26.63%), Postives = 70/169 (41.42%), Query Frame = 0
BLAST of Csor.00g037000 vs. ExPASy Swiss-Prot
Match: P47044 (LOG family protein YJL055W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YJL055W PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 3.2e-04 Identity = 24/50 (48.00%), Postives = 29/50 (58.00%), Query Frame = 0
BLAST of Csor.00g037000 vs. NCBI nr
Match: KAG6592073.1 (hypothetical protein SDJN03_14419, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024947.1 hypothetical protein SDJN02_13767 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 575 bits (1483), Expect = 3.57e-207 Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0
BLAST of Csor.00g037000 vs. NCBI nr
Match: XP_022935933.1 (uncharacterized protein LOC111442691 [Cucurbita moschata]) HSP 1 Score: 572 bits (1475), Expect = 5.92e-206 Identity = 283/284 (99.65%), Postives = 283/284 (99.65%), Query Frame = 0
BLAST of Csor.00g037000 vs. NCBI nr
Match: XP_023535152.1 (uncharacterized protein LOC111796668 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 568 bits (1463), Expect = 4.00e-204 Identity = 281/284 (98.94%), Postives = 282/284 (99.30%), Query Frame = 0
BLAST of Csor.00g037000 vs. NCBI nr
Match: XP_022977174.1 (uncharacterized protein LOC111477328 [Cucurbita maxima]) HSP 1 Score: 557 bits (1435), Expect = 7.42e-200 Identity = 276/284 (97.18%), Postives = 279/284 (98.24%), Query Frame = 0
BLAST of Csor.00g037000 vs. NCBI nr
Match: XP_038896186.1 (uncharacterized protein LOC120084471 isoform X1 [Benincasa hispida]) HSP 1 Score: 540 bits (1392), Expect = 4.46e-193 Identity = 265/282 (93.97%), Postives = 271/282 (96.10%), Query Frame = 0
BLAST of Csor.00g037000 vs. ExPASy TrEMBL
Match: A0A6J1FBW4 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111442691 PE=3 SV=1) HSP 1 Score: 572 bits (1475), Expect = 2.87e-206 Identity = 283/284 (99.65%), Postives = 283/284 (99.65%), Query Frame = 0
BLAST of Csor.00g037000 vs. ExPASy TrEMBL
Match: A0A6J1IQP9 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111477328 PE=3 SV=1) HSP 1 Score: 557 bits (1435), Expect = 3.59e-200 Identity = 276/284 (97.18%), Postives = 279/284 (98.24%), Query Frame = 0
BLAST of Csor.00g037000 vs. ExPASy TrEMBL
Match: A0A0A0LEH2 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis sativus OX=3659 GN=Csa_3G764560 PE=3 SV=1) HSP 1 Score: 536 bits (1381), Expect = 1.03e-191 Identity = 260/282 (92.20%), Postives = 274/282 (97.16%), Query Frame = 0
BLAST of Csor.00g037000 vs. ExPASy TrEMBL
Match: A0A1S3CI23 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis melo OX=3656 GN=LOC103501221 PE=3 SV=1) HSP 1 Score: 532 bits (1371), Expect = 3.43e-190 Identity = 259/282 (91.84%), Postives = 270/282 (95.74%), Query Frame = 0
BLAST of Csor.00g037000 vs. ExPASy TrEMBL
Match: A0A5A7U1S7 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G002260 PE=3 SV=1) HSP 1 Score: 530 bits (1365), Expect = 2.81e-189 Identity = 258/282 (91.49%), Postives = 269/282 (95.39%), Query Frame = 0
BLAST of Csor.00g037000 vs. TAIR 10
Match: AT1G50575.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 340.5 bits (872), Expect = 1.3e-93 Identity = 161/248 (64.92%), Postives = 201/248 (81.05%), Query Frame = 0
BLAST of Csor.00g037000 vs. TAIR 10
Match: AT2G35990.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 46.6 bits (109), Expect = 3.9e-05 Identity = 45/177 (25.42%), Postives = 68/177 (38.42%), Query Frame = 0
BLAST of Csor.00g037000 vs. TAIR 10
Match: AT3G53450.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 45.4 bits (106), Expect = 8.6e-05 Identity = 44/167 (26.35%), Postives = 67/167 (40.12%), Query Frame = 0
BLAST of Csor.00g037000 vs. TAIR 10
Match: AT4G35190.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 45.4 bits (106), Expect = 8.6e-05 Identity = 45/169 (26.63%), Postives = 68/169 (40.24%), Query Frame = 0
BLAST of Csor.00g037000 vs. TAIR 10
Match: AT5G06300.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 45.4 bits (106), Expect = 8.6e-05 Identity = 46/178 (25.84%), Postives = 69/178 (38.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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