Csor.00g035810 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCATGGTCAATGGAGTGAAATCATGCGCAAAGCTGCTGAAGTCATCAGAATCATTGTTGGTGAAATCAGGTTTTGTTACTTGCTAGCTAGCAATTTAGATTTACTAAACCTTACGTTTTACAATTTTTGCACATGATTTTAACTTGCTACAATTTTTTACAAATTCATAGCAGTGTAGTACTAGGTTTTTCTAAGACAGCTTTAAATAATGGGACAATCAAATCATGAATCAAAATGCAAGTAAACTGAAGGAGTTGTAAAAGAACGACAGTAACAAAAAAGAATCAGCTGAAAAAGACAACCAAGGATTATCAGAAAGTAAAATTTATGCGTAGGACACAATCTTAGAACTTTGTTGTTTTGGAAACGATGTAAATGTGTCTCTTCTAATGGAACATGAGTTTTTCTTCTATAGGAGGCAGTCTAACTTTTGTCTAGTTTTGAGTGGATCTCGCCTTACTTCCTCTCTTTGTTTAGGGCCCTTGTCTCAATCAACAAAAGATTAGAGAAGTTTATGAGTCATTTTGTATAGGAAGAATGACCGATGAGGGTAAAGGTGTAAATTTAGTCCAGTAGAAGGTGGTGTCCAAGTTGGTTGATTTTAAGGGGCTTAGGCATTGATAACTAGAGGGCTTGAGATGAAGTCTTGTTGGCTACATAGCATTTCCTCGGGAGATTGACATCTTGTGGTATAAGGTTATTGTTAGTAAGCATGGTCCACCTTCCAATGGTCCTCTAGCTAGGGTTTGAAAGGGTCCTCTAGAAATCTATGGAAAGCTACATTTGAGGGTTTTTCTGTTTTCAACGATGGGTCTGATACTTAAGTATACATGGAGGATAAGTCGTTGAGGTATAGACCCCCCTTTGCTCCAACTATACTCAATGAGGACTCATTTGATGATTTCAGTCTTACCTTCTTTTGGAAACTTCTCCACTCTTGCTCTTGGTTTTATTGTCCTTTGTTTGATAGTGGAACATAAGATATGTGGCTCTTGTGTCTTTGGTATGGTTTTTTTGTTAGTATGGGGAGAAATGATTCTCTGTCTTTGGTTCTGCAATTCTTTGGAAGGGCTTGCTTGTGTTTCATTTTCCGTAGTTGGGTGGATCTCTCTCTTTATAGGTTTCTTTCTTTTTCTGGCTGTTGAAGGACTAAATTTCTATGAATATCAATTTTTTTGCACCATAGCAATAGAGTCATTACTTTGGATTGCATCGTAGGTCCTTGGAGGGTATTGTAGAGTAGAATCCTTTTTCTCTCTTTATTTTTGTAACTCAGATGGGGATAAGGAGGGCCCTTTTTTTTGGGAGGATAAGTGATGGGGGATAAATCCCTTCGCTTTGTAGTCTGTAACTTATACTAGTTATATCGATGAGGGATCGTTTTGGTGTGGTAGTGTTGTCTTAGCCTTTGTCTCCTCTGTTGCTGGGTTTTGGTCGTCCTTTATCTGACAGGGAAATGCTAGATGTCATCAATCTCCTATCGATGACTGGGGACTTCCGTTGTAACTTTGTGGGAAGCTATGTTTGTATTTTGGAGTCCTTGTTCTTTTGAAGAGTTCTTGTGTAAATCCTTTTTTCTTTGTCATGTGAACCATTCTCCTTTGAGTGTTTGACTGGTTGTGGAAGGTGAAAATTTTGAAGATGGTTAAGTTCTTTTTTTTTTTTATCTAGAAGGTTCTCCATGGTAGAATCAATACCTTAGGTAGTGTTTTGAGGAGGGAACCCAACTTGGTGGGGCTTTGGTGTTGCTTCATTTGCAAGAGGGTGGCGGAGGAGGATCTGAGTCATATTCTTCGGTTGTGTAATGATGTGCTTACAGTTTAGAGCCGGTTGTTAGATGGGTTTGGTTTTAGTTTAACTAGATACAAAGGTTGCAGAGATATGACCGAGGAGTTTCTTCTTCACTCTCCTTCTTGCGAATAAGAAAGCTTTTTGTGGCATGCTGGGTGTGCACTATTATTTATGGGCTTTAGGGAGAAACAAACTAAAGAATTTTTAGAGGGTTTGAGAGGCTTTTGAGTGAGGTATGGTCCTGCATTAGGTTCAATGTTTTTCCGTGAGTGTATGTGACCAAGTTTTTCTTAAATTATCCATTGTGTTCTATTTATTTAGATTGTCTGTGAGTGTATGTGACTAAATTTTTCTTGATTTATCCATTAAGTTCTATATACTTAGGTCGGATACGGTTTTTATAGGTGTTGTGGGTTCTTTCTTTAGACCTATCTTTCATATTTTCTCTCAATGAAAGTTCGGTTTTTCATTAGAAACATTTAAATATTTTTATTTATTTACAATTCTGGTTTTAGCGATGGATGCTGGATTGCCTATTGCACACTAATGTTTCATCCAAAAAGTTCAATCACGTGTAGTAATGTCTATTGCGAAGCTTACTTCCAGTGGAAAATCATGCTGTCACATGTTTCAAAACTCCTTGTCATAAATAAATACTGCAAATTTGTTGAAGATTTTAGTTCTGGGTTCTGTCCCAACAAAATTTTGCCTCTTTGAAATTCTGGAGTAGTACAGAGTGGCCTCGTGTTATTAGTCTTCGAAGCATTGTTGCTTCTGATTAGGTAAAGTGTCCTTGACATTCGTTACCATCATCGATTTGGATCATATACTAGTGGTAGAAAGTTCATGTGATTTCAACCCTTGTTAGGCATGTATGGAACAATTATGATGGATATAAATAGTAACAAAGGACACAATTAATAAATCTTAGCATCAAAAGACATCGCTCATGTACTTTTTAGAATATAAATGTATAAGCATCTTCTTAAGTTTTCTGGTATGAAAATTATCCATTTGCACGATATTTTTGTGTTTCATAGATAACAATCTATCTATTTCTCCGAATTCATAATGGTCATGTATGAATCGAGGTTTCGAAATCCAAAAAATGATGGTTCAATGTGATCTCGTGCTGCAGCTAATCGAGGGATTCACTCAACTGGTGTGAAGAGAATGGGAGGACATGCTCATGGACATGATGAACCATACTATTTGCACGCCAAGCATATGTACAACTTGGACAGGATGAAACATCAGAAGCTGACCATGACGCTTGGAGTACTCACTGCATTCAGCATTGGTGTGGGCGTTCCAATCTTTGCAGTCGTCTTTCAGCAAAAGAAGACGGCCTCTGGATGA ATGGCCATGGTCAATGGAGTGAAATCATGCGCAAAGCTGCTGAAGTCATCAGAATCATTGTTGGTGAAATCAGCTAATCGAGGGATTCACTCAACTGGTGTGAAGAGAATGGGAGGACATGCTCATGGACATGATGAACCATACTATTTGCACGCCAAGCATATGTACAACTTGGACAGGATGAAACATCAGAAGCTGACCATGACGCTTGGAGTACTCACTGCATTCAGCATTGGTGTGGGCGTTCCAATCTTTGCAGTCGTCTTTCAGCAAAAGAAGACGGCCTCTGGATGA ATGGCCATGGTCAATGGAGTGAAATCATGCGCAAAGCTGCTGAAGTCATCAGAATCATTGTTGGTGAAATCAGCTAATCGAGGGATTCACTCAACTGGTGTGAAGAGAATGGGAGGACATGCTCATGGACATGATGAACCATACTATTTGCACGCCAAGCATATGTACAACTTGGACAGGATGAAACATCAGAAGCTGACCATGACGCTTGGAGTACTCACTGCATTCAGCATTGGTGTGGGCGTTCCAATCTTTGCAGTCGTCTTTCAGCAAAAGAAGACGGCCTCTGGATGA MAMVNGVKSCAKLLKSSESLLVKSANRGIHSTGVKRMGGHAHGHDEPYYLHAKHMYNLDRMKHQKLTMTLGVLTAFSIGVGVPIFAVVFQQKKTASG Homology
BLAST of Csor.00g035810 vs. NCBI nr
Match: KAG6592191.1 (hypothetical protein SDJN03_14537, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025047.1 hypothetical protein SDJN02_13870 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 194 bits (494), Expect = 1.58e-62 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of Csor.00g035810 vs. NCBI nr
Match: XP_023535876.1 (uncharacterized protein LOC111797174 [Cucurbita pepo subsp. pepo] >XP_023535877.1 uncharacterized protein LOC111797174 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 193 bits (491), Expect = 4.53e-62 Identity = 96/97 (98.97%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of Csor.00g035810 vs. NCBI nr
Match: XP_022936374.1 (uncharacterized protein LOC111443011 [Cucurbita moschata] >XP_022936375.1 uncharacterized protein LOC111443011 [Cucurbita moschata]) HSP 1 Score: 191 bits (484), Expect = 5.30e-61 Identity = 95/97 (97.94%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of Csor.00g035810 vs. NCBI nr
Match: XP_022976651.1 (uncharacterized protein LOC111476990 [Cucurbita maxima] >XP_022976652.1 uncharacterized protein LOC111476990 [Cucurbita maxima]) HSP 1 Score: 189 bits (480), Expect = 2.16e-60 Identity = 94/97 (96.91%), Postives = 96/97 (98.97%), Query Frame = 0
BLAST of Csor.00g035810 vs. NCBI nr
Match: XP_004138643.2 (uncharacterized protein LOC101217188 [Cucumis sativus] >KGN63316.2 hypothetical protein Csa_022386 [Cucumis sativus]) HSP 1 Score: 183 bits (464), Expect = 5.97e-58 Identity = 90/97 (92.78%), Postives = 94/97 (96.91%), Query Frame = 0
BLAST of Csor.00g035810 vs. ExPASy TrEMBL
Match: A0A6J1FDG6 (uncharacterized protein LOC111443011 OS=Cucurbita moschata OX=3662 GN=LOC111443011 PE=4 SV=1) HSP 1 Score: 191 bits (484), Expect = 2.57e-61 Identity = 95/97 (97.94%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of Csor.00g035810 vs. ExPASy TrEMBL
Match: A0A6J1IGC8 (uncharacterized protein LOC111476990 OS=Cucurbita maxima OX=3661 GN=LOC111476990 PE=4 SV=1) HSP 1 Score: 189 bits (480), Expect = 1.05e-60 Identity = 94/97 (96.91%), Postives = 96/97 (98.97%), Query Frame = 0
BLAST of Csor.00g035810 vs. ExPASy TrEMBL
Match: A0A0A0LQ20 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G403690 PE=4 SV=1) HSP 1 Score: 181 bits (458), Expect = 2.38e-57 Identity = 89/97 (91.75%), Postives = 93/97 (95.88%), Query Frame = 0
BLAST of Csor.00g035810 vs. ExPASy TrEMBL
Match: A0A1S3B3R2 (uncharacterized protein LOC103485430 OS=Cucumis melo OX=3656 GN=LOC103485430 PE=4 SV=1) HSP 1 Score: 179 bits (454), Expect = 9.70e-57 Identity = 88/96 (91.67%), Postives = 93/96 (96.88%), Query Frame = 0
BLAST of Csor.00g035810 vs. ExPASy TrEMBL
Match: A0A6J1EHC8 (uncharacterized protein LOC111433382 OS=Cucurbita moschata OX=3662 GN=LOC111433382 PE=4 SV=1) HSP 1 Score: 173 bits (439), Expect = 1.88e-54 Identity = 84/97 (86.60%), Postives = 92/97 (94.85%), Query Frame = 0
BLAST of Csor.00g035810 vs. TAIR 10
Match: AT1G72020.1 (unknown protein; Has 52 Blast hits to 52 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 125.6 bits (314), Expect = 2.2e-29 Identity = 62/97 (63.92%), Postives = 76/97 (78.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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